Rh2CG633100

Serine carboxypeptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0006962
Physical Location & Seq
Reverse (-)
80557484 .. 80561368
3885 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG633100.1

Sequence Viewer

Length: 1089 bp
ATGGAAGAGTACGTCAGAGAAGCTCCCCGTGTCTCAATAGTTCGCAAGGAGGTGATTGACAATAAAATTTCTGCCCCCAAGGAAATCTTGGCCATAGAGGACAAAAAGACCAAAGACGATGAGGCACGTCCACCTTCCCCACCTCCACCTAAACCAGTAAAAGTGGTAGCACCTGTAGTTGAACCACTTGATTTGCTGGGTTTGAATGATCCTGTTCCCGATACTGCAGCATTAGATGAGAAGAATGCCATGGCTTTAGCTATTGTTCCAGTTTCTGATCAACCTGCGGCTCAACCTCAAGCAAATGGAACAGGTTGGGAATTGGCACTTGTTACAGCCCCAAGCTCAAATGAGAGTGCCACAGCTACTAGCAAACTGGTGGCCAACATAATCTATACTTCCGATACAAAATCAGCTGCACAGACCTATACTTTCTTAAGAAAGGGAAGGAGAGAAGAATCACAATGGTTATATGCACACCCAAGGTTTCAGGGAAATCAACTGTACATTGGTGGTGACTCATATTCAGGACTTATTGTTCCCATTCTTCTTAAGAATATACTAGAAGGTCACAGTCGGTCAAATTCTGGGTCCAGGCCAAGAATGCAACTCCAAGGATACTTGCTTGGAAATCCAGTTTCAGATTCTTTTATTGATGTAAATGAGAGAATCCCATATGTTCACCGAGTGTCACTCATTTCAGATGAAATCTATGAGTGTCTTCTACAAATAAATCTTGCACAAATTTTGGAACCCCAATGTGCTTTTGCATCTGGTAGAACAACTGAGTTGGATGGGATCTTAGATCTCGAGAAGCAAGTACTATGGATTACCTCCTTTCAGAGTCTAAGCTACCTGAATTGCATTACCGGTTGTGTAGATACTTTTCACGAAGAGAAGAGCAAACGTGAAAGAAGAAAAGGAAACAAAGCTTTGACTATGGAATTATTGGCTGTGGCATATTCGTCCCTTGTAGCCAAAATGGAGGAGATTATACATAGGTTGGCCATGCTGGAATTTTCAGCCACACAGAAGTATTCTCTTGCATCTAATTCAACTTACAATGTGGAAGAGGTTGGTGATCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

362

Amino Acids

40.06

Weight (kDa)

5.27

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 131 - 298 2.5e-22 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 292
AciI CCGC 1 cut(s) 287
AclWI GGATC 2 cut(s) 203, 806
AcoI YGGCCR 3 cut(s) 90, 381, 1005
AcsI RAATTY 4 cut(s) 66, 583, 744, 1016
AdeI CACNNNGTG 1 cut(s) 688
AfaI GTAC 3 cut(s) 11, 506, 822
AflII CTTAAG 2 cut(s) 436, 551
AgeI ACCGGT 1 cut(s) 869
AgsI TTSAA 3 cut(s) 182, 205, 1056
AjiI CACGTC 1 cut(s) 128
AjnI CCWGG 1 cut(s) 593
AloI GAACNNNNNNTCC 2 cut(s) 522, 554
AluBI AGCT 7 cut(s) 23, 260, 345, 365, 416, 852, 932
AluI AGCT 7 cut(s) 23, 260, 345, 365, 416, 852, 932
Alw26I GTCTC 1 cut(s) 37
AlwI GGATC 2 cut(s) 203, 806
AlwNI CAGNNNCTG 1 cut(s) 275
Ama87I CYCGRG 1 cut(s) 809
AoxI GGCC 4 cut(s) 90, 381, 596, 1005
ApeKI GCWGC 2 cut(s) 227, 416
ApoI RAATTY 4 cut(s) 66, 583, 744, 1016
ArsI GACNNNNNNTTYG 2 cut(s) 575, 607
AsiGI ACCGGT 1 cut(s) 869
AspS9I GGNCC 1 cut(s) 591
AsuHPI GGTGA 3 cut(s) 64, 527, 674
AvaI CYCGRG 1 cut(s) 809
AvaII GGWCC 1 cut(s) 591
BalI TGGCCA 3 cut(s) 92, 383, 1007
BbsI GAAGAC 1 cut(s) 713
BbvI GCAGC 2 cut(s) 239, 403
BccI CCATC 1 cut(s) 788
BciT130I CCWGG 1 cut(s) 595
BciVI GTATCC 1 cut(s) 611
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 1 cut(s) 37
BfaI CTAG 2 cut(s) 369, 563
BfmI CTRYAG 2 cut(s) 174, 225
BfrI CTTAAG 2 cut(s) 436, 551
BfuAI ACCTGC 1 cut(s) 292
BfuI GTATCC 1 cut(s) 611
BglII AGATCT 1 cut(s) 805
BisI GCNGC 3 cut(s) 228, 288, 417
BlsI GCNGC 3 cut(s) 229, 289, 418
BmcAI AGTACT 1 cut(s) 822
Bme1390I CCNGG 1 cut(s) 595
Bme18I GGWCC 1 cut(s) 591
BmeT110I CYCGRG 1 cut(s) 809
BmgBI CACGTC 1 cut(s) 128
BmgT120I GGNCC 1 cut(s) 591
BmiI GGNNCC 2 cut(s) 592, 753
BmrFI CCNGG 1 cut(s) 595
BmsI GCATC 2 cut(s) 779, 1055
BpiI GAAGAC 1 cut(s) 713
BplI GAGNNNNNCTC 2 cut(s) 678, 710
BpuEI CTTGAG 1 cut(s) 282
BsaJI CCNNGG 4 cut(s) 78, 249, 482, 613
BsaWI WCCGGW 1 cut(s) 869
Bse118I RCCGGY 1 cut(s) 869
Bse1I ACTGG 4 cut(s) 155, 269, 381, 635
BseBI CCWGG 1 cut(s) 595
BseDI CCNNGG 4 cut(s) 78, 249, 482, 613
BseGI GGATG 1 cut(s) 799
BseMII CTCAG 1 cut(s) 777
BseNI ACTGG 4 cut(s) 155, 269, 381, 635
BseRI GAGGAG 1 cut(s) 1001
BseXI GCAGC 2 cut(s) 239, 403
BseYI CCCAGC 1 cut(s) 196
BsgI GTGCAG 1 cut(s) 402
BshFI GGCC 4 cut(s) 92, 383, 598, 1007
BshTI ACCGGT 1 cut(s) 869
BsiHKCI CYCGRG 1 cut(s) 809
BsiSI CCGG 1 cut(s) 870
BslFI GGGAC 1 cut(s) 952
BsmAI GTCTC 1 cut(s) 37
BsmFI GGGAC 1 cut(s) 952
BsmI GAATGC 2 cut(s) 250, 609
BsnI GGCC 4 cut(s) 92, 383, 598, 1007
BsoBI CYCGRG 1 cut(s) 809
Bsp1407I TGTACA 1 cut(s) 504
Bsp143I GATC 5 cut(s) 208, 277, 798, 805, 1081
Bsp19I CCATGG 1 cut(s) 249
BspACI CCGC 1 cut(s) 287
BspANI GGCC 4 cut(s) 92, 383, 598, 1007
BspCNI CTCAG 1 cut(s) 778
BspLI GGNNCC 2 cut(s) 592, 753
BspMAI CTGCAG 1 cut(s) 229
BspMI ACCTGC 1 cut(s) 292
BspPI GGATC 2 cut(s) 203, 806
BspQI GCTCTTC 1 cut(s) 893
BspTI CTTAAG 2 cut(s) 436, 551
BsrFI RCCGGY 1 cut(s) 869
BsrGI TGTACA 1 cut(s) 504
BsrI ACTGG 4 cut(s) 155, 269, 381, 635
BssAI RCCGGY 1 cut(s) 869
BssECI CCNNGG 4 cut(s) 78, 249, 482, 613
BssMI GATC 5 cut(s) 208, 277, 798, 805, 1081
BssT1I CCWWGG 4 cut(s) 78, 249, 482, 613
Bst2UI CCWGG 1 cut(s) 595
Bst4CI ACNGT 2 cut(s) 504, 575
Bst6I CTCTTC 3 cut(s) 888, 893, 1065
BstAFI CTTAAG 2 cut(s) 436, 551
BstAUI TGTACA 1 cut(s) 504
BstDEI CTNAG 3 cut(s) 786, 802, 848
BstDSI CCRYGG 1 cut(s) 249
BstF5I GGATG 1 cut(s) 799
BstKTI GATC 5 cut(s) 211, 280, 801, 808, 1084
BstMAI GTCTC 1 cut(s) 37
BstMBI GATC 5 cut(s) 208, 277, 798, 805, 1081
BstMWI GCNNNNNNNGC 1 cut(s) 604
BstNI CCWGG 1 cut(s) 595
BstSCI CCNGG 1 cut(s) 593
BstSFI CTRYAG 2 cut(s) 174, 225
BstV1I GCAGC 2 cut(s) 239, 403
BstV2I GAAGAC 1 cut(s) 713
BstX2I RGATCY 2 cut(s) 798, 805
BstYI RGATCY 2 cut(s) 798, 805
BsuI GTATCC 1 cut(s) 611
BsuRI GGCC 4 cut(s) 92, 383, 598, 1007
BtgI CCRYGG 1 cut(s) 249
BtrI CACGTC 1 cut(s) 128
BtsCI GGATG 1 cut(s) 799
BveI ACCTGC 1 cut(s) 292
CaiI CAGNNNCTG 1 cut(s) 275
Cfr10I RCCGGY 1 cut(s) 869
Cfr13I GGNCC 1 cut(s) 591
Csp6I GTAC 3 cut(s) 10, 505, 821
CspAI ACCGGT 1 cut(s) 869
CspCI CAANNNNNGTGG 2 cut(s) 174, 209
CviAII CATG 2 cut(s) 250, 1009
CviQI GTAC 3 cut(s) 10, 505, 821
DdeI CTNAG 3 cut(s) 786, 802, 848
DpnI GATC 5 cut(s) 210, 279, 800, 807, 1083
DpnII GATC 5 cut(s) 208, 277, 798, 805, 1081
DraIII CACNNNGTG 1 cut(s) 688
EaeI YGGCCR 3 cut(s) 90, 381, 1005
Eam1104I CTCTTC 3 cut(s) 888, 893, 1065
EarI CTCTTC 3 cut(s) 888, 893, 1065
Eco130I CCWWGG 4 cut(s) 78, 249, 482, 613
Eco47I GGWCC 1 cut(s) 591
Eco88I CYCGRG 1 cut(s) 809
EcoRII CCWGG 1 cut(s) 593
EcoT14I CCWWGG 4 cut(s) 78, 249, 482, 613
ErhI CCWWGG 4 cut(s) 78, 249, 482, 613
FaeI CATG 2 cut(s) 253, 1012
FalI AAGNNNNNCTT 2 cut(s) 71, 103
FaqI GGGAC 1 cut(s) 952
FatI CATG 2 cut(s) 249, 1008
FauNDI CATATG 1 cut(s) 676
FbaI TGATCA 1 cut(s) 277
Fnu4HI GCNGC 3 cut(s) 228, 288, 417
FokI GGATG 1 cut(s) 806
Fsp4HI GCNGC 3 cut(s) 228, 288, 417
FspBI CTAG 2 cut(s) 369, 563
GluI GCNGC 3 cut(s) 228, 288, 417
GsaI CCCAGC 1 cut(s) 200
HaeIII GGCC 4 cut(s) 92, 383, 598, 1007
HapII CCGG 1 cut(s) 870
Hin1II CATG 2 cut(s) 253, 1012
HindIII AAGCTT 1 cut(s) 930
HinfI GANTC 5 cut(s) 458, 518, 644, 669, 844
HpaII CCGG 1 cut(s) 870
HphI GGTGA 3 cut(s) 64, 527, 674
Hpy166II GTNNAC 2 cut(s) 131, 682
Hpy188I TCNGA 6 cut(s) 17, 277, 403, 643, 703, 843
Hpy188III TCNNGA 5 cut(s) 218, 528, 809, 811, 890
Hpy8I GTNNAC 2 cut(s) 131, 682
HpyAV CCTTC 3 cut(s) 144, 441, 560
HpyCH4III ACNGT 2 cut(s) 504, 575
HpyCH4IV ACGT 3 cut(s) 12, 127, 907
HpyCH4V TGCA 8 cut(s) 227, 419, 476, 607, 740, 770, 864, 1046
HpyF10VI GCNNNNNNNGC 1 cut(s) 604
HpyF3I CTNAG 3 cut(s) 786, 802, 848
HpySE526I ACGT 3 cut(s) 12, 127, 907
Hsp92II CATG 2 cut(s) 253, 1012
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 5 cut(s) 208, 277, 798, 805, 1081
LguI GCTCTTC 1 cut(s) 893
LmnI GCTCC 1 cut(s) 28
Lsp1109I GCAGC 2 cut(s) 239, 403
LweI GCATC 2 cut(s) 779, 1055
MaeI CTAG 2 cut(s) 369, 563
MaeII ACGT 3 cut(s) 12, 127, 907
MaeIII GTNAC 4 cut(s) 331, 515, 569, 690
MalI GATC 5 cut(s) 210, 279, 800, 807, 1083
MboI GATC 5 cut(s) 208, 277, 798, 805, 1081
MboII GAAGA 9 cut(s) 17, 253, 467, 539, 713, 905, 910, 927, 1082
MflI RGATCY 2 cut(s) 798, 805
MlsI TGGCCA 3 cut(s) 92, 383, 1007
MluCI AATT 8 cut(s) 66, 320, 583, 744, 859, 944, 1016, 1051
MluNI TGGCCA 3 cut(s) 92, 383, 1007
MlyI GAGTC 2 cut(s) 512, 853
MmeI TCCRAC 1 cut(s) 771
MnlI CCTC 8 cut(s) 43, 91, 115, 153, 306, 844, 979, 1066
Mox20I TGGCCA 3 cut(s) 92, 383, 1007
MscI TGGCCA 3 cut(s) 92, 383, 1007
MseI TTAA 2 cut(s) 437, 552
Msp20I TGGCCA 3 cut(s) 92, 383, 1007
MspA1I CMGCKG 1 cut(s) 416
MspCI CTTAAG 2 cut(s) 436, 551
MspI CCGG 1 cut(s) 870
MspR9I CCNGG 1 cut(s) 595
Mva1269I GAATGC 2 cut(s) 250, 609
MvaI CCWGG 1 cut(s) 595
MwoI GCNNNNNNNGC 1 cut(s) 604
NcoI CCATGG 1 cut(s) 249
NdeI CATATG 1 cut(s) 676
NdeII GATC 5 cut(s) 208, 277, 798, 805, 1081
NlaIII CATG 2 cut(s) 253, 1012
NlaIV GGNNCC 2 cut(s) 592, 753
NmuCI GTSAC 3 cut(s) 515, 569, 690
PaeR7I CTCGAG 1 cut(s) 809
PciSI GCTCTTC 1 cut(s) 893
PctI GAATGC 2 cut(s) 250, 609
PfeI GAWTC 3 cut(s) 458, 644, 669
PinAI ACCGGT 1 cut(s) 869
PkrI GCNGC 3 cut(s) 229, 289, 418
PleI GAGTC 2 cut(s) 512, 852
PpsI GAGTC 2 cut(s) 512, 852
Psp6I CCWGG 1 cut(s) 593
PspFI CCCAGC 1 cut(s) 196
PspGI CCWGG 1 cut(s) 593
PspN4I GGNNCC 2 cut(s) 592, 753
PspPI GGNCC 1 cut(s) 591
PstI CTGCAG 1 cut(s) 229
PstNI CAGNNNCTG 1 cut(s) 275
PsuI RGATCY 2 cut(s) 798, 805
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 3 cut(s) 11, 506, 822
RsaNI GTAC 3 cut(s) 10, 505, 821
SapI GCTCTTC 1 cut(s) 893
SaqAI TTAA 2 cut(s) 437, 552
SatI GCNGC 3 cut(s) 228, 288, 417
Sau3AI GATC 5 cut(s) 208, 277, 798, 805, 1081
Sau96I GGNCC 1 cut(s) 591
ScaI AGTACT 1 cut(s) 822
SchI GAGTC 2 cut(s) 512, 853
ScrFI CCNGG 1 cut(s) 595
SfaNI GCATC 2 cut(s) 779, 1055
SfcI CTRYAG 2 cut(s) 174, 225
Sfr274I CTCGAG 1 cut(s) 809
SinI GGWCC 1 cut(s) 591
SlaI CTCGAG 1 cut(s) 809
SmlI CTYRAG 4 cut(s) 297, 436, 551, 809
SmoI CTYRAG 4 cut(s) 297, 436, 551, 809
Sse9I AATT 8 cut(s) 66, 320, 583, 744, 859, 944, 1016, 1051
SsiI CCGC 1 cut(s) 287
SspMI CTAG 2 cut(s) 369, 563
StyD4I CCNGG 1 cut(s) 593
StyI CCWWGG 4 cut(s) 78, 249, 482, 613
TaaI ACNGT 2 cut(s) 504, 575
TaiI ACGT 3 cut(s) 15, 130, 910
TaqI TCGA 1 cut(s) 810
TaqII GACCGA 1 cut(s) 567
TasI AATT 8 cut(s) 66, 320, 583, 744, 859, 944, 1016, 1051
TatI WGTACW 2 cut(s) 504, 820
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 3 cut(s) 458, 644, 669
Tru1I TTAA 2 cut(s) 437, 552
Tru9I TTAA 2 cut(s) 437, 552
TseFI GTSAC 3 cut(s) 515, 569, 690
TseI GCWGC 2 cut(s) 227, 416
Tsp45I GTSAC 3 cut(s) 515, 569, 690
TspDTI ATGAA 1 cut(s) 720
Vha464I CTTAAG 2 cut(s) 436, 551
VpaK11BI GGWCC 1 cut(s) 591
XapI RAATTY 4 cut(s) 66, 583, 744, 1016
XcmI CCANNNNNNNNNTGG 1 cut(s) 85
XhoI CTCGAG 1 cut(s) 809
XspI CTAG 2 cut(s) 369, 563
ZrmI AGTACT 1 cut(s) 822
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.