Transglutaminase-like superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19160 AT4G19160 AT4G19160 AT4G19160 |
| fragaria_vesca | FvH4_2g37180 FvH4_2g37220 |
| prunus_persica | Prupe.1G352900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0402301 RchiOBHm_Chr6g0304491 |
| rosa_laevigata | RLG00000006643 RLG00000010972 RLG00000033770 RLG00000034679 |
| rosa_multiflora | Rmu_ssc0000218.1_g000055 |
| rosa_roxburghii | Rroxscaffold_7G00163700 |
| rosa_rugosa | Rorug06G0332200 Rorug06G0332300 Rorug06G0332400 |
| rosa_samantha | Rh4BG074000 Rh5CG116700 Rh6AG445000 Rh6BG457400 Rh6CG457700 Rh6DG444500 |
| rosa_wichuraiana | Rw6G038630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 205 |
| AciI | CCGC | 1 cut(s) | 62 |
| AclWI | GGATC | 1 cut(s) | 37 |
| AcoI | YGGCCR | 2 cut(s) | 59, 168 |
| AcsI | RAATTY | 2 cut(s) | 47, 353 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 68 |
| AgsI | TTSAA | 3 cut(s) | 91, 204, 288 |
| AluBI | AGCT | 4 cut(s) | 85, 137, 292, 348 |
| AluI | AGCT | 4 cut(s) | 85, 137, 292, 348 |
| Alw26I | GTCTC | 1 cut(s) | 141 |
| AlwI | GGATC | 1 cut(s) | 37 |
| Ama87I | CYCGRG | 1 cut(s) | 33 |
| AoxI | GGCC | 2 cut(s) | 59, 168 |
| ApoI | RAATTY | 2 cut(s) | 47, 353 |
| AvaI | CYCGRG | 1 cut(s) | 33 |
| BalI | TGGCCA | 1 cut(s) | 170 |
| BcoDI | GTCTC | 1 cut(s) | 141 |
| BfuAI | ACCTGC | 1 cut(s) | 205 |
| BisI | GCNGC | 1 cut(s) | 62 |
| BlsI | GCNGC | 1 cut(s) | 63 |
| BmeT110I | CYCGRG | 1 cut(s) | 33 |
| BpuEI | CTTGAG | 1 cut(s) | 149 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 68 |
| Bse1I | ACTGG | 1 cut(s) | 194 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 68 |
| BseMII | CTCAG | 1 cut(s) | 253 |
| BseNI | ACTGG | 1 cut(s) | 194 |
| BseRI | GAGGAG | 2 cut(s) | 95, 284 |
| BshFI | GGCC | 2 cut(s) | 61, 170 |
| BsiHKCI | CYCGRG | 1 cut(s) | 33 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 68 |
| BsmAI | GTCTC | 1 cut(s) | 141 |
| BsnI | GGCC | 2 cut(s) | 61, 170 |
| BsoBI | CYCGRG | 1 cut(s) | 33 |
| Bsp143I | GATC | 3 cut(s) | 29, 54, 206 |
| BspACI | CCGC | 1 cut(s) | 62 |
| BspANI | GGCC | 2 cut(s) | 61, 170 |
| BspCNI | CTCAG | 1 cut(s) | 252 |
| BspHI | TCATGA | 2 cut(s) | 214, 259 |
| BspMI | ACCTGC | 1 cut(s) | 205 |
| BspPI | GGATC | 1 cut(s) | 37 |
| BsrI | ACTGG | 1 cut(s) | 194 |
| BssMI | GATC | 3 cut(s) | 29, 54, 206 |
| Bst4CI | ACNGT | 1 cut(s) | 120 |
| BstDEI | CTNAG | 2 cut(s) | 239, 316 |
| BstKTI | GATC | 3 cut(s) | 32, 57, 209 |
| BstMAI | GTCTC | 1 cut(s) | 141 |
| BstMBI | GATC | 3 cut(s) | 29, 54, 206 |
| BstNSI | RCATGY | 1 cut(s) | 248 |
| BstX2I | RGATCY | 1 cut(s) | 29 |
| BstYI | RGATCY | 1 cut(s) | 29 |
| BsuRI | GGCC | 2 cut(s) | 61, 170 |
| BtsIMutI | CAGTG | 2 cut(s) | 116, 187 |
| BveI | ACCTGC | 1 cut(s) | 205 |
| CciI | TCATGA | 2 cut(s) | 214, 259 |
| CviAII | CATG | 3 cut(s) | 215, 245, 260 |
| CviJI | RGCY | 9 cut(s) | 8, 61, 85, 127, 137, 170, 184, 292, 348 |
| CviKI_1 | RGCY | 9 cut(s) | 8, 61, 85, 127, 137, 170, 184, 292, 348 |
| DdeI | CTNAG | 2 cut(s) | 239, 316 |
| DpnI | GATC | 3 cut(s) | 31, 56, 208 |
| DpnII | GATC | 3 cut(s) | 29, 54, 206 |
| EaeI | YGGCCR | 2 cut(s) | 59, 168 |
| Eco32I | GATATC | 1 cut(s) | 74 |
| Eco88I | CYCGRG | 1 cut(s) | 33 |
| EcoRV | GATATC | 1 cut(s) | 74 |
| FaeI | CATG | 3 cut(s) | 218, 248, 263 |
| FaiI | YATR | 5 cut(s) | 24, 216, 246, 261, 342 |
| FatI | CATG | 3 cut(s) | 214, 244, 259 |
| Fnu4HI | GCNGC | 1 cut(s) | 62 |
| Fsp4HI | GCNGC | 1 cut(s) | 62 |
| GluI | GCNGC | 1 cut(s) | 62 |
| HaeIII | GGCC | 2 cut(s) | 61, 170 |
| Hin1II | CATG | 3 cut(s) | 218, 248, 263 |
| HincII | GTYRAC | 1 cut(s) | 228 |
| HindII | GTYRAC | 1 cut(s) | 228 |
| Hpy166II | GTNNAC | 2 cut(s) | 228, 250 |
| Hpy188I | TCNGA | 2 cut(s) | 19, 100 |
| Hpy188III | TCNNGA | 5 cut(s) | 33, 77, 204, 215, 260 |
| Hpy8I | GTNNAC | 2 cut(s) | 228, 250 |
| HpyCH4III | ACNGT | 1 cut(s) | 120 |
| HpyF3I | CTNAG | 2 cut(s) | 239, 316 |
| Hsp92II | CATG | 3 cut(s) | 218, 248, 263 |
| Kzo9I | GATC | 3 cut(s) | 29, 54, 206 |
| LmnI | GCTCC | 2 cut(s) | 82, 297 |
| LpnPI | CCDG | 7 cut(s) | 43, 54, 90, 108, 175, 210, 226 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 3 cut(s) | 31, 56, 208 |
| MboI | GATC | 3 cut(s) | 29, 54, 206 |
| MboII | GAAGA | 1 cut(s) | 56 |
| MflI | RGATCY | 1 cut(s) | 29 |
| MlsI | TGGCCA | 1 cut(s) | 170 |
| MluCI | AATT | 4 cut(s) | 47, 112, 283, 353 |
| MluNI | TGGCCA | 1 cut(s) | 170 |
| MnlI | CCTC | 3 cut(s) | 73, 305, 346 |
| Mox20I | TGGCCA | 1 cut(s) | 170 |
| MscI | TGGCCA | 1 cut(s) | 170 |
| MseI | TTAA | 2 cut(s) | 104, 361 |
| Msp20I | TGGCCA | 1 cut(s) | 170 |
| NdeII | GATC | 3 cut(s) | 29, 54, 206 |
| NlaIII | CATG | 3 cut(s) | 218, 248, 263 |
| NspI | RCATGY | 1 cut(s) | 248 |
| PaeR7I | CTCGAG | 1 cut(s) | 33 |
| PagI | TCATGA | 2 cut(s) | 214, 259 |
| PkrI | GCNGC | 1 cut(s) | 63 |
| PsuI | RGATCY | 1 cut(s) | 29 |
| SaqAI | TTAA | 2 cut(s) | 104, 361 |
| SatI | GCNGC | 1 cut(s) | 62 |
| Sau3AI | GATC | 3 cut(s) | 29, 54, 206 |
| SetI | ASST | 7 cut(s) | 87, 96, 139, 199, 294, 322, 350 |
| Sfr274I | CTCGAG | 1 cut(s) | 33 |
| SlaI | CTCGAG | 1 cut(s) | 33 |
| SmlI | CTYRAG | 2 cut(s) | 33, 128 |
| SmoI | CTYRAG | 2 cut(s) | 33, 128 |
| Sse9I | AATT | 4 cut(s) | 47, 112, 283, 353 |
| SsiI | CCGC | 1 cut(s) | 62 |
| SspI | AATATT | 1 cut(s) | 14 |
| TaaI | ACNGT | 1 cut(s) | 120 |
| TaqI | TCGA | 1 cut(s) | 34 |
| TasI | AATT | 4 cut(s) | 47, 112, 283, 353 |
| TauI | GCSGC | 1 cut(s) | 64 |
| Tru1I | TTAA | 2 cut(s) | 104, 361 |
| Tru9I | TTAA | 2 cut(s) | 104, 361 |
| TscAI | CASTG | 2 cut(s) | 123, 194 |
| TspDTI | ATGAA | 1 cut(s) | 231 |
| TspGWI | ACGGA | 1 cut(s) | 159 |
| TspRI | CASTG | 2 cut(s) | 123, 194 |
| XapI | RAATTY | 2 cut(s) | 47, 353 |
| XceI | RCATGY | 1 cut(s) | 248 |
| XhoI | CTCGAG | 1 cut(s) | 33 |