Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0016369

Physical Location & Seq

Genomic Coordinates Forward (+)

56892474 .. 56896477

Gene Structure 4004 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG379800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGATCAACTACAGAGATAAACTCGAACGCAGTGTGTCTCTCATTCCGGCAGCCGCTGCTCTCAGTGCGGAGGATCGTGCTGCTCTTGTTAAAGCTCTGGAGACCTTGGTTGGGCAGCATTCTAACAAATTGGAATCACCCGAGCTGAAGAAGCGCATTGAGGCTTTGACAGAAATGCAGCGCCAACTCAAGGACCTGGAAACAGAATTTTTTGTGGAGAGGGCTGCACTGAAAGCTAAACAGAAGCGTTTCCAAGAAGAGGGGCATGACTTTAGGCTTTATTCACTGAAAAATAATGAAGTGCTTGCTAAGGAGATCACAGAGCATGATGAAGAGGCTTTCAAGTATCTCGGTGATATCAACTGCTGTAGGATAGGCAGTTCTAATGGATTCAAGATGGAGTTTATCTTTAATCCTAACCCCTACTTTGAAAATTCTGTATTGAAAAAGACATACCACATGACTAATGACAATAAGCCTATATTGGAGAAGGCGATTGGGACGGAGATCAAGTGGTATCCAGGGAAAATCTTTGCTGAGAACTGTCGGAGCTTCTTCAACTTCTTTCAACCTCTCCAGGCGGCAGACGTCCAAAGTCAGATGCACCGGAGTTATGACATTTTTTCAACAATTCGAGATGAGATCATCCCGCAGTGGCACCAAGTGAATGGGAAAAAGAATTCTCATAATTCAGACAACTATGGAGGGCATCAGGAGCCACTGGAAATAATATTTTTAGGAGAGAGAGCTGTGTTGGAAGGAAAATATCAGAAGCTTTACGAACCTCTCTACGAAAAGAGATATGAGATTGTTAATGGTATAACTGAAGTTCAAGAAACGAAAAGTGAAACTGCAGTAGACCAAGGAGGTAAAGCCACAGAAGAGAAAGGAGTGCCTTACTTTTGGGTTACTGCAATGAAGAATGATGAAGTACTTGGTCAGAAGGTCACAAAGTCTGATGACGGAGCTCTCAAATATCTCAAAGAGATCAAGTGGTGTAGGATAGACAATTCGAAGGGGTTCAAGCTGGAGTTCTTCTTTGATCCAAATCCATATTTTAAAAACACTGTCCTGACAAAAGCATATCATATGAGTAGTGACAGTCAAATGTTAGAGAAGACAACTGGGACAAACATCAACTGGCATCCTGGCAAAAGCTTGACACCTAGTCTTCTGAAGAAGCCAAGAAAGCGATCAAAGAATGCTGAATTCCTGACCAAACAGCAAAGCTTTTTCAACTTTTTTAACACTCCCGAGTATCCTGGGTTTCCTTGGGATTCATCAACTTATACACATCATGATAATTTCCAAAAAATTGAAGATCAATTCGAAGTTCAGAGGGATCTGGATTATGAAGTTGGTAAAACTATTCGAGACAGGGTCATTCCTCATGCAGTATCACTTTTCACTGGGGAAGCTGTTGAGCGGGGCACTTATTTTGAAGATTTAGATGATGATGATGATTTAAATGATGATGATTATTATTCTGATGATGATGATGAGGAGGGTAAGGCTATTGAGCAGGACACTAAGTTTAGACTGTTCGATAATGATGATGATGCGGAGGAGGAGGATGAATTTGAGGAAGATCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000150 GO:0000217 GO:0000400 GO:0000724 GO:0000725 GO:0000730 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003697 GO:0003824 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006312 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009628 GO:0009987 GO:0010212 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022607 GO:0033554 GO:0034622 GO:0034641 GO:0042148 GO:0042623 GO:0043170 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0045003 GO:0046483 GO:0050896 GO:0051716 GO:0065003 GO:0065004 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090735 GO:0097159 GO:0140097 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAP

Protein Analysis

531

Amino Acids

61.85

Weight (kDa)

4.96

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAP	PF00956	89 - 218	2.9e-25	Nucleosome assembly protein (NAP)
NAP	PF00956	239 - 472	5.5e-62	Nucleosome assembly protein (NAP)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0016369)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g30051 FvH4_6g30060 FvH4_6g30063
rosa_chinensis	RchiOBHm_Chr2g0136101
rosa_laevigata	RLG00000019503
rosa_multiflora	Rmu_sc0002070.1_g000009 Rmu_sc0002986.1_g000017
rosa_roxburghii	Rroxscaffold_2G00108490
rosa_rugosa	Rorug02G0328000 Rorug02G0328100
rosa_samantha	Rh2AG379800 Rh2BG386600 Rh2CG365800 Rh2DG402700
rosa_wichuraiana	Rw2G030960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	591
AccB1I	GGYRCC	1 cut(s)	657
AccBSI	CCGCTC	1 cut(s)	1426
AccI	GTMKAC	1 cut(s)	858
AciI	CCGC	6 cut(s)	54, 68, 581, 650, 1426, 1562
AclWI	GGATC	4 cut(s)	81, 1037, 1350, 1583
AcsI	RAATTY	5 cut(s)	206, 433, 679, 1208, 1577
AcuI	CTGAAG	3 cut(s)	167, 846, 1196
AcyI	GRCGYC	1 cut(s)	588
AdeI	CACNNNGTG	1 cut(s)	664
AfaI	GTAC	1 cut(s)	933
AfiI	CCNNNNNNNGG	3 cut(s)	111, 190, 259
AhdI	GACNNNNNGTC	1 cut(s)	1167
AjnI	CCWGG	5 cut(s)	195, 520, 576, 1147, 1261
AloI	GAACNNNNNNTCC	2 cut(s)	364, 396
Alw21I	GWGCWC	1 cut(s)	970
Alw26I	GTCTC	3 cut(s)	42, 95, 1368
AlwI	GGATC	4 cut(s)	81, 1037, 1350, 1583
AlwNI	CAGNNNCTG	1 cut(s)	56
Ama87I	CYCGRG	2 cut(s)	140, 1253
ApeKI	GCWGC	6 cut(s)	50, 56, 80, 115, 178, 224
ApoI	RAATTY	5 cut(s)	206, 433, 679, 1208, 1577
Asp700I	GAANNNNTTC	2 cut(s)	248, 1019
AspLEI	GCGC	2 cut(s)	156, 183
AspS9I	GGNCC	1 cut(s)	193
AsuHPI	GGTGA	2 cut(s)	129, 365
AsuII	TTCGAA	2 cut(s)	1013, 1329
AvaI	CYCGRG	2 cut(s)	140, 1253
AvaII	GGWCC	1 cut(s)	193
BaeGI	GKGCMC	1 cut(s)	1433
BanI	GGYRCC	1 cut(s)	657
BanII	GRGCYC	1 cut(s)	970
BbsI	GAAGAC	2 cut(s)	1124, 1163
Bbv12I	GWGCWC	1 cut(s)	970
BbvI	GCAGC	6 cut(s)	43, 62, 67, 127, 190, 211
BccI	CCATC	1 cut(s)	391
BciT130I	CCWGG	5 cut(s)	197, 522, 578, 1149, 1263
BciVI	GTATCC	2 cut(s)	528, 1269
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	3 cut(s)	42, 95, 1368
BfaI	CTAG	1 cut(s)	1167
BfmI	CTRYAG	3 cut(s)	10, 367, 852
BfoI	RGCGCY	1 cut(s)	184
BfuI	GTATCC	2 cut(s)	528, 1269
BisI	GCNGC	8 cut(s)	51, 54, 57, 81, 116, 179, 225, 582
BlsI	GCNGC	8 cut(s)	52, 55, 58, 82, 117, 180, 226, 583
BmcAI	AGTACT	1 cut(s)	933
Bme1390I	CCNGG	5 cut(s)	197, 522, 578, 1149, 1263
Bme18I	GGWCC	1 cut(s)	193
BmeRI	GACNNNNNGTC	1 cut(s)	1167
BmeT110I	CYCGRG	2 cut(s)	140, 1253
BmgT120I	GGNCC	1 cut(s)	193
BmiI	GGNNCC	2 cut(s)	659, 717
BmrFI	CCNGG	5 cut(s)	197, 522, 578, 1149, 1263
BmrI	ACTGGG	2 cut(s)	1134, 1419
BmsI	GCATC	4 cut(s)	591, 718, 1153, 1549
BmuI	ACTGGG	2 cut(s)	1134, 1419
BpiI	GAAGAC	2 cut(s)	1124, 1163
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	3 cut(s)	119, 560, 1049
Bpu10I	CCTNAGC	1 cut(s)	309
Bpu14I	TTCGAA	2 cut(s)	1013, 1329
BpuEI	CTTGAG	1 cut(s)	173
BsaBI	GATNNNNATC	1 cut(s)	1047
BsaHI	GRCGYC	1 cut(s)	588
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	5 cut(s)	105, 521, 862, 1262, 1271
BsaWI	WCCGGW	1 cut(s)	606
BsaXI	ACNNNNNCTCC	2 cut(s)	497, 527
Bsc4I	CCNNNNNNNGG	3 cut(s)	111, 190, 259
Bse1I	ACTGG	4 cut(s)	726, 1129, 1145, 1414
Bse3DI	GCAATG	1 cut(s)	921
Bse8I	GATNNNNATC	1 cut(s)	1047
BseBI	CCWGG	5 cut(s)	197, 522, 578, 1149, 1263
BseDI	CCNNGG	5 cut(s)	105, 521, 862, 1262, 1271
BseGI	GGATG	3 cut(s)	645, 1144, 1579
BseJI	GATNNNNATC	1 cut(s)	1047
BseLI	CCNNNNNNNGG	3 cut(s)	111, 190, 259
BseMI	GCAATG	1 cut(s)	921
BseMII	CTCAG	2 cut(s)	76, 528
BseNI	ACTGG	4 cut(s)	726, 1129, 1145, 1414
BseRI	GAGGAG	3 cut(s)	1517, 1580, 1583
BseSI	GKGCMC	1 cut(s)	1433
BseXI	GCAGC	6 cut(s)	43, 62, 67, 127, 190, 211
BsgI	GTGCAG	1 cut(s)	210
BshNI	GGYRCC	1 cut(s)	657
BsiHKAI	GWGCWC	1 cut(s)	970
BsiHKCI	CYCGRG	2 cut(s)	140, 1253
BsiSI	CCGG	2 cut(s)	47, 607
BslFI	GGGAC	2 cut(s)	514, 1141
BslI	CCNNNNNNNGG	3 cut(s)	111, 190, 259
BsmAI	GTCTC	3 cut(s)	42, 95, 1368
BsmFI	GGGAC	2 cut(s)	514, 1141
BsmI	GAATGC	2 cut(s)	118, 1207
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	2 cut(s)	140, 1253
Bsp119I	TTCGAA	2 cut(s)	1013, 1329
Bsp1286I	GDGCHC	2 cut(s)	970, 1433
BspACI	CCGC	6 cut(s)	54, 68, 581, 650, 1426, 1562
BspCNI	CTCAG	2 cut(s)	75, 529
BspHI	TCATGA	1 cut(s)	1297
BspLI	GGNNCC	2 cut(s)	659, 717
BspMAI	CTGCAG	1 cut(s)	856
BspPI	GGATC	4 cut(s)	81, 1037, 1350, 1583
BspT104I	TTCGAA	2 cut(s)	1013, 1329
BspT107I	GGYRCC	1 cut(s)	657
BspTNI	GGTCTC	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	1426
BsrDI	GCAATG	1 cut(s)	921
BsrI	ACTGG	4 cut(s)	726, 1129, 1145, 1414
BssECI	CCNNGG	5 cut(s)	105, 521, 862, 1262, 1271
BssNI	GRCGYC	1 cut(s)	588
BssT1I	CCWWGG	3 cut(s)	105, 862, 1271
Bst2UI	CCWGG	5 cut(s)	197, 522, 578, 1149, 1263
Bst4CI	ACNGT	4 cut(s)	545, 1069, 1103, 1542
Bst6I	CTCTTC	3 cut(s)	252, 327, 876
BstACI	GRCGYC	1 cut(s)	588
BstAPI	GCANNNNNTGC	1 cut(s)	56
BstBI	TTCGAA	2 cut(s)	1013, 1329
BstC8I	GCNNGC	1 cut(s)	306
BstDEI	CTNAG	4 cut(s)	62, 309, 537, 1530
BstF5I	GGATG	3 cut(s)	645, 1144, 1579
BstH2I	RGCGCY	1 cut(s)	184
BstHHI	GCGC	2 cut(s)	156, 183
BstMAI	GTCTC	3 cut(s)	42, 95, 1368
BstMWI	GCNNNNNNNGC	6 cut(s)	56, 65, 151, 233, 715, 1189
BstNI	CCWGG	5 cut(s)	197, 522, 578, 1149, 1263
BstSCI	CCNGG	5 cut(s)	195, 520, 576, 1147, 1261
BstSFI	CTRYAG	3 cut(s)	10, 367, 852
BstSLI	GKGCMC	1 cut(s)	1433
BstV1I	GCAGC	6 cut(s)	43, 62, 67, 127, 190, 211
BstV2I	GAAGAC	2 cut(s)	1124, 1163
BstX2I	RGATCY	2 cut(s)	1342, 1588
BstXI	CCANNNNNNTGG	1 cut(s)	668
BstYI	RGATCY	2 cut(s)	1342, 1588
BsuI	GTATCC	2 cut(s)	528, 1269
BtsCI	GGATG	3 cut(s)	645, 1144, 1579
BtsI	GCAGTG	2 cut(s)	37, 659
BtsIMutI	CAGTG	8 cut(s)	37, 70, 227, 284, 659, 719, 1065, 1407
Cac8I	GCNNGC	1 cut(s)	306
CaiI	CAGNNNCTG	1 cut(s)	56
CciI	TCATGA	1 cut(s)	1297
CfoI	GCGC	2 cut(s)	156, 183
Cfr13I	GGNCC	1 cut(s)	193
Csp6I	GTAC	1 cut(s)	932
CviAII	CATG	5 cut(s)	266, 326, 460, 1298, 1391
CviQI	GTAC	1 cut(s)	932
DdeI	CTNAG	4 cut(s)	62, 309, 537, 1530
DraI	TTTAAA	2 cut(s)	1060, 1467
DraIII	CACNNNGTG	1 cut(s)	664
DriI	GACNNNNNGTC	1 cut(s)	1167
Eam1104I	CTCTTC	3 cut(s)	252, 327, 876
Eam1105I	GACNNNNNGTC	1 cut(s)	1167
EarI	CTCTTC	3 cut(s)	252, 327, 876
Ecl136II	GAGCTC	1 cut(s)	968
Eco130I	CCWWGG	3 cut(s)	105, 862, 1271
Eco24I	GRGCYC	1 cut(s)	970
Eco31I	GGTCTC	1 cut(s)	95
Eco32I	GATATC	1 cut(s)	358
Eco47I	GGWCC	1 cut(s)	193
Eco53kI	GAGCTC	1 cut(s)	968
Eco57I	CTGAAG	3 cut(s)	167, 846, 1196
Eco88I	CYCGRG	2 cut(s)	140, 1253
EcoICRI	GAGCTC	1 cut(s)	968
EcoO109I	RGGNCCY	1 cut(s)	193
EcoRI	GAATTC	2 cut(s)	679, 1208
EcoRII	CCWGG	5 cut(s)	195, 520, 576, 1147, 1261
EcoRV	GATATC	1 cut(s)	358
EcoT14I	CCWWGG	3 cut(s)	105, 862, 1271
EcoT38I	GRGCYC	1 cut(s)	970
ErhI	CCWWGG	3 cut(s)	105, 862, 1271
FaeI	CATG	5 cut(s)	269, 329, 463, 1301, 1394
FaqI	GGGAC	2 cut(s)	514, 1141
FatI	CATG	5 cut(s)	265, 325, 459, 1297, 1390
FauI	CCCGC	2 cut(s)	657, 1419
FauNDI	CATATG	1 cut(s)	1089
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	1 cut(s)	858
Fnu4HI	GCNGC	8 cut(s)	51, 54, 57, 81, 116, 179, 225, 582
FokI	GGATG	3 cut(s)	632, 1131, 1586
FriOI	GRGCYC	1 cut(s)	970
Fsp4HI	GCNGC	8 cut(s)	51, 54, 57, 81, 116, 179, 225, 582
FspBI	CTAG	1 cut(s)	1167
GlaI	GCGC	2 cut(s)	155, 182
GluI	GCNGC	8 cut(s)	51, 54, 57, 81, 116, 179, 225, 582
GsuI	CTGGAG	3 cut(s)	119, 560, 1049
HaeII	RGCGCY	1 cut(s)	184
HapII	CCGG	2 cut(s)	47, 607
HhaI	GCGC	2 cut(s)	156, 183
Hin1I	GRCGYC	1 cut(s)	588
Hin1II	CATG	5 cut(s)	269, 329, 463, 1301, 1394
Hin6I	GCGC	2 cut(s)	154, 181
HinP1I	GCGC	2 cut(s)	154, 181
HindIII	AAGCTT	3 cut(s)	773, 1156, 1228
HinfI	GANTC	3 cut(s)	134, 390, 1277
HpaII	CCGG	2 cut(s)	47, 607
HphI	GGTGA	2 cut(s)	129, 365
Hpy166II	GTNNAC	1 cut(s)	859
Hpy188I	TCNGA	9 cut(s)	549, 600, 694, 771, 942, 958, 1176, 1338, 1489
Hpy8I	GTNNAC	1 cut(s)	859
HpyAV	CCTTC	4 cut(s)	484, 752, 937, 1009
HpyCH4III	ACNGT	4 cut(s)	545, 1069, 1103, 1542
HpyCH4IV	ACGT	1 cut(s)	588
HpyCH4V	TGCA	6 cut(s)	178, 227, 604, 854, 914, 1394
HpyF10VI	GCNNNNNNNGC	6 cut(s)	56, 65, 151, 233, 715, 1189
HpyF3I	CTNAG	4 cut(s)	62, 309, 537, 1530
HpySE526I	ACGT	1 cut(s)	588
Hsp92I	GRCGYC	1 cut(s)	588
Hsp92II	CATG	5 cut(s)	269, 329, 463, 1301, 1394
HspAI	GCGC	2 cut(s)	154, 181
Ksp22I	TGATCA	1 cut(s)	3
LmnI	GCTCC	3 cut(s)	549, 715, 965
Lsp1109I	GCAGC	6 cut(s)	43, 62, 67, 127, 190, 211
LweI	GCATC	4 cut(s)	591, 718, 1153, 1549
MaeI	CTAG	1 cut(s)	1167
MaeII	ACGT	1 cut(s)	588
MaeIII	GTNAC	3 cut(s)	907, 946, 1097
MbiI	CCGCTC	1 cut(s)	1426
MflI	RGATCY	2 cut(s)	1342, 1588
MhlI	GDGCHC	2 cut(s)	970, 1433
MmeI	TCCRAC	2 cut(s)	527, 735
MroXI	GAANNNNTTC	2 cut(s)	248, 1019
MseI	TTAA	6 cut(s)	90, 411, 813, 1059, 1245, 1466
MspA1I	CMGCKG	1 cut(s)	56
MspI	CCGG	2 cut(s)	47, 607
MspR9I	CCNGG	5 cut(s)	197, 522, 578, 1149, 1263
Mva1269I	GAATGC	2 cut(s)	118, 1207
MvaI	CCWGG	5 cut(s)	197, 522, 578, 1149, 1263
MwoI	GCNNNNNNNGC	6 cut(s)	56, 65, 151, 233, 715, 1189
NdeI	CATATG	1 cut(s)	1089
NlaIII	CATG	5 cut(s)	269, 329, 463, 1301, 1394
NlaIV	GGNNCC	2 cut(s)	659, 717
NmuCI	GTSAC	2 cut(s)	946, 1097
NspV	TTCGAA	2 cut(s)	1013, 1329
PagI	TCATGA	1 cut(s)	1297
PctI	GAATGC	2 cut(s)	118, 1207
PdmI	GAANNNNTTC	2 cut(s)	248, 1019
PfeI	GAWTC	3 cut(s)	134, 390, 1277
PflFI	GACNNNGTC	1 cut(s)	1379
PkrI	GCNGC	8 cut(s)	52, 55, 58, 82, 117, 180, 226, 583
PpuMI	RGGWCCY	1 cut(s)	193
Psp124BI	GAGCTC	1 cut(s)	970
Psp5II	RGGWCCY	1 cut(s)	193
Psp6I	CCWGG	5 cut(s)	195, 520, 576, 1147, 1261
PspGI	CCWGG	5 cut(s)	195, 520, 576, 1147, 1261
PspN4I	GGNNCC	2 cut(s)	659, 717
PspPI	GGNCC	1 cut(s)	193
PspPPI	RGGWCCY	1 cut(s)	193
PstI	CTGCAG	1 cut(s)	856
PstNI	CAGNNNCTG	1 cut(s)	56
PsuI	RGATCY	2 cut(s)	1342, 1588
PsyI	GACNNNGTC	1 cut(s)	1379
RsaI	GTAC	1 cut(s)	933
RsaNI	GTAC	1 cut(s)	932
SacI	GAGCTC	1 cut(s)	970
SaqAI	TTAA	6 cut(s)	90, 411, 813, 1059, 1245, 1466
SatI	GCNGC	8 cut(s)	51, 54, 57, 81, 116, 179, 225, 582
Sau96I	GGNCC	1 cut(s)	193
ScaI	AGTACT	1 cut(s)	933
ScrFI	CCNGG	5 cut(s)	197, 522, 578, 1149, 1263
SduI	GDGCHC	2 cut(s)	970, 1433
SfaNI	GCATC	4 cut(s)	591, 718, 1153, 1549
SfcI	CTRYAG	3 cut(s)	10, 367, 852
SfuI	TTCGAA	2 cut(s)	1013, 1329
SinI	GGWCC	1 cut(s)	193
SmiI	ATTTAAAT	1 cut(s)	1467
SmlI	CTYRAG	1 cut(s)	188
SmoI	CTYRAG	1 cut(s)	188
SsiI	CCGC	6 cut(s)	54, 68, 581, 650, 1426, 1562
SspI	AATATT	1 cut(s)	732
SspMI	CTAG	1 cut(s)	1167
SstI	GAGCTC	1 cut(s)	970
StyD4I	CCNGG	5 cut(s)	195, 520, 576, 1147, 1261
StyI	CCWWGG	3 cut(s)	105, 862, 1271
SwaI	ATTTAAAT	1 cut(s)	1467
TaaI	ACNGT	4 cut(s)	545, 1069, 1103, 1542
TaiI	ACGT	1 cut(s)	591
TaqI	TCGA	6 cut(s)	24, 634, 1013, 1329, 1372, 1545
TatI	WGTACW	1 cut(s)	931
TauI	GCSGC	2 cut(s)	56, 584
TfiI	GAWTC	3 cut(s)	134, 390, 1277
Tru1I	TTAA	6 cut(s)	90, 411, 813, 1059, 1245, 1466
Tru9I	TTAA	6 cut(s)	90, 411, 813, 1059, 1245, 1466
TscAI	CASTG	8 cut(s)	37, 70, 234, 291, 659, 726, 1072, 1414
TseFI	GTSAC	2 cut(s)	946, 1097
TseI	GCWGC	6 cut(s)	50, 56, 80, 115, 178, 224
Tsp45I	GTSAC	2 cut(s)	946, 1097
TspDTI	ATGAA	7 cut(s)	312, 345, 932, 942, 1269, 1368, 1590
TspGWI	ACGGA	2 cut(s)	518, 978
TspRI	CASTG	8 cut(s)	37, 70, 234, 291, 659, 726, 1072, 1414
Tth111I	GACNNNGTC	1 cut(s)	1379
VpaK11BI	GGWCC	1 cut(s)	193
XapI	RAATTY	5 cut(s)	206, 433, 679, 1208, 1577
XmiI	GTMKAC	1 cut(s)	858
XmnI	GAANNNNTTC	2 cut(s)	248, 1019
XspI	CTAG	1 cut(s)	1167
ZraI	GACGTC	1 cut(s)	589
ZrmI	AGTACT	1 cut(s)	933

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.