Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003121

Physical Location & Seq

Genomic Coordinates Reverse (-)

4171761 .. 4179254

Gene Structure 7494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54707

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2610 bp

ATGGCATTTCACGTCGCTTGCCCAATTACATGCCGGCGAATCTGCTTCTGTCCGCTAGGGTTTCCTCGATCCCTCGCCACCGCGAATTCCAAGGCGTGCTTCCTCGACGAGGTCATCAAGGTCCATGACTTTCTCAGCGATCCGTCCGGAATTAGGGCTCGCGGTGACGACGCCAAAACCGTCCAGGTCGCTGTTCCCAAAGTCGCGCCGCCGCCTCCGCCGCCGCCGACGGCTCAGCCTGTTCCGCCGTCGGTGGCTGGAGGAGATGCCGCGGTGACGGCGCTGGTCGATGATGAGTCGGCGGCTGCGGCCTCCGCGCAGGCCAAGCGAGCTGCTCTACAGCGCAAGGCTGCCGCGGATATGGTGGCCGCTGAGGACTTCGCTCGCCGCTTTGAGTCTGGTGATTTGTCGGACACCTCCAGAGGAGTTGTGGGAGAAGAGCAGGGTCAGTCCAATGTTATGTGTCGGATATGCTTTTGTGGTGAAAATGAAGGAAGTCAGAGAGCAAGAAGGATGCTTCCATGTAAAACCTGTGGCAAAAAGTACCATAGGAACTGCTTGAAAACTTGGTCTCAACACAGAGATCTATTTCACTGGAGTTCATGGGCATGCCCTCGTGCCGAATTTGTATGTCGAAGAACAGGAGATCCAAACAAACTTATGTTCTGCAAAAGGTGTGATGGTGCTTACCACTGTTACTGCCAACATCCTTCACATAAGAATGTTTCTGCTGGAGTTTATGTGTGCCCAAAACATACAAAGTGTCACAGCTGTGGGTCAAACGTGCCAGGAAATGGTTTGAGTGTAAGGTGGTTTTTGGGATACACCTGCTGTGATGCATGTGGACGATTATTTGTTAAGGGGAATTATTGCCCTGTTTGCTTGAAGGTTTATAGAGATTCAGAATCAACACCTATGGTCTGCTGTGATATTTGCCAGCGTTGGGTACATTGCCATTGTGATGGGATCAGTGATGAAAAATATCAACAATATCAGTTAGATGGAAATCTCCAGTACAAATGTGCCACATGTCGTGGAGAGTGCCACCAGGTCAAGAATCATGAGGATGCTGCGAAAGAGCTTTGGAAGCGAAAAGACGAAGCTGAACGAGATTTAATTACTAGCTTAAGGGCTGCTGCAGGGTTGCCAGCTCATGAAGAAATATTTTCTATTCCTCCCTATTCTGATGATGAAGAAAATGGCCCTCCAATACCAAAGAGTGAATATGGACGTCCCTTGAAATTGTCTCTCAAAGGATTAGTTGATAAATCGCCAAAAAAGACCAAGGACAGTGGAAAGAAATCTTTAATCAGAATCCCTGCTAAGAAGAAGGAATACCAGGAAATCTCAATCAGTAATACCGAAGCAAATCAGAGTGTTCGAGGACATGATCACCAATACCTTGGGTCGGACAAGAATGATGAGATGCATTCCTCTAAAAATGTAGAACCAGAAGTATATTCTTCACCTCTTGCTGGAAGTGTGAGCCATCCTGAAGAGATTTTCTCTGTCAGTGAGCCAAGCGTATTGAAGCACAAGTTTGTTGATGAAGTGATGTTGAATGGTGGAGATAGGACCTCCAAAGTTCGTATTAAGGGCAAGTCTCATGGTCTGGATAGTGTAGAGGACACTGGGAAGCATGCTGGCAAGTCTAAGCCTGTGAAAGAGAAGAAGCTAGTGATAAACTTTGGTGCAAAAAAGTTAAATATAACTAAATCTCCAAGTTCTGATGCTTCAACCTATCAAAGAGAACATGCTTCGGTGACCTCCAATGGTGGTGAAGATGCAAACCAGAGGACAACAAATACTATGGTGGGAAATAGACATGATGGTTCTGCTAATTTTGGCGATGCTAAAGGTGTCAAAGGTTCAAAGGTTGCTGGAAGAGAAGGAAATATTATAAAGTTGGGAAAGGCTAGGTCAGGAGCTCCAGATCATAACCCCAAATTTGTGAAAGGTGATAGGGTTGAGGAAGACGAAGGCATTCCTCCGGAGCAGGCGCATGTTTCATCCGGAAAAAGCATTGAAGGAGGCATGACGGCAAGTGAGCCTGCAGTTGAGATCCCCACTATGAGAAATAACAAGGTATACTCAAGGAAGCACTCAGAAAGCAGGTCTGCTGTATCTGCTCATAGGAATGATGATTCTGGCCAAACACCAGTTTCAGTTTCTTCCTCCAAAGATCATAAGCCTTTGTTGAAGTTTAAGCTTAAGAAACCCAATGTTGAAAGCCAGAGTTCTTCTCAGCATGAAGAAGAAAAAAGCTCTGTTAAGGGTCAACGGTCAAAAAGAAAGAGACCATCACCGTTTATGGAGAAAACATCATTTAGTGAAAATGATGATAGGGGACCGTCGGTTGAAGATAATTTAATGGATGAGATCATGGATGCTAATTGGATATTGAAAAAGTTGGGAAAAGATGCAGTTGGAAAACGAGTTGAAGTACAGCAGCTATCGGACAATTCATGGCACAAAGGAGTCGTTAGTGATGTTATTGAAGGCACATCACTGTTATCTGTTACTTTAGATGATGGCAAAGTCAAATCTCTGGAACTTGGAAAGCAAGGGGTTCGCTTTGTATCCCAAAAGCAGAAGAGGTCAAGAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

869

Amino Acids

95.43

Weight (kDa)

8.9

Isoelectric Point (pI)

46.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G08020
fragaria_vesca	FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200
malus_domestica	MD02G1308700.v1.1 MD07G1013100.v1.1
prunus_persica	Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1
pyrus_communis	pycom02g26000 pycom07g01070
rosa_chinensis	RchiOBHm_Chr1g0316671 RchiOBHm_Chr6g0268061 RchiOBHm_Chr6g0268071
rosa_laevigata	RLG00000030643 RLG00000030647
rosa_multiflora	Rmu_sc0002667.1_g000007 Rmu_sc0005539.1_g000009 Rmu_sc0020006.1_g000001
rosa_roxburghii	Rroxscaffold_4G00330870
rosa_rugosa	Rorug01G0012200
rosa_samantha	Rh1AG022600 Rh1BG021100 Rh1CG019700 Rh1DG017100
rosa_wichuraiana	Rw1G001450 Rw1G001600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1901
AarI	CACCTGC	1 cut(s)	836
AatII	GACGTC	1 cut(s)	1234
Acc36I	ACCTGC	2 cut(s)	836, 2103
AccB7I	CCANNNNNTGG	1 cut(s)	794
AccI	GTMKAC	1 cut(s)	2088
AccII	CGCG	6 cut(s)	83, 162, 206, 272, 317, 356
AccIII	TCCGGA	3 cut(s)	146, 1990, 2012
AclWI	GGATC	5 cut(s)	63, 134, 641, 974, 2056
AcoI	YGGCCR	2 cut(s)	366, 2149
AcsI	RAATTY	3 cut(s)	85, 623, 1946
AcuI	CTGAAG	1 cut(s)	1515
AcyI	GRCGYC	2 cut(s)	171, 1231
AfaI	GTAC	4 cut(s)	545, 948, 1016, 2445
AfiI	CCNNNNNNNGG	6 cut(s)	109, 153, 794, 943, 1408, 1475
AflII	CTTAAG	2 cut(s)	1126, 2210
AflIII	ACRYGT	1 cut(s)	1028
AjiI	CACGTC	1 cut(s)	13
AjnI	CCWGG	4 cut(s)	183, 787, 1047, 1338
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
AleI	CACNNNNGTG	1 cut(s)	771
AloI	GAACNNNNNNTCC	2 cut(s)	631, 663
Alw21I	GWGCWC	1 cut(s)	1930
Alw26I	GTCTC	4 cut(s)	576, 1251, 1608, 2290
AlwI	GGATC	5 cut(s)	63, 134, 641, 974, 2056
Aor13HI	TCCGGA	3 cut(s)	146, 1990, 2012
AoxI	GGCC	5 cut(s)	309, 321, 366, 1201, 2149
ApeKI	GCWGC	7 cut(s)	305, 332, 350, 1070, 1133, 1136, 2449
ApoI	RAATTY	3 cut(s)	85, 623, 1946
Asp700I	GAANNNNTTC	1 cut(s)	1983
AspLEI	GCGC	5 cut(s)	208, 283, 319, 345, 2002
AspS9I	GGNCC	4 cut(s)	121, 1202, 1575, 2348
AvaII	GGWCC	3 cut(s)	121, 1575, 2348
BaeGI	GKGCMC	1 cut(s)	749
BalI	TGGCCA	1 cut(s)	2151
BanII	GRGCYC	2 cut(s)	160, 1930
BarI	GAAGNNNNNNTAC	2 cut(s)	1319, 1351
BauI	CACGAG	1 cut(s)	615
BbsI	GAAGAC	1 cut(s)	1980
Bbv12I	GWGCWC	1 cut(s)	1930
BbvCI	CCTCAGC	1 cut(s)	372
BbvI	GCAGC	7 cut(s)	292, 319, 337, 1057, 1120, 1123, 2461
BccI	CCATC	7 cut(s)	674, 956, 995, 1497, 1823, 2308, 2525
BceAI	ACGGC	4 cut(s)	232, 246, 294, 2055
BcgI	CGANNNNNNTGC	2 cut(s)	2552, 2586
BciT130I	CCWGG	4 cut(s)	185, 789, 1049, 1340
BciVI	GTATCC	2 cut(s)	815, 2590
BclI	TGATCA	1 cut(s)	1390
BcoDI	GTCTC	4 cut(s)	576, 1251, 1608, 2290
BfaI	CTAG	4 cut(s)	56, 1122, 1676, 1917
BfmI	CTRYAG	3 cut(s)	338, 1137, 2052
BfoI	RGCGCY	1 cut(s)	284
BfrI	CTTAAG	2 cut(s)	1126, 2210
BfuAI	ACCTGC	2 cut(s)	836, 2103
BfuI	GTATCC	2 cut(s)	815, 2590
BglII	AGATCT	1 cut(s)	583
BlpI	GCTNAGC	1 cut(s)	234
Bme1390I	CCNGG	4 cut(s)	185, 789, 1049, 1340
Bme18I	GGWCC	3 cut(s)	121, 1575, 2348
BmgBI	CACGTC	1 cut(s)	13
BmgT120I	GGNCC	4 cut(s)	121, 1202, 1575, 2348
BmiI	GGNNCC	1 cut(s)	2349
BmrFI	CCNGG	4 cut(s)	185, 789, 1049, 1340
BmrI	ACTGGG	1 cut(s)	1641
BmuI	ACTGGG	1 cut(s)	1641
BpiI	GAAGAC	1 cut(s)	1980
BplI	GAGNNNNNCTC	4 cut(s)	1490, 1522, 2227, 2259
BpmI	CTGGAG	6 cut(s)	279, 403, 616, 753, 995, 1914
Bpu10I	CCTNAGC	1 cut(s)	372
Bpu1102I	GCTNAGC	1 cut(s)	234
BpuEI	CTTGAG	1 cut(s)	2077
BsaBI	GATNNNNATC	1 cut(s)	1005
BsaHI	GRCGYC	2 cut(s)	171, 1231
BsaI	GGTCTC	2 cut(s)	576, 2290
BsaJI	CCNNGG	5 cut(s)	90, 270, 354, 1284, 1402
BsaWI	WCCGGW	3 cut(s)	146, 1990, 2012
BsaXI	ACNNNNNCTCC	4 cut(s)	726, 756, 1702, 1732
Bsc4I	CCNNNNNNNGG	6 cut(s)	109, 153, 794, 943, 1408, 1475
Bse118I	RCCGGY	1 cut(s)	33
Bse1I	ACTGG	4 cut(s)	599, 1012, 1636, 2159
Bse3DI	GCAATG	1 cut(s)	949
Bse8I	GATNNNNATC	1 cut(s)	1005
BseAI	TCCGGA	3 cut(s)	146, 1990, 2012
BseBI	CCWGG	4 cut(s)	185, 789, 1049, 1340
BseDI	CCNNGG	5 cut(s)	90, 270, 354, 1284, 1402
BseGI	GGATG	7 cut(s)	519, 706, 1072, 1489, 2009, 2380, 2392
BseJI	GATNNNNATC	1 cut(s)	1005
BseLI	CCNNNNNNNGG	6 cut(s)	109, 153, 794, 943, 1408, 1475
BseMI	GCAATG	1 cut(s)	949
BseMII	CTCAG	5 cut(s)	148, 248, 363, 2118, 2258
BseNI	ACTGG	4 cut(s)	599, 1012, 1636, 2159
BseRI	GAGGAG	2 cut(s)	276, 438
BseSI	GKGCMC	1 cut(s)	749
BseXI	GCAGC	7 cut(s)	292, 319, 337, 1057, 1120, 1123, 2461
Bsh1236I	CGCG	6 cut(s)	83, 162, 206, 272, 317, 356
BshFI	GGCC	5 cut(s)	311, 323, 368, 1203, 2151
BsiHKAI	GWGCWC	1 cut(s)	1930
BsiSI	CCGG	4 cut(s)	34, 147, 1991, 2013
BslFI	GGGAC	2 cut(s)	1218, 2361
BslI	CCNNNNNNNGG	6 cut(s)	109, 153, 794, 943, 1408, 1475
BsmAI	GTCTC	4 cut(s)	576, 1251, 1608, 2290
BsmFI	GGGAC	2 cut(s)	1218, 2361
BsmI	GAATGC	2 cut(s)	1429, 1983
BsnI	GGCC	5 cut(s)	311, 323, 368, 1203, 2151
Bso31I	GGTCTC	2 cut(s)	576, 2290
Bsp1286I	GDGCHC	3 cut(s)	160, 749, 1930
Bsp13I	TCCGGA	3 cut(s)	146, 1990, 2012
Bsp1720I	GCTNAGC	1 cut(s)	234
BspANI	GGCC	5 cut(s)	311, 323, 368, 1203, 2151
BspCNI	CTCAG	5 cut(s)	147, 247, 364, 2117, 2257
BspEI	TCCGGA	3 cut(s)	146, 1990, 2012
BspFNI	CGCG	6 cut(s)	83, 162, 206, 272, 317, 356
BspHI	TCATGA	2 cut(s)	1060, 1153
BspLI	GGNNCC	1 cut(s)	2349
BspMAI	CTGCAG	2 cut(s)	1141, 2056
BspMI	ACCTGC	2 cut(s)	836, 2103
BspPI	GGATC	5 cut(s)	63, 134, 641, 974, 2056
BspQI	GCTCTTC	1 cut(s)	432
BspTI	CTTAAG	2 cut(s)	1126, 2210
BspTNI	GGTCTC	2 cut(s)	576, 2290
BsrDI	GCAATG	1 cut(s)	949
BsrFI	RCCGGY	1 cut(s)	33
BsrI	ACTGG	4 cut(s)	599, 1012, 1636, 2159
BssAI	RCCGGY	1 cut(s)	33
BssECI	CCNNGG	5 cut(s)	90, 270, 354, 1284, 1402
BssNAI	GTATAC	1 cut(s)	2089
BssNI	GRCGYC	2 cut(s)	171, 1231
BssSI	CACGAG	1 cut(s)	615
BssT1I	CCWWGG	3 cut(s)	90, 1284, 1402
Bst1107I	GTATAC	1 cut(s)	2089
Bst2BI	CACGAG	1 cut(s)	615
Bst2UI	CCWGG	4 cut(s)	185, 789, 1049, 1340
Bst4CI	ACNGT	7 cut(s)	181, 695, 1292, 2283, 2307, 2352, 2511
Bst6I	CTCTTC	4 cut(s)	432, 1491, 1879, 2588
BstACI	GRCGYC	2 cut(s)	171, 1231
BstAFI	CTTAAG	2 cut(s)	1126, 2210
BstDEI	CTNAG	7 cut(s)	134, 234, 372, 1323, 1653, 2104, 2244
BstDSI	CCRYGG	2 cut(s)	270, 354
BstEII	GGTNACC	1 cut(s)	1762
BstENI	CCTNNNNNAGG	1 cut(s)	107
BstF5I	GGATG	7 cut(s)	519, 706, 1072, 1489, 2009, 2380, 2392
BstFNI	CGCG	6 cut(s)	83, 162, 206, 272, 317, 356
BstH2I	RGCGCY	1 cut(s)	284
BstHHI	GCGC	5 cut(s)	208, 283, 319, 345, 2002
BstMAI	GTCTC	4 cut(s)	576, 1251, 1608, 2290
BstNI	CCWGG	4 cut(s)	185, 789, 1049, 1340
BstNSI	RCATGY	7 cut(s)	33, 612, 843, 1032, 1643, 1757, 2006
BstPI	GGTNACC	1 cut(s)	1762
BstSCI	CCNGG	4 cut(s)	183, 787, 1047, 1338
BstSFI	CTRYAG	3 cut(s)	338, 1137, 2052
BstSLI	GKGCMC	1 cut(s)	749
BstUI	CGCG	6 cut(s)	83, 162, 206, 272, 317, 356
BstV1I	GCAGC	7 cut(s)	292, 319, 337, 1057, 1120, 1123, 2461
BstV2I	GAAGAC	1 cut(s)	1980
BstX2I	RGATCY	3 cut(s)	583, 646, 2061
BstXI	CCANNNNNNTGG	2 cut(s)	962, 1403
BstYI	RGATCY	3 cut(s)	583, 646, 2061
BstZ17I	GTATAC	1 cut(s)	2089
BsuI	GTATCC	2 cut(s)	815, 2590
BsuRI	GGCC	5 cut(s)	311, 323, 368, 1203, 2151
BtgI	CCRYGG	2 cut(s)	270, 354
BtgZI	GCGATG	1 cut(s)	1863
BtrI	CACGTC	1 cut(s)	13
BtsCI	GGATG	7 cut(s)	519, 706, 1072, 1489, 2009, 2380, 2392
BtsIMutI	CAGTG	7 cut(s)	592, 691, 976, 1297, 1519, 1629, 2507
BveI	ACCTGC	2 cut(s)	836, 2103
CciI	TCATGA	2 cut(s)	1060, 1153
CfoI	GCGC	5 cut(s)	208, 283, 319, 345, 2002
Cfr10I	RCCGGY	1 cut(s)	33
Cfr13I	GGNCC	4 cut(s)	121, 1202, 1575, 2348
Cfr42I	CCGCGG	2 cut(s)	273, 357
CseI	GACGC	1 cut(s)	179
CsiI	ACCWGGT	1 cut(s)	1047
Csp6I	GTAC	4 cut(s)	544, 947, 1015, 2444
CspCI	CAANNNNNGTGG	2 cut(s)	1273, 1308
CviQI	GTAC	4 cut(s)	544, 947, 1015, 2444
DdeI	CTNAG	7 cut(s)	134, 234, 372, 1323, 1653, 2104, 2244
EaeI	YGGCCR	2 cut(s)	366, 2149
Eam1104I	CTCTTC	4 cut(s)	432, 1491, 1879, 2588
EarI	CTCTTC	4 cut(s)	432, 1491, 1879, 2588
EciI	GGCGGA	2 cut(s)	207, 234
Ecl136II	GAGCTC	1 cut(s)	1928
Eco130I	CCWWGG	3 cut(s)	90, 1284, 1402
Eco24I	GRGCYC	2 cut(s)	160, 1930
Eco31I	GGTCTC	2 cut(s)	576, 2290
Eco47I	GGWCC	3 cut(s)	121, 1575, 2348
Eco53kI	GAGCTC	1 cut(s)	1928
Eco57I	CTGAAG	1 cut(s)	1515
Eco91I	GGTNACC	1 cut(s)	1762
EcoICRI	GAGCTC	1 cut(s)	1928
EcoNI	CCTNNNNNAGG	1 cut(s)	107
EcoO109I	RGGNCCY	1 cut(s)	1575
EcoO65I	GGTNACC	1 cut(s)	1762
EcoRI	GAATTC	1 cut(s)	85
EcoRII	CCWGG	4 cut(s)	183, 787, 1047, 1338
EcoT14I	CCWWGG	3 cut(s)	90, 1284, 1402
EcoT22I	ATGCAT	2 cut(s)	841, 1431
EcoT38I	GRGCYC	2 cut(s)	160, 1930
ErhI	CCWWGG	3 cut(s)	90, 1284, 1402
FalI	AAGNNNNNCTT	2 cut(s)	83, 115
FaqI	GGGAC	2 cut(s)	1218, 2361
FbaI	TGATCA	1 cut(s)	1390
FblI	GTMKAC	1 cut(s)	2088
FokI	GGATG	7 cut(s)	526, 693, 1079, 1476, 1996, 2387, 2399
FriOI	GRGCYC	2 cut(s)	160, 1930
FspBI	CTAG	4 cut(s)	56, 1122, 1676, 1917
GlaI	GCGC	5 cut(s)	207, 282, 318, 344, 2001
GsuI	CTGGAG	6 cut(s)	279, 403, 616, 753, 995, 1914
HaeII	RGCGCY	1 cut(s)	284
HaeIII	GGCC	5 cut(s)	311, 323, 368, 1203, 2151
HapII	CCGG	4 cut(s)	34, 147, 1991, 2013
HgaI	GACGC	1 cut(s)	179
HhaI	GCGC	5 cut(s)	208, 283, 319, 345, 2002
Hin1I	GRCGYC	2 cut(s)	171, 1231
Hin6I	GCGC	5 cut(s)	206, 281, 317, 343, 2000
HinP1I	GCGC	5 cut(s)	206, 281, 317, 343, 2000
HincII	GTYRAC	1 cut(s)	2279
HindII	GTYRAC	1 cut(s)	2279
HindIII	AAGCTT	1 cut(s)	2207
HinfI	GANTC	9 cut(s)	39, 296, 395, 899, 905, 1057, 1314, 2144, 2478
HpaII	CCGG	4 cut(s)	34, 147, 1991, 2013
Hpy166II	GTNNAC	3 cut(s)	845, 2089, 2279
Hpy8I	GTNNAC	3 cut(s)	845, 2089, 2279
Hpy99I	CGWCG	6 cut(s)	17, 110, 173, 232, 253, 2356
HpyAV	CCTTC	9 cut(s)	485, 504, 720, 880, 1324, 1883, 1973, 2021, 2492
HpyCH4III	ACNGT	7 cut(s)	181, 695, 1292, 2283, 2307, 2352, 2511
HpyCH4IV	ACGT	3 cut(s)	12, 783, 1231
HpyCH4V	TGCA	8 cut(s)	669, 839, 1139, 1429, 1694, 1787, 2054, 2423
HpyF3I	CTNAG	7 cut(s)	134, 234, 372, 1323, 1653, 2104, 2244
HpySE526I	ACGT	3 cut(s)	12, 783, 1231
Hsp92I	GRCGYC	2 cut(s)	171, 1231
HspAI	GCGC	5 cut(s)	206, 281, 317, 343, 2000
Kpn2I	TCCGGA	3 cut(s)	146, 1990, 2012
KroI	GCCGGC	1 cut(s)	33
KroNI	GCCGGC	1 cut(s)	35
Ksp22I	TGATCA	1 cut(s)	1390
KspI	CCGCGG	2 cut(s)	273, 357
LguI	GCTCTTC	1 cut(s)	432
LmnI	GCTCC	3 cut(s)	1925, 1933, 1993
Lsp1109I	GCAGC	7 cut(s)	292, 319, 337, 1057, 1120, 1123, 2461
MabI	ACCWGGT	1 cut(s)	1047
MaeI	CTAG	4 cut(s)	56, 1122, 1676, 1917
MaeII	ACGT	3 cut(s)	12, 783, 1231
MaeIII	GTNAC	6 cut(s)	164, 274, 695, 764, 1762, 2518
MflI	RGATCY	3 cut(s)	583, 646, 2061
MhlI	GDGCHC	3 cut(s)	160, 749, 1930
MlsI	TGGCCA	1 cut(s)	2151
MluNI	TGGCCA	1 cut(s)	2151
MlyI	GAGTC	3 cut(s)	305, 404, 2487
MmeI	TCCRAC	4 cut(s)	390, 446, 1389, 2407
Mox20I	TGGCCA	1 cut(s)	2151
Mph1103I	ATGCAT	2 cut(s)	841, 1431
MroI	TCCGGA	3 cut(s)	146, 1990, 2012
MroNI	GCCGGC	1 cut(s)	33
MroXI	GAANNNNTTC	1 cut(s)	1983
MscI	TGGCCA	1 cut(s)	2151
MslI	CAYNNNNRTG	6 cut(s)	607, 720, 771, 960, 1065, 2136
Msp20I	TGGCCA	1 cut(s)	2151
MspA1I	CMGCKG	4 cut(s)	272, 356, 371, 771
MspCI	CTTAAG	2 cut(s)	1126, 2210
MspI	CCGG	4 cut(s)	34, 147, 1991, 2013
MspR9I	CCNGG	4 cut(s)	185, 789, 1049, 1340
Mva1269I	GAATGC	2 cut(s)	1429, 1983
MvaI	CCWGG	4 cut(s)	185, 789, 1049, 1340
MvnI	CGCG	6 cut(s)	83, 162, 206, 272, 317, 356
NaeI	GCCGGC	1 cut(s)	35
NgoMIV	GCCGGC	1 cut(s)	33
NlaIV	GGNNCC	1 cut(s)	2349
NmuCI	GTSAC	4 cut(s)	164, 274, 764, 1762
NsiI	ATGCAT	2 cut(s)	841, 1431
NspI	RCATGY	7 cut(s)	33, 612, 843, 1032, 1643, 1757, 2006
OliI	CACNNNNGTG	1 cut(s)	771
PaeI	GCATGC	2 cut(s)	612, 1643
PagI	TCATGA	2 cut(s)	1060, 1153
PaqCI	CACCTGC	1 cut(s)	836
PciI	ACATGT	1 cut(s)	1028
PciSI	GCTCTTC	1 cut(s)	432
PcsI	WCGNNNNNNNCGW	1 cut(s)	177
PctI	GAATGC	2 cut(s)	1429, 1983
PdiI	GCCGGC	1 cut(s)	35
PdmI	GAANNNNTTC	1 cut(s)	1983
PfeI	GAWTC	6 cut(s)	39, 899, 905, 1057, 1314, 2144
PflFI	GACNNNGTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	794
PleI	GAGTC	3 cut(s)	304, 403, 2486
PpsI	GAGTC	3 cut(s)	304, 403, 2486
PpuMI	RGGWCCY	1 cut(s)	1575
PscI	ACATGT	1 cut(s)	1028
PsiI	TTATAA	1 cut(s)	1901
Psp124BI	GAGCTC	1 cut(s)	1930
Psp5II	RGGWCCY	1 cut(s)	1575
Psp6I	CCWGG	4 cut(s)	183, 787, 1047, 1338
PspEI	GGTNACC	1 cut(s)	1762
PspGI	CCWGG	4 cut(s)	183, 787, 1047, 1338
PspN4I	GGNNCC	1 cut(s)	2349
PspPI	GGNCC	4 cut(s)	121, 1202, 1575, 2348
PspPPI	RGGWCCY	1 cut(s)	1575
PstI	CTGCAG	2 cut(s)	1141, 2056
PsuI	RGATCY	3 cut(s)	583, 646, 2061
PsyI	GACNNNGTC	1 cut(s)	110
PvuII	CAGCTG	1 cut(s)	771
RsaI	GTAC	4 cut(s)	545, 948, 1016, 2445
RsaNI	GTAC	4 cut(s)	544, 947, 1015, 2444
RseI	CAYNNNNRTG	6 cut(s)	607, 720, 771, 960, 1065, 2136
SacI	GAGCTC	1 cut(s)	1930
SacII	CCGCGG	2 cut(s)	273, 357
SapI	GCTCTTC	1 cut(s)	432
Sau96I	GGNCC	4 cut(s)	121, 1202, 1575, 2348
SchI	GAGTC	3 cut(s)	305, 404, 2487
ScrFI	CCNGG	4 cut(s)	185, 789, 1049, 1340
SduI	GDGCHC	3 cut(s)	160, 749, 1930
SexAI	ACCWGGT	1 cut(s)	1047
SfcI	CTRYAG	3 cut(s)	338, 1137, 2052
Sfr303I	CCGCGG	2 cut(s)	273, 357
SgrBI	CCGCGG	2 cut(s)	273, 357
SinI	GGWCC	3 cut(s)	121, 1575, 2348
SmiMI	CAYNNNNRTG	6 cut(s)	607, 720, 771, 960, 1065, 2136
SmlI	CTYRAG	3 cut(s)	1126, 2092, 2210
SmoI	CTYRAG	3 cut(s)	1126, 2092, 2210
SphI	GCATGC	2 cut(s)	612, 1643
SspI	AATATT	2 cut(s)	1164, 1897
SspMI	CTAG	4 cut(s)	56, 1122, 1676, 1917
SstI	GAGCTC	1 cut(s)	1930
StyD4I	CCNGG	4 cut(s)	183, 787, 1047, 1338
StyI	CCWWGG	3 cut(s)	90, 1284, 1402
TaaI	ACNGT	7 cut(s)	181, 695, 1292, 2283, 2307, 2352, 2511
TaiI	ACGT	3 cut(s)	15, 786, 1234
TaqI	TCGA	5 cut(s)	67, 105, 288, 634, 1381
TatI	WGTACW	2 cut(s)	1014, 2443
TfiI	GAWTC	6 cut(s)	39, 899, 905, 1057, 1314, 2144
TscAI	CASTG	7 cut(s)	599, 698, 976, 1297, 1519, 1636, 2514
TseFI	GTSAC	4 cut(s)	164, 274, 764, 1762
TseI	GCWGC	7 cut(s)	305, 332, 350, 1070, 1133, 1136, 2449
Tsp45I	GTSAC	4 cut(s)	164, 274, 764, 1762
TspDTI	ATGAA	9 cut(s)	504, 591, 990, 1170, 1206, 1563, 1998, 2265, 2454
TspGWI	ACGGA	1 cut(s)	132
TspRI	CASTG	7 cut(s)	599, 698, 976, 1297, 1519, 1636, 2514
Tth111I	GACNNNGTC	1 cut(s)	110
Van91I	CCANNNNNTGG	1 cut(s)	794
Vha464I	CTTAAG	2 cut(s)	1126, 2210
VpaK11BI	GGWCC	3 cut(s)	121, 1575, 2348
XagI	CCTNNNNNAGG	1 cut(s)	107
XapI	RAATTY	3 cut(s)	85, 623, 1946
XceI	RCATGY	7 cut(s)	33, 612, 843, 1032, 1643, 1757, 2006
XcmI	CCANNNNNNNNNTGG	1 cut(s)	427
XmiI	GTMKAC	1 cut(s)	2088
XmnI	GAANNNNTTC	1 cut(s)	1983
XspI	CTAG	4 cut(s)	56, 1122, 1676, 1917
ZraI	GACGTC	1 cut(s)	1232
Zsp2I	ATGCAT	2 cut(s)	841, 1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.