Rroxscaffold_7G00196140

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Forward (+)
38809062 .. 38814971
5910 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_7G00196140.1

Sequence Viewer

Length: 309 bp
ATGGGACACTTGAAGTTAGGGAAAACAAAATTCTTGTTGCTAAAACTGGTTCGGCAAGCAAGAGGCGACGTAGTACCAAGACCGTTAAAAGTGCAGAAATCATCATTTAACGGTGGTATAGCGTGCGGGAGGTTCAAAAGTCATGTTATGCAGCCTCTAGTGTCCAAAGTTCCGGTAATGGTAGTAGAAGGGGACAATGAGATTGAGAAACGGGCTAGAAATCAAATGTTTGCTGCTGAAACAATTGGGACGGAACCCTTCAAGGAGAAACGACTAAGGAGAGATTTGCTCAAGGAAAGATCCGAGTGA

Protein Analysis

102

Amino Acids

11.6

Weight (kDa)

10.43

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 126
AclWI GGATC 1 cut(s) 294
AcsI RAATTY 1 cut(s) 29
AfaI GTAC 1 cut(s) 75
AgsI TTSAA 3 cut(s) 13, 136, 262
AlwI GGATC 1 cut(s) 294
ApeKI GCWGC 2 cut(s) 151, 233
ApoI RAATTY 1 cut(s) 29
BbvI GCAGC 2 cut(s) 163, 220
BfaI CTAG 2 cut(s) 158, 216
BisI GCNGC 2 cut(s) 152, 234
BlsI GCNGC 2 cut(s) 153, 235
BmiI GGNNCC 1 cut(s) 255
BplI GAGNNNNNCTC 2 cut(s) 273, 305
BpuEI CTTGAG 1 cut(s) 275
BsaWI WCCGGW 1 cut(s) 172
Bse1I ACTGG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 51
BseXI GCAGC 2 cut(s) 163, 220
BsgI GTGCAG 1 cut(s) 113
BsiSI CCGG 1 cut(s) 173
BslFI GGGAC 3 cut(s) 18, 206, 262
BsmFI GGGAC 3 cut(s) 18, 206, 262
Bsp143I GATC 1 cut(s) 299
BspACI CCGC 1 cut(s) 126
BspLI GGNNCC 1 cut(s) 255
BspPI GGATC 1 cut(s) 294
BsrI ACTGG 1 cut(s) 51
BssMI GATC 1 cut(s) 299
Bst4CI ACNGT 2 cut(s) 84, 113
BstC8I GCNNGC 2 cut(s) 57, 124
BstDEI CTNAG 1 cut(s) 275
BstKTI GATC 1 cut(s) 302
BstMBI GATC 1 cut(s) 299
BstV1I GCAGC 2 cut(s) 163, 220
BstX2I RGATCY 1 cut(s) 299
BstYI RGATCY 1 cut(s) 299
Cac8I GCNNGC 2 cut(s) 57, 124
Csp6I GTAC 1 cut(s) 74
CviAII CATG 1 cut(s) 143
CviJI RGCY 2 cut(s) 154, 215
CviKI_1 RGCY 2 cut(s) 154, 215
CviQI GTAC 1 cut(s) 74
DdeI CTNAG 1 cut(s) 275
DpnI GATC 1 cut(s) 301
DpnII GATC 1 cut(s) 299
FaeI CATG 1 cut(s) 146
FaiI YATR 3 cut(s) 119, 144, 149
FaqI GGGAC 3 cut(s) 18, 206, 262
FatI CATG 1 cut(s) 142
FauI CCCGC 1 cut(s) 119
Fnu4HI GCNGC 2 cut(s) 152, 234
Fsp4HI GCNGC 2 cut(s) 152, 234
FspBI CTAG 2 cut(s) 158, 216
GluI GCNGC 2 cut(s) 152, 234
HapII CCGG 1 cut(s) 173
Hin1II CATG 1 cut(s) 146
HpaII CCGG 1 cut(s) 173
Hpy188I TCNGA 1 cut(s) 304
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 2 cut(s) 182, 268
HpyCH4III ACNGT 2 cut(s) 84, 113
HpyCH4IV ACGT 1 cut(s) 69
HpyCH4V TGCA 2 cut(s) 94, 151
HpyF3I CTNAG 1 cut(s) 275
HpySE526I ACGT 1 cut(s) 69
Hsp92II CATG 1 cut(s) 146
Kzo9I GATC 1 cut(s) 299
LpnPI CCDG 2 cut(s) 32, 186
Lsp1109I GCAGC 2 cut(s) 163, 220
MaeI CTAG 2 cut(s) 158, 216
MaeII ACGT 1 cut(s) 69
MalI GATC 1 cut(s) 301
MboI GATC 1 cut(s) 299
MfeI CAATTG 1 cut(s) 243
MflI RGATCY 1 cut(s) 299
MluCI AATT 2 cut(s) 29, 243
MnlI CCTC 3 cut(s) 56, 123, 165
MseI TTAA 2 cut(s) 86, 108
MspI CCGG 1 cut(s) 173
MunI CAATTG 1 cut(s) 243
NdeII GATC 1 cut(s) 299
NlaIII CATG 1 cut(s) 146
NlaIV GGNNCC 1 cut(s) 255
PkrI GCNGC 2 cut(s) 153, 235
PspN4I GGNNCC 1 cut(s) 255
PsuI RGATCY 1 cut(s) 299
RsaI GTAC 1 cut(s) 75
RsaNI GTAC 1 cut(s) 74
SaqAI TTAA 2 cut(s) 86, 108
SatI GCNGC 2 cut(s) 152, 234
Sau3AI GATC 1 cut(s) 299
SetI ASST 2 cut(s) 72, 134
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
Sse9I AATT 2 cut(s) 29, 243
SsiI CCGC 1 cut(s) 126
SspMI CTAG 2 cut(s) 158, 216
TaaI ACNGT 2 cut(s) 84, 113
TaiI ACGT 1 cut(s) 72
TasI AATT 2 cut(s) 29, 243
Tru1I TTAA 2 cut(s) 86, 108
Tru9I TTAA 2 cut(s) 86, 108
TseI GCWGC 2 cut(s) 151, 233
TspGWI ACGGA 1 cut(s) 266
XapI RAATTY 1 cut(s) 29
XspI CTAG 2 cut(s) 158, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.