PHD finger family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08020 |
| fragaria_vesca | FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 FvH4_7g01200 |
| malus_domestica | MD02G1308700.v1.1 MD07G1013100.v1.1 |
| prunus_persica | Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 Prupe.2G016600_v2.0.a1 |
| pyrus_communis | pycom02g26000 pycom07g01070 |
| rosa_chinensis | RchiOBHm_Chr1g0316671 RchiOBHm_Chr6g0268061 RchiOBHm_Chr6g0268071 |
| rosa_laevigata | RLG00000030643 RLG00000030647 |
| rosa_multiflora | Rmu_sc0002667.1_g000007 Rmu_sc0005539.1_g000009 Rmu_sc0020006.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00330870 |
| rosa_rugosa | Rorug01G0012200 |
| rosa_samantha | Rh1AG022600 Rh1BG021100 Rh1CG019700 Rh1DG017100 |
| rosa_wichuraiana | Rw1G001450 Rw1G001600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 48 |
| AgsI | TTSAA | 3 cut(s) | 7, 44, 101 |
| AluBI | AGCT | 1 cut(s) | 55 |
| AluI | AGCT | 1 cut(s) | 55 |
| ApeKI | GCWGC | 1 cut(s) | 52 |
| BbvI | GCAGC | 1 cut(s) | 64 |
| BccI | CCATC | 1 cut(s) | 128 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 155, 189 |
| BciVI | GTATCC | 1 cut(s) | 193 |
| BfaI | CTAG | 1 cut(s) | 158 |
| BfuI | GTATCC | 1 cut(s) | 193 |
| BisI | GCNGC | 1 cut(s) | 53 |
| BlsI | GCNGC | 1 cut(s) | 54 |
| BmsI | GCATC | 1 cut(s) | 13 |
| BseXI | GCAGC | 1 cut(s) | 64 |
| Bst4CI | ACNGT | 1 cut(s) | 114 |
| Bst6I | CTCTTC | 1 cut(s) | 191 |
| BstV1I | GCAGC | 1 cut(s) | 64 |
| BsuI | GTATCC | 1 cut(s) | 193 |
| BtsIMutI | CAGTG | 1 cut(s) | 110 |
| Csp6I | GTAC | 1 cut(s) | 47 |
| CviAII | CATG | 2 cut(s) | 69, 210 |
| CviJI | RGCY | 1 cut(s) | 55 |
| CviKI_1 | RGCY | 1 cut(s) | 55 |
| CviQI | GTAC | 1 cut(s) | 47 |
| Eam1104I | CTCTTC | 1 cut(s) | 191 |
| EarI | CTCTTC | 1 cut(s) | 191 |
| FaeI | CATG | 2 cut(s) | 72, 213 |
| FaiI | YATR | 2 cut(s) | 70, 211 |
| FatI | CATG | 2 cut(s) | 68, 209 |
| Fnu4HI | GCNGC | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 53 |
| FspBI | CTAG | 1 cut(s) | 158 |
| GluI | GCNGC | 1 cut(s) | 53 |
| Hin1II | CATG | 2 cut(s) | 72, 213 |
| HinfI | GANTC | 1 cut(s) | 81 |
| Hpy188I | TCNGA | 1 cut(s) | 61 |
| Hpy188III | TCNNGA | 2 cut(s) | 152, 204 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyCH4III | ACNGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 2 cut(s) | 26, 193 |
| Hsp92II | CATG | 2 cut(s) | 72, 213 |
| LpnPI | CCDG | 1 cut(s) | 137 |
| Lsp1109I | GCAGC | 1 cut(s) | 64 |
| LweI | GCATC | 1 cut(s) | 13 |
| MaeI | CTAG | 1 cut(s) | 158 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MboII | GAAGA | 1 cut(s) | 208 |
| MluCI | AATT | 1 cut(s) | 64 |
| MlyI | GAGTC | 1 cut(s) | 90 |
| MmeI | TCCRAC | 1 cut(s) | 10 |
| MnlI | CCTC | 1 cut(s) | 192 |
| NlaIII | CATG | 2 cut(s) | 72, 213 |
| PkrI | GCNGC | 1 cut(s) | 54 |
| PleI | GAGTC | 1 cut(s) | 89 |
| PpsI | GAGTC | 1 cut(s) | 89 |
| RsaI | GTAC | 1 cut(s) | 48 |
| RsaNI | GTAC | 1 cut(s) | 47 |
| SatI | GCNGC | 1 cut(s) | 53 |
| SchI | GAGTC | 1 cut(s) | 90 |
| SetI | ASST | 2 cut(s) | 57, 203 |
| SfaNI | GCATC | 1 cut(s) | 13 |
| SgeI | CNNG | 6 cut(s) | 50, 81, 88, 164, 170, 179 |
| Sse9I | AATT | 1 cut(s) | 64 |
| SspMI | CTAG | 1 cut(s) | 158 |
| TaaI | ACNGT | 1 cut(s) | 114 |
| TasI | AATT | 1 cut(s) | 64 |
| TatI | WGTACW | 1 cut(s) | 46 |
| TscAI | CASTG | 1 cut(s) | 117 |
| TseI | GCWGC | 1 cut(s) | 52 |
| TspDTI | ATGAA | 1 cut(s) | 57 |
| TspRI | CASTG | 1 cut(s) | 117 |
| XspI | CTAG | 1 cut(s) | 158 |