Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007142

Physical Location & Seq

Genomic Coordinates Reverse (-)

66235189 .. 66237467

Gene Structure 2279 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGGCTCTCTCCAAACCCTCCTTCCTCACCCACCTCAAAACCCTAGCCAAACCGCCCCACCGCCACCTCCGCCGCCCCTCATTCCTCTCTCTGCGTTCCCTCTCCTTCGCCACCCCCGAAGACGCCGCCGCCGACCGCCGCCGCCGCAAGCGCCGCCTCCGCATCGAGCCCCCAATCTCCCCCCTCCACCGCTCCCAACAACAACAACAACCCCCAAAACCCCAAAACCCTAACCCTAACCCTAACTCCCCCAAGCTCCCGGAACCCGTCTCCGCTCTCTCCGGCAACCGCCTCAACCTCCACAACAAAATCCTCGCCCTCATCCGCCGCAACGACCTCGAAGAAGCCGCCCTCTACACCCGCCACTCCATCTACTCCAACTGCCGCCCCACCATCTACACCGTCAACTCCGTACTCGCCGCCCAGCTCCGCCAGTCCAAGTACTCCGACCTCCTCTCCCTCCACCGCTTCATCACCCAGGCCGGCGTCGCCCCCAACATCGTCACCCACAACCTCATCTTCCAGACCTATCTCGACTGCCGGAAGCCCGATACTGCTATGGAGCATTACAAGCAGCTCATCAACGACGCGCCGTTTAATCCTTCTCCGACGACCTACCGGATTCTGATCAAGGGGTTGGTGGACAATGGCAAGCTGGAGAGGGCCATGGAGCTCAAGGAGGAGATGGTTGATGTCAAGGGTTTCGAGCCGGACCCGGTTGTGTATCACTATCTGATGGTGGGGTGTGTGAGGAATTCGGATTCGGATGGGGTGTTTCGGCTTTACGAGGAGTTGAAGGAGAAGCTGGGAGGGGAGGTGGAGGATGGGGTTGTGATTGGGAGTCTGATGAAGGGGTATTTCATCAAGGAAATGGAGAAGGAGGCAATGGAGTGTTATGAACAGGCTTCGAAGGTGAAGATGAATGCGGTGGCGTATAACTCGGTGTTGGAGGCTTTGTGTGGGTATGGGAAGTTTGATGAGGCGTTGAAGTTGTTTGATAGGATGAGGGAGGAGCATTTCCCGCCGAGGAGGTTTACGGTGAATTTGGGGAGCTTTAATGTGATGGCGGACGGGTATTGTGCGCAGGGGAGGTTTAAGGAGGCGGTTGAGGTTTTTAGGAAGATGGGGGAGTATAGATGTGACCCGGATACGTTGTCGTTTAATAATTTGATTCAGCATTTGTGTAGCAATGGGATGCTGAGTGAGGCTGAGGAGGTTTATGGGGAGATGGGGGAGAAGGGGGTGAACCCGGATGAGTATACTTACTCGTTGTTGATGGATACTTGTTTTGAGGAGAATAGGCCTGATGATGCGGCTGAGTATTTTAGGAAAATGGTGGATGAGAAGTTGAGGCCGAATTTGGCTGTTTATAGTAGGTTGGCTGATGGGTTGGTTAAGGTGGGGAAGGTTGATGAGGCGAAATCGTTTTTTGATCTTATGGGGAAGAAGCTGAAGATGGATGTTGCGAGCTATCAGTTTATAATGAAGGCATTGAGTGATGCAGGGAAATTTGATGAGGTGCTTAATGTGGTGGATACATTGTTGGAGGACGAATGGATTGAATTGAATGAGGAGTTGCAGGAGTTCATCAAAGGGGAGCTGAGAAAGGATGGGAGAGAGGATGAATTGGGAAAGCTGATAGAGGAGAAGGAAAGGCTGAAGGCTGAGGCTAAGGCGAAGGAGATTGAGGAAGCAGAAGCAGCAAAGAGAAGTAGAAGTGCTGCTGTCTCCTCGTTACTTCCGTCTAGTTTGTTTGGGAAGAAAGAGACAGGGTCTACAGAGGCCACTGAAAAAGTAGGTGAAGCTGCCTCAGCTTCTGTGGAGGCTGCTCCAGCTGCTGACACGAACTCGGCAGAGCAAGCAGTCATAGGTGAAAGTTCAGATGAAGAATCCAAAAGCGAGGGTGCAAACGAGCAGGTAGTGGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000166 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006349 GO:0006725 GO:0006807 GO:0007275 GO:0008144 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009960 GO:0009987 GO:0010154 GO:0010468 GO:0016070 GO:0016787 GO:0016788 GO:0017076 GO:0019222 GO:0022414 GO:0030554 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0035639 GO:0036094 GO:0040029 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0060255 GO:0061458 GO:0065007 GO:0071514 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

642

Amino Acids

72.36

Weight (kDa)

5.54

Isoelectric Point (pI)

44.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	202 - 250	4.7e-07	PPR repeat family
PPR_1	PF12854	305 - 336	3.5e-06	PPR repeat
PPR_2	PF13041	308 - 348	2.9e-08	PPR repeat family
PPR	PF01535	310 - 338	1.2e-06	PPR repeat
PPR_2	PF13041	350 - 388	3.1e-07	PPR repeat family
PPR	PF01535	351 - 380	2.1e-06	PPR repeat
PPR_1	PF12854	380 - 410	1.7e-06	PPR repeat
PPR_2	PF13041	382 - 429	4e-15	PPR repeat family
PPR	PF01535	386 - 415	1.9e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49240
fragaria_vesca	FvH4_2g09580
malus_domestica	MD07G1288700.v1.1
prunus_persica	Prupe.2G310200_v2.0.a1
pyrus_communis	pycom01g22880
rosa_chinensis	RchiOBHm_Chr1g0380631
rosa_laevigata	RLG00000026280
rosa_multiflora	Rmu_sc0004647.1_g000010 Rmu_sc0020141.1_g000001 Rmu_sc0020141.1_g000002 Rmu_sc0021483.1_g000003 Rmu_ssc0000015.1_g000013
rosa_roxburghii	Rroxscaffold_4G00279120
rosa_rugosa	Rorug01G0122900 Rorug01G0423100
rosa_samantha	Rh1AG447400 Rh1BG113000 Rh1BG151000 Rh1BG402900 Rh1CG417300 Rh1DG182800 Rh1DG433200 Rh7CG247500
rosa_wichuraiana	Rw1G038940 Rw7G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1481
Acc16I	TGCGCA	1 cut(s)	1083
Acc36I	ACCTGC	1 cut(s)	1906
AccBSI	CCGCTC	2 cut(s)	192, 275
AccI	GTMKAC	2 cut(s)	1259, 1775
AccII	CGCG	1 cut(s)	590
AcsI	RAATTY	4 cut(s)	754, 1042, 1357, 1508
AcuI	CTGAAG	2 cut(s)	1472, 1679
AcyI	GRCGYC	2 cut(s)	123, 486
AfaI	GTAC	2 cut(s)	414, 443
AgsI	TTSAA	4 cut(s)	796, 988, 1562, 1567
AjnI	CCWGG	1 cut(s)	477
AjuI	GAANNNNNNNTTGG	1 cut(s)	37
Alw21I	GWGCWC	1 cut(s)	675
Alw26I	GTCTC	3 cut(s)	274, 1732, 1760
AlwNI	CAGNNNCTG	2 cut(s)	1817, 1838
AoxI	GGCC	5 cut(s)	480, 663, 1301, 1352, 1782
ApeKI	GCWGC	6 cut(s)	574, 1700, 1721, 1805, 1826, 1835
ApoI	RAATTY	4 cut(s)	754, 1042, 1357, 1508
AspLEI	GCGC	3 cut(s)	153, 592, 1084
AspS9I	GGNCC	2 cut(s)	663, 712
AsuC2I	CCSGG	4 cut(s)	260, 716, 1145, 1250
AsuHPI	GGTGA	8 cut(s)	19, 466, 496, 925, 1051, 1255, 1811, 1883
AsuII	TTCGAA	1 cut(s)	908
AvaII	GGWCC	1 cut(s)	712
BanII	GRGCYC	2 cut(s)	171, 675
BbsI	GAAGAC	1 cut(s)	126
Bbv12I	GWGCWC	1 cut(s)	675
BbvCI	CCTCAGC	3 cut(s)	1209, 1665, 1810
BbvI	GCAGC	6 cut(s)	586, 1708, 1712, 1792, 1813, 1822
BceAI	ACGGC	1 cut(s)	577
BcgI	CGANNNNNNTGC	2 cut(s)	319, 353
BciT130I	CCWGG	1 cut(s)	479
BciVI	GTATCC	3 cut(s)	1141, 1273, 1528
BclI	TGATCA	1 cut(s)	627
BcnI	CCSGG	4 cut(s)	260, 716, 1145, 1250
BcoDI	GTCTC	3 cut(s)	274, 1732, 1760
BfaI	CTAG	2 cut(s)	44, 1746
BfmI	CTRYAG	1 cut(s)	1776
BfoI	RGCGCY	1 cut(s)	154
BfuAI	ACCTGC	1 cut(s)	1906
BfuI	GTATCC	3 cut(s)	1141, 1273, 1528
BmcAI	AGTACT	1 cut(s)	443
Bme1390I	CCNGG	5 cut(s)	260, 479, 716, 1145, 1250
Bme18I	GGWCC	1 cut(s)	712
BmgT120I	GGNCC	2 cut(s)	663, 712
BmiI	GGNNCC	2 cut(s)	264, 714
BmrFI	CCNGG	5 cut(s)	260, 479, 716, 1145, 1250
BmsI	GCATC	4 cut(s)	171, 1185, 1300, 1489
BpiI	GAAGAC	1 cut(s)	126
BpmI	CTGGAG	2 cut(s)	677, 1815
Bpu10I	CCTNAGC	4 cut(s)	1209, 1665, 1671, 1810
Bpu14I	TTCGAA	1 cut(s)	908
BpuEI	CTTGAG	1 cut(s)	659
BpuMI	CCSGG	4 cut(s)	260, 716, 1145, 1250
BsaBI	GATNNNNATC	1 cut(s)	626
BsaHI	GRCGYC	2 cut(s)	123, 486
BsaJI	CCNNGG	3 cut(s)	477, 666, 1025
BsaWI	WCCGGW	1 cut(s)	618
BsaXI	ACNNNNNCTCC	8 cut(s)	230, 260, 440, 470, 801, 831, 941, 971
Bse118I	RCCGGY	1 cut(s)	482
Bse1I	ACTGG	1 cut(s)	433
Bse3DI	GCAATG	2 cut(s)	891, 1195
Bse8I	GATNNNNATC	1 cut(s)	626
BseBI	CCWGG	1 cut(s)	479
BseDI	CCNNGG	3 cut(s)	477, 666, 1025
BseJI	GATNNNNATC	1 cut(s)	626
BseMI	GCAATG	2 cut(s)	891, 1195
BseMII	CTCAG	6 cut(s)	1190, 1200, 1308, 1592, 1656, 1824
BseNI	ACTGG	1 cut(s)	433
BseXI	GCAGC	6 cut(s)	586, 1708, 1712, 1792, 1813, 1822
BseYI	CCCAGC	2 cut(s)	423, 805
Bsh1236I	CGCG	1 cut(s)	590
Bsh1285I	CGRYCG	1 cut(s)	136
BshFI	GGCC	5 cut(s)	482, 665, 1303, 1354, 1784
BsiEI	CGRYCG	1 cut(s)	136
BsiHKAI	GWGCWC	1 cut(s)	675
BsiSI	CCGG	9 cut(s)	260, 282, 483, 541, 619, 710, 716, 1145, 1250
BsmAI	GTCTC	3 cut(s)	274, 1732, 1760
BsmBI	CGTCTC	1 cut(s)	274
BsmI	GAATGC	1 cut(s)	928
BsnI	GGCC	5 cut(s)	482, 665, 1303, 1354, 1784
Bsp119I	TTCGAA	1 cut(s)	908
Bsp1286I	GDGCHC	2 cut(s)	171, 675
Bsp143I	GATC	2 cut(s)	627, 1432
Bsp19I	CCATGG	1 cut(s)	666
BspANI	GGCC	5 cut(s)	482, 665, 1303, 1354, 1784
BspCNI	CTCAG	6 cut(s)	1191, 1201, 1309, 1593, 1657, 1823
BspFNI	CGCG	1 cut(s)	590
BspLI	GGNNCC	2 cut(s)	264, 714
BspMI	ACCTGC	1 cut(s)	1906
BspT104I	TTCGAA	1 cut(s)	908
BsrBI	CCGCTC	2 cut(s)	192, 275
BsrDI	GCAATG	2 cut(s)	891, 1195
BsrFI	RCCGGY	1 cut(s)	482
BsrI	ACTGG	1 cut(s)	433
BssAI	RCCGGY	1 cut(s)	482
BssECI	CCNNGG	3 cut(s)	477, 666, 1025
BssMI	GATC	2 cut(s)	627, 1432
BssNAI	GTATAC	1 cut(s)	1260
BssNI	GRCGYC	2 cut(s)	123, 486
BssT1I	CCWWGG	1 cut(s)	666
Bst1107I	GTATAC	1 cut(s)	1260
Bst2UI	CCWGG	1 cut(s)	479
Bst4CI	ACNGT	2 cut(s)	403, 1039
BstACI	GRCGYC	2 cut(s)	123, 486
BstBI	TTCGAA	1 cut(s)	908
BstC8I	GCNNGC	5 cut(s)	149, 484, 653, 1468, 1860
BstDEI	CTNAG	7 cut(s)	1199, 1209, 1317, 1601, 1665, 1671, 1810
BstDSI	CCRYGG	1 cut(s)	666
BstFNI	CGCG	1 cut(s)	590
BstH2I	RGCGCY	1 cut(s)	154
BstHHI	GCGC	3 cut(s)	153, 592, 1084
BstKTI	GATC	2 cut(s)	630, 1435
BstMAI	GTCTC	3 cut(s)	274, 1732, 1760
BstMBI	GATC	2 cut(s)	627, 1432
BstMCI	CGRYCG	1 cut(s)	136
BstNI	CCWGG	1 cut(s)	479
BstSCI	CCNGG	5 cut(s)	258, 477, 714, 1143, 1248
BstSFI	CTRYAG	1 cut(s)	1776
BstUI	CGCG	1 cut(s)	590
BstV1I	GCAGC	6 cut(s)	586, 1708, 1712, 1792, 1813, 1822
BstV2I	GAAGAC	1 cut(s)	126
BstZ17I	GTATAC	1 cut(s)	1260
BsuI	GTATCC	3 cut(s)	1141, 1273, 1528
BsuRI	GGCC	5 cut(s)	482, 665, 1303, 1354, 1784
BtgI	CCRYGG	1 cut(s)	666
BtsIMutI	CAGTG	1 cut(s)	1785
BveI	ACCTGC	1 cut(s)	1906
Cac8I	GCNNGC	5 cut(s)	149, 484, 653, 1468, 1860
CaiI	CAGNNNCTG	2 cut(s)	1817, 1838
CfoI	GCGC	3 cut(s)	153, 592, 1084
Cfr10I	RCCGGY	1 cut(s)	482
Cfr13I	GGNCC	2 cut(s)	663, 712
CseI	GACGC	3 cut(s)	131, 475, 596
Csp6I	GTAC	2 cut(s)	413, 442
CviAII	CATG	1 cut(s)	667
CviQI	GTAC	2 cut(s)	413, 442
DdeI	CTNAG	7 cut(s)	1199, 1209, 1317, 1601, 1665, 1671, 1810
DpnI	GATC	2 cut(s)	629, 1434
DpnII	GATC	2 cut(s)	627, 1432
EciI	GGCGGA	4 cut(s)	59, 314, 419, 1082
Ecl136II	GAGCTC	1 cut(s)	673
Eco130I	CCWWGG	1 cut(s)	666
Eco147I	AGGCCT	1 cut(s)	1303
Eco24I	GRGCYC	2 cut(s)	171, 675
Eco47I	GGWCC	1 cut(s)	712
Eco53kI	GAGCTC	1 cut(s)	673
Eco57I	CTGAAG	2 cut(s)	1472, 1679
EcoICRI	GAGCTC	1 cut(s)	673
EcoRI	GAATTC	1 cut(s)	754
EcoRII	CCWGG	1 cut(s)	477
EcoT14I	CCWWGG	1 cut(s)	666
EcoT38I	GRGCYC	2 cut(s)	171, 675
ErhI	CCWWGG	1 cut(s)	666
Esp3I	CGTCTC	1 cut(s)	274
FaeI	CATG	1 cut(s)	670
FatI	CATG	1 cut(s)	666
FauI	CCCGC	2 cut(s)	368, 1029
FbaI	TGATCA	1 cut(s)	627
FblI	GTMKAC	2 cut(s)	1259, 1775
FriOI	GRGCYC	2 cut(s)	171, 675
FspBI	CTAG	2 cut(s)	44, 1746
FspI	TGCGCA	1 cut(s)	1083
GlaI	GCGC	3 cut(s)	152, 591, 1083
GsaI	CCCAGC	2 cut(s)	427, 809
GsuI	CTGGAG	2 cut(s)	677, 1815
HaeII	RGCGCY	1 cut(s)	154
HaeIII	GGCC	5 cut(s)	482, 665, 1303, 1354, 1784
HapII	CCGG	9 cut(s)	260, 282, 483, 541, 619, 710, 716, 1145, 1250
HgaI	GACGC	3 cut(s)	131, 475, 596
HhaI	GCGC	3 cut(s)	153, 592, 1084
Hin1I	GRCGYC	2 cut(s)	123, 486
Hin1II	CATG	1 cut(s)	670
Hin6I	GCGC	3 cut(s)	151, 590, 1082
HinP1I	GCGC	3 cut(s)	151, 590, 1082
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HinfI	GANTC	5 cut(s)	622, 761, 841, 1171, 1889
HpaII	CCGG	9 cut(s)	260, 282, 483, 541, 619, 710, 716, 1145, 1250
HphI	GGTGA	8 cut(s)	19, 466, 496, 925, 1051, 1255, 1811, 1883
Hpy166II	GTNNAC	6 cut(s)	406, 643, 1035, 1246, 1260, 1776
Hpy188I	TCNGA	8 cut(s)	448, 609, 627, 735, 760, 766, 846, 1882
Hpy188III	TCNNGA	2 cut(s)	523, 533
Hpy8I	GTNNAC	6 cut(s)	406, 643, 1035, 1246, 1260, 1776
Hpy99I	CGWCG	3 cut(s)	491, 590, 613
HpyCH4III	ACNGT	2 cut(s)	403, 1039
HpyCH4IV	ACGT	1 cut(s)	1151
HpyCH4V	TGCA	3 cut(s)	1502, 1579, 1907
HpyF3I	CTNAG	7 cut(s)	1199, 1209, 1317, 1601, 1665, 1671, 1810
HpySE526I	ACGT	1 cut(s)	1151
Hsp92I	GRCGYC	2 cut(s)	123, 486
Hsp92II	CATG	1 cut(s)	670
HspAI	GCGC	3 cut(s)	151, 590, 1082
KroI	GCCGGC	1 cut(s)	482
KroNI	GCCGGC	1 cut(s)	484
Ksp22I	TGATCA	1 cut(s)	627
Kzo9I	GATC	2 cut(s)	627, 1432
LmnI	GCTCC	9 cut(s)	197, 261, 432, 562, 670, 1012, 1050, 1597, 1834
Lsp1109I	GCAGC	6 cut(s)	586, 1708, 1712, 1792, 1813, 1822
LweI	GCATC	4 cut(s)	171, 1185, 1300, 1489
MaeI	CTAG	2 cut(s)	44, 1746
MaeII	ACGT	1 cut(s)	1151
MaeIII	GTNAC	3 cut(s)	502, 1139, 1734
MalI	GATC	2 cut(s)	629, 1434
MbiI	CCGCTC	2 cut(s)	192, 275
MboI	GATC	2 cut(s)	627, 1432
MboII	GAAGA	9 cut(s)	131, 353, 511, 928, 1132, 1456, 1465, 1771, 1898
MhlI	GDGCHC	2 cut(s)	171, 675
MluCI	AATT	7 cut(s)	754, 1042, 1165, 1357, 1508, 1562, 1625
MlyI	GAGTC	1 cut(s)	850
MmeI	TCCRAC	5 cut(s)	402, 471, 632, 927, 1524
MroNI	GCCGGC	1 cut(s)	482
MseI	TTAA	6 cut(s)	597, 1056, 1095, 1161, 1395, 1524
MspA1I	CMGCKG	1 cut(s)	1835
MspI	CCGG	9 cut(s)	260, 282, 483, 541, 619, 710, 716, 1145, 1250
MspR9I	CCNGG	5 cut(s)	260, 479, 716, 1145, 1250
Mva1269I	GAATGC	1 cut(s)	928
MvaI	CCWGG	1 cut(s)	479
MvnI	CGCG	1 cut(s)	590
NaeI	GCCGGC	1 cut(s)	484
NciI	CCSGG	4 cut(s)	260, 716, 1145, 1250
NcoI	CCATGG	1 cut(s)	666
NdeII	GATC	2 cut(s)	627, 1432
NgoMIV	GCCGGC	1 cut(s)	482
NlaIII	CATG	1 cut(s)	670
NlaIV	GGNNCC	2 cut(s)	264, 714
NmeAIII	GCCGAG	2 cut(s)	1050, 1829
NmuCI	GTSAC	2 cut(s)	502, 1139
NsbI	TGCGCA	1 cut(s)	1083
NspV	TTCGAA	1 cut(s)	908
PceI	AGGCCT	1 cut(s)	1303
PcsI	WCGNNNNNNNCGW	3 cut(s)	114, 129, 1739
PctI	GAATGC	1 cut(s)	928
PdiI	GCCGGC	1 cut(s)	484
PfeI	GAWTC	4 cut(s)	622, 761, 1171, 1889
PflFI	GACNNNGTC	1 cut(s)	1771
PfoI	TCCNGGA	1 cut(s)	258
PleI	GAGTC	1 cut(s)	849
PpsI	GAGTC	1 cut(s)	849
PsiI	TTATAA	1 cut(s)	1481
Psp124BI	GAGCTC	1 cut(s)	675
Psp6I	CCWGG	1 cut(s)	477
PspFI	CCCAGC	2 cut(s)	423, 805
PspGI	CCWGG	1 cut(s)	477
PspN4I	GGNNCC	2 cut(s)	264, 714
PspPI	GGNCC	2 cut(s)	663, 712
PstNI	CAGNNNCTG	2 cut(s)	1817, 1838
PsyI	GACNNNGTC	1 cut(s)	1771
PvuII	CAGCTG	1 cut(s)	1835
RsaI	GTAC	2 cut(s)	414, 443
RsaNI	GTAC	2 cut(s)	413, 442
SacI	GAGCTC	1 cut(s)	675
SaqAI	TTAA	6 cut(s)	597, 1056, 1095, 1161, 1395, 1524
Sau3AI	GATC	2 cut(s)	627, 1432
Sau96I	GGNCC	2 cut(s)	663, 712
ScaI	AGTACT	1 cut(s)	443
SchI	GAGTC	1 cut(s)	850
ScrFI	CCNGG	5 cut(s)	260, 479, 716, 1145, 1250
SduI	GDGCHC	2 cut(s)	171, 675
SfaNI	GCATC	4 cut(s)	171, 1185, 1300, 1489
SfcI	CTRYAG	1 cut(s)	1776
SfuI	TTCGAA	1 cut(s)	908
SinI	GGWCC	1 cut(s)	712
SmlI	CTYRAG	1 cut(s)	674
SmoI	CTYRAG	1 cut(s)	674
Sse9I	AATT	7 cut(s)	754, 1042, 1165, 1357, 1508, 1562, 1625
SseBI	AGGCCT	1 cut(s)	1303
SspMI	CTAG	2 cut(s)	44, 1746
SstI	GAGCTC	1 cut(s)	675
StuI	AGGCCT	1 cut(s)	1303
StyD4I	CCNGG	5 cut(s)	258, 477, 714, 1143, 1248
StyI	CCWWGG	1 cut(s)	666
TaaI	ACNGT	2 cut(s)	403, 1039
TaiI	ACGT	1 cut(s)	1154
TaqI	TCGA	5 cut(s)	165, 339, 534, 705, 908
TasI	AATT	7 cut(s)	754, 1042, 1165, 1357, 1508, 1562, 1625
TatI	WGTACW	1 cut(s)	441
TfiI	GAWTC	4 cut(s)	622, 761, 1171, 1889
Tru1I	TTAA	6 cut(s)	597, 1056, 1095, 1161, 1395, 1524
Tru9I	TTAA	6 cut(s)	597, 1056, 1095, 1161, 1395, 1524
TscAI	CASTG	1 cut(s)	1792
TseFI	GTSAC	2 cut(s)	502, 1139
TseI	GCWGC	6 cut(s)	574, 1700, 1721, 1805, 1826, 1835
Tsp45I	GTSAC	2 cut(s)	502, 1139
TspDTI	ATGAA	9 cut(s)	460, 850, 863, 912, 935, 1499, 1576, 1638, 1899
TspGWI	ACGGA	2 cut(s)	400, 1731
TspRI	CASTG	1 cut(s)	1792
Tth111I	GACNNNGTC	1 cut(s)	1771
VpaK11BI	GGWCC	1 cut(s)	712
XapI	RAATTY	4 cut(s)	754, 1042, 1357, 1508
XmiI	GTMKAC	2 cut(s)	1259, 1775
XspI	CTAG	2 cut(s)	44, 1746
ZrmI	AGTACT	1 cut(s)	443

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.