RchiOBHm_Chr5g0057801

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
61943756 .. 61946405
2650 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 174 bp
ATGGAAGCAAATTCTGTTGGGATTGGGAAGGCTCAGAAAGATACAAGTCCAACTACACTTTCATGGTTCTTCTGCATGCTCGATATAACTGATGCAGCTCTCGAACAAATGCATCATCTTCACGCTGCTCTAACTGAGATTTTGAGGCTATATCCTGCAGTTCCTCTGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

57

Amino Acids

6.3

Weight (kDa)

5.3

Isoelectric Point (pI)

52.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 10
AjuI GAANNNNNNNTTGG 2 cut(s) 43, 75
AluBI AGCT 1 cut(s) 98
AluI AGCT 1 cut(s) 98
ApeKI GCWGC 2 cut(s) 95, 125
ApoI RAATTY 1 cut(s) 10
BbvI GCAGC 2 cut(s) 107, 112
BfmI CTRYAG 1 cut(s) 156
BisI GCNGC 2 cut(s) 96, 126
BlsI GCNGC 2 cut(s) 97, 127
BmsI GCATC 2 cut(s) 82, 121
BseMII CTCAG 2 cut(s) 47, 126
BseXI GCAGC 2 cut(s) 107, 112
BspCNI CTCAG 2 cut(s) 46, 127
BspMAI CTGCAG 1 cut(s) 160
BstC8I GCNNGC 1 cut(s) 77
BstDEI CTNAG 2 cut(s) 33, 135
BstNSI RCATGY 1 cut(s) 79
BstSFI CTRYAG 1 cut(s) 156
BstV1I GCAGC 2 cut(s) 107, 112
Cac8I GCNNGC 1 cut(s) 77
CviAII CATG 2 cut(s) 63, 76
CviJI RGCY 3 cut(s) 32, 98, 148
CviKI_1 RGCY 3 cut(s) 32, 98, 148
DdeI CTNAG 2 cut(s) 33, 135
EcoT22I ATGCAT 1 cut(s) 114
FaeI CATG 2 cut(s) 66, 79
FaiI YATR 4 cut(s) 64, 77, 86, 151
FatI CATG 2 cut(s) 62, 75
Fnu4HI GCNGC 2 cut(s) 96, 126
Fsp4HI GCNGC 2 cut(s) 96, 126
GluI GCNGC 2 cut(s) 96, 126
Hin1II CATG 2 cut(s) 66, 79
Hpy188I TCNGA 1 cut(s) 36
Hpy188III TCNNGA 1 cut(s) 101
HpyAV CCTTC 1 cut(s) 22
HpyCH4V TGCA 4 cut(s) 75, 95, 112, 158
HpyF3I CTNAG 2 cut(s) 33, 135
Hsp92II CATG 2 cut(s) 66, 79
LpnPI CCDG 2 cut(s) 152, 168
Lsp1109I GCAGC 2 cut(s) 107, 112
LweI GCATC 2 cut(s) 82, 121
MboII GAAGA 2 cut(s) 61, 110
MluCI AATT 1 cut(s) 10
MmeI TCCRAC 1 cut(s) 74
MnlI CCTC 2 cut(s) 138, 174
Mph1103I ATGCAT 1 cut(s) 114
MslI CAYNNNNRTG 1 cut(s) 61
NlaIII CATG 2 cut(s) 66, 79
NsiI ATGCAT 1 cut(s) 114
NspI RCATGY 1 cut(s) 79
PaeI GCATGC 1 cut(s) 79
PkrI GCNGC 2 cut(s) 97, 127
PstI CTGCAG 1 cut(s) 160
RseI CAYNNNNRTG 1 cut(s) 61
SatI GCNGC 2 cut(s) 96, 126
SetI ASST 1 cut(s) 100
SfaNI GCATC 2 cut(s) 82, 121
SfcI CTRYAG 1 cut(s) 156
SgeI CNNG 7 cut(s) 57, 75, 88, 92, 113, 134, 167
SmiMI CAYNNNNRTG 1 cut(s) 61
SphI GCATGC 1 cut(s) 79
Sse9I AATT 1 cut(s) 10
TaqI TCGA 2 cut(s) 81, 102
TasI AATT 1 cut(s) 10
TseI GCWGC 2 cut(s) 95, 125
TspDTI ATGAA 1 cut(s) 51
XapI RAATTY 1 cut(s) 10
XceI RCATGY 1 cut(s) 79
Zsp2I ATGCAT 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.