Nucleosome assembly protein (NAP)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g30051 FvH4_6g30060 FvH4_6g30063 |
| rosa_chinensis | RchiOBHm_Chr2g0136101 |
| rosa_laevigata | RLG00000019503 |
| rosa_multiflora | Rmu_sc0002070.1_g000009 Rmu_sc0002986.1_g000017 |
| rosa_roxburghii | Rroxscaffold_2G00108490 |
| rosa_rugosa | Rorug02G0328000 Rorug02G0328100 |
| rosa_samantha | Rh2AG379800 Rh2BG386600 Rh2CG365800 Rh2DG402700 |
| rosa_wichuraiana | Rw2G030960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 990 |
| AccB1I | GGYRCC | 2 cut(s) | 380, 1056 |
| AccBSI | CCGCTC | 1 cut(s) | 1828 |
| AccI | GTMKAC | 1 cut(s) | 1257 |
| AccII | CGCG | 3 cut(s) | 234, 298, 378 |
| AclWI | GGATC | 5 cut(s) | 233, 480, 1439, 1752, 1985 |
| AcsI | RAATTY | 5 cut(s) | 605, 832, 1078, 1610, 1979 |
| AcuI | CTGAAG | 3 cut(s) | 566, 1245, 1598 |
| AcyI | GRCGYC | 4 cut(s) | 61, 173, 190, 987 |
| AdeI | CACNNNGTG | 1 cut(s) | 1063 |
| AfaI | GTAC | 2 cut(s) | 252, 1335 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 510, 589, 658 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1569 |
| AjnI | CCWGG | 6 cut(s) | 415, 594, 919, 975, 1549, 1663 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 763, 795 |
| Alw21I | GWGCWC | 1 cut(s) | 1372 |
| Alw26I | GTCTC | 5 cut(s) | 68, 170, 197, 494, 1770 |
| AlwI | GGATC | 5 cut(s) | 233, 480, 1439, 1752, 1985 |
| Ama87I | CYCGRG | 2 cut(s) | 539, 1655 |
| AoxI | GGCC | 1 cut(s) | 158 |
| ApeKI | GCWGC | 7 cut(s) | 264, 267, 270, 316, 479, 514, 623 |
| ApoI | RAATTY | 5 cut(s) | 605, 832, 1078, 1610, 1979 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 647, 1421 |
| AspLEI | GCGC | 7 cut(s) | 122, 236, 275, 298, 378, 555, 582 |
| AspS9I | GGNCC | 2 cut(s) | 5, 592 |
| AsuC2I | CCSGG | 1 cut(s) | 187 |
| AsuHPI | GGTGA | 1 cut(s) | 528 |
| AsuII | TTCGAA | 2 cut(s) | 1415, 1731 |
| AvaI | CYCGRG | 2 cut(s) | 539, 1655 |
| AvaII | GGWCC | 2 cut(s) | 5, 592 |
| BaeGI | GKGCMC | 1 cut(s) | 1835 |
| BanI | GGYRCC | 2 cut(s) | 380, 1056 |
| BanII | GRGCYC | 1 cut(s) | 1372 |
| BbsI | GAAGAC | 2 cut(s) | 1526, 1565 |
| Bbv12I | GWGCWC | 1 cut(s) | 1372 |
| BbvI | GCAGC | 7 cut(s) | 276, 279, 282, 328, 466, 526, 610 |
| BccI | CCATC | 1 cut(s) | 790 |
| BceAI | ACGGC | 1 cut(s) | 44 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 204, 238 |
| BciT130I | CCWGG | 6 cut(s) | 417, 596, 921, 977, 1551, 1665 |
| BciVI | GTATCC | 2 cut(s) | 927, 1671 |
| BcnI | CCSGG | 1 cut(s) | 187 |
| BcoDI | GTCTC | 5 cut(s) | 68, 170, 197, 494, 1770 |
| BfaI | CTAG | 3 cut(s) | 45, 212, 1569 |
| BfmI | CTRYAG | 4 cut(s) | 246, 262, 766, 1251 |
| BfoI | RGCGCY | 3 cut(s) | 123, 276, 583 |
| BfuI | GTATCC | 2 cut(s) | 927, 1671 |
| BmcAI | AGTACT | 1 cut(s) | 1335 |
| Bme1390I | CCNGG | 7 cut(s) | 187, 417, 596, 921, 977, 1551, 1665 |
| Bme18I | GGWCC | 2 cut(s) | 5, 592 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1569 |
| BmeT110I | CYCGRG | 2 cut(s) | 539, 1655 |
| BmgT120I | GGNCC | 2 cut(s) | 5, 592 |
| BmiI | GGNNCC | 5 cut(s) | 6, 382, 440, 1058, 1116 |
| BmrFI | CCNGG | 7 cut(s) | 187, 417, 596, 921, 977, 1551, 1665 |
| BmrI | ACTGGG | 4 cut(s) | 214, 427, 1536, 1821 |
| BmsI | GCATC | 6 cut(s) | 40, 990, 1117, 1318, 1555, 1951 |
| BmuI | ACTGGG | 4 cut(s) | 214, 427, 1536, 1821 |
| BoxI | GACNNNNGTC | 1 cut(s) | 60 |
| BpiI | GAAGAC | 2 cut(s) | 1526, 1565 |
| BpmI | CTGGAG | 6 cut(s) | 50, 67, 179, 518, 959, 1451 |
| Bpu10I | CCTNAGC | 1 cut(s) | 708 |
| Bpu14I | TTCGAA | 2 cut(s) | 1415, 1731 |
| BpuEI | CTTGAG | 1 cut(s) | 572 |
| BpuMI | CCSGG | 1 cut(s) | 187 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1449 |
| BsaHI | GRCGYC | 4 cut(s) | 61, 173, 190, 987 |
| BsaI | GGTCTC | 1 cut(s) | 494 |
| BsaJI | CCNNGG | 6 cut(s) | 26, 415, 504, 920, 1664, 1673 |
| BsaWI | WCCGGW | 1 cut(s) | 1005 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 896, 926 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 510, 589, 658 |
| Bse118I | RCCGGY | 4 cut(s) | 57, 116, 156, 292 |
| Bse1I | ACTGG | 8 cut(s) | 67, 84, 220, 433, 1125, 1531, 1547, 1816 |
| Bse3DI | GCAATG | 1 cut(s) | 1323 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1449 |
| BseBI | CCWGG | 6 cut(s) | 417, 596, 921, 977, 1551, 1665 |
| BseDI | CCNNGG | 6 cut(s) | 26, 415, 504, 920, 1664, 1673 |
| BseGI | GGATG | 5 cut(s) | 138, 253, 1044, 1546, 1981 |
| BseJI | GATNNNNATC | 1 cut(s) | 1449 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 510, 589, 658 |
| BseMI | GCAATG | 1 cut(s) | 1323 |
| BseMII | CTCAG | 4 cut(s) | 401, 475, 763, 927 |
| BseNI | ACTGG | 8 cut(s) | 67, 84, 220, 433, 1125, 1531, 1547, 1816 |
| BseRI | GAGGAG | 4 cut(s) | 629, 1919, 1982, 1985 |
| BseSI | GKGCMC | 1 cut(s) | 1835 |
| BseXI | GCAGC | 7 cut(s) | 276, 279, 282, 328, 466, 526, 610 |
| BsgI | GTGCAG | 1 cut(s) | 609 |
| Bsh1236I | CGCG | 3 cut(s) | 234, 298, 378 |
| BshFI | GGCC | 1 cut(s) | 160 |
| BshNI | GGYRCC | 2 cut(s) | 380, 1056 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1372 |
| BsiHKCI | CYCGRG | 2 cut(s) | 539, 1655 |
| BsiSI | CCGG | 6 cut(s) | 58, 117, 157, 187, 293, 1006 |
| BslFI | GGGAC | 3 cut(s) | 414, 913, 1543 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 510, 589, 658 |
| BsmAI | GTCTC | 5 cut(s) | 68, 170, 197, 494, 1770 |
| BsmBI | CGTCTC | 3 cut(s) | 68, 170, 197 |
| BsmFI | GGGAC | 3 cut(s) | 414, 913, 1543 |
| BsmI | GAATGC | 1 cut(s) | 1609 |
| BsnI | GGCC | 1 cut(s) | 160 |
| Bso31I | GGTCTC | 1 cut(s) | 494 |
| BsoBI | CYCGRG | 2 cut(s) | 539, 1655 |
| Bsp119I | TTCGAA | 2 cut(s) | 1415, 1731 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1372, 1835 |
| BspANI | GGCC | 1 cut(s) | 160 |
| BspCNI | CTCAG | 4 cut(s) | 400, 474, 762, 928 |
| BspFNI | CGCG | 3 cut(s) | 234, 298, 378 |
| BspHI | TCATGA | 1 cut(s) | 1699 |
| BspLI | GGNNCC | 5 cut(s) | 6, 382, 440, 1058, 1116 |
| BspMAI | CTGCAG | 3 cut(s) | 250, 266, 1255 |
| BspPI | GGATC | 5 cut(s) | 233, 480, 1439, 1752, 1985 |
| BspT104I | TTCGAA | 2 cut(s) | 1415, 1731 |
| BspT107I | GGYRCC | 2 cut(s) | 380, 1056 |
| BspTNI | GGTCTC | 1 cut(s) | 494 |
| BsrBI | CCGCTC | 1 cut(s) | 1828 |
| BsrDI | GCAATG | 1 cut(s) | 1323 |
| BsrFI | RCCGGY | 4 cut(s) | 57, 116, 156, 292 |
| BsrI | ACTGG | 8 cut(s) | 67, 84, 220, 433, 1125, 1531, 1547, 1816 |
| BssAI | RCCGGY | 4 cut(s) | 57, 116, 156, 292 |
| BssECI | CCNNGG | 6 cut(s) | 26, 415, 504, 920, 1664, 1673 |
| BssNI | GRCGYC | 4 cut(s) | 61, 173, 190, 987 |
| BssT1I | CCWWGG | 2 cut(s) | 504, 1673 |
| Bst2UI | CCWGG | 6 cut(s) | 417, 596, 921, 977, 1551, 1665 |
| Bst4CI | ACNGT | 5 cut(s) | 131, 309, 944, 1471, 1505 |
| Bst6I | CTCTTC | 3 cut(s) | 651, 726, 1278 |
| BstACI | GRCGYC | 4 cut(s) | 61, 173, 190, 987 |
| BstBI | TTCGAA | 2 cut(s) | 1415, 1731 |
| BstC8I | GCNNGC | 6 cut(s) | 118, 201, 246, 262, 294, 705 |
| BstDEI | CTNAG | 6 cut(s) | 387, 461, 708, 749, 936, 1932 |
| BstDSI | CCRYGG | 1 cut(s) | 26 |
| BstF5I | GGATG | 5 cut(s) | 138, 253, 1044, 1546, 1981 |
| BstFNI | CGCG | 3 cut(s) | 234, 298, 378 |
| BstH2I | RGCGCY | 3 cut(s) | 123, 276, 583 |
| BstHHI | GCGC | 7 cut(s) | 122, 236, 275, 298, 378, 555, 582 |
| BstMAI | GTCTC | 5 cut(s) | 68, 170, 197, 494, 1770 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 119, 196, 270, 281, 464, 550, 632, 1114, 1591 |
| BstNI | CCWGG | 6 cut(s) | 417, 596, 921, 977, 1551, 1665 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 60 |
| BstSCI | CCNGG | 7 cut(s) | 185, 415, 594, 919, 975, 1549, 1663 |
| BstSFI | CTRYAG | 4 cut(s) | 246, 262, 766, 1251 |
| BstSLI | GKGCMC | 1 cut(s) | 1835 |
| BstUI | CGCG | 3 cut(s) | 234, 298, 378 |
| BstV1I | GCAGC | 7 cut(s) | 276, 279, 282, 328, 466, 526, 610 |
| BstV2I | GAAGAC | 2 cut(s) | 1526, 1565 |
| BstX2I | RGATCY | 3 cut(s) | 238, 1744, 1990 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1067 |
| BstYI | RGATCY | 3 cut(s) | 238, 1744, 1990 |
| BsuI | GTATCC | 2 cut(s) | 927, 1671 |
| BsuRI | GGCC | 1 cut(s) | 160 |
| BtgI | CCRYGG | 1 cut(s) | 26 |
| BtsCI | GGATG | 5 cut(s) | 138, 253, 1044, 1546, 1981 |
| BtsI | GCAGTG | 1 cut(s) | 1058 |
| Cac8I | GCNNGC | 6 cut(s) | 118, 201, 246, 262, 294, 705 |
| CciI | TCATGA | 1 cut(s) | 1699 |
| CfoI | GCGC | 7 cut(s) | 122, 236, 275, 298, 378, 555, 582 |
| Cfr10I | RCCGGY | 4 cut(s) | 57, 116, 156, 292 |
| Cfr13I | GGNCC | 2 cut(s) | 5, 592 |
| CseI | GACGC | 4 cut(s) | 50, 162, 179, 374 |
| Csp6I | GTAC | 2 cut(s) | 251, 1334 |
| CviAII | CATG | 5 cut(s) | 665, 725, 859, 1700, 1793 |
| CviQI | GTAC | 2 cut(s) | 251, 1334 |
| DdeI | CTNAG | 6 cut(s) | 387, 461, 708, 749, 936, 1932 |
| DraI | TTTAAA | 2 cut(s) | 1462, 1869 |
| DraIII | CACNNNGTG | 1 cut(s) | 1063 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1569 |
| Eam1104I | CTCTTC | 3 cut(s) | 651, 726, 1278 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1569 |
| EarI | CTCTTC | 3 cut(s) | 651, 726, 1278 |
| EciI | GGCGGA | 2 cut(s) | 30, 231 |
| Ecl136II | GAGCTC | 1 cut(s) | 1370 |
| Eco130I | CCWWGG | 2 cut(s) | 504, 1673 |
| Eco24I | GRGCYC | 1 cut(s) | 1372 |
| Eco31I | GGTCTC | 1 cut(s) | 494 |
| Eco32I | GATATC | 1 cut(s) | 757 |
| Eco47I | GGWCC | 2 cut(s) | 5, 592 |
| Eco53kI | GAGCTC | 1 cut(s) | 1370 |
| Eco57I | CTGAAG | 3 cut(s) | 566, 1245, 1598 |
| Eco88I | CYCGRG | 2 cut(s) | 539, 1655 |
| EcoICRI | GAGCTC | 1 cut(s) | 1370 |
| EcoO109I | RGGNCCY | 2 cut(s) | 5, 592 |
| EcoRI | GAATTC | 2 cut(s) | 1078, 1610 |
| EcoRII | CCWGG | 6 cut(s) | 415, 594, 919, 975, 1549, 1663 |
| EcoRV | GATATC | 1 cut(s) | 757 |
| EcoT14I | CCWWGG | 2 cut(s) | 504, 1673 |
| EcoT38I | GRGCYC | 1 cut(s) | 1372 |
| ErhI | CCWWGG | 2 cut(s) | 504, 1673 |
| Esp3I | CGTCTC | 3 cut(s) | 68, 170, 197 |
| FaeI | CATG | 5 cut(s) | 668, 728, 862, 1703, 1796 |
| FaqI | GGGAC | 3 cut(s) | 414, 913, 1543 |
| FatI | CATG | 5 cut(s) | 664, 724, 858, 1699, 1792 |
| FauI | CCCGC | 3 cut(s) | 265, 1056, 1821 |
| FauNDI | CATATG | 1 cut(s) | 1491 |
| FblI | GTMKAC | 1 cut(s) | 1257 |
| FokI | GGATG | 5 cut(s) | 125, 240, 1031, 1533, 1988 |
| FriOI | GRGCYC | 1 cut(s) | 1372 |
| FspBI | CTAG | 3 cut(s) | 45, 212, 1569 |
| GlaI | GCGC | 7 cut(s) | 121, 235, 274, 297, 377, 554, 581 |
| GsuI | CTGGAG | 6 cut(s) | 50, 67, 179, 518, 959, 1451 |
| HaeII | RGCGCY | 3 cut(s) | 123, 276, 583 |
| HaeIII | GGCC | 1 cut(s) | 160 |
| HapII | CCGG | 6 cut(s) | 58, 117, 157, 187, 293, 1006 |
| HgaI | GACGC | 4 cut(s) | 50, 162, 179, 374 |
| HhaI | GCGC | 7 cut(s) | 122, 236, 275, 298, 378, 555, 582 |
| Hin1I | GRCGYC | 4 cut(s) | 61, 173, 190, 987 |
| Hin1II | CATG | 5 cut(s) | 668, 728, 862, 1703, 1796 |
| Hin6I | GCGC | 7 cut(s) | 120, 234, 273, 296, 376, 553, 580 |
| HinP1I | GCGC | 7 cut(s) | 120, 234, 273, 296, 376, 553, 580 |
| HindIII | AAGCTT | 2 cut(s) | 1558, 1630 |
| HinfI | GANTC | 3 cut(s) | 533, 789, 1679 |
| HpaII | CCGG | 6 cut(s) | 58, 117, 157, 187, 293, 1006 |
| HphI | GGTGA | 1 cut(s) | 528 |
| Hpy166II | GTNNAC | 1 cut(s) | 1258 |
| Hpy8I | GTNNAC | 1 cut(s) | 1258 |
| Hpy99I | CGWCG | 2 cut(s) | 178, 368 |
| HpyAV | CCTTC | 8 cut(s) | 18, 289, 352, 883, 1151, 1259, 1339, 1411 |
| HpyCH4III | ACNGT | 5 cut(s) | 131, 309, 944, 1471, 1505 |
| HpyCH4IV | ACGT | 1 cut(s) | 987 |
| HpyCH4V | TGCA | 8 cut(s) | 248, 264, 626, 1003, 1253, 1316, 1331, 1796 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 119, 196, 270, 281, 464, 550, 632, 1114, 1591 |
| HpyF3I | CTNAG | 6 cut(s) | 387, 461, 708, 749, 936, 1932 |
| HpySE526I | ACGT | 1 cut(s) | 987 |
| Hsp92I | GRCGYC | 4 cut(s) | 61, 173, 190, 987 |
| Hsp92II | CATG | 5 cut(s) | 668, 728, 862, 1703, 1796 |
| HspAI | GCGC | 7 cut(s) | 120, 234, 273, 296, 376, 553, 580 |
| KroI | GCCGGC | 2 cut(s) | 116, 292 |
| KroNI | GCCGGC | 2 cut(s) | 118, 294 |
| LmnI | GCTCC | 4 cut(s) | 313, 948, 1114, 1367 |
| Lsp1109I | GCAGC | 7 cut(s) | 276, 279, 282, 328, 466, 526, 610 |
| LweI | GCATC | 6 cut(s) | 40, 990, 1117, 1318, 1555, 1951 |
| MaeI | CTAG | 3 cut(s) | 45, 212, 1569 |
| MaeII | ACGT | 1 cut(s) | 987 |
| MaeIII | GTNAC | 6 cut(s) | 131, 355, 521, 1309, 1348, 1499 |
| MbiI | CCGCTC | 1 cut(s) | 1828 |
| MflI | RGATCY | 3 cut(s) | 238, 1744, 1990 |
| MhlI | GDGCHC | 2 cut(s) | 1372, 1835 |
| MmeI | TCCRAC | 3 cut(s) | 291, 926, 1134 |
| MreI | CGCCGGCG | 1 cut(s) | 116 |
| MroNI | GCCGGC | 2 cut(s) | 116, 292 |
| MroXI | GAANNNNTTC | 2 cut(s) | 647, 1421 |
| MseI | TTAA | 5 cut(s) | 489, 810, 1212, 1461, 1868 |
| MspI | CCGG | 6 cut(s) | 58, 117, 157, 187, 293, 1006 |
| MspR9I | CCNGG | 7 cut(s) | 187, 417, 596, 921, 977, 1551, 1665 |
| Mva1269I | GAATGC | 1 cut(s) | 1609 |
| MvaI | CCWGG | 6 cut(s) | 417, 596, 921, 977, 1551, 1665 |
| MvnI | CGCG | 3 cut(s) | 234, 298, 378 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 119, 196, 270, 281, 464, 550, 632, 1114, 1591 |
| NaeI | GCCGGC | 2 cut(s) | 118, 294 |
| NciI | CCSGG | 1 cut(s) | 187 |
| NdeI | CATATG | 1 cut(s) | 1491 |
| NgoMIV | GCCGGC | 2 cut(s) | 116, 292 |
| NlaIII | CATG | 5 cut(s) | 668, 728, 862, 1703, 1796 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 382, 440, 1058, 1116 |
| NmeAIII | GCCGAG | 1 cut(s) | 149 |
| NmuCI | GTSAC | 3 cut(s) | 131, 1348, 1499 |
| NspV | TTCGAA | 2 cut(s) | 1415, 1731 |
| PagI | TCATGA | 1 cut(s) | 1699 |
| PctI | GAATGC | 1 cut(s) | 1609 |
| PdiI | GCCGGC | 2 cut(s) | 118, 294 |
| PdmI | GAANNNNTTC | 2 cut(s) | 647, 1421 |
| PfeI | GAWTC | 3 cut(s) | 533, 789, 1679 |
| PflFI | GACNNNGTC | 1 cut(s) | 1781 |
| PpuMI | RGGWCCY | 2 cut(s) | 5, 592 |
| PshAI | GACNNNNGTC | 1 cut(s) | 60 |
| Psp124BI | GAGCTC | 1 cut(s) | 1372 |
| Psp5II | RGGWCCY | 2 cut(s) | 5, 592 |
| Psp6I | CCWGG | 6 cut(s) | 415, 594, 919, 975, 1549, 1663 |
| PspGI | CCWGG | 6 cut(s) | 415, 594, 919, 975, 1549, 1663 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 382, 440, 1058, 1116 |
| PspPI | GGNCC | 2 cut(s) | 5, 592 |
| PspPPI | RGGWCCY | 2 cut(s) | 5, 592 |
| PstI | CTGCAG | 3 cut(s) | 250, 266, 1255 |
| PsuI | RGATCY | 3 cut(s) | 238, 1744, 1990 |
| PsyI | GACNNNGTC | 1 cut(s) | 1781 |
| RsaI | GTAC | 2 cut(s) | 252, 1335 |
| RsaNI | GTAC | 2 cut(s) | 251, 1334 |
| SacI | GAGCTC | 1 cut(s) | 1372 |
| SaqAI | TTAA | 5 cut(s) | 489, 810, 1212, 1461, 1868 |
| Sau96I | GGNCC | 2 cut(s) | 5, 592 |
| ScaI | AGTACT | 1 cut(s) | 1335 |
| ScrFI | CCNGG | 7 cut(s) | 187, 417, 596, 921, 977, 1551, 1665 |
| SduI | GDGCHC | 2 cut(s) | 1372, 1835 |
| SfaNI | GCATC | 6 cut(s) | 40, 990, 1117, 1318, 1555, 1951 |
| SfcI | CTRYAG | 4 cut(s) | 246, 262, 766, 1251 |
| SfuI | TTCGAA | 2 cut(s) | 1415, 1731 |
| SgrAI | CRCCGGYG | 1 cut(s) | 116 |
| SinI | GGWCC | 2 cut(s) | 5, 592 |
| SmiI | ATTTAAAT | 1 cut(s) | 1869 |
| SmlI | CTYRAG | 1 cut(s) | 587 |
| SmoI | CTYRAG | 1 cut(s) | 587 |
| SspI | AATATT | 1 cut(s) | 1131 |
| SspMI | CTAG | 3 cut(s) | 45, 212, 1569 |
| SstI | GAGCTC | 1 cut(s) | 1372 |
| StyD4I | CCNGG | 7 cut(s) | 185, 415, 594, 919, 975, 1549, 1663 |
| StyI | CCWWGG | 2 cut(s) | 504, 1673 |
| SwaI | ATTTAAAT | 1 cut(s) | 1869 |
| TaaI | ACNGT | 5 cut(s) | 131, 309, 944, 1471, 1505 |
| TaiI | ACGT | 1 cut(s) | 990 |
| TaqI | TCGA | 8 cut(s) | 89, 148, 176, 1033, 1415, 1731, 1774, 1947 |
| TatI | WGTACW | 2 cut(s) | 250, 1333 |
| TauI | GCSGC | 4 cut(s) | 116, 234, 278, 983 |
| TfiI | GAWTC | 3 cut(s) | 533, 789, 1679 |
| Tru1I | TTAA | 5 cut(s) | 489, 810, 1212, 1461, 1868 |
| Tru9I | TTAA | 5 cut(s) | 489, 810, 1212, 1461, 1868 |
| TseFI | GTSAC | 3 cut(s) | 131, 1348, 1499 |
| TseI | GCWGC | 7 cut(s) | 264, 267, 270, 316, 479, 514, 623 |
| Tsp45I | GTSAC | 3 cut(s) | 131, 1348, 1499 |
| TspDTI | ATGAA | 8 cut(s) | 334, 711, 744, 1080, 1334, 1671, 1770, 1992 |
| TspGWI | ACGGA | 3 cut(s) | 917, 1116, 1380 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1781 |
| VpaK11BI | GGWCC | 2 cut(s) | 5, 592 |
| XapI | RAATTY | 5 cut(s) | 605, 832, 1078, 1610, 1979 |
| XmiI | GTMKAC | 1 cut(s) | 1257 |
| XmnI | GAANNNNTTC | 2 cut(s) | 647, 1421 |
| XspI | CTAG | 3 cut(s) | 45, 212, 1569 |
| ZraI | GACGTC | 1 cut(s) | 988 |
| ZrmI | AGTACT | 1 cut(s) | 1335 |