Rh1CG249200

Protein of unknown function (DUF2439)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
51157869 .. 51171120
13252 bp
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UTR
Exon/CDS
Intron
Rh1CG249200.1

Sequence Viewer

Length: 183 bp
ATGGAACTACTAACTCAAAAGGCGAAGAAGTATCATGATGGTTTCTTGCAACTAGCAATTACTAGGTCTCATGGAAAGCAGGGAAGCAGTTTTTTTAAAAAGAAAAAGTGGATCTTTTCTTTCCTCCAGATTTTGCAGATGATTTCCCAGTTGCCATGCAGTTTTCTGGTTTTCGGGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

60

Amino Acids

7.01

Weight (kDa)

10.18

Isoelectric Point (pI)

42.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 119
Alw26I GTCTC 1 cut(s) 72
AlwI GGATC 1 cut(s) 119
BccI CCATC 1 cut(s) 32
BcoDI GTCTC 1 cut(s) 72
BfaI CTAG 2 cut(s) 53, 63
BmrI ACTGGG 1 cut(s) 142
BmuI ACTGGG 1 cut(s) 142
BpmI CTGGAG 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 72
Bse1I ACTGG 1 cut(s) 148
BseNI ACTGG 1 cut(s) 148
BsmAI GTCTC 1 cut(s) 72
Bso31I GGTCTC 1 cut(s) 72
Bsp143I GATC 1 cut(s) 111
BspHI TCATGA 1 cut(s) 34
BspPI GGATC 1 cut(s) 119
BspTNI GGTCTC 1 cut(s) 72
BsrI ACTGG 1 cut(s) 148
BssMI GATC 1 cut(s) 111
BstKTI GATC 1 cut(s) 114
BstMAI GTCTC 1 cut(s) 72
BstMBI GATC 1 cut(s) 111
BstX2I RGATCY 1 cut(s) 111
BstYI RGATCY 1 cut(s) 111
CciI TCATGA 1 cut(s) 34
CviAII CATG 3 cut(s) 35, 71, 156
DpnI GATC 1 cut(s) 113
DpnII GATC 1 cut(s) 111
DraI TTTAAA 1 cut(s) 97
Eco31I GGTCTC 1 cut(s) 72
FaeI CATG 3 cut(s) 38, 74, 159
FaiI YATR 3 cut(s) 36, 72, 157
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FatI CATG 3 cut(s) 34, 70, 155
FspBI CTAG 2 cut(s) 53, 63
GsuI CTGGAG 1 cut(s) 110
Hin1II CATG 3 cut(s) 38, 74, 159
Hpy188III TCNNGA 3 cut(s) 35, 127, 175
HpyCH4V TGCA 3 cut(s) 49, 136, 159
Hsp92II CATG 3 cut(s) 38, 74, 159
Kzo9I GATC 1 cut(s) 111
LpnPI CCDG 4 cut(s) 65, 140, 152, 161
MaeI CTAG 2 cut(s) 53, 63
MalI GATC 1 cut(s) 113
MboI GATC 1 cut(s) 111
MboII GAAGA 1 cut(s) 37
MflI RGATCY 1 cut(s) 111
MluCI AATT 1 cut(s) 57
MnlI CCTC 1 cut(s) 134
MseI TTAA 1 cut(s) 96
NdeII GATC 1 cut(s) 111
NlaIII CATG 3 cut(s) 38, 74, 159
PagI TCATGA 1 cut(s) 34
PsuI RGATCY 1 cut(s) 111
SaqAI TTAA 1 cut(s) 96
Sau3AI GATC 1 cut(s) 111
SetI ASST 1 cut(s) 68
Sse9I AATT 1 cut(s) 57
SspMI CTAG 2 cut(s) 53, 63
TasI AATT 1 cut(s) 57
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
XspI CTAG 2 cut(s) 53, 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.