Transglutaminase-like superfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19160 AT4G19160 AT4G19160 AT4G19160 |
| fragaria_vesca | FvH4_2g37180 FvH4_2g37220 |
| prunus_persica | Prupe.1G352900_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0402301 RchiOBHm_Chr6g0304491 |
| rosa_laevigata | RLG00000006643 RLG00000010972 RLG00000033770 RLG00000034679 |
| rosa_multiflora | Rmu_ssc0000218.1_g000055 |
| rosa_roxburghii | Rroxscaffold_7G00163700 |
| rosa_rugosa | Rorug06G0332200 Rorug06G0332300 Rorug06G0332400 |
| rosa_samantha | Rh4BG074000 Rh5CG116700 Rh6AG445000 Rh6BG457400 Rh6CG457700 Rh6DG444500 |
| rosa_wichuraiana | Rw6G038630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 150 |
| AgsI | TTSAA | 3 cut(s) | 7, 186, 270 |
| AluBI | AGCT | 1 cut(s) | 119 |
| AluI | AGCT | 1 cut(s) | 119 |
| Alw26I | GTCTC | 1 cut(s) | 123 |
| AoxI | GGCC | 1 cut(s) | 150 |
| BalI | TGGCCA | 1 cut(s) | 152 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| BcoDI | GTCTC | 1 cut(s) | 123 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BmiI | GGNNCC | 1 cut(s) | 276 |
| BmsI | GCATC | 2 cut(s) | 86, 195 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| BpuEI | CTTGAG | 1 cut(s) | 131 |
| Bse1I | ACTGG | 1 cut(s) | 176 |
| BseMII | CTCAG | 1 cut(s) | 235 |
| BseNI | ACTGG | 1 cut(s) | 176 |
| BseRI | GAGGAG | 1 cut(s) | 267 |
| BshFI | GGCC | 1 cut(s) | 152 |
| BsmAI | GTCTC | 1 cut(s) | 123 |
| BsnI | GGCC | 1 cut(s) | 152 |
| Bsp143I | GATC | 2 cut(s) | 68, 188 |
| BspANI | GGCC | 1 cut(s) | 152 |
| BspCNI | CTCAG | 1 cut(s) | 234 |
| BspHI | TCATGA | 1 cut(s) | 241 |
| BspLI | GGNNCC | 1 cut(s) | 276 |
| BsrI | ACTGG | 1 cut(s) | 176 |
| BssMI | GATC | 2 cut(s) | 68, 188 |
| Bst4CI | ACNGT | 2 cut(s) | 26, 102 |
| BstDEI | CTNAG | 2 cut(s) | 221, 299 |
| BstKTI | GATC | 2 cut(s) | 71, 191 |
| BstMAI | GTCTC | 1 cut(s) | 123 |
| BstMBI | GATC | 2 cut(s) | 68, 188 |
| BstNSI | RCATGY | 1 cut(s) | 230 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BsuRI | GGCC | 1 cut(s) | 152 |
| BtsIMutI | CAGTG | 2 cut(s) | 98, 169 |
| CciI | TCATGA | 1 cut(s) | 241 |
| CviAII | CATG | 3 cut(s) | 197, 227, 242 |
| CviJI | RGCY | 5 cut(s) | 109, 119, 152, 166, 275 |
| CviKI_1 | RGCY | 5 cut(s) | 109, 119, 152, 166, 275 |
| DdeI | CTNAG | 2 cut(s) | 221, 299 |
| DpnI | GATC | 2 cut(s) | 70, 190 |
| DpnII | GATC | 2 cut(s) | 68, 188 |
| EaeI | YGGCCR | 1 cut(s) | 150 |
| FaeI | CATG | 3 cut(s) | 200, 230, 245 |
| FaiI | YATR | 3 cut(s) | 198, 228, 243 |
| FatI | CATG | 3 cut(s) | 196, 226, 241 |
| FspBI | CTAG | 1 cut(s) | 66 |
| HaeIII | GGCC | 1 cut(s) | 152 |
| Hin1II | CATG | 3 cut(s) | 200, 230, 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 232 |
| Hpy188I | TCNGA | 1 cut(s) | 82 |
| Hpy188III | TCNNGA | 3 cut(s) | 18, 186, 242 |
| Hpy8I | GTNNAC | 1 cut(s) | 232 |
| HpyAV | CCTTC | 1 cut(s) | 42 |
| HpyCH4III | ACNGT | 2 cut(s) | 26, 102 |
| HpyF3I | CTNAG | 2 cut(s) | 221, 299 |
| Hsp92II | CATG | 3 cut(s) | 200, 230, 245 |
| Kzo9I | GATC | 2 cut(s) | 68, 188 |
| LmnI | GCTCC | 1 cut(s) | 280 |
| LpnPI | CCDG | 4 cut(s) | 3, 90, 157, 208 |
| LweI | GCATC | 2 cut(s) | 86, 195 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MaeIII | GTNAC | 2 cut(s) | 10, 282 |
| MalI | GATC | 2 cut(s) | 70, 190 |
| MboI | GATC | 2 cut(s) | 68, 188 |
| MboII | GAAGA | 1 cut(s) | 71 |
| MlsI | TGGCCA | 1 cut(s) | 152 |
| MluCI | AATT | 2 cut(s) | 36, 94 |
| MluNI | TGGCCA | 1 cut(s) | 152 |
| MnlI | CCTC | 1 cut(s) | 288 |
| Mox20I | TGGCCA | 1 cut(s) | 152 |
| MscI | TGGCCA | 1 cut(s) | 152 |
| MseI | TTAA | 1 cut(s) | 86 |
| Msp20I | TGGCCA | 1 cut(s) | 152 |
| NdeII | GATC | 2 cut(s) | 68, 188 |
| NlaIII | CATG | 3 cut(s) | 200, 230, 245 |
| NlaIV | GGNNCC | 1 cut(s) | 276 |
| NspI | RCATGY | 1 cut(s) | 230 |
| PagI | TCATGA | 1 cut(s) | 241 |
| PflFI | GACNNNGTC | 1 cut(s) | 24 |
| PspN4I | GGNNCC | 1 cut(s) | 276 |
| PsyI | GACNNNGTC | 1 cut(s) | 24 |
| SaqAI | TTAA | 1 cut(s) | 86 |
| Sau3AI | GATC | 2 cut(s) | 68, 188 |
| SetI | ASST | 4 cut(s) | 12, 53, 121, 305 |
| SfaNI | GCATC | 2 cut(s) | 86, 195 |
| SmlI | CTYRAG | 1 cut(s) | 110 |
| SmoI | CTYRAG | 1 cut(s) | 110 |
| Sse9I | AATT | 2 cut(s) | 36, 94 |
| SspMI | CTAG | 1 cut(s) | 66 |
| TaaI | ACNGT | 2 cut(s) | 26, 102 |
| TaqI | TCGA | 1 cut(s) | 57 |
| TasI | AATT | 2 cut(s) | 36, 94 |
| Tru1I | TTAA | 1 cut(s) | 86 |
| Tru9I | TTAA | 1 cut(s) | 86 |
| TscAI | CASTG | 2 cut(s) | 105, 176 |
| TspRI | CASTG | 2 cut(s) | 105, 176 |
| Tth111I | GACNNNGTC | 1 cut(s) | 24 |
| XceI | RCATGY | 1 cut(s) | 230 |
| XspI | CTAG | 1 cut(s) | 66 |