Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016369

Physical Location & Seq

Genomic Coordinates Forward (+)

53350431 .. 53354750

Gene Structure 4320 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50692

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGATCAACTACAGAGATAAACTCGAACGCAGTGTGTCTCTCATTCCGGCAGCCGCTGCTCTCAGTGCGGAGGATCGTGCTGCTCTTGTTAAAGCTCTGGAGACCTTGGTTGGGCAGCATTCTAACAAATTGGAATCACCTGAGCTGAAGAAGCGCATTGAGGCTTTGACAGAAATACAGCGCCAACTCAAGGACCTGGAAACAAAATTTTTTGAGGAGAGGGCTGCACTGAAAGCTAAACAGAAGCGTTTCCAAGAAGAGGGGCATGACTTTAGGCTTTATACACTGAAAAATAATGAAGTGCTTGCTAAGGAGATCACAGAGCATGATGAAGAGGCTTTCAAGTATCTCAGTGATATCAACTGCTGTAGGATAGGCAGTTCTAATGGATTTAAGATGGAGTTTATCTTTAATCCTAACCCCTACTTTGAAAATTCTGTATTGAAAAAGACATACCACATGACTAATGACAATAAGCCTATATTGGAGAAGGCGATTGGGACGGAGATCAAGTGGTATCCAGGGAAAATCTTTGCTGAGAACTGTCGGAGCTTCTTCAACTTCTTTCAACCTCTCCAGGCGGCAGACGTCCAAAGTCAGATGCACCGGAGTTATGGCATTTTTTCAACAATTCGAGATAAGATCATCCCGCAGTGGCACCAAGTGAATGGGAAAAAGAATTCTCATAATTCATACAACTACGGAGGGCATCAGGAGCCACTGGAAATAATATTTTTAGGAGAGAGAGCTGTGTTGGAAGGAAAATATCAGAAACTTTACGAACCTCTCTACGAAAAGAGATATGAGATTGTTAATGGTATAACTGAAGTTCAAGAAACGAAAAGTGAAACTGCAGTAGACCAAGAAGGAGGTAAAGCCACAGAAGAGAAAGGAGTGCCTTACTTTTGGGTTACTGCAATGAAGAATGATGAAGTACTTGGTCAGAAGGTCACAAAGTCTGATGACGGAGCTCTCAAATATCTCAAAGAGATCAAGTGGTGTAGGATAGACAATTCGAAGGGGTTCAAGCTGGAGTTCTTCTTTGATCCAAATCCATATTTTAAAAACACTGTCCTGACAAAAGCATATCATATGAGTAGTGACAGTCAAATGTTAGAGAAGACAACTGGGACAAACATCAACTGGCATCCTGGCAAAAGCTTGACACCTAGTCTTCTGAAGAAGCCAAGAAAGCGATCAAAGAATGCTGAATTCCTGACCAAACAGCAAAGCTTTTTCAACTTTTTTCACACTCCCGAGTATCCTGGGTTTCCTTGGGATTCATCAACTTATACACATCATGATAATTTCCAAAAAATTGAAGATCAATTCGAAGTTCAGAGGGATCTGGATTATGAAGTTGGTAAAACTATTCGAGACAGGGTCATTCCTCATGCAGTATCACTTTTCACTGGGGAAGCTGTTGAGCGGGGCACTTATTTTGAAGATTTAGATGATGATGATGATTTAAATGATGATGATTATTATTCTGATGATGATGATGAGGAGGGGGAGGCTGTTGAGCAGGACACTAAGTTTAGACTGTTCGATAATGATTATGATGCGGAGGAGGAGGATGAATTTGAGGAAGATCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000150 GO:0000217 GO:0000400 GO:0000724 GO:0000725 GO:0000730 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0033554 GO:0034622 GO:0034641 GO:0042148 GO:0042623 GO:0043170 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0045003 GO:0046483 GO:0050896 GO:0051716 GO:0065003 GO:0065004 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090735 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAP

Protein Analysis

532

Amino Acids

62.08

Weight (kDa)

5.07

Isoelectric Point (pI)

34.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAP	PF00956	89 - 176	4.2e-25	Nucleosome assembly protein (NAP)
NAP	PF00956	239 - 473	4.6e-62	Nucleosome assembly protein (NAP)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0016369)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30051 FvH4_6g30060 FvH4_6g30063
rosa_chinensis	RchiOBHm_Chr2g0136101
rosa_laevigata	RLG00000019503
rosa_multiflora	Rmu_sc0002070.1_g000009 Rmu_sc0002986.1_g000017
rosa_roxburghii	Rroxscaffold_2G00108490
rosa_rugosa	Rorug02G0328000 Rorug02G0328100
rosa_samantha	Rh2AG379800 Rh2BG386600 Rh2CG365800 Rh2DG402700
rosa_wichuraiana	Rw2G030960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	591
AccB1I	GGYRCC	1 cut(s)	657
AccBSI	CCGCTC	1 cut(s)	1429
AccI	GTMKAC	1 cut(s)	858
AciI	CCGC	6 cut(s)	54, 68, 581, 650, 1429, 1565
AclWI	GGATC	4 cut(s)	81, 1040, 1353, 1586
AcsI	RAATTY	5 cut(s)	206, 433, 679, 1211, 1580
AcuI	CTGAAG	3 cut(s)	167, 846, 1199
AcyI	GRCGYC	1 cut(s)	588
AdeI	CACNNNGTG	1 cut(s)	664
AfaI	GTAC	1 cut(s)	936
AfiI	CCNNNNNNNGG	3 cut(s)	111, 190, 259
AhdI	GACNNNNNGTC	1 cut(s)	1170
AjnI	CCWGG	5 cut(s)	195, 520, 576, 1150, 1264
AloI	GAACNNNNNNTCC	2 cut(s)	364, 396
Alw21I	GWGCWC	1 cut(s)	973
Alw26I	GTCTC	3 cut(s)	42, 95, 1371
AlwI	GGATC	4 cut(s)	81, 1040, 1353, 1586
AlwNI	CAGNNNCTG	1 cut(s)	56
Ama87I	CYCGRG	1 cut(s)	1256
ApeKI	GCWGC	5 cut(s)	50, 56, 80, 115, 224
ApoI	RAATTY	5 cut(s)	206, 433, 679, 1211, 1580
Asp700I	GAANNNNTTC	2 cut(s)	248, 1022
AspLEI	GCGC	2 cut(s)	156, 183
AspS9I	GGNCC	1 cut(s)	193
AsuHPI	GGTGA	1 cut(s)	129
AsuII	TTCGAA	2 cut(s)	1016, 1332
AvaI	CYCGRG	1 cut(s)	1256
AvaII	GGWCC	1 cut(s)	193
BaeGI	GKGCMC	1 cut(s)	1436
BanI	GGYRCC	1 cut(s)	657
BanII	GRGCYC	1 cut(s)	973
BbsI	GAAGAC	2 cut(s)	1127, 1166
Bbv12I	GWGCWC	1 cut(s)	973
BbvI	GCAGC	5 cut(s)	43, 62, 67, 127, 211
BccI	CCATC	1 cut(s)	391
BciT130I	CCWGG	5 cut(s)	197, 522, 578, 1152, 1266
BciVI	GTATCC	2 cut(s)	528, 1272
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	3 cut(s)	42, 95, 1371
BfaI	CTAG	1 cut(s)	1170
BfmI	CTRYAG	3 cut(s)	10, 367, 852
BfoI	RGCGCY	1 cut(s)	184
BfuI	GTATCC	2 cut(s)	528, 1272
BisI	GCNGC	7 cut(s)	51, 54, 57, 81, 116, 225, 582
BlsI	GCNGC	7 cut(s)	52, 55, 58, 82, 117, 226, 583
BmcAI	AGTACT	1 cut(s)	936
Bme1390I	CCNGG	5 cut(s)	197, 522, 578, 1152, 1266
Bme18I	GGWCC	1 cut(s)	193
BmeRI	GACNNNNNGTC	1 cut(s)	1170
BmeT110I	CYCGRG	1 cut(s)	1256
BmgT120I	GGNCC	1 cut(s)	193
BmiI	GGNNCC	2 cut(s)	659, 717
BmrFI	CCNGG	5 cut(s)	197, 522, 578, 1152, 1266
BmrI	ACTGGG	2 cut(s)	1137, 1422
BmsI	GCATC	4 cut(s)	591, 718, 1156, 1552
BmuI	ACTGGG	2 cut(s)	1137, 1422
BpiI	GAAGAC	2 cut(s)	1127, 1166
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	3 cut(s)	119, 560, 1052
Bpu10I	CCTNAGC	2 cut(s)	141, 309
Bpu14I	TTCGAA	2 cut(s)	1016, 1332
BpuEI	CTTGAG	1 cut(s)	173
BsaBI	GATNNNNATC	1 cut(s)	1050
BsaHI	GRCGYC	1 cut(s)	588
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	4 cut(s)	105, 521, 1265, 1274
BsaWI	WCCGGW	1 cut(s)	606
BsaXI	ACNNNNNCTCC	2 cut(s)	497, 527
Bsc4I	CCNNNNNNNGG	3 cut(s)	111, 190, 259
Bse1I	ACTGG	4 cut(s)	726, 1132, 1148, 1417
Bse3DI	GCAATG	1 cut(s)	924
Bse8I	GATNNNNATC	1 cut(s)	1050
BseBI	CCWGG	5 cut(s)	197, 522, 578, 1152, 1266
BseDI	CCNNGG	4 cut(s)	105, 521, 1265, 1274
BseGI	GGATG	3 cut(s)	645, 1147, 1582
BseJI	GATNNNNATC	1 cut(s)	1050
BseLI	CCNNNNNNNGG	3 cut(s)	111, 190, 259
BseMI	GCAATG	1 cut(s)	924
BseMII	CTCAG	4 cut(s)	76, 132, 364, 528
BseNI	ACTGG	4 cut(s)	726, 1132, 1148, 1417
BseRI	GAGGAG	4 cut(s)	230, 1520, 1583, 1586
BseSI	GKGCMC	1 cut(s)	1436
BseXI	GCAGC	5 cut(s)	43, 62, 67, 127, 211
BsgI	GTGCAG	1 cut(s)	210
BshNI	GGYRCC	1 cut(s)	657
BsiHKAI	GWGCWC	1 cut(s)	973
BsiHKCI	CYCGRG	1 cut(s)	1256
BsiSI	CCGG	2 cut(s)	47, 607
BslFI	GGGAC	2 cut(s)	514, 1144
BslI	CCNNNNNNNGG	3 cut(s)	111, 190, 259
BsmAI	GTCTC	3 cut(s)	42, 95, 1371
BsmFI	GGGAC	2 cut(s)	514, 1144
BsmI	GAATGC	2 cut(s)	118, 1210
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	1 cut(s)	1256
Bsp119I	TTCGAA	2 cut(s)	1016, 1332
Bsp1286I	GDGCHC	2 cut(s)	973, 1436
BspACI	CCGC	6 cut(s)	54, 68, 581, 650, 1429, 1565
BspCNI	CTCAG	4 cut(s)	75, 133, 363, 529
BspHI	TCATGA	1 cut(s)	1300
BspLI	GGNNCC	2 cut(s)	659, 717
BspMAI	CTGCAG	1 cut(s)	856
BspPI	GGATC	4 cut(s)	81, 1040, 1353, 1586
BspT104I	TTCGAA	2 cut(s)	1016, 1332
BspT107I	GGYRCC	1 cut(s)	657
BspTNI	GGTCTC	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	1429
BsrDI	GCAATG	1 cut(s)	924
BsrI	ACTGG	4 cut(s)	726, 1132, 1148, 1417
BssECI	CCNNGG	4 cut(s)	105, 521, 1265, 1274
BssNI	GRCGYC	1 cut(s)	588
BssT1I	CCWWGG	2 cut(s)	105, 1274
Bst2UI	CCWGG	5 cut(s)	197, 522, 578, 1152, 1266
Bst4CI	ACNGT	4 cut(s)	545, 1072, 1106, 1545
Bst6I	CTCTTC	3 cut(s)	252, 327, 879
BstACI	GRCGYC	1 cut(s)	588
BstAPI	GCANNNNNTGC	1 cut(s)	56
BstBI	TTCGAA	2 cut(s)	1016, 1332
BstC8I	GCNNGC	1 cut(s)	306
BstDEI	CTNAG	6 cut(s)	62, 141, 309, 350, 537, 1533
BstF5I	GGATG	3 cut(s)	645, 1147, 1582
BstH2I	RGCGCY	1 cut(s)	184
BstHHI	GCGC	2 cut(s)	156, 183
BstMAI	GTCTC	3 cut(s)	42, 95, 1371
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 65, 151, 233, 715, 1192
BstNI	CCWGG	5 cut(s)	197, 522, 578, 1152, 1266
BstSCI	CCNGG	5 cut(s)	195, 520, 576, 1150, 1264
BstSFI	CTRYAG	3 cut(s)	10, 367, 852
BstSLI	GKGCMC	1 cut(s)	1436
BstV1I	GCAGC	5 cut(s)	43, 62, 67, 127, 211
BstV2I	GAAGAC	2 cut(s)	1127, 1166
BstX2I	RGATCY	2 cut(s)	1345, 1591
BstXI	CCANNNNNNTGG	1 cut(s)	668
BstYI	RGATCY	2 cut(s)	1345, 1591
BsuI	GTATCC	2 cut(s)	528, 1272
BtsCI	GGATG	3 cut(s)	645, 1147, 1582
BtsI	GCAGTG	2 cut(s)	37, 659
BtsIMutI	CAGTG	9 cut(s)	37, 70, 227, 284, 358, 659, 719, 1068, 1410
Cac8I	GCNNGC	1 cut(s)	306
CaiI	CAGNNNCTG	1 cut(s)	56
CciI	TCATGA	1 cut(s)	1300
CfoI	GCGC	2 cut(s)	156, 183
Cfr13I	GGNCC	1 cut(s)	193
Csp6I	GTAC	1 cut(s)	935
CviAII	CATG	5 cut(s)	266, 326, 460, 1301, 1394
CviQI	GTAC	1 cut(s)	935
DdeI	CTNAG	6 cut(s)	62, 141, 309, 350, 537, 1533
DraI	TTTAAA	2 cut(s)	1063, 1470
DraIII	CACNNNGTG	1 cut(s)	664
DriI	GACNNNNNGTC	1 cut(s)	1170
Eam1104I	CTCTTC	3 cut(s)	252, 327, 879
Eam1105I	GACNNNNNGTC	1 cut(s)	1170
EarI	CTCTTC	3 cut(s)	252, 327, 879
Ecl136II	GAGCTC	1 cut(s)	971
Eco130I	CCWWGG	2 cut(s)	105, 1274
Eco24I	GRGCYC	1 cut(s)	973
Eco31I	GGTCTC	1 cut(s)	95
Eco32I	GATATC	1 cut(s)	358
Eco47I	GGWCC	1 cut(s)	193
Eco53kI	GAGCTC	1 cut(s)	971
Eco57I	CTGAAG	3 cut(s)	167, 846, 1199
Eco88I	CYCGRG	1 cut(s)	1256
EcoICRI	GAGCTC	1 cut(s)	971
EcoO109I	RGGNCCY	1 cut(s)	193
EcoRI	GAATTC	2 cut(s)	679, 1211
EcoRII	CCWGG	5 cut(s)	195, 520, 576, 1150, 1264
EcoRV	GATATC	1 cut(s)	358
EcoT14I	CCWWGG	2 cut(s)	105, 1274
EcoT38I	GRGCYC	1 cut(s)	973
ErhI	CCWWGG	2 cut(s)	105, 1274
FaeI	CATG	5 cut(s)	269, 329, 463, 1304, 1397
FaqI	GGGAC	2 cut(s)	514, 1144
FatI	CATG	5 cut(s)	265, 325, 459, 1300, 1393
FauI	CCCGC	2 cut(s)	657, 1422
FauNDI	CATATG	1 cut(s)	1092
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	858
Fnu4HI	GCNGC	7 cut(s)	51, 54, 57, 81, 116, 225, 582
FokI	GGATG	3 cut(s)	632, 1134, 1589
FriOI	GRGCYC	1 cut(s)	973
Fsp4HI	GCNGC	7 cut(s)	51, 54, 57, 81, 116, 225, 582
FspBI	CTAG	1 cut(s)	1170
GlaI	GCGC	2 cut(s)	155, 182
GluI	GCNGC	7 cut(s)	51, 54, 57, 81, 116, 225, 582
GsuI	CTGGAG	3 cut(s)	119, 560, 1052
HaeII	RGCGCY	1 cut(s)	184
HapII	CCGG	2 cut(s)	47, 607
HhaI	GCGC	2 cut(s)	156, 183
Hin1I	GRCGYC	1 cut(s)	588
Hin1II	CATG	5 cut(s)	269, 329, 463, 1304, 1397
Hin6I	GCGC	2 cut(s)	154, 181
HinP1I	GCGC	2 cut(s)	154, 181
HindIII	AAGCTT	2 cut(s)	1159, 1231
HinfI	GANTC	2 cut(s)	134, 1280
HpaII	CCGG	2 cut(s)	47, 607
HphI	GGTGA	1 cut(s)	129
Hpy166II	GTNNAC	1 cut(s)	859
Hpy188I	TCNGA	8 cut(s)	549, 600, 771, 945, 961, 1179, 1341, 1492
Hpy8I	GTNNAC	1 cut(s)	859
HpyAV	CCTTC	5 cut(s)	484, 752, 860, 940, 1012
HpyCH4III	ACNGT	4 cut(s)	545, 1072, 1106, 1545
HpyCH4IV	ACGT	1 cut(s)	588
HpyCH4V	TGCA	5 cut(s)	227, 604, 854, 917, 1397
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 65, 151, 233, 715, 1192
HpyF3I	CTNAG	6 cut(s)	62, 141, 309, 350, 537, 1533
HpySE526I	ACGT	1 cut(s)	588
Hsp92I	GRCGYC	1 cut(s)	588
Hsp92II	CATG	5 cut(s)	269, 329, 463, 1304, 1397
HspAI	GCGC	2 cut(s)	154, 181
Ksp22I	TGATCA	1 cut(s)	3
LmnI	GCTCC	3 cut(s)	549, 715, 968
Lsp1109I	GCAGC	5 cut(s)	43, 62, 67, 127, 211
LweI	GCATC	4 cut(s)	591, 718, 1156, 1552
MaeI	CTAG	1 cut(s)	1170
MaeII	ACGT	1 cut(s)	588
MaeIII	GTNAC	3 cut(s)	910, 949, 1100
MbiI	CCGCTC	1 cut(s)	1429
MflI	RGATCY	2 cut(s)	1345, 1591
MhlI	GDGCHC	2 cut(s)	973, 1436
MmeI	TCCRAC	2 cut(s)	527, 735
MroXI	GAANNNNTTC	2 cut(s)	248, 1022
MseI	TTAA	6 cut(s)	90, 393, 411, 813, 1062, 1469
MspA1I	CMGCKG	1 cut(s)	56
MspI	CCGG	2 cut(s)	47, 607
MspR9I	CCNGG	5 cut(s)	197, 522, 578, 1152, 1266
Mva1269I	GAATGC	2 cut(s)	118, 1210
MvaI	CCWGG	5 cut(s)	197, 522, 578, 1152, 1266
MwoI	GCNNNNNNNGC	6 cut(s)	56, 65, 151, 233, 715, 1192
NdeI	CATATG	1 cut(s)	1092
NlaIII	CATG	5 cut(s)	269, 329, 463, 1304, 1397
NlaIV	GGNNCC	2 cut(s)	659, 717
NmuCI	GTSAC	2 cut(s)	949, 1100
NspV	TTCGAA	2 cut(s)	1016, 1332
PagI	TCATGA	1 cut(s)	1300
PctI	GAATGC	2 cut(s)	118, 1210
PdmI	GAANNNNTTC	2 cut(s)	248, 1022
PfeI	GAWTC	2 cut(s)	134, 1280
PflFI	GACNNNGTC	1 cut(s)	1382
PkrI	GCNGC	7 cut(s)	52, 55, 58, 82, 117, 226, 583
PpuMI	RGGWCCY	1 cut(s)	193
Psp124BI	GAGCTC	1 cut(s)	973
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	5 cut(s)	195, 520, 576, 1150, 1264
PspGI	CCWGG	5 cut(s)	195, 520, 576, 1150, 1264
PspN4I	GGNNCC	2 cut(s)	659, 717
PspPI	GGNCC	1 cut(s)	193
PspPPI	RGGWCCY	1 cut(s)	193
PstI	CTGCAG	1 cut(s)	856
PstNI	CAGNNNCTG	1 cut(s)	56
PsuI	RGATCY	2 cut(s)	1345, 1591
PsyI	GACNNNGTC	1 cut(s)	1382
RsaI	GTAC	1 cut(s)	936
RsaNI	GTAC	1 cut(s)	935
SacI	GAGCTC	1 cut(s)	973
SaqAI	TTAA	6 cut(s)	90, 393, 411, 813, 1062, 1469
SatI	GCNGC	7 cut(s)	51, 54, 57, 81, 116, 225, 582
Sau96I	GGNCC	1 cut(s)	193
ScaI	AGTACT	1 cut(s)	936
ScrFI	CCNGG	5 cut(s)	197, 522, 578, 1152, 1266
SduI	GDGCHC	2 cut(s)	973, 1436
SfaNI	GCATC	4 cut(s)	591, 718, 1156, 1552
SfcI	CTRYAG	3 cut(s)	10, 367, 852
SfuI	TTCGAA	2 cut(s)	1016, 1332
SinI	GGWCC	1 cut(s)	193
SmiI	ATTTAAAT	1 cut(s)	1470
SmlI	CTYRAG	1 cut(s)	188
SmoI	CTYRAG	1 cut(s)	188
SsiI	CCGC	6 cut(s)	54, 68, 581, 650, 1429, 1565
SspI	AATATT	1 cut(s)	732
SspMI	CTAG	1 cut(s)	1170
SstI	GAGCTC	1 cut(s)	973
StyD4I	CCNGG	5 cut(s)	195, 520, 576, 1150, 1264
StyI	CCWWGG	2 cut(s)	105, 1274
SwaI	ATTTAAAT	1 cut(s)	1470
TaaI	ACNGT	4 cut(s)	545, 1072, 1106, 1545
TaiI	ACGT	1 cut(s)	591
TaqI	TCGA	6 cut(s)	24, 634, 1016, 1332, 1375, 1548
TatI	WGTACW	1 cut(s)	934
TauI	GCSGC	2 cut(s)	56, 584
TfiI	GAWTC	2 cut(s)	134, 1280
Tru1I	TTAA	6 cut(s)	90, 393, 411, 813, 1062, 1469
Tru9I	TTAA	6 cut(s)	90, 393, 411, 813, 1062, 1469
TscAI	CASTG	9 cut(s)	37, 70, 234, 291, 358, 659, 726, 1075, 1417
TseFI	GTSAC	2 cut(s)	949, 1100
TseI	GCWGC	5 cut(s)	50, 56, 80, 115, 224
Tsp45I	GTSAC	2 cut(s)	949, 1100
TspDTI	ATGAA	8 cut(s)	312, 345, 681, 935, 945, 1272, 1371, 1593
TspGWI	ACGGA	3 cut(s)	518, 717, 981
TspRI	CASTG	9 cut(s)	37, 70, 234, 291, 358, 659, 726, 1075, 1417
Tth111I	GACNNNGTC	1 cut(s)	1382
VpaK11BI	GGWCC	1 cut(s)	193
XapI	RAATTY	5 cut(s)	206, 433, 679, 1211, 1580
XmiI	GTMKAC	1 cut(s)	858
XmnI	GAANNNNTTC	2 cut(s)	248, 1022
XspI	CTAG	1 cut(s)	1170
ZraI	GACGTC	1 cut(s)	589
ZrmI	AGTACT	1 cut(s)	936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.