RchiOBHm_Chr3g0482911

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
28991123 .. 28991381
259 bp
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UTR
Exon/CDS
Intron
PRQ44772

Sequence Viewer

Length: 150 bp
ATGGAATTGTTGGTTGTGGCATATTCGTCCCTTGTAGCCAAAATGGAGGAGATTCTATATAGGTTCGTCATGCTGGAATTTTCAGCCACACAGAAGTATTCTCTTGCATCTAATTCAACTTGCAATGTGGAAGATGCTGGTGATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

49

Amino Acids

5.48

Weight (kDa)

4.25

Isoelectric Point (pI)

33.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 77
AgsI TTSAA 1 cut(s) 117
ApoI RAATTY 1 cut(s) 77
BmsI GCATC 2 cut(s) 116, 124
Bse3DI GCAATG 1 cut(s) 130
BseMI GCAATG 1 cut(s) 130
BseRI GAGGAG 1 cut(s) 62
BslFI GGGAC 1 cut(s) 13
BsmFI GGGAC 1 cut(s) 13
Bsp143I GATC 1 cut(s) 142
BsrDI GCAATG 1 cut(s) 130
BssMI GATC 1 cut(s) 142
BstKTI GATC 1 cut(s) 145
BstMBI GATC 1 cut(s) 142
CviAII CATG 1 cut(s) 70
CviJI RGCY 2 cut(s) 38, 86
CviKI_1 RGCY 2 cut(s) 38, 86
DpnI GATC 1 cut(s) 144
DpnII GATC 1 cut(s) 142
FaeI CATG 1 cut(s) 73
FaiI YATR 4 cut(s) 22, 58, 60, 71
FaqI GGGAC 1 cut(s) 13
FatI CATG 1 cut(s) 69
Hin1II CATG 1 cut(s) 73
HinfI GANTC 1 cut(s) 52
HpyCH4V TGCA 2 cut(s) 107, 123
Hsp92II CATG 1 cut(s) 73
Kzo9I GATC 1 cut(s) 142
LpnPI CCDG 2 cut(s) 59, 123
LweI GCATC 2 cut(s) 116, 124
MalI GATC 1 cut(s) 144
MboI GATC 1 cut(s) 142
MboII GAAGA 1 cut(s) 143
MluCI AATT 3 cut(s) 5, 77, 112
MnlI CCTC 1 cut(s) 40
NdeII GATC 1 cut(s) 142
NlaIII CATG 1 cut(s) 73
PfeI GAWTC 1 cut(s) 52
Sau3AI GATC 1 cut(s) 142
SetI ASST 1 cut(s) 65
SfaNI GCATC 2 cut(s) 116, 124
SgeI CNNG 5 cut(s) 44, 82, 86, 116, 132
Sse9I AATT 3 cut(s) 5, 77, 112
TasI AATT 3 cut(s) 5, 77, 112
TfiI GAWTC 1 cut(s) 52
XapI RAATTY 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.