RchiOBHm_Chr1g0341641

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
33393218 .. 33393569
352 bp
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UTR
Exon/CDS
Intron
PRQ56832

Sequence Viewer

Length: 150 bp
ATGGAATTGTTGGCTGTGGCATATTCGTCCCTTGTAGCCAAACTGGAGGAGATTATATATAGGTTGGTCATGCTGGAATTTTCAGCCACACAGAAGTATTCTCTTGCATCTAATTCAACTTACAATGTGGAAGAGCCTGGTGATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.5

Weight (kDa)

4.31

Isoelectric Point (pI)

28.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 77
AgsI TTSAA 1 cut(s) 117
AjnI CCWGG 1 cut(s) 136
ApoI RAATTY 1 cut(s) 77
BciT130I CCWGG 1 cut(s) 138
Bme1390I CCNGG 1 cut(s) 138
BmrFI CCNGG 1 cut(s) 138
BmsI GCATC 1 cut(s) 116
BpmI CTGGAG 1 cut(s) 65
Bse1I ACTGG 1 cut(s) 48
BseBI CCWGG 1 cut(s) 138
BseNI ACTGG 1 cut(s) 48
BseRI GAGGAG 1 cut(s) 62
BslFI GGGAC 1 cut(s) 13
BsmFI GGGAC 1 cut(s) 13
Bsp143I GATC 1 cut(s) 142
BspQI GCTCTTC 1 cut(s) 126
BsrI ACTGG 1 cut(s) 48
BssMI GATC 1 cut(s) 142
Bst2UI CCWGG 1 cut(s) 138
Bst6I CTCTTC 1 cut(s) 126
BstKTI GATC 1 cut(s) 145
BstMBI GATC 1 cut(s) 142
BstNI CCWGG 1 cut(s) 138
BstSCI CCNGG 1 cut(s) 136
CviAII CATG 1 cut(s) 70
CviJI RGCY 4 cut(s) 14, 38, 86, 136
CviKI_1 RGCY 4 cut(s) 14, 38, 86, 136
DpnI GATC 1 cut(s) 144
DpnII GATC 1 cut(s) 142
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
EcoRII CCWGG 1 cut(s) 136
FaeI CATG 1 cut(s) 73
FaiI YATR 5 cut(s) 22, 56, 58, 60, 71
FaqI GGGAC 1 cut(s) 13
FatI CATG 1 cut(s) 69
GsuI CTGGAG 1 cut(s) 65
Hin1II CATG 1 cut(s) 73
HpyCH4V TGCA 1 cut(s) 107
Hsp92II CATG 1 cut(s) 73
Kzo9I GATC 1 cut(s) 142
LguI GCTCTTC 1 cut(s) 126
LpnPI CCDG 3 cut(s) 29, 59, 123
LweI GCATC 1 cut(s) 116
MalI GATC 1 cut(s) 144
MboI GATC 1 cut(s) 142
MboII GAAGA 1 cut(s) 143
MluCI AATT 3 cut(s) 5, 77, 112
MnlI CCTC 1 cut(s) 40
MspR9I CCNGG 1 cut(s) 138
MvaI CCWGG 1 cut(s) 138
NdeII GATC 1 cut(s) 142
NlaIII CATG 1 cut(s) 73
PciSI GCTCTTC 1 cut(s) 126
Psp6I CCWGG 1 cut(s) 136
PspGI CCWGG 1 cut(s) 136
SapI GCTCTTC 1 cut(s) 126
Sau3AI GATC 1 cut(s) 142
ScrFI CCNGG 1 cut(s) 138
SetI ASST 1 cut(s) 65
SfaNI GCATC 1 cut(s) 116
SgeI CNNG 5 cut(s) 44, 56, 82, 86, 116
Sse9I AATT 3 cut(s) 5, 77, 112
StyD4I CCNGG 1 cut(s) 136
TasI AATT 3 cut(s) 5, 77, 112
XapI RAATTY 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.