RchiOBHm_Chr3g0481781

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
27882950 .. 27883765
816 bp
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UTR
Exon/CDS
Intron
PRQ44669

Sequence Viewer

Length: 168 bp
ATGCAGACGGATCCTCCACCTTTGATTCCTATGGAGCACGCTGCGGCTTCTTCTGTCCCCTTTGCTTTCCTTCCCTTTTTTTTGTCTTTATGCAGTGCTTTTTATATTGCCACGATCATGAGTTTGGTTTGTATAAAACATAGAGTTTTAGAGTTCAACTTGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

55

Amino Acids

6.16

Weight (kDa)

5.45

Isoelectric Point (pI)

42.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 44
AclWI GGATC 2 cut(s) 5, 18
AgsI TTSAA 1 cut(s) 157
Alw21I GWGCWC 1 cut(s) 39
AlwI GGATC 2 cut(s) 5, 18
ApeKI GCWGC 1 cut(s) 41
BamHI GGATCC 1 cut(s) 10
Bbv12I GWGCWC 1 cut(s) 39
BbvI GCAGC 1 cut(s) 28
BisI GCNGC 2 cut(s) 42, 45
BlsI GCNGC 2 cut(s) 43, 46
BmiI GGNNCC 1 cut(s) 12
BsaXI ACNNNNNCTCC 1 cut(s) 28
BseXI GCAGC 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 39
BslFI GGGAC 1 cut(s) 41
BsmFI GGGAC 1 cut(s) 41
Bsp1286I GDGCHC 1 cut(s) 39
Bsp143I GATC 2 cut(s) 10, 114
BspACI CCGC 1 cut(s) 44
BspHI TCATGA 1 cut(s) 117
BspLI GGNNCC 1 cut(s) 12
BspPI GGATC 2 cut(s) 5, 18
BssMI GATC 2 cut(s) 10, 114
BstC8I GCNNGC 1 cut(s) 39
BstKTI GATC 2 cut(s) 13, 117
BstMBI GATC 2 cut(s) 10, 114
BstV1I GCAGC 1 cut(s) 28
BstX2I RGATCY 1 cut(s) 10
BstYI RGATCY 1 cut(s) 10
BtsI GCAGTG 1 cut(s) 100
BtsIMutI CAGTG 1 cut(s) 100
Cac8I GCNNGC 1 cut(s) 39
CciI TCATGA 1 cut(s) 117
CviAII CATG 1 cut(s) 118
CviJI RGCY 1 cut(s) 47
CviKI_1 RGCY 1 cut(s) 47
DpnI GATC 2 cut(s) 12, 116
DpnII GATC 2 cut(s) 10, 114
FaeI CATG 1 cut(s) 121
FaiI YATR 6 cut(s) 32, 91, 105, 119, 134, 141
FaqI GGGAC 1 cut(s) 41
FatI CATG 1 cut(s) 117
Fnu4HI GCNGC 2 cut(s) 42, 45
Fsp4HI GCNGC 2 cut(s) 42, 45
GluI GCNGC 2 cut(s) 42, 45
Hin1II CATG 1 cut(s) 121
HinfI GANTC 1 cut(s) 25
Hpy188III TCNNGA 1 cut(s) 118
HpyAV CCTTC 1 cut(s) 80
HpyCH4V TGCA 2 cut(s) 4, 93
Hsp92II CATG 1 cut(s) 121
Kzo9I GATC 2 cut(s) 10, 114
LmnI GCTCC 1 cut(s) 34
Lsp1109I GCAGC 1 cut(s) 28
MalI GATC 2 cut(s) 12, 116
MboI GATC 2 cut(s) 10, 114
MboII GAAGA 1 cut(s) 42
MflI RGATCY 1 cut(s) 10
MhlI GDGCHC 1 cut(s) 39
MnlI CCTC 1 cut(s) 24
MslI CAYNNNNRTG 1 cut(s) 116
NdeII GATC 2 cut(s) 10, 114
NlaIII CATG 1 cut(s) 121
NlaIV GGNNCC 1 cut(s) 12
PagI TCATGA 1 cut(s) 117
PfeI GAWTC 1 cut(s) 25
PkrI GCNGC 2 cut(s) 43, 46
PspN4I GGNNCC 1 cut(s) 12
PsuI RGATCY 1 cut(s) 10
RseI CAYNNNNRTG 1 cut(s) 116
SatI GCNGC 2 cut(s) 42, 45
Sau3AI GATC 2 cut(s) 10, 114
SduI GDGCHC 1 cut(s) 39
SetI ASST 1 cut(s) 22
SgeI CNNG 3 cut(s) 50, 124, 130
SmiMI CAYNNNNRTG 1 cut(s) 116
SsiI CCGC 1 cut(s) 44
TauI GCSGC 1 cut(s) 47
TfiI GAWTC 1 cut(s) 25
TscAI CASTG 1 cut(s) 100
TseI GCWGC 1 cut(s) 41
TspGWI ACGGA 1 cut(s) 23
TspRI CASTG 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.