Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003841

Physical Location & Seq

Genomic Coordinates Forward (+)

54952489 .. 54957049

Gene Structure 4561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ50805

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGACAATGGCGGCTTTGAATATCCCATATCAGCCATGGCCACCTACACCATCCTCTCTCTCTTTTTCCAAAAATAATATTTCTTTTTTAACCCAATGTAATGGTGCTACTGCTACTATTAATAGTAAATTACTTTCTTTGTCTCATTCTTATCACTTCTCTGTTCTCTCTTCACTCCATGGAACAAACAGACCGAACTCATCATCCAAGCTCTCTTCAATGCCAACCCACCTCTCAAAGTCTGGGACTCTTACTGCAGGCACTGGATGTTCCTGGATGCAAGACAATTCCATGCATCACAATGGTCCTGCCAACAGTGAATGTGGTGAGGGTCCATTGCATTCTGCGTTTCCAGCAAAGGCTGCTGAGATTTCATCTATAGAGGACCTTTATGAGTTTATAAGTTCAGGTCCATTGATGAACAAACTGGGTTTAGCCCCAGAAGCTGTGGCCGAGTCCATTGACAAGTGGTTGGCATATGGTTTACACCTGTGTCGGCTATTTCAGCTCAATGAATTGGACCTCTCAGTTCCTCAGAAAGTTAGGATATATCACTATTATCTTCCGGTCTTTTTTTGGTGTGAAGATCAGATATCTCAGCACAGATCCTTGTACAAAGATGGAGAAGATATACCTCCTCTAGTGATTGGGTTTAGTGCACCACAAGGTTGTGGAAAGACTACACTTGTCTTTGCTCTTGATTATCTTTTCAAAGTAACTGGCAGGAAGTCTGCCACAATATCCATTGATGACTTTTATTTGACAGCTGAGAATCAGGCTAAACTAAGAGAAGCGCATCCAGGAAATGCACTTTTAGAGTTACGTGGAAATGCTGGCAGCCATGATCTTCCATTCTCTGTGGAGACACTGACTGCTCTAAGCAATTTGAGTAAAGAAGGTATGAAGATGAAGCTACCCCGATATGACAAGTCTGCTTACAATGGAAAGGGGGACAGAGCTGATCCTTCGACATGGCCCGAGGTGGAAGGGCCGCTTACTGCTCTTCTATTTGAAGGTTGGATGCTTGGCTTCAAACCCGTTCCTGTGGAAGTTGTCAAAGCAGTCAATCCACAGCTAGAGACAGTAAATAAAAATCTTGAAGCTTATTATGATGCATGGGACAAGTTCGTCAAAGCATGGATAGTCATCAAAATCAAAGATCCCAGCTGTGTCTACCAGTGGCGTCTGCAGGCAGAGATTGCCATGAGAGAGGCAGGAAACCCTGGAATGTCCGATGATGAGGTAAAGGATTTTGTTTCACGGTACTTGCCAGCATACAATGCTTACCTTCCTACCCTTTATGCCGAAGGACCAAAAGGGTCAGATCCAAAGCACCTCATCTTTGTAGAAATTGATGAGGGAAGGAATCCCATCCTTGGTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004849 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006222 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008655 GO:0008887 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009123 GO:0009124 GO:0009129 GO:0009130 GO:0009156 GO:0009161 GO:0009163 GO:0009165 GO:0009173 GO:0009174 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009853 GO:0009941 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018130 GO:0019205 GO:0019206 GO:0019438 GO:0019637 GO:0019693 GO:0031967 GO:0031975 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0043094 GO:0043097 GO:0043174 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046049 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00260 ko00561 ko00630 ko01100 ko01110 ko01130 ko01200 map00260 map00561 map00630 map01100 map01110 map01130 map01200

Pfam Domains

Protein Families

PRK

Protein Analysis

461

Amino Acids

51.01

Weight (kDa)

5.92

Isoelectric Point (pI)

36.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003841)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G80380 AT1G80380 AT1G80380 AT1G80380 AT1G80380 AT1G80380 AT1G80380 AT1G80380
fragaria_vesca	FvH4_6g30840 FvH4_6g30840 FvH4_6g30840 FvH4_6g30840 FvH4_6g30840 FvH4_6g30840 FvH4_6g30840 FvH4_6g30840
malus_domestica	MD17G1198400.v1.1
prunus_persica	Prupe.3G075100_v2.0.a1
pyrus_communis	pycom09g13320 pycom17g20320
rosa_chinensis	RchiOBHm_Chr2g0137281
rosa_laevigata	RLG00000019647
rosa_multiflora	Rmu_sc0000894.1_g000002
rosa_roxburghii	Rroxscaffold_2G00107230 Rroxscaffold_2G00142010 Rroxscaffold_3G00228320 Rroxscaffold_5G00336080 Rroxscaffold_5G00336090
rosa_rugosa	Rorug02G0340700
rosa_samantha	Rh2AG389000 Rh2BG396800 Rh2CG376500 Rh2DG411800
rosa_wichuraiana	Rw2G031900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	401
AasI	GACNNNNNNGTC	1 cut(s)	1127
AccI	GTMKAC	1 cut(s)	1173
AciI	CCGC	2 cut(s)	11, 992
AclWI	GGATC	4 cut(s)	600, 956, 1154, 1319
AcoI	YGGCCR	2 cut(s)	38, 450
AcyI	GRCGYC	1 cut(s)	1183
AfaI	GTAC	2 cut(s)	614, 1265
AfiI	CCNNNNNNNGG	1 cut(s)	1376
AgsI	TTSAA	6 cut(s)	19, 219, 712, 1013, 1033, 1100
AjnI	CCWGG	3 cut(s)	272, 799, 1222
AloI	GAACNNNNNNTCC	2 cut(s)	188, 220
AluBI	AGCT	9 cut(s)	211, 446, 508, 767, 913, 959, 1075, 1103, 1167
AluI	AGCT	9 cut(s)	211, 446, 508, 767, 913, 959, 1075, 1103, 1167
Alw21I	GWGCWC	1 cut(s)	661
Alw26I	GTCTC	3 cut(s)	147, 857, 1073
Alw44I	GTGCAC	1 cut(s)	657
AlwI	GGATC	4 cut(s)	600, 956, 1154, 1319
AlwNI	CAGNNNCTG	2 cut(s)	263, 446
Ama87I	CYCGRG	1 cut(s)	977
AoxI	GGCC	4 cut(s)	38, 450, 974, 989
ApaLI	GTGCAC	1 cut(s)	657
ApeKI	GCWGC	2 cut(s)	362, 837
AseI	ATTAAT	1 cut(s)	120
AspLEI	GCGC	1 cut(s)	796
AspS9I	GGNCC	8 cut(s)	305, 332, 385, 410, 520, 975, 989, 1310
AsuHPI	GGTGA	1 cut(s)	338
AvaI	CYCGRG	1 cut(s)	977
AvaII	GGWCC	6 cut(s)	305, 332, 385, 410, 520, 1310
BaeGI	GKGCMC	1 cut(s)	661
BalI	TGGCCA	1 cut(s)	40
Bbv12I	GWGCWC	1 cut(s)	661
BbvI	GCAGC	2 cut(s)	349, 849
BccI	CCATC	3 cut(s)	58, 614, 1379
BciT130I	CCWGG	3 cut(s)	274, 801, 1224
BcoDI	GTCTC	3 cut(s)	147, 857, 1073
BfaI	CTAG	3 cut(s)	641, 1076, 1384
BfmI	CTRYAG	3 cut(s)	255, 378, 1187
BisI	GCNGC	4 cut(s)	12, 363, 838, 992
BlsI	GCNGC	4 cut(s)	13, 364, 839, 993
Bme1390I	CCNGG	3 cut(s)	274, 801, 1224
Bme18I	GGWCC	6 cut(s)	305, 332, 385, 410, 520, 1310
BmeT110I	CYCGRG	1 cut(s)	977
BmgT120I	GGNCC	8 cut(s)	305, 332, 385, 410, 520, 975, 989, 1310
BmiI	GGNNCC	1 cut(s)	333
BmrFI	CCNGG	3 cut(s)	274, 801, 1224
BmrI	ACTGGG	1 cut(s)	437
BmsI	GCATC	5 cut(s)	267, 304, 805, 1011, 1102
BmuI	ACTGGG	1 cut(s)	437
BsaAI	YACGTR	1 cut(s)	824
BsaBI	GATNNNNATC	1 cut(s)	1145
BsaHI	GRCGYC	1 cut(s)	1183
BsaJI	CCNNGG	5 cut(s)	35, 178, 978, 1222, 1375
BsaWI	WCCGGW	1 cut(s)	565
Bsc4I	CCNNNNNNNGG	1 cut(s)	1376
Bse1I	ACTGG	4 cut(s)	268, 432, 724, 1177
Bse3DI	GCAATG	1 cut(s)	335
Bse8I	GATNNNNATC	1 cut(s)	1145
BseBI	CCWGG	3 cut(s)	274, 801, 1224
BseDI	CCNNGG	5 cut(s)	35, 178, 978, 1222, 1375
BseGI	GGATG	7 cut(s)	50, 203, 272, 282, 796, 1026, 1371
BseJI	GATNNNNATC	1 cut(s)	1145
BseLI	CCNNNNNNNGG	1 cut(s)	1376
BseMI	GCAATG	1 cut(s)	335
BseMII	CTCAG	5 cut(s)	357, 540, 548, 611, 759
BseNI	ACTGG	4 cut(s)	268, 432, 724, 1177
BseRI	GAGGAG	1 cut(s)	627
BseSI	GKGCMC	1 cut(s)	661
BseXI	GCAGC	2 cut(s)	349, 849
BseYI	CCCAGC	1 cut(s)	1163
BshFI	GGCC	4 cut(s)	40, 452, 976, 991
BsiHKAI	GWGCWC	1 cut(s)	661
BsiHKCI	CYCGRG	1 cut(s)	977
BsiSI	CCGG	1 cut(s)	566
BslFI	GGGAC	3 cut(s)	259, 965, 1133
BslI	CCNNNNNNNGG	1 cut(s)	1376
BsmAI	GTCTC	3 cut(s)	147, 857, 1073
BsmFI	GGGAC	3 cut(s)	259, 965, 1133
BsmI	GAATGC	1 cut(s)	340
BsnI	GGCC	4 cut(s)	40, 452, 976, 991
BsoBI	CYCGRG	1 cut(s)	977
Bsp1286I	GDGCHC	1 cut(s)	661
Bsp1407I	TGTACA	1 cut(s)	612
Bsp143I	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
Bsp19I	CCATGG	2 cut(s)	35, 178
BspACI	CCGC	2 cut(s)	11, 992
BspANI	GGCC	4 cut(s)	40, 452, 976, 991
BspCNI	CTCAG	5 cut(s)	358, 539, 547, 610, 760
BspLI	GGNNCC	1 cut(s)	333
BspMAI	CTGCAG	2 cut(s)	259, 1191
BspPI	GGATC	4 cut(s)	600, 956, 1154, 1319
BspQI	GCTCTTC	1 cut(s)	1008
BsrDI	GCAATG	1 cut(s)	335
BsrGI	TGTACA	1 cut(s)	612
BsrI	ACTGG	4 cut(s)	268, 432, 724, 1177
BssECI	CCNNGG	5 cut(s)	35, 178, 978, 1222, 1375
BssMI	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
BssNI	GRCGYC	1 cut(s)	1183
BssT1I	CCWWGG	3 cut(s)	35, 178, 1375
Bst2UI	CCWGG	3 cut(s)	274, 801, 1224
Bst4CI	ACNGT	3 cut(s)	317, 1084, 1263
Bst6I	CTCTTC	3 cut(s)	175, 220, 1008
BstACI	GRCGYC	1 cut(s)	1183
BstAPI	GCANNNNNTGC	3 cut(s)	362, 1199, 1280
BstAUI	TGTACA	1 cut(s)	612
BstBAI	YACGTR	1 cut(s)	824
BstC8I	GCNNGC	4 cut(s)	259, 835, 1191, 1272
BstDEI	CTNAG	7 cut(s)	366, 526, 534, 597, 768, 785, 878
BstDSI	CCRYGG	2 cut(s)	35, 178
BstF5I	GGATG	7 cut(s)	50, 203, 272, 282, 796, 1026, 1371
BstHHI	GCGC	1 cut(s)	796
BstKTI	GATC	6 cut(s)	589, 608, 847, 964, 1162, 1327
BstMAI	GTCTC	3 cut(s)	147, 857, 1073
BstMBI	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
BstMWI	GCNNNNNNNGC	6 cut(s)	353, 362, 443, 505, 1199, 1280
BstNI	CCWGG	3 cut(s)	274, 801, 1224
BstSCI	CCNGG	3 cut(s)	272, 799, 1222
BstSFI	CTRYAG	3 cut(s)	255, 378, 1187
BstSLI	GKGCMC	1 cut(s)	661
BstV1I	GCAGC	2 cut(s)	349, 849
BstX2I	RGATCY	3 cut(s)	605, 1159, 1324
BstXI	CCANNNNNNTGG	1 cut(s)	101
BstYI	RGATCY	3 cut(s)	605, 1159, 1324
BsuRI	GGCC	4 cut(s)	40, 452, 976, 991
BtgI	CCRYGG	2 cut(s)	35, 178
BtsCI	GGATG	7 cut(s)	50, 203, 272, 282, 796, 1026, 1371
BtsIMutI	CAGTG	4 cut(s)	261, 322, 866, 1184
Cac8I	GCNNGC	4 cut(s)	259, 835, 1191, 1272
CaiI	CAGNNNCTG	2 cut(s)	263, 446
CfoI	GCGC	1 cut(s)	796
Cfr13I	GGNCC	8 cut(s)	305, 332, 385, 410, 520, 975, 989, 1310
CseI	GACGC	1 cut(s)	1172
Csp6I	GTAC	2 cut(s)	613, 1264
CviAII	CATG	8 cut(s)	36, 179, 292, 842, 972, 1116, 1137, 1204
CviQI	GTAC	2 cut(s)	613, 1264
DdeI	CTNAG	7 cut(s)	366, 526, 534, 597, 768, 785, 878
DpnI	GATC	6 cut(s)	588, 607, 846, 963, 1161, 1326
DpnII	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
DrdI	GACNNNNNNGTC	1 cut(s)	1127
DseDI	GACNNNNNNGTC	1 cut(s)	1127
EaeI	YGGCCR	2 cut(s)	38, 450
Eam1104I	CTCTTC	3 cut(s)	175, 220, 1008
EarI	CTCTTC	3 cut(s)	175, 220, 1008
Eco130I	CCWWGG	3 cut(s)	35, 178, 1375
Eco32I	GATATC	1 cut(s)	594
Eco47I	GGWCC	6 cut(s)	305, 332, 385, 410, 520, 1310
Eco88I	CYCGRG	1 cut(s)	977
EcoO109I	RGGNCCY	1 cut(s)	385
EcoRII	CCWGG	3 cut(s)	272, 799, 1222
EcoRV	GATATC	1 cut(s)	594
EcoT14I	CCWWGG	3 cut(s)	35, 178, 1375
EcoT22I	ATGCAT	2 cut(s)	297, 1117
ErhI	CCWWGG	3 cut(s)	35, 178, 1375
FaeI	CATG	8 cut(s)	39, 182, 295, 845, 975, 1119, 1140, 1207
FalI	AAGNNNNNCTT	2 cut(s)	978, 1010
FaqI	GGGAC	3 cut(s)	259, 965, 1133
FatI	CATG	8 cut(s)	35, 178, 291, 841, 971, 1115, 1136, 1203
FauNDI	CATATG	1 cut(s)	478
FblI	GTMKAC	1 cut(s)	1173
Fnu4HI	GCNGC	4 cut(s)	12, 363, 838, 992
FokI	GGATG	7 cut(s)	37, 190, 279, 289, 783, 1033, 1358
Fsp4HI	GCNGC	4 cut(s)	12, 363, 838, 992
FspBI	CTAG	3 cut(s)	641, 1076, 1384
GlaI	GCGC	1 cut(s)	795
GluI	GCNGC	4 cut(s)	12, 363, 838, 992
GsaI	CCCAGC	1 cut(s)	1167
HaeIII	GGCC	4 cut(s)	40, 452, 976, 991
HapII	CCGG	1 cut(s)	566
HgaI	GACGC	1 cut(s)	1172
HhaI	GCGC	1 cut(s)	796
Hin1I	GRCGYC	1 cut(s)	1183
Hin1II	CATG	8 cut(s)	39, 182, 295, 845, 975, 1119, 1140, 1207
Hin6I	GCGC	1 cut(s)	794
HinP1I	GCGC	1 cut(s)	794
HindIII	AAGCTT	1 cut(s)	1101
HinfI	GANTC	4 cut(s)	247, 455, 772, 1366
HpaII	CCGG	1 cut(s)	566
HphI	GGTGA	1 cut(s)	338
Hpy166II	GTNNAC	3 cut(s)	485, 659, 1174
Hpy188I	TCNGA	4 cut(s)	537, 591, 1234, 1324
Hpy188III	TCNNGA	2 cut(s)	698, 1097
Hpy8I	GTNNAC	3 cut(s)	485, 659, 1174
HpyAV	CCTTC	7 cut(s)	890, 975, 980, 1007, 1298, 1301, 1356
HpyCH4III	ACNGT	3 cut(s)	317, 1084, 1263
HpyCH4IV	ACGT	1 cut(s)	823
HpyCH4V	TGCA	8 cut(s)	257, 280, 295, 340, 659, 809, 1115, 1189
HpyF10VI	GCNNNNNNNGC	6 cut(s)	353, 362, 443, 505, 1199, 1280
HpyF3I	CTNAG	7 cut(s)	366, 526, 534, 597, 768, 785, 878
HpySE526I	ACGT	1 cut(s)	823
Hsp92I	GRCGYC	1 cut(s)	1183
Hsp92II	CATG	8 cut(s)	39, 182, 295, 845, 975, 1119, 1140, 1207
HspAI	GCGC	1 cut(s)	794
Kzo9I	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
LguI	GCTCTTC	1 cut(s)	1008
Lsp1109I	GCAGC	2 cut(s)	349, 849
LweI	GCATC	5 cut(s)	267, 304, 805, 1011, 1102
MaeI	CTAG	3 cut(s)	641, 1076, 1384
MaeII	ACGT	1 cut(s)	823
MaeIII	GTNAC	3 cut(s)	715, 819, 1379
MalI	GATC	6 cut(s)	588, 607, 846, 963, 1161, 1326
MboI	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
MboII	GAAGA	8 cut(s)	162, 207, 554, 596, 638, 839, 916, 995
MflI	RGATCY	3 cut(s)	605, 1159, 1324
MhlI	GDGCHC	1 cut(s)	661
MlsI	TGGCCA	1 cut(s)	40
MluCI	AATT	5 cut(s)	128, 286, 515, 883, 1350
MluNI	TGGCCA	1 cut(s)	40
MlyI	GAGTC	2 cut(s)	241, 464
MmeI	TCCRAC	1 cut(s)	998
Mox20I	TGGCCA	1 cut(s)	40
Mph1103I	ATGCAT	2 cut(s)	297, 1117
MscI	TGGCCA	1 cut(s)	40
MseI	TTAA	2 cut(s)	89, 120
MslI	CAYNNNNRTG	1 cut(s)	300
Msp20I	TGGCCA	1 cut(s)	40
MspA1I	CMGCKG	2 cut(s)	767, 1167
MspI	CCGG	1 cut(s)	566
MspR9I	CCNGG	3 cut(s)	274, 801, 1224
Mva1269I	GAATGC	1 cut(s)	340
MvaI	CCWGG	3 cut(s)	274, 801, 1224
MwoI	GCNNNNNNNGC	6 cut(s)	353, 362, 443, 505, 1199, 1280
NcoI	CCATGG	2 cut(s)	35, 178
NdeI	CATATG	1 cut(s)	478
NdeII	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
NlaIII	CATG	8 cut(s)	39, 182, 295, 845, 975, 1119, 1140, 1207
NlaIV	GGNNCC	1 cut(s)	333
NmeAIII	GCCGAG	1 cut(s)	478
NsiI	ATGCAT	2 cut(s)	297, 1117
PciSI	GCTCTTC	1 cut(s)	1008
PctI	GAATGC	1 cut(s)	340
PfeI	GAWTC	2 cut(s)	772, 1366
PfoI	TCCNGGA	2 cut(s)	272, 799
PkrI	GCNGC	4 cut(s)	13, 364, 839, 993
PleI	GAGTC	2 cut(s)	241, 463
PpsI	GAGTC	2 cut(s)	241, 463
Ppu21I	YACGTR	1 cut(s)	824
PpuMI	RGGWCCY	1 cut(s)	385
PshBI	ATTAAT	1 cut(s)	120
PsiI	TTATAA	1 cut(s)	401
Psp5II	RGGWCCY	1 cut(s)	385
Psp6I	CCWGG	3 cut(s)	272, 799, 1222
PspFI	CCCAGC	1 cut(s)	1163
PspGI	CCWGG	3 cut(s)	272, 799, 1222
PspN4I	GGNNCC	1 cut(s)	333
PspPI	GGNCC	8 cut(s)	305, 332, 385, 410, 520, 975, 989, 1310
PspPPI	RGGWCCY	1 cut(s)	385
PstI	CTGCAG	2 cut(s)	259, 1191
PstNI	CAGNNNCTG	2 cut(s)	263, 446
PsuI	RGATCY	3 cut(s)	605, 1159, 1324
PvuII	CAGCTG	2 cut(s)	767, 1167
RsaI	GTAC	2 cut(s)	614, 1265
RsaNI	GTAC	2 cut(s)	613, 1264
RseI	CAYNNNNRTG	1 cut(s)	300
SapI	GCTCTTC	1 cut(s)	1008
SaqAI	TTAA	2 cut(s)	89, 120
SatI	GCNGC	4 cut(s)	12, 363, 838, 992
Sau3AI	GATC	6 cut(s)	586, 605, 844, 961, 1159, 1324
Sau96I	GGNCC	8 cut(s)	305, 332, 385, 410, 520, 975, 989, 1310
SchI	GAGTC	2 cut(s)	241, 464
ScrFI	CCNGG	3 cut(s)	274, 801, 1224
SduI	GDGCHC	1 cut(s)	661
SfaNI	GCATC	5 cut(s)	267, 304, 805, 1011, 1102
SfcI	CTRYAG	3 cut(s)	255, 378, 1187
SinI	GGWCC	6 cut(s)	305, 332, 385, 410, 520, 1310
SmiMI	CAYNNNNRTG	1 cut(s)	300
Sse9I	AATT	5 cut(s)	128, 286, 515, 883, 1350
SsiI	CCGC	2 cut(s)	11, 992
SspI	AATATT	1 cut(s)	79
SspMI	CTAG	3 cut(s)	641, 1076, 1384
StyD4I	CCNGG	3 cut(s)	272, 799, 1222
StyI	CCWWGG	3 cut(s)	35, 178, 1375
TaaI	ACNGT	3 cut(s)	317, 1084, 1263
TaiI	ACGT	1 cut(s)	826
TaqI	TCGA	1 cut(s)	968
TaqII	GACCGA	1 cut(s)	208
TasI	AATT	5 cut(s)	128, 286, 515, 883, 1350
TatI	WGTACW	1 cut(s)	612
TauI	GCSGC	2 cut(s)	14, 994
TfiI	GAWTC	2 cut(s)	772, 1366
Tru1I	TTAA	2 cut(s)	89, 120
Tru9I	TTAA	2 cut(s)	89, 120
TscAI	CASTG	4 cut(s)	268, 322, 873, 1184
TseI	GCWGC	2 cut(s)	362, 837
TspDTI	ATGAA	5 cut(s)	363, 434, 528, 917, 923
TspRI	CASTG	4 cut(s)	268, 322, 873, 1184
VneI	GTGCAC	1 cut(s)	657
VpaK11BI	GGWCC	6 cut(s)	305, 332, 385, 410, 520, 1310
VspI	ATTAAT	1 cut(s)	120
XcmI	CCANNNNNNNNNTGG	1 cut(s)	33
XmiI	GTMKAC	1 cut(s)	1173
XspI	CTAG	3 cut(s)	641, 1076, 1384
Zsp2I	ATGCAT	2 cut(s)	297, 1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.