Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006139

Physical Location & Seq

Genomic Coordinates Forward (+)

2273531 .. 2279533

Gene Structure 6003 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGGGAGCGTCGATCGAGTCGACGATCGGACCTTTAGGGTTAATTTGACCGGCGATTCAGTTATTAAGCTGAGGGACAGCGTCGGCGAGAAGCTTAAGGAGTTTATGGGGATTACACCGATGACACTCTTGTGTATTGAGTATGTAATTGTCCTTTTAAAGAATGGCAGGCGTAAAGAAGAAGCGAAGAATGAGTTGAATGTCTTTTTAGGGGATGACAGTGATTCTTTTGTTTCTTGGTTGTGGGATCATCTGGCTTCAAATACCGATTTGCATGTACAACCTCAGGATTCTTATATGGAAGATGCAAGTAAAAGGAAATCCTTATCAGGGGACGAAACAGGAAAAAATGATTCTCATCATTTGGGTTCTGCGCCAGACAAAGTTAAGTCTAACAAATCATCTAGAAGCCGGCACAACAGAGAATGGAGAGGACTAGCGAGGGATGCAGCTGAACCCCCTCCTTTTCTAAGCTCTGAGCTTGGAAGTGTTCATGTAGAGGAAAAAAGTCACAGCAAGGTCAGTCGTGCCAAATCTCCTTCCCTGCAACCTGCAGCTCAGAGGAAAAGGATTCGGCCTGATGAGCGGCAGCATTCAAAGAGGGAAGTAGTTTCTCAAGGGAATATTGATGCCCCGCGTCGGCTACTCCAATTTGCTGTCCGTGATGCGCTGACAACTTCAAGGCATTCCAATTCAGCAACAGAGCCCACCTTGAAGCGTCTCCGTTCTGTCGTTTCTACGTCCACTGGTGACTCATCATTGGTTGATCCTCCTCGGCGACTTCAGTCTGTTGCGAGAGTGCCAAATTCCATGGCAACAGTAATGAAAGCTGTTGCAGAGGCTGCTGAAGATGTAACAAGAGTTAAATCTTCAGGAAGCGTGTTTGATCGACTTGGTCGTGGCATGGATGTCTCAGAGACGAGTGGGCCACTCGCATTGTTTAGAGAAGCTGCTACTGAGGATGTTGACTATGAAGAAATTCATGAACACACCCGATCGACATATCTGCAAAGAAGTCAATACAGTGGGCAGTATGTTGGGAACAGTATGTTAGATAGTGAAACTGGCTTGCCTTCTGATTCTGTTTCAGACAATGAAGGGTTTGATGATGTCAATGTTAAGGGGCGTAGAGTCGCTGATGTTTCTCAAACTGGGACATCTGGTGGTAACAACGGTGACAATTCACTGATGGTGCAGTACAGTGTAGCTAAGAATGGTGATGATCTAAGGCGGATATCAACAAACAAAGATCAGGGTCAACCTACTGCACCTGCAAATAATTCTCACAAGATTGTGAACATATCCGTGAATGTCAATACTTGGAAACCACCCCATTTTCAGGAGCCAAGGGAGGTAGCTGAGCTGGACGATTGGAAATCTGTACAGGATATTGAAGCAAGCGCTCCAAATTCTGATTTGCTTTTAATGAAGGAGAACAGCAACCCTGTGCCAGTTAGTAATGGAAATGCAAATCCTGCCGCAGATTCTCAAAAGGTGCTTTCATCTTCTACTGATCGTGCAGGTCTATATGCTGCCGGTCGTCCTTTGGAGGATGCAGATTCACGAACTATCTTTGTTAGCAATGTCCATTTTGCTGCTACGAAAGATAGTCTTTCTAGACATTTTAACAAGTTTGGTGAAGTGCTAAAGGTGGTGATACTTACTGATGCAGCAACTGGACAACCTAGAGGGTCGGCTTATGTAGAGTTCATGCGAAAGGAGGCAGCAGACAATGCATTATCTCTGGATGGCACCTCCTTTATGTCACGGATCCTTAAGGTCGTTAAGAGGAGTGCAGCCCACCAAGAAGCCGCAGCTCCTGCCATGATATGGCCACGCGTAACCCGTAGTTCTTCATTTACCACTGCCAGGTTTTCTAGGGCACCATTCCCAAGAGGCATGACAGGTGGATATAGGCCTCGTGCCTTAATCAAACCAGGTGCCAGGAGCATGCAGTGGAAGCGGGATTCTCAAACCACTCCTGGTGAAAGTGGCACTCCAGTGTCTGGCATGGCTGCTCCCTCACCAACAGGTCGTAGTCTCACCTATGTTCGAACAGAAGCTAAGCCAGCGGGCAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0002237 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010033 GO:0016234 GO:0016310 GO:0019538 GO:0019899 GO:0023014 GO:0023052 GO:0032496 GO:0032991 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0042405 GO:0043085 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051338 GO:0051347 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0065009 GO:0070063 GO:0070887 GO:0071216 GO:0071219 GO:0071222 GO:0071310 GO:0071396 GO:0071704 GO:1901564 GO:1901700 GO:1901701 GO:1904245 GO:1904247 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PWI RRM_1

Protein Analysis

693

Amino Acids

75.83

Weight (kDa)

9.1

Isoelectric Point (pI)

49.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	524 - 592	1.7e-16	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006139)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12640 AT3G12640 AT3G12640 AT3G12640
fragaria_vesca	FvH4_7g00830 FvH4_7g00830 FvH4_7g00830
malus_domestica	MD02G1314400.v1.1 MD07G1007800.v1.1
prunus_persica	Prupe.2G010500_v2.0.a1
pyrus_communis	pycom02g26360 pycom07g00640
rosa_chinensis	RchiOBHm_Chr1g0314991
rosa_laevigata	RLG00000030749
rosa_multiflora	Rmu_co8101366.1_g000001 Rmu_co8205378.1_g000001 Rmu_sc0004180.1_g000037 Rmu_sc0017414.1_g000001 Rmu_sc0023178.1_g000001 Rmu_sc0036535.1_g000001
rosa_roxburghii	Rroxscaffold_4G00331600
rosa_rugosa	Rorug01G0004200
rosa_samantha	Rh1AG014700 Rh1BG007100 Rh1CG013000 Rh1DG008500
rosa_wichuraiana	Rw1G000730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1279
Acc36I	ACCTGC	3 cut(s)	559, 1279, 1511
AccB1I	GGYRCC	3 cut(s)	1751, 1882, 1940
AccB7I	CCANNNNNTGG	2 cut(s)	1830, 2006
AccBSI	CCGCTC	1 cut(s)	586
AccI	GTMKAC	1 cut(s)	21
AccII	CGCG	2 cut(s)	637, 1839
AciI	CCGC	7 cut(s)	586, 635, 1231, 1479, 1812, 1963, 2072
AclWI	GGATC	4 cut(s)	255, 761, 1765, 1778
AcoI	YGGCCR	1 cut(s)	1832
AcsI	RAATTY	3 cut(s)	805, 978, 1408
AcuI	CTGAAG	3 cut(s)	767, 855, 867
AfaI	GTAC	3 cut(s)	279, 1199, 1383
AfeI	AGCGCT	1 cut(s)	1402
AfiI	CCNNNNNNNGG	6 cut(s)	330, 639, 1339, 1830, 1869, 2006
AflII	CTTAAG	2 cut(s)	95, 1775
AflIII	ACRYGT	1 cut(s)	1837
AgsI	TTSAA	6 cut(s)	199, 261, 597, 681, 715, 1394
AjnI	CCWGG	4 cut(s)	1868, 1936, 1943, 1981
AleI	CACNNNNGTG	2 cut(s)	130, 2000
Alw26I	GTCTC	4 cut(s)	725, 911, 916, 2045
AlwI	GGATC	4 cut(s)	255, 761, 1765, 1778
AlwNI	CAGNNNCTG	4 cut(s)	842, 1676, 1820, 2006
Aor51HI	AGCGCT	1 cut(s)	1402
AoxI	GGCC	4 cut(s)	575, 926, 1832, 1916
ApoI	RAATTY	3 cut(s)	805, 978, 1408
Asp700I	GAANNNNTTC	1 cut(s)	978
AspLEI	GCGC	3 cut(s)	376, 670, 1403
AspS9I	GGNCC	2 cut(s)	30, 926
AsuHPI	GGTGA	8 cut(s)	761, 1187, 1229, 1649, 1666, 1997, 2016, 2035
AsuII	TTCGAA	1 cut(s)	2053
AvaII	GGWCC	1 cut(s)	30
AxyI	CCTNAGG	1 cut(s)	285
BaeGI	GKGCMC	1 cut(s)	1885
BalI	TGGCCA	1 cut(s)	1834
BamHI	GGATCC	1 cut(s)	1770
BanI	GGYRCC	3 cut(s)	1751, 1882, 1940
BanII	GRGCYC	1 cut(s)	708
BauI	CACGAG	1 cut(s)	1920
BbvCI	CCTCAGC	1 cut(s)	71
BccI	CCATC	2 cut(s)	1183, 1742
BcgI	CGANNNNNNTGC	2 cut(s)	988, 1022
BciT130I	CCWGG	4 cut(s)	1870, 1938, 1945, 1983
BcoDI	GTCTC	4 cut(s)	725, 911, 916, 2045
BfaI	CTAG	5 cut(s)	405, 437, 1617, 1686, 1878
BfmI	CTRYAG	1 cut(s)	552
BfoI	RGCGCY	1 cut(s)	1404
BfrI	CTTAAG	2 cut(s)	95, 1775
BfuAI	ACCTGC	3 cut(s)	559, 1279, 1511
BlpI	GCTNAGC	2 cut(s)	1359, 2064
Bme1390I	CCNGG	4 cut(s)	1870, 1938, 1945, 1983
Bme18I	GGWCC	1 cut(s)	30
BmgT120I	GGNCC	2 cut(s)	30, 926
BmiI	GGNNCC	5 cut(s)	1344, 1753, 1772, 1884, 1942
BmrFI	CCNGG	4 cut(s)	1870, 1938, 1945, 1983
BmrI	ACTGGG	1 cut(s)	1161
BmsI	GCATC	6 cut(s)	295, 436, 619, 655, 1543, 1657
BmuI	ACTGGG	1 cut(s)	1161
BoxI	GACNNNNGTC	1 cut(s)	784
BpmI	CTGGAG	1 cut(s)	1983
Bpu10I	CCTNAGC	1 cut(s)	71
Bpu1102I	GCTNAGC	2 cut(s)	1359, 2064
Bpu14I	TTCGAA	1 cut(s)	2053
BpuEI	CTTGAG	1 cut(s)	600
BsaBI	GATNNNNATC	1 cut(s)	357
BsaJI	CCNNGG	3 cut(s)	773, 810, 1346
Bsc4I	CCNNNNNNNGG	6 cut(s)	330, 639, 1339, 1830, 1869, 2006
Bse118I	RCCGGY	3 cut(s)	50, 411, 1535
Bse1I	ACTGG	6 cut(s)	751, 1069, 1156, 1451, 1681, 2000
Bse21I	CCTNAGG	1 cut(s)	285
Bse3DI	GCAATG	1 cut(s)	1588
Bse8I	GATNNNNATC	1 cut(s)	357
BseBI	CCWGG	4 cut(s)	1870, 1938, 1945, 1983
BseDI	CCNNGG	3 cut(s)	773, 810, 1346
BseGI	GGATG	6 cut(s)	220, 451, 913, 967, 1558, 1753
BseJI	GATNNNNATC	1 cut(s)	357
BseLI	CCNNNNNNNGG	6 cut(s)	330, 639, 1339, 1830, 1869, 2006
BseMI	GCAATG	1 cut(s)	1588
BseMII	CTCAG	7 cut(s)	62, 299, 468, 572, 927, 948, 1350
BseNI	ACTGG	6 cut(s)	751, 1069, 1156, 1451, 1681, 2000
BseRI	GAGGAG	2 cut(s)	762, 1804
BseSI	GKGCMC	1 cut(s)	1885
BsgI	GTGCAG	4 cut(s)	1214, 1251, 1539, 1815
Bsh1236I	CGCG	2 cut(s)	637, 1839
Bsh1285I	CGRYCG	4 cut(s)	16, 28, 998, 1540
BshFI	GGCC	4 cut(s)	577, 928, 1834, 1918
BshNI	GGYRCC	3 cut(s)	1751, 1882, 1940
BsiEI	CGRYCG	4 cut(s)	16, 28, 998, 1540
BsiSI	CCGG	3 cut(s)	51, 412, 1536
BslFI	GGGAC	3 cut(s)	89, 347, 1168
BslI	CCNNNNNNNGG	6 cut(s)	330, 639, 1339, 1830, 1869, 2006
BsmAI	GTCTC	4 cut(s)	725, 911, 916, 2045
BsmBI	CGTCTC	2 cut(s)	725, 911
BsmFI	GGGAC	3 cut(s)	89, 347, 1168
BsmI	GAATGC	2 cut(s)	592, 685
BsnI	GGCC	4 cut(s)	577, 928, 1834, 1918
Bsp119I	TTCGAA	1 cut(s)	2053
Bsp1286I	GDGCHC	2 cut(s)	708, 1885
Bsp1407I	TGTACA	2 cut(s)	277, 1381
Bsp1720I	GCTNAGC	2 cut(s)	1359, 2064
Bsp19I	CCATGG	1 cut(s)	810
BspACI	CCGC	7 cut(s)	586, 635, 1231, 1479, 1812, 1963, 2072
BspANI	GGCC	4 cut(s)	577, 928, 1834, 1918
BspCNI	CTCAG	7 cut(s)	63, 298, 469, 571, 926, 949, 1351
BspFNI	CGCG	2 cut(s)	637, 1839
BspHI	TCATGA	1 cut(s)	982
BspLI	GGNNCC	5 cut(s)	1344, 1753, 1772, 1884, 1942
BspMAI	CTGCAG	1 cut(s)	556
BspMI	ACCTGC	3 cut(s)	559, 1279, 1511
BspPI	GGATC	4 cut(s)	255, 761, 1765, 1778
BspT104I	TTCGAA	1 cut(s)	2053
BspT107I	GGYRCC	3 cut(s)	1751, 1882, 1940
BspTI	CTTAAG	2 cut(s)	95, 1775
BsrBI	CCGCTC	1 cut(s)	586
BsrDI	GCAATG	1 cut(s)	1588
BsrFI	RCCGGY	3 cut(s)	50, 411, 1535
BsrGI	TGTACA	2 cut(s)	277, 1381
BsrI	ACTGG	6 cut(s)	751, 1069, 1156, 1451, 1681, 2000
BssAI	RCCGGY	3 cut(s)	50, 411, 1535
BssECI	CCNNGG	3 cut(s)	773, 810, 1346
BssSI	CACGAG	1 cut(s)	1920
BssT1I	CCWWGG	2 cut(s)	810, 1346
Bst2BI	CACGAG	1 cut(s)	1920
Bst2UI	CCWGG	4 cut(s)	1870, 1938, 1945, 1983
Bst4CI	ACNGT	6 cut(s)	221, 820, 1025, 1046, 1175, 1202
BstAFI	CTTAAG	2 cut(s)	95, 1775
BstAPI	GCANNNNNTGC	4 cut(s)	842, 1475, 1733, 1820
BstAUI	TGTACA	2 cut(s)	277, 1381
BstBI	TTCGAA	1 cut(s)	2053
BstC8I	GCNNGC	7 cut(s)	170, 413, 1070, 1399, 1952, 2070, 2074
BstDSI	CCRYGG	1 cut(s)	810
BstF5I	GGATG	6 cut(s)	220, 451, 913, 967, 1558, 1753
BstFNI	CGCG	2 cut(s)	637, 1839
BstH2I	RGCGCY	1 cut(s)	1404
BstHHI	GCGC	3 cut(s)	376, 670, 1403
BstMAI	GTCTC	4 cut(s)	725, 911, 916, 2045
BstMCI	CGRYCG	4 cut(s)	16, 28, 998, 1540
BstMWI	GCNNNNNNNGC	8 cut(s)	446, 583, 842, 1475, 1733, 1820, 1960, 2069
BstNI	CCWGG	4 cut(s)	1870, 1938, 1945, 1983
BstNSI	RCATGY	2 cut(s)	278, 1954
BstPAI	GACNNNNGTC	1 cut(s)	784
BstSCI	CCNGG	4 cut(s)	1868, 1936, 1943, 1981
BstSFI	CTRYAG	1 cut(s)	552
BstSLI	GKGCMC	1 cut(s)	1885
BstUI	CGCG	2 cut(s)	637, 1839
BstX2I	RGATCY	1 cut(s)	1770
BstYI	RGATCY	1 cut(s)	1770
Bsu36I	CCTNAGG	1 cut(s)	285
BsuRI	GGCC	4 cut(s)	577, 928, 1834, 1918
BtgI	CCRYGG	1 cut(s)	810
BtsCI	GGATG	6 cut(s)	220, 451, 913, 967, 1558, 1753
BtsI	GCAGTG	2 cut(s)	1863, 1961
BtsIMutI	CAGTG	8 cut(s)	226, 744, 1030, 1184, 1207, 1863, 1961, 2007
BveI	ACCTGC	3 cut(s)	559, 1279, 1511
Cac8I	GCNNGC	7 cut(s)	170, 413, 1070, 1399, 1952, 2070, 2074
CaiI	CAGNNNCTG	4 cut(s)	842, 1676, 1820, 2006
CciI	TCATGA	1 cut(s)	982
CfoI	GCGC	3 cut(s)	376, 670, 1403
Cfr10I	RCCGGY	3 cut(s)	50, 411, 1535
Cfr13I	GGNCC	2 cut(s)	30, 926
CseI	GACGC	3 cut(s)	70, 626, 707
CsiI	ACCWGGT	1 cut(s)	1936
Csp6I	GTAC	3 cut(s)	278, 1198, 1382
CspCI	CAANNNNNGTGG	2 cut(s)	918, 953
CviQI	GTAC	3 cut(s)	278, 1198, 1382
DraI	TTTAAA	1 cut(s)	159
EaeI	YGGCCR	1 cut(s)	1832
EciI	GGCGGA	1 cut(s)	1246
Eco130I	CCWWGG	2 cut(s)	810, 1346
Eco147I	AGGCCT	1 cut(s)	1918
Eco24I	GRGCYC	1 cut(s)	708
Eco32I	GATATC	1 cut(s)	1236
Eco47I	GGWCC	1 cut(s)	30
Eco47III	AGCGCT	1 cut(s)	1402
Eco57I	CTGAAG	3 cut(s)	767, 855, 867
Eco81I	CCTNAGG	1 cut(s)	285
EcoRII	CCWGG	4 cut(s)	1868, 1936, 1943, 1981
EcoRV	GATATC	1 cut(s)	1236
EcoT14I	CCWWGG	2 cut(s)	810, 1346
EcoT22I	ATGCAT	1 cut(s)	1738
EcoT38I	GRGCYC	1 cut(s)	708
ErhI	CCWWGG	2 cut(s)	810, 1346
Esp3I	CGTCTC	2 cut(s)	725, 911
FalI	AAGNNNNNCTT	2 cut(s)	1596, 1628
FaqI	GGGAC	3 cut(s)	89, 347, 1168
FauI	CCCGC	3 cut(s)	642, 1956, 2065
FblI	GTMKAC	1 cut(s)	21
FokI	GGATG	6 cut(s)	227, 458, 920, 974, 1565, 1760
FriOI	GRGCYC	1 cut(s)	708
FspBI	CTAG	5 cut(s)	405, 437, 1617, 1686, 1878
GlaI	GCGC	3 cut(s)	375, 669, 1402
GsuI	CTGGAG	1 cut(s)	1983
HaeII	RGCGCY	1 cut(s)	1404
HaeIII	GGCC	4 cut(s)	577, 928, 1834, 1918
HapII	CCGG	3 cut(s)	51, 412, 1536
HgaI	GACGC	3 cut(s)	70, 626, 707
HhaI	GCGC	3 cut(s)	376, 670, 1403
Hin6I	GCGC	3 cut(s)	374, 668, 1401
HinP1I	GCGC	3 cut(s)	374, 668, 1401
HincII	GTYRAC	3 cut(s)	22, 967, 1259
HindII	GTYRAC	3 cut(s)	22, 967, 1259
HindIII	AAGCTT	1 cut(s)	92
HpaII	CCGG	3 cut(s)	51, 412, 1536
HphI	GGTGA	8 cut(s)	761, 1187, 1229, 1649, 1666, 1997, 2016, 2035
Hpy166II	GTNNAC	5 cut(s)	22, 744, 967, 1259, 1297
Hpy188I	TCNGA	7 cut(s)	30, 478, 561, 916, 1078, 1090, 1414
Hpy188III	TCNNGA	8 cut(s)	287, 405, 873, 983, 1340, 1563, 1617, 1745
Hpy8I	GTNNAC	5 cut(s)	22, 744, 967, 1259, 1297
Hpy99I	CGWCG	4 cut(s)	14, 26, 86, 642
HpyAV	CCTTC	4 cut(s)	549, 1083, 1091, 1423
HpyCH4III	ACNGT	6 cut(s)	221, 820, 1025, 1046, 1175, 1202
HpyCH4IV	ACGT	1 cut(s)	740
HpyF10VI	GCNNNNNNNGC	8 cut(s)	446, 583, 842, 1475, 1733, 1820, 1960, 2069
HpySE526I	ACGT	1 cut(s)	740
HspAI	GCGC	3 cut(s)	374, 668, 1401
KroI	GCCGGC	1 cut(s)	411
KroNI	GCCGGC	1 cut(s)	413
LmnI	GCTCC	6 cut(s)	6, 1342, 1408, 1822, 1947, 2023
LweI	GCATC	6 cut(s)	295, 436, 619, 655, 1543, 1657
MabI	ACCWGGT	1 cut(s)	1936
MaeI	CTAG	5 cut(s)	405, 437, 1617, 1686, 1878
MaeII	ACGT	1 cut(s)	740
MaeIII	GTNAC	7 cut(s)	509, 749, 853, 1166, 1175, 1764, 1840
MbiI	CCGCTC	1 cut(s)	586
MboII	GAAGA	8 cut(s)	191, 199, 314, 860, 861, 986, 1497, 1845
MflI	RGATCY	1 cut(s)	1770
MhlI	GDGCHC	2 cut(s)	708, 1885
MlsI	TGGCCA	1 cut(s)	1834
MluI	ACGCGT	1 cut(s)	1837
MluNI	TGGCCA	1 cut(s)	1834
MlyI	GAGTC	3 cut(s)	27, 746, 1140
Mox20I	TGGCCA	1 cut(s)	1834
Mph1103I	ATGCAT	1 cut(s)	1738
MroNI	GCCGGC	1 cut(s)	411
MroXI	GAANNNNTTC	1 cut(s)	978
MscI	TGGCCA	1 cut(s)	1834
MslI	CAYNNNNRTG	3 cut(s)	130, 1304, 2000
Msp20I	TGGCCA	1 cut(s)	1834
MspA1I	CMGCKG	2 cut(s)	452, 2072
MspCI	CTTAAG	2 cut(s)	95, 1775
MspI	CCGG	3 cut(s)	51, 412, 1536
MspR9I	CCNGG	4 cut(s)	1870, 1938, 1945, 1983
Mva1269I	GAATGC	2 cut(s)	592, 685
MvaI	CCWGG	4 cut(s)	1870, 1938, 1945, 1983
MvnI	CGCG	2 cut(s)	637, 1839
MwoI	GCNNNNNNNGC	8 cut(s)	446, 583, 842, 1475, 1733, 1820, 1960, 2069
NaeI	GCCGGC	1 cut(s)	413
NcoI	CCATGG	1 cut(s)	810
NgoMIV	GCCGGC	1 cut(s)	411
NlaIV	GGNNCC	5 cut(s)	1344, 1753, 1772, 1884, 1942
NmeAIII	GCCGAG	1 cut(s)	754
NmuCI	GTSAC	4 cut(s)	509, 749, 1175, 1764
NsiI	ATGCAT	1 cut(s)	1738
NspI	RCATGY	2 cut(s)	278, 1954
NspV	TTCGAA	1 cut(s)	2053
OliI	CACNNNNGTG	2 cut(s)	130, 2000
PaeI	GCATGC	1 cut(s)	1954
PagI	TCATGA	1 cut(s)	982
PaqCI	CACCTGC	1 cut(s)	1279
PceI	AGGCCT	1 cut(s)	1918
PcsI	WCGNNNNNNNCGW	3 cut(s)	18, 895, 1843
PctI	GAATGC	2 cut(s)	592, 685
PdiI	GCCGGC	1 cut(s)	413
PdmI	GAANNNNTTC	1 cut(s)	978
PfeI	GAWTC	9 cut(s)	56, 224, 290, 353, 571, 1079, 1484, 1559, 1967
PflFI	GACNNNGTC	2 cut(s)	80, 894
PflMI	CCANNNNNTGG	2 cut(s)	1830, 2006
Ple19I	CGATCG	3 cut(s)	16, 28, 998
PleI	GAGTC	3 cut(s)	26, 746, 1139
PpsI	GAGTC	3 cut(s)	26, 746, 1139
PshAI	GACNNNNGTC	1 cut(s)	784
Psp6I	CCWGG	4 cut(s)	1868, 1936, 1943, 1981
PspGI	CCWGG	4 cut(s)	1868, 1936, 1943, 1981
PspN4I	GGNNCC	5 cut(s)	1344, 1753, 1772, 1884, 1942
PspPI	GGNCC	2 cut(s)	30, 926
PstI	CTGCAG	1 cut(s)	556
PstNI	CAGNNNCTG	4 cut(s)	842, 1676, 1820, 2006
PsuI	RGATCY	1 cut(s)	1770
PsyI	GACNNNGTC	2 cut(s)	80, 894
PvuI	CGATCG	3 cut(s)	16, 28, 998
PvuII	CAGCTG	1 cut(s)	452
RsaI	GTAC	3 cut(s)	279, 1199, 1383
RsaNI	GTAC	3 cut(s)	278, 1198, 1382
RseI	CAYNNNNRTG	3 cut(s)	130, 1304, 2000
SalI	GTCGAC	1 cut(s)	20
Sau96I	GGNCC	2 cut(s)	30, 926
SchI	GAGTC	3 cut(s)	27, 746, 1140
ScrFI	CCNGG	4 cut(s)	1870, 1938, 1945, 1983
SduI	GDGCHC	2 cut(s)	708, 1885
SexAI	ACCWGGT	1 cut(s)	1936
SfaNI	GCATC	6 cut(s)	295, 436, 619, 655, 1543, 1657
SfcI	CTRYAG	1 cut(s)	552
SfuI	TTCGAA	1 cut(s)	2053
SinI	GGWCC	1 cut(s)	30
SmiMI	CAYNNNNRTG	3 cut(s)	130, 1304, 2000
SmlI	CTYRAG	3 cut(s)	95, 615, 1775
SmoI	CTYRAG	3 cut(s)	95, 615, 1775
SphI	GCATGC	1 cut(s)	1954
SseBI	AGGCCT	1 cut(s)	1918
SsiI	CCGC	7 cut(s)	586, 635, 1231, 1479, 1812, 1963, 2072
SspI	AATATT	1 cut(s)	625
SspMI	CTAG	5 cut(s)	405, 437, 1617, 1686, 1878
StuI	AGGCCT	1 cut(s)	1918
StyD4I	CCNGG	4 cut(s)	1868, 1936, 1943, 1981
StyI	CCWWGG	2 cut(s)	810, 1346
TaaI	ACNGT	6 cut(s)	221, 820, 1025, 1046, 1175, 1202
TaiI	ACGT	1 cut(s)	743
TaqI	TCGA	6 cut(s)	12, 16, 21, 889, 998, 2053
TatI	WGTACW	3 cut(s)	277, 1197, 1381
TauI	GCSGC	3 cut(s)	589, 1481, 1814
TfiI	GAWTC	9 cut(s)	56, 224, 290, 353, 571, 1079, 1484, 1559, 1967
TscAI	CASTG	8 cut(s)	226, 751, 1030, 1191, 1207, 1870, 1961, 2007
TseFI	GTSAC	4 cut(s)	509, 749, 1175, 1764
Tsp45I	GTSAC	4 cut(s)	509, 749, 1175, 1764
TspGWI	ACGGA	4 cut(s)	650, 713, 1294, 1783
TspRI	CASTG	8 cut(s)	226, 751, 1030, 1191, 1207, 1870, 1961, 2007
Tth111I	GACNNNGTC	2 cut(s)	80, 894
Van91I	CCANNNNNTGG	2 cut(s)	1830, 2006
Vha464I	CTTAAG	2 cut(s)	95, 1775
VpaK11BI	GGWCC	1 cut(s)	30
XapI	RAATTY	3 cut(s)	805, 978, 1408
XbaI	TCTAGA	2 cut(s)	404, 1616
XceI	RCATGY	2 cut(s)	278, 1954
XmiI	GTMKAC	1 cut(s)	21
XmnI	GAANNNNTTC	1 cut(s)	978
XspI	CTAG	5 cut(s)	405, 437, 1617, 1686, 1878
Zsp2I	ATGCAT	1 cut(s)	1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.