RchiOBHm_Chr1g0380901
ERF Family

Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX MLL subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0011056
Physical Location & Seq
Forward (+)
66360305 .. 66366214
5910 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2334 bp
ATGTTTTTCGGTTACTCTGGGAATGAGAACCAAAGGGATTATGCCTGGGTTAAAAGGGGATCACTTTTTCCATTTATGGATTATATAGACAGGTTTCGAGAGCAGTCTGAACTGGGCAACTGCAAGCCCTGTGATTTCCAGATGGCAACTGAGGAGGCATTTTTGGTGGATCAAGGGTTTACTGAGAAGTTGATAGCAGATATAAACATGGCAGCTGGGAACCCAGTGTATGATGAATCCGTACTTAGAGGAGTTCAAGAGGCTACTGGTTCAAATCATGATCTCGACTATCAGTTTGTGGACCAGGACATCTATCGGAAGAAGAAAGATGCAAGAGTCTGTGAAGGCTGTGGCTCGGATCTTAGAATGCCAAAGAAAATGAAGGTTTCAACTTCTGGAGGGCAATTCCTTTGTAAATCATGTGCTAAGTTAACAAAACATGTTTGTGGCATATGCAAGAAGTGGAATCAGCCTGACAGTGGAAGTTGGGTCCGGTGTGATGGTTGCAGGGTATGGGTGCATGCAGAATGTGATAGAATTAACACCAATTATTATAAGAATTTGGGGGGCACTGATTATTTCTGCCCTCCTTGCAAAGTAAAGTTTAACTTTGAATTGTCAGATTCTGAAAAGGAGCAACCAAAAGTCAAGTGTAGATCTACTAAAAATGAGGCACAACTGGTGCTGCCTAACAAGGTTACTGTTCTCTGTAACGGTGTGGAAGGCATATATTTTCCAAGTCTTCACTCTGTTGTGTGCAAGTGTGGGTACTGTGGGACAGAAAAGCAAGCGCTTAGTGAATGGGAGCGACACACAGGTTCCAAGTCCAGAAATTGGAGGACTAGTGTCAGAGTTAAAGGCTCCTTACTGGCACTGGAACAATGGATGCTGCAGTTAGCAGAGTTTCATGAAAATGCTCTTGTGTCTATTAAACCACCTAAACGACCTTCTATTAAAGAACGGAAGCAAAAATTGCTCACTTTTTTGCAAGAAAAGTATGAACCCGTTTATGCGAAGTGGACAACAGAGCGATGTGCTGTATGTAGATGGGTTGAAGACTGGGACTACAACAAAATCATCATATGCAACAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGACATGTCCGGGATTTCACTTCATGGGTTTGCAAATCATGTGAAACACCAGAAGTCAAGAGAGAATGTTGCCTCTGTCCTGTTAAAGGAGGTGCTTTAAAGCCAACTGATATTGAGACATTGTGGGTTCATATTACATGCGCTTGGTTCAGACCTGAAGTGTCGTTTGCAAGTGATGAGAAGATGGAGCCTGCTCTTGGTATCTTGAGTATTCCATCAAATTCTTTTGTCAAGATTTGTGTAATCTGTAAGCAAATTCATGGTTCATGCACACAATGTAGCAGGTGCTCCACTTATTACCATGCAATGTGTGCATCCAGGGCAGGGTACCGCATGGAGTTGCACTCTTTAGAGAAAAATGGGAAACAGATTACAAAAATGGTTTCCTATTGCGCTTATCACAGGGCTCCAAATCCAGATACGGTCTTAATTATACAGACTCCTCTAGGAGTGTTTTCAGCCAAAAGCCTTCTCCAAAGTAAGAAGAGGCCTGGTTCAAGGCTAATTTCATCTAATAGAATTAAGTTGGAAGAGGTTCCAACTGTTGAAACGACTGAACCTGAGCCATTATCTTCTGCAAGGTGCCGAATATTTAAAAGATTGAAAGATAGTAGGAAGAGAACAGAAGAAGAAGCTGTTGCCCACCAAGTGATGGGACATTCCCATCATCCCTTGGAAGCAATTCGAAGTTTGAACAAATTCAGAGTAGTAGAGGAACCTCTAACTTTTTCATCTTTTAGAGAACGGCTTTACCATTTACAGAGAACCGAAAAAGATCGTGTTTGCTTTGGTAGATCCGGGATACATGGATGGGGTCTCTTTGCACGTAGAAACATTCAAGAAGGAGAAATGGTCCTTGAATACCGTGGTGAACAGGTGAGGCGTAGTATTGCAGATTTGAGGGAGGCACGATATAGATCAGAAGGCAAAGACTGTTACCTTTTTAAGATTAGCGAAGAAGTGGTAGTAGATGCCACCGATAAAGGAAATATAGCACGGCTGATCAATCATTCGTGCATGCCCAATTGTTATGCGAGGATCATGAGTGTTGGTGATGAGGAAAGCCGGATTGTACTTATTGCAAAGACTAATGTATCTGCGGGTGACGAGCTAACGTATGATTACTTGTTTGATCCAAATGAGCCTGATGAATTCAAAGTTCCTTGTCTATGTAAAGCTCCCAACTGCCGGAAATTCATGAATTAG

Protein Analysis

777

Amino Acids

89.12

Weight (kDa)

8.67

Isoelectric Point (pI)

45.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD PF00628 149 - 198 1.6e-07 PHD-finger
PHD_2 PF13831 357 - 391 4.6e-11 PHD-finger
zf-HC5HC2H_2 PF13832 398 - 510 6.3e-28 PHD-zinc-finger like domain
zf-HC5HC2H PF13771 420 - 511 2e-13 PHD-like zinc-binding domain
SET PF00856 646 - 751 4.8e-25 SET domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G27910 AT5G53430
fragaria_vesca FvH4_7g31710 FvH4_7g31710
malus_domestica MD01G1220300.v1.1 MD07G1289800.v1.1
prunus_persica Prupe.2G311000_v2.0.a1
pyrus_communis pycom01g22990 pycom07g26250
rosa_chinensis RchiOBHm_Chr1g0380901
rosa_laevigata RLG00000026264
rosa_multiflora Rmu_sc0002962.1_g000020
rosa_roxburghii Rroxscaffold_4G00278980
rosa_rugosa Rorug01G0425200 Rorug01G0425300
rosa_samantha Rh1AG449100 Rh1BG404800 Rh1CG418800 Rh1DG435200
rosa_wichuraiana Rw1G039150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 555
AarI CACCTGC 1 cut(s) 1401
Acc36I ACCTGC 1 cut(s) 1401
Acc65I GGTACC 1 cut(s) 1455
AccB1I GGYRCC 2 cut(s) 1455, 1710
AccB7I CCANNNNNTGG 2 cut(s) 834, 1780
AciI CCGC 2 cut(s) 1459, 2228
AclWI GGATC 6 cut(s) 67, 177, 366, 1917, 2174, 2255
AcsI RAATTY 6 cut(s) 559, 1348, 1383, 1826, 2279, 2321
AcuI CTGAAG 1 cut(s) 1305
AdeI CACNNNGTG 1 cut(s) 1777
AfaI GTAC 4 cut(s) 243, 770, 1457, 2202
AfeI AGCGCT 1 cut(s) 792
AfiI CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
AflIII ACRYGT 2 cut(s) 439, 1132
AhlI ACTAGT 1 cut(s) 842
AjnI CCWGG 4 cut(s) 44, 303, 1445, 1618
AluBI AGCT 5 cut(s) 215, 1103, 1763, 2239, 2306
AluI AGCT 5 cut(s) 215, 1103, 1763, 2239, 2306
Alw21I GWGCWC 1 cut(s) 1418
Alw26I GTCTC 2 cut(s) 1238, 1949
AlwI GGATC 6 cut(s) 67, 177, 366, 1917, 2174, 2255
AlwNI CAGNNNCTG 1 cut(s) 626
Aor51HI AGCGCT 1 cut(s) 792
AoxI GGCC 1 cut(s) 1616
ApeKI GCWGC 3 cut(s) 212, 685, 889
ApoI RAATTY 6 cut(s) 559, 1348, 1383, 1826, 2279, 2321
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
Asp700I GAANNNNTTC 3 cut(s) 1662, 1809, 1826
Asp718I GGTACC 1 cut(s) 1455
AspLEI GCGC 3 cut(s) 793, 1271, 1523
AspS9I GGNCC 3 cut(s) 301, 490, 1981
AsuC2I CCSGG 2 cut(s) 1139, 1927
AsuHPI GGTGA 4 cut(s) 2009, 2017, 2192, 2243
AsuII TTCGAA 1 cut(s) 1813
AvaII GGWCC 3 cut(s) 301, 490, 1981
BaeGI GKGCMC 1 cut(s) 572
BaeI ACNNNNGTAYC 2 cut(s) 2205, 2238
BanI GGYRCC 2 cut(s) 1455, 1710
BanII GRGCYC 1 cut(s) 1537
BbsI GAAGAC 2 cut(s) 734, 1062
Bbv12I GWGCWC 1 cut(s) 1418
BbvI GCAGC 3 cut(s) 224, 672, 876
BccI CCATC 8 cut(s) 136, 494, 1041, 1306, 1351, 1774, 1800, 1932
BceAI ACGGC 2 cut(s) 1889, 2141
BciT130I CCWGG 4 cut(s) 46, 305, 1447, 1620
BciVI GTATCC 1 cut(s) 1923
BclI TGATCA 1 cut(s) 2130
BcnI CCSGG 2 cut(s) 1139, 1927
BcoDI GTCTC 2 cut(s) 1238, 1949
BcuI ACTAGT 1 cut(s) 842
BfaI CTAG 2 cut(s) 843, 1574
BfmI CTRYAG 1 cut(s) 890
BfoI RGCGCY 1 cut(s) 794
BfuAI ACCTGC 1 cut(s) 1401
BfuI GTATCC 1 cut(s) 1923
BglII AGATCT 1 cut(s) 656
BisI GCNGC 3 cut(s) 213, 686, 890
BlsI GCNGC 3 cut(s) 214, 687, 891
Bme1390I CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
Bme18I GGWCC 3 cut(s) 301, 490, 1981
BmgT120I GGNCC 3 cut(s) 301, 490, 1981
BmrFI CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
BmrI ACTGGG 3 cut(s) 122, 218, 1069
BmsI GCATC 4 cut(s) 319, 876, 1451, 2089
BmuI ACTGGG 3 cut(s) 122, 218, 1069
BoxI GACNNNNGTC 1 cut(s) 845
BpiI GAAGAC 2 cut(s) 734, 1062
BplI GAGNNNNNCTC 2 cut(s) 1457, 1489
BpmI CTGGAG 1 cut(s) 417
Bpu10I CCTNAGC 1 cut(s) 1689
Bpu14I TTCGAA 1 cut(s) 1813
BpuEI CTTGAG 1 cut(s) 1354
BpuMI CCSGG 2 cut(s) 1139, 1927
BsaAI YACGTR 1 cut(s) 1955
BsaBI GATNNNNATC 1 cut(s) 2044
BsaI GGTCTC 1 cut(s) 1949
BsaJI CCNNGG 4 cut(s) 45, 1446, 1800, 1993
BsaWI WCCGGW 1 cut(s) 492
BsaXI ACNNNNNCTCC 4 cut(s) 829, 859, 1965, 1995
Bsc4I CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
Bse1I ACTGG 7 cut(s) 117, 224, 271, 684, 873, 879, 1064
Bse3DI GCAATG 1 cut(s) 1440
Bse8I GATNNNNATC 1 cut(s) 2044
BseBI CCWGG 4 cut(s) 46, 305, 1447, 1620
BseDI CCNNGG 4 cut(s) 45, 1446, 1800, 1993
BseGI GGATG 4 cut(s) 891, 1442, 1795, 1943
BseJI GATNNNNATC 1 cut(s) 2044
BseLI CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
BseMI GCAATG 1 cut(s) 1440
BseMII CTCAG 3 cut(s) 141, 174, 1680
BseNI ACTGG 7 cut(s) 117, 224, 271, 684, 873, 879, 1064
BseRI GAGGAG 3 cut(s) 167, 264, 1560
BseSI GKGCMC 1 cut(s) 572
BseXI GCAGC 3 cut(s) 224, 672, 876
BseYI CCCAGC 1 cut(s) 215
BshFI GGCC 1 cut(s) 1618
BshNI GGYRCC 2 cut(s) 1455, 1710
BsiHKAI GWGCWC 1 cut(s) 1418
BsiSI CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
BslFI GGGAC 3 cut(s) 790, 1076, 1797
BslI CCNNNNNNNGG 7 cut(s) 479, 834, 1214, 1325, 1452, 1780, 2316
BsmAI GTCTC 2 cut(s) 1238, 1949
BsmFI GGGAC 3 cut(s) 790, 1076, 1797
BsmI GAATGC 2 cut(s) 372, 1121
BsnI GGCC 1 cut(s) 1618
Bso31I GGTCTC 1 cut(s) 1949
Bsp119I TTCGAA 1 cut(s) 1813
Bsp1286I GDGCHC 3 cut(s) 572, 1418, 1537
BspACI CCGC 2 cut(s) 1459, 2228
BspANI GGCC 1 cut(s) 1618
BspCNI CTCAG 3 cut(s) 142, 175, 1681
BspHI TCATGA 4 cut(s) 277, 907, 2169, 2325
BspMAI CTGCAG 1 cut(s) 894
BspMI ACCTGC 1 cut(s) 1401
BspPI GGATC 6 cut(s) 67, 177, 366, 1917, 2174, 2255
BspT104I TTCGAA 1 cut(s) 1813
BspT107I GGYRCC 2 cut(s) 1455, 1710
BspTNI GGTCTC 1 cut(s) 1949
BsrDI GCAATG 1 cut(s) 1440
BsrI ACTGG 7 cut(s) 117, 224, 271, 684, 873, 879, 1064
BssECI CCNNGG 4 cut(s) 45, 1446, 1800, 1993
BssT1I CCWWGG 1 cut(s) 1800
Bst2UI CCWGG 4 cut(s) 46, 305, 1447, 1620
Bst4CI ACNGT 8 cut(s) 479, 703, 716, 773, 1552, 1672, 1994, 2063
Bst6I CTCTTC 3 cut(s) 1607, 1653, 1739
BstAPI GCANNNNNTGC 2 cut(s) 973, 1439
BstBAI YACGTR 1 cut(s) 1955
BstBI TTCGAA 1 cut(s) 1813
BstC8I GCNNGC 5 cut(s) 125, 522, 789, 1320, 2147
BstDEI CTNAG 7 cut(s) 150, 183, 245, 362, 426, 794, 1689
BstDSI CCRYGG 1 cut(s) 1993
BstENI CCTNNNNNAGG 1 cut(s) 1212
BstF5I GGATG 4 cut(s) 891, 1442, 1795, 1943
BstH2I RGCGCY 1 cut(s) 794
BstHHI GCGC 3 cut(s) 793, 1271, 1523
BstMAI GTCTC 2 cut(s) 1238, 1949
BstMWI GCNNNNNNNGC 4 cut(s) 591, 973, 1439, 1448
BstNI CCWGG 4 cut(s) 46, 305, 1447, 1620
BstNSI RCATGY 5 cut(s) 443, 524, 1136, 1269, 2149
BstPAI GACNNNNGTC 1 cut(s) 845
BstSCI CCNGG 6 cut(s) 44, 303, 1137, 1445, 1618, 1925
BstSFI CTRYAG 1 cut(s) 890
BstSLI GKGCMC 1 cut(s) 572
BstV1I GCAGC 3 cut(s) 224, 672, 876
BstV2I GAAGAC 2 cut(s) 734, 1062
BstX2I RGATCY 3 cut(s) 358, 656, 1922
BstYI RGATCY 3 cut(s) 358, 656, 1922
BsuI GTATCC 1 cut(s) 1923
BsuRI GGCC 1 cut(s) 1618
BtgI CCRYGG 1 cut(s) 1993
BtgZI GCGATG 1 cut(s) 1045
BtsCI GGATG 4 cut(s) 891, 1442, 1795, 1943
BtsIMutI CAGTG 4 cut(s) 231, 484, 570, 872
BveI ACCTGC 1 cut(s) 1401
Cac8I GCNNGC 5 cut(s) 125, 522, 789, 1320, 2147
CaiI CAGNNNCTG 1 cut(s) 626
CciI TCATGA 4 cut(s) 277, 907, 2169, 2325
CfoI GCGC 3 cut(s) 793, 1271, 1523
Cfr13I GGNCC 3 cut(s) 301, 490, 1981
Csp6I GTAC 4 cut(s) 242, 769, 1456, 2201
CviQI GTAC 4 cut(s) 242, 769, 1456, 2201
DdeI CTNAG 7 cut(s) 150, 183, 245, 362, 426, 794, 1689
DraI TTTAAA 2 cut(s) 1227, 1723
DraIII CACNNNGTG 1 cut(s) 1777
Eam1104I CTCTTC 3 cut(s) 1607, 1653, 1739
EarI CTCTTC 3 cut(s) 1607, 1653, 1739
Eco130I CCWWGG 1 cut(s) 1800
Eco147I AGGCCT 1 cut(s) 1618
Eco24I GRGCYC 1 cut(s) 1537
Eco31I GGTCTC 1 cut(s) 1949
Eco47I GGWCC 3 cut(s) 301, 490, 1981
Eco47III AGCGCT 1 cut(s) 792
Eco57I CTGAAG 1 cut(s) 1305
EcoNI CCTNNNNNAGG 1 cut(s) 1212
EcoRI GAATTC 1 cut(s) 2279
EcoRII CCWGG 4 cut(s) 44, 303, 1445, 1618
EcoT14I CCWWGG 1 cut(s) 1800
EcoT38I GRGCYC 1 cut(s) 1537
ErhI CCWWGG 1 cut(s) 1800
FalI AAGNNNNNCTT 2 cut(s) 593, 625
FaqI GGGAC 3 cut(s) 790, 1076, 1797
FauI CCCGC 1 cut(s) 2221
FauNDI CATATG 2 cut(s) 452, 1082
FbaI TGATCA 1 cut(s) 2130
Fnu4HI GCNGC 3 cut(s) 213, 686, 890
FokI GGATG 4 cut(s) 898, 1429, 1782, 1950
FriOI GRGCYC 1 cut(s) 1537
Fsp4HI GCNGC 3 cut(s) 213, 686, 890
FspBI CTAG 2 cut(s) 843, 1574
GlaI GCGC 3 cut(s) 792, 1270, 1522
GluI GCNGC 3 cut(s) 213, 686, 890
GsaI CCCAGC 1 cut(s) 219
GsuI CTGGAG 1 cut(s) 417
HaeII RGCGCY 1 cut(s) 794
HaeIII GGCC 1 cut(s) 1618
HapII CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
HhaI GCGC 3 cut(s) 793, 1271, 1523
Hin6I GCGC 3 cut(s) 791, 1269, 1521
HinP1I GCGC 3 cut(s) 791, 1269, 1521
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HinfI GANTC 5 cut(s) 236, 336, 466, 623, 1567
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
HphI GGTGA 4 cut(s) 2009, 2017, 2192, 2243
Hpy166II GTNNAC 5 cut(s) 180, 301, 432, 1020, 2000
Hpy188I TCNGA 9 cut(s) 109, 318, 358, 622, 628, 851, 1280, 1832, 2050
Hpy8I GTNNAC 5 cut(s) 180, 301, 432, 1020, 2000
HpyAV CCTTC 7 cut(s) 338, 376, 716, 957, 1607, 1964, 2045
HpyCH4III ACNGT 8 cut(s) 479, 703, 716, 773, 1552, 1672, 1994, 2063
HpyCH4IV ACGT 2 cut(s) 1954, 2243
HpyF10VI GCNNNNNNNGC 4 cut(s) 591, 973, 1439, 1448
HpyF3I CTNAG 7 cut(s) 150, 183, 245, 362, 426, 794, 1689
HpySE526I ACGT 2 cut(s) 1954, 2243
HspAI GCGC 3 cut(s) 791, 1269, 1521
KpnI GGTACC 1 cut(s) 1459
Ksp22I TGATCA 1 cut(s) 2130
KspAI GTTAAC 1 cut(s) 432
LmnI GCTCC 8 cut(s) 634, 805, 866, 1124, 1315, 1421, 1540, 2311
Lsp1109I GCAGC 3 cut(s) 224, 672, 876
LweI GCATC 4 cut(s) 319, 876, 1451, 2089
MaeI CTAG 2 cut(s) 843, 1574
MaeII ACGT 2 cut(s) 1954, 2243
MaeIII GTNAC 5 cut(s) 11, 697, 710, 2063, 2231
MfeI CAATTG 1 cut(s) 2152
MflI RGATCY 3 cut(s) 358, 656, 1922
MhlI GDGCHC 3 cut(s) 572, 1418, 1537
MlyI GAGTC 2 cut(s) 345, 1561
MmeI TCCRAC 2 cut(s) 1635, 1691
MroXI GAANNNNTTC 3 cut(s) 1662, 1809, 1826
MslI CAYNNNNRTG 2 cut(s) 444, 912
MspA1I CMGCKG 1 cut(s) 215
MspI CCGG 5 cut(s) 493, 1138, 1926, 2194, 2317
MspR9I CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
MunI CAATTG 1 cut(s) 2152
Mva1269I GAATGC 2 cut(s) 372, 1121
MvaI CCWGG 4 cut(s) 46, 305, 1447, 1620
MwoI GCNNNNNNNGC 4 cut(s) 591, 973, 1439, 1448
NciI CCSGG 2 cut(s) 1139, 1927
NdeI CATATG 2 cut(s) 452, 1082
NmuCI GTSAC 1 cut(s) 2231
NspI RCATGY 5 cut(s) 443, 524, 1136, 1269, 2149
NspV TTCGAA 1 cut(s) 1813
PaeI GCATGC 2 cut(s) 524, 2149
PagI TCATGA 4 cut(s) 277, 907, 2169, 2325
PaqCI CACCTGC 1 cut(s) 1401
PceI AGGCCT 1 cut(s) 1618
PciI ACATGT 2 cut(s) 439, 1132
PctI GAATGC 2 cut(s) 372, 1121
PdmI GAANNNNTTC 3 cut(s) 1662, 1809, 1826
PfeI GAWTC 3 cut(s) 236, 466, 623
PflMI CCANNNNNTGG 2 cut(s) 834, 1780
PfoI TCCNGGA 2 cut(s) 1137, 1925
PkrI GCNGC 3 cut(s) 214, 687, 891
PleI GAGTC 2 cut(s) 344, 1561
PpsI GAGTC 2 cut(s) 344, 1561
Ppu21I YACGTR 1 cut(s) 1955
PscI ACATGT 2 cut(s) 439, 1132
PshAI GACNNNNGTC 1 cut(s) 845
PsiI TTATAA 1 cut(s) 555
Psp6I CCWGG 4 cut(s) 44, 303, 1445, 1618
PspFI CCCAGC 1 cut(s) 215
PspGI CCWGG 4 cut(s) 44, 303, 1445, 1618
PspPI GGNCC 3 cut(s) 301, 490, 1981
PstI CTGCAG 1 cut(s) 894
PstNI CAGNNNCTG 1 cut(s) 626
PsuI RGATCY 3 cut(s) 358, 656, 1922
PvuII CAGCTG 1 cut(s) 215
RsaI GTAC 4 cut(s) 243, 770, 1457, 2202
RsaNI GTAC 4 cut(s) 242, 769, 1456, 2201
RseI CAYNNNNRTG 2 cut(s) 444, 912
SatI GCNGC 3 cut(s) 213, 686, 890
Sau96I GGNCC 3 cut(s) 301, 490, 1981
SchI GAGTC 2 cut(s) 345, 1561
ScrFI CCNGG 6 cut(s) 46, 305, 1139, 1447, 1620, 1927
SduI GDGCHC 3 cut(s) 572, 1418, 1537
SfaNI GCATC 4 cut(s) 319, 876, 1451, 2089
SfcI CTRYAG 1 cut(s) 890
SfuI TTCGAA 1 cut(s) 1813
SinI GGWCC 3 cut(s) 301, 490, 1981
SmiMI CAYNNNNRTG 2 cut(s) 444, 912
SmlI CTYRAG 1 cut(s) 1333
SmoI CTYRAG 1 cut(s) 1333
SpeI ACTAGT 1 cut(s) 842
SphI GCATGC 2 cut(s) 524, 2149
SseBI AGGCCT 1 cut(s) 1618
SsiI CCGC 2 cut(s) 1459, 2228
SspI AATATT 1 cut(s) 1719
SspMI CTAG 2 cut(s) 843, 1574
StuI AGGCCT 1 cut(s) 1618
StyD4I CCNGG 6 cut(s) 44, 303, 1137, 1445, 1618, 1925
StyI CCWWGG 1 cut(s) 1800
TaaI ACNGT 8 cut(s) 479, 703, 716, 773, 1552, 1672, 1994, 2063
TaiI ACGT 2 cut(s) 1957, 2246
TaqI TCGA 3 cut(s) 97, 285, 1813
TatI WGTACW 1 cut(s) 2200
TfiI GAWTC 3 cut(s) 236, 466, 623
TscAI CASTG 4 cut(s) 231, 484, 577, 879
TseFI GTSAC 1 cut(s) 2231
TseI GCWGC 3 cut(s) 212, 685, 889
Tsp45I GTSAC 1 cut(s) 2231
TspGWI ACGGA 2 cut(s) 229, 976
TspRI CASTG 4 cut(s) 231, 484, 577, 879
Van91I CCANNNNNTGG 2 cut(s) 834, 1780
VpaK11BI GGWCC 3 cut(s) 301, 490, 1981
XagI CCTNNNNNAGG 1 cut(s) 1212
XapI RAATTY 6 cut(s) 559, 1348, 1383, 1826, 2279, 2321
XceI RCATGY 5 cut(s) 443, 524, 1136, 1269, 2149
XmnI GAANNNNTTC 3 cut(s) 1662, 1809, 1826
XspI CTAG 2 cut(s) 843, 1574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.