No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0320291 RchiOBHm_Chr1g0322931 RchiOBHm_Chr1g0343151 RchiOBHm_Chr2g0105391 RchiOBHm_Chr3g0474461 RchiOBHm_Chr3g0481781 RchiOBHm_Chr4g0409751 RchiOBHm_Chr4g0427631 RchiOBHm_Chr4g0442271 RchiOBHm_Chr5g0024691 RchiOBHm_Chr5g0048291 RchiOBHm_Chr5g0052711 RchiOBHm_Chr6g0295221 |
| rosa_roxburghii | Rroxscaffold_2G00079540 Rroxscaffold_6G00388270 |
| rosa_rugosa | Rorug05G0063500 Rorug07G0301300 |
| rosa_samantha | Rh2BG470300 Rh2CG226100 Rh3AG191800 Rh5DG338800 Rh6DG326900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 39 |
| AsuC2I | CCSGG | 1 cut(s) | 130 |
| BcnI | CCSGG | 1 cut(s) | 130 |
| BfmI | CTRYAG | 1 cut(s) | 102 |
| BisI | GCNGC | 1 cut(s) | 40 |
| BlsI | GCNGC | 1 cut(s) | 41 |
| Bme1390I | CCNGG | 1 cut(s) | 130 |
| BmrFI | CCNGG | 1 cut(s) | 130 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 134 |
| BpuMI | CCSGG | 1 cut(s) | 130 |
| BsgI | GTGCAG | 1 cut(s) | 82 |
| BsiSI | CCGG | 1 cut(s) | 130 |
| BslFI | GGGAC | 1 cut(s) | 34 |
| BsmFI | GGGAC | 1 cut(s) | 34 |
| BspACI | CCGC | 1 cut(s) | 39 |
| BspQI | GCTCTTC | 1 cut(s) | 81 |
| Bst6I | CTCTTC | 2 cut(s) | 34, 81 |
| BstSCI | CCNGG | 1 cut(s) | 128 |
| BstSFI | CTRYAG | 1 cut(s) | 102 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 137 |
| CviAII | CATG | 1 cut(s) | 80 |
| Eam1104I | CTCTTC | 2 cut(s) | 34, 81 |
| EarI | CTCTTC | 2 cut(s) | 34, 81 |
| FaeI | CATG | 1 cut(s) | 83 |
| FaiI | YATR | 4 cut(s) | 81, 92, 94, 104 |
| FaqI | GGGAC | 1 cut(s) | 34 |
| FatI | CATG | 1 cut(s) | 79 |
| Fnu4HI | GCNGC | 1 cut(s) | 40 |
| Fsp4HI | GCNGC | 1 cut(s) | 40 |
| GluI | GCNGC | 1 cut(s) | 40 |
| HapII | CCGG | 1 cut(s) | 130 |
| Hin1II | CATG | 1 cut(s) | 83 |
| HpaII | CCGG | 1 cut(s) | 130 |
| HpyCH4IV | ACGT | 1 cut(s) | 34 |
| HpyCH4V | TGCA | 2 cut(s) | 99, 121 |
| HpySE526I | ACGT | 1 cut(s) | 34 |
| Hsp92II | CATG | 1 cut(s) | 83 |
| LguI | GCTCTTC | 1 cut(s) | 81 |
| LmnI | GCTCC | 1 cut(s) | 9 |
| LpnPI | CCDG | 2 cut(s) | 32, 143 |
| MaeII | ACGT | 1 cut(s) | 34 |
| MboII | GAAGA | 2 cut(s) | 21, 68 |
| MfeI | CAATTG | 1 cut(s) | 154 |
| MluCI | AATT | 1 cut(s) | 154 |
| MnlI | CCTC | 3 cut(s) | 26, 37, 126 |
| MspI | CCGG | 1 cut(s) | 130 |
| MspR9I | CCNGG | 1 cut(s) | 130 |
| MunI | CAATTG | 1 cut(s) | 154 |
| NciI | CCSGG | 1 cut(s) | 130 |
| NlaIII | CATG | 1 cut(s) | 83 |
| PciSI | GCTCTTC | 1 cut(s) | 81 |
| PkrI | GCNGC | 1 cut(s) | 41 |
| SapI | GCTCTTC | 1 cut(s) | 81 |
| SatI | GCNGC | 1 cut(s) | 40 |
| ScrFI | CCNGG | 1 cut(s) | 130 |
| SetI | ASST | 1 cut(s) | 37 |
| SfcI | CTRYAG | 1 cut(s) | 102 |
| SgeI | CNNG | 6 cut(s) | 31, 45, 92, 130, 141, 142 |
| Sse9I | AATT | 1 cut(s) | 154 |
| SsiI | CCGC | 1 cut(s) | 39 |
| StyD4I | CCNGG | 1 cut(s) | 128 |
| TaiI | ACGT | 1 cut(s) | 37 |
| TasI | AATT | 1 cut(s) | 154 |
| TauI | GCSGC | 1 cut(s) | 42 |
| TspDTI | ATGAA | 1 cut(s) | 68 |