Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007980

Physical Location & Seq

Genomic Coordinates Forward (+)

27567015 .. 27576561

Gene Structure 9547 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44648

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGCAACCACCTCCTCCTTCTCCTTCTCTATCCCAAACCCTAACCCTAACCCTAGAACCTCTTCTCTTCCACTCTCCAAGCAGCTCTTCGGTTTCAGCTTGCCTTCTTCTTCCACCGCCAAAACCACCACACTCAAACTCCGCTCCCGAAACCCTACCTCCTTCACTCCAACACCTATCAAATGCTCCGTTTCAGAAGCCACCGCCCCCGTCGAGAAGAAGAAATTGATGAGGAGAAGTGACATAAGGAACATAGCCATTGTAGCCCATGTTGATCATGGAAAGACAACTCTGGTTGATTCCATGTTGAGGCAAGCAAAGGTGTTTCGCGATAACCAAGTTGTCCAAGAAAGGATAATGGACTCCAATGATATAGAGCGTGAAAGAGGGATTACAATTTTGAGTAAAAACACATCCATTACGTATAAAGACTCGAAAATTAATATCATTGATACTCCTGGCCATTCTGACTTTGGAGGGGAGGTCGAGCGCATCCTCAATATGGTGGAAGGGATTCTTTTAGTGGTAGATTCTGTTGAGGGCCCGATGCCACAGACAAGATTTGTTTTGAAGAAGGCTCTGGAATTCGGACATGCTGTCGTTGTTGTTGTCAATAAAATTGATAGGCCTTCCGCCCGTCCGGATTTTGTGATCAATTCCACTTTTGAACTCTTTATTGAACTAAATGCTACTGATGAACAGTGTGATTTTCAAGCAATATATGCTAGTGGGATTAAAGGAAAGGCGGGCTTATCGGCTGATAATCTGTCAGACGATCTTGGGCCCCTTTTTGAGGCCATAATGAGATGCATCCCTGGACCGGCCATTGAAGATGGTGCACTGCAAATGCTTGCTACAAATATCGAGTACGATGAGCATAAAGGTCGAATAGCTATTGGACGCTTGCATGCTGGGGAACTTCGGAAAGGAATGGATGTGAAGGTATGTACCTCAGAAGATTCCTGTCGGTTTGCTAAAGTTAGTGAGCTTTTTGTGTATGAGAAGTTCAATAGGGTTTCAGTAGACAGTGTAAAGGCTGGTGATATATGTGCTGTTTGTGGAATTAATGATATTCAGATTGGTGAGACAATTGCTGATAAGACAGATGGGAAGCCATTACCTGCCATTAGGGTGGAGGAACCAACAGTGAAAATGGCTTTCGCTATAAACACTTCACCATTTGTTGGGCGCGAGGGAAAGTATGTTACCAGTAGGAACTTGCGAGATCGGCTTTCTCGTGAGCTTGAGCGTAACTTGGCAATGAAAGTTGAAGATGGTGAAACAGCAGATACCTTCATTGTTAGTGGACGAGGCACTTTGCATATTACCATATTGATTGAGAACATGCGAAGAGAAGGATTTGAATTTATGGTCGGACCTCCCAAAGTTATTAACAAAAGGGTGAATGACAAGTTGCTGGAACCTTATGAGATTGCCACTGTAGAGGTGCCAGAAGAGCACATGGGTCCGGTCGTTGAACTTCTTGGCAAAAGGCGGGGGCAAATGATTGATATGCAGGGGCTTGGGTCAGAAGGCACAAACCTGATCAAATATAAGATTCCAACTCGTGGCCTTCTTGGTTTACGAAATGCAATTTTAACAGCTTCTCGTGGCACAGCTATTCTGAATACAATATTTGATAGCTATGGACCTTGGGCTGGTGATATGAGTACCCGGGATCTGGGTTCACTGGTTGCCTTTGAGGGTGGAACGAGTACTTCTTATGCCCTTTCTAGTTCACAGGATAGAGGACAGTTGTTTATTGGTCCTGGGGTGGATGTTTATAAAGGTCAGATAGTTGGCATCCATCAGCGGTCTGGGGACTTATCTCTTAACGTATGTAAAAAGAAGGCTGCAACAAACATCCGTTCCAACAAAGAACAATCAGTCATTCTTGATACCCCATTGGATTACAGTCTGGATGACTGCATTGAGTACATTCAAGAGGATGAACTGGTGGAGGTCACTCCATTGAGCATCCGGATGTGCAAAAACCCCAAGTTCTCAAAGAAATCATCAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0031647 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050821 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C GTP_EFTU GTP_EFTU_D2

Protein Analysis

674

Amino Acids

74.22

Weight (kDa)

6.79

Isoelectric Point (pI)

39.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	81 - 272	9.6e-53	Elongation factor Tu GTP binding domain
EF-G_D2	PF22042	284 - 365	5.7e-09	Elongation factor G domain 2
GTP_EFTU_D2	PF03144	295 - 365	1.8e-11	Elongation factor Tu domain 2
EFG_C	PF00679	471 - 557	2.1e-21	Elongation factor G C-terminus
BipA_C	PF21018	562 - 665	4.4e-38	TypA/BipA C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13650 AT5G13650
fragaria_vesca	FvH4_6g23530 FvH4_6g23530 FvH4_6g23530 FvH4_6g23530
malus_domestica	MD07G1028800.v1.1 MD12G1072500.v1.1 MD14G1069900.v1.1
prunus_persica	Prupe.7G064400_v2.0.a1
pyrus_communis	pycom12g06100 pycom12g06110 pycom14g05790
rosa_chinensis	RchiOBHm_Chr3g0481531
rosa_laevigata	RLG00000023388
rosa_multiflora	Rmu_sc0010846.1_g000003 Rmu_sc0040423.1_g000001
rosa_roxburghii	Rroxscaffold_6G00400150 Rroxscaffold_6G00400350
rosa_rugosa	Rorug03G0192500
rosa_samantha	Rh3AG243700 Rh3BG278800 Rh3DG270600
rosa_wichuraiana	Rw3G021770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1785
Acc36I	ACCTGC	1 cut(s)	1129
AccB1I	GGYRCC	1 cut(s)	1447
AccB7I	CCANNNNNTGG	2 cut(s)	1184, 1568
AccBSI	CCGCTC	1 cut(s)	144
AccI	GTMKAC	1 cut(s)	1023
AccII	CGCG	2 cut(s)	330, 1191
AccIII	TCCGGA	2 cut(s)	640, 1980
AciI	CCGC	7 cut(s)	117, 142, 204, 633, 746, 1495, 1813
AclWI	GGATC	1 cut(s)	1686
AcoI	YGGCCR	2 cut(s)	460, 822
AcsI	RAATTY	2 cut(s)	584, 1364
AfaI	GTAC	5 cut(s)	869, 949, 1672, 1717, 1937
AfiI	CCNNNNNNNGG	8 cut(s)	309, 502, 793, 820, 1184, 1568, 1658, 1681
AhdI	GACNNNNNGTC	1 cut(s)	596
AjnI	CCWGG	3 cut(s)	457, 814, 1768
AjuI	GAANNNNNNNTTGG	2 cut(s)	71, 103
AluBI	AGCT	8 cut(s)	85, 99, 893, 988, 1243, 1604, 1619, 1644
AluI	AGCT	8 cut(s)	85, 99, 893, 988, 1243, 1604, 1619, 1644
Alw21I	GWGCWC	2 cut(s)	841, 1461
Alw26I	GTCTC	1 cut(s)	1079
Alw44I	GTGCAC	1 cut(s)	837
AlwI	GGATC	1 cut(s)	1686
Ama87I	CYCGRG	1 cut(s)	1674
Aor13HI	TCCGGA	2 cut(s)	640, 1980
AoxI	GGCC	7 cut(s)	460, 541, 626, 782, 795, 822, 1570
ApaI	GGGCCC	2 cut(s)	545, 786
ApaLI	GTGCAC	1 cut(s)	837
ApeKI	GCWGC	2 cut(s)	82, 1853
ApoI	RAATTY	2 cut(s)	584, 1364
AseI	ATTAAT	2 cut(s)	441, 1065
Asp700I	GAANNNNTTC	2 cut(s)	61, 513
AspLEI	GCGC	2 cut(s)	492, 1191
AspS9I	GGNCC	9 cut(s)	541, 542, 782, 783, 818, 1376, 1466, 1649, 1766
AsuC2I	CCSGG	2 cut(s)	1675, 1676
AsuHPI	GGTGA	6 cut(s)	1052, 1094, 1167, 1289, 1414, 1673
AvaI	CYCGRG	1 cut(s)	1674
AvaII	GGWCC	5 cut(s)	818, 1376, 1466, 1649, 1766
BaeGI	GKGCMC	3 cut(s)	545, 786, 841
BalI	TGGCCA	1 cut(s)	462
BanI	GGYRCC	1 cut(s)	1447
BanII	GRGCYC	2 cut(s)	545, 786
BauI	CACGAG	3 cut(s)	1236, 1566, 1608
Bbv12I	GWGCWC	2 cut(s)	841, 1461
BbvI	GCAGC	2 cut(s)	94, 1840
BccI	CCATC	4 cut(s)	827, 1100, 1268, 1815
BcgI	CGANNNNNNTGC	2 cut(s)	866, 900
BciT130I	CCWGG	3 cut(s)	459, 816, 1770
BclI	TGATCA	3 cut(s)	274, 651, 1545
BcnI	CCSGG	2 cut(s)	1675, 1676
BcoDI	GTCTC	1 cut(s)	1079
BfaI	CTAG	3 cut(s)	54, 726, 1734
BfmI	CTRYAG	1 cut(s)	1440
BfuAI	ACCTGC	1 cut(s)	1129
BisI	GCNGC	2 cut(s)	83, 1854
BlsI	GCNGC	2 cut(s)	84, 1855
BmcAI	AGTACT	1 cut(s)	1717
Bme1390I	CCNGG	5 cut(s)	459, 816, 1675, 1676, 1770
Bme18I	GGWCC	5 cut(s)	818, 1376, 1466, 1649, 1766
BmeRI	GACNNNNNGTC	1 cut(s)	596
BmeT110I	CYCGRG	1 cut(s)	1674
BmgT120I	GGNCC	9 cut(s)	541, 542, 782, 783, 818, 1376, 1466, 1649, 1766
BmiI	GGNNCC	7 cut(s)	543, 784, 785, 1140, 1422, 1449, 1467
BmrFI	CCNGG	5 cut(s)	459, 816, 1675, 1676, 1770
BmsI	GCATC	6 cut(s)	501, 537, 797, 819, 1812, 1986
BpuEI	CTTGAG	1 cut(s)	1265
BpuMI	CCSGG	2 cut(s)	1675, 1676
BsaAI	YACGTR	1 cut(s)	423
BsaJI	CCNNGG	4 cut(s)	814, 1652, 1674, 1769
BsaWI	WCCGGW	3 cut(s)	640, 1468, 1980
BsaXI	ACNNNNNCTCC	6 cut(s)	123, 143, 153, 173, 468, 498
Bsc4I	CCNNNNNNNGG	8 cut(s)	309, 502, 793, 820, 1184, 1568, 1658, 1681
Bse118I	RCCGGY	1 cut(s)	820
Bse1I	ACTGG	3 cut(s)	1209, 1695, 1959
Bse3DI	GCAATG	1 cut(s)	1266
BseAI	TCCGGA	2 cut(s)	640, 1980
BseBI	CCWGG	3 cut(s)	459, 816, 1770
BseDI	CCNNGG	4 cut(s)	814, 1652, 1674, 1769
BseLI	CCNNNNNNNGG	8 cut(s)	309, 502, 793, 820, 1184, 1568, 1658, 1681
BseMI	GCAATG	1 cut(s)	1266
BseMII	CTCAG	1 cut(s)	966
BseNI	ACTGG	3 cut(s)	1209, 1695, 1959
BseRI	GAGGAG	2 cut(s)	4, 247
BseSI	GKGCMC	3 cut(s)	545, 786, 841
BseXI	GCAGC	2 cut(s)	94, 1840
BseYI	CCCAGC	1 cut(s)	911
Bsh1236I	CGCG	2 cut(s)	330, 1191
Bsh1285I	CGRYCG	1 cut(s)	1473
BshFI	GGCC	7 cut(s)	462, 543, 628, 784, 797, 824, 1572
BshNI	GGYRCC	1 cut(s)	1447
BsiEI	CGRYCG	1 cut(s)	1473
BsiHKAI	GWGCWC	2 cut(s)	841, 1461
BsiHKCI	CYCGRG	1 cut(s)	1674
BsiSI	CCGG	5 cut(s)	641, 821, 1469, 1675, 1981
BslFI	GGGAC	1 cut(s)	1835
BslI	CCNNNNNNNGG	8 cut(s)	309, 502, 793, 820, 1184, 1568, 1658, 1681
BsmAI	GTCTC	1 cut(s)	1079
BsmFI	GGGAC	1 cut(s)	1835
BsnI	GGCC	7 cut(s)	462, 543, 628, 784, 797, 824, 1572
BsoBI	CYCGRG	1 cut(s)	1674
Bsp120I	GGGCCC	2 cut(s)	541, 782
Bsp1286I	GDGCHC	4 cut(s)	545, 786, 841, 1461
Bsp13I	TCCGGA	2 cut(s)	640, 1980
Bsp143I	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
Bsp68I	TCGCGA	1 cut(s)	330
BspACI	CCGC	7 cut(s)	117, 142, 204, 633, 746, 1495, 1813
BspANI	GGCC	7 cut(s)	462, 543, 628, 784, 797, 824, 1572
BspCNI	CTCAG	1 cut(s)	965
BspEI	TCCGGA	2 cut(s)	640, 1980
BspFNI	CGCG	2 cut(s)	330, 1191
BspLI	GGNNCC	7 cut(s)	543, 784, 785, 1140, 1422, 1449, 1467
BspMI	ACCTGC	1 cut(s)	1129
BspPI	GGATC	1 cut(s)	1686
BspQI	GCTCTTC	2 cut(s)	92, 1449
BspT107I	GGYRCC	1 cut(s)	1447
BsrBI	CCGCTC	1 cut(s)	144
BsrDI	GCAATG	1 cut(s)	1266
BsrFI	RCCGGY	1 cut(s)	820
BsrI	ACTGG	3 cut(s)	1209, 1695, 1959
BssAI	RCCGGY	1 cut(s)	820
BssECI	CCNNGG	4 cut(s)	814, 1652, 1674, 1769
BssMI	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
BssSI	CACGAG	3 cut(s)	1236, 1566, 1608
BssT1I	CCWWGG	1 cut(s)	1652
Bst2BI	CACGAG	3 cut(s)	1236, 1566, 1608
Bst2UI	CCWGG	3 cut(s)	459, 816, 1770
Bst4CI	ACNGT	6 cut(s)	702, 1028, 1147, 1441, 1755, 1916
Bst6I	CTCTTC	5 cut(s)	67, 72, 92, 1345, 1449
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstBAI	YACGTR	1 cut(s)	423
BstC8I	GCNNGC	6 cut(s)	101, 315, 748, 852, 905, 909
BstDEI	CTNAG	1 cut(s)	952
BstENI	CCTNNNNNAGG	1 cut(s)	791
BstFNI	CGCG	2 cut(s)	330, 1191
BstHHI	GCGC	2 cut(s)	492, 1191
BstKTI	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
BstMAI	GTCTC	1 cut(s)	1079
BstMBI	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
BstMCI	CGRYCG	1 cut(s)	1473
BstMWI	GCNNNNNNNGC	4 cut(s)	263, 722, 1228, 1456
BstNI	CCWGG	3 cut(s)	459, 816, 1770
BstNSI	RCATGY	3 cut(s)	596, 911, 1348
BstSCI	CCNGG	5 cut(s)	457, 814, 1673, 1674, 1768
BstSFI	CTRYAG	1 cut(s)	1440
BstSLI	GKGCMC	3 cut(s)	545, 786, 841
BstSNI	TACGTA	1 cut(s)	423
BstUI	CGCG	2 cut(s)	330, 1191
BstV1I	GCAGC	2 cut(s)	94, 1840
BstX2I	RGATCY	1 cut(s)	1678
BstXI	CCANNNNNNTGG	1 cut(s)	1132
BstYI	RGATCY	1 cut(s)	1678
BsuRI	GGCC	7 cut(s)	462, 543, 628, 784, 797, 824, 1572
BtsI	GCAGTG	1 cut(s)	839
BtsIMutI	CAGTG	6 cut(s)	707, 839, 1033, 1152, 1437, 1688
BtuMI	TCGCGA	1 cut(s)	330
BveI	ACCTGC	1 cut(s)	1129
Cac8I	GCNNGC	6 cut(s)	101, 315, 748, 852, 905, 909
CfoI	GCGC	2 cut(s)	492, 1191
Cfr10I	RCCGGY	1 cut(s)	820
Cfr13I	GGNCC	9 cut(s)	541, 542, 782, 783, 818, 1376, 1466, 1649, 1766
Cfr9I	CCCGGG	1 cut(s)	1674
CseI	GACGC	1 cut(s)	909
Csp6I	GTAC	5 cut(s)	868, 948, 1671, 1716, 1936
CviAII	CATG	7 cut(s)	269, 278, 304, 593, 908, 1345, 1462
CviQI	GTAC	5 cut(s)	868, 948, 1671, 1716, 1936
DdeI	CTNAG	1 cut(s)	952
DpnI	GATC	6 cut(s)	276, 653, 777, 1227, 1547, 1680
DpnII	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
DriI	GACNNNNNGTC	1 cut(s)	596
EaeI	YGGCCR	2 cut(s)	460, 822
Eam1104I	CTCTTC	5 cut(s)	67, 72, 92, 1345, 1449
Eam1105I	GACNNNNNGTC	1 cut(s)	596
EarI	CTCTTC	5 cut(s)	67, 72, 92, 1345, 1449
EciI	GGCGGA	1 cut(s)	622
Eco105I	TACGTA	1 cut(s)	423
Eco130I	CCWWGG	1 cut(s)	1652
Eco147I	AGGCCT	1 cut(s)	628
Eco24I	GRGCYC	2 cut(s)	545, 786
Eco47I	GGWCC	5 cut(s)	818, 1376, 1466, 1649, 1766
Eco88I	CYCGRG	1 cut(s)	1674
EcoNI	CCTNNNNNAGG	1 cut(s)	791
EcoO109I	RGGNCCY	2 cut(s)	541, 783
EcoRI	GAATTC	1 cut(s)	584
EcoRII	CCWGG	3 cut(s)	457, 814, 1768
EcoT14I	CCWWGG	1 cut(s)	1652
EcoT22I	ATGCAT	1 cut(s)	812
EcoT38I	GRGCYC	2 cut(s)	545, 786
ErhI	CCWWGG	1 cut(s)	1652
FaeI	CATG	7 cut(s)	272, 281, 307, 596, 911, 1348, 1465
FalI	AAGNNNNNCTT	6 cut(s)	71, 103, 501, 533, 734, 766
FaqI	GGGAC	1 cut(s)	1835
FatI	CATG	7 cut(s)	268, 277, 303, 592, 907, 1344, 1461
FauI	CCCGC	2 cut(s)	739, 1488
FbaI	TGATCA	3 cut(s)	274, 651, 1545
FblI	GTMKAC	1 cut(s)	1023
Fnu4HI	GCNGC	2 cut(s)	83, 1854
FriOI	GRGCYC	2 cut(s)	545, 786
Fsp4HI	GCNGC	2 cut(s)	83, 1854
FspBI	CTAG	3 cut(s)	54, 726, 1734
GlaI	GCGC	2 cut(s)	491, 1190
GluI	GCNGC	2 cut(s)	83, 1854
GsaI	CCCAGC	1 cut(s)	915
HaeIII	GGCC	7 cut(s)	462, 543, 628, 784, 797, 824, 1572
HapII	CCGG	5 cut(s)	641, 821, 1469, 1675, 1981
HgaI	GACGC	1 cut(s)	909
HhaI	GCGC	2 cut(s)	492, 1191
Hin1II	CATG	7 cut(s)	272, 281, 307, 596, 911, 1348, 1465
Hin6I	GCGC	2 cut(s)	490, 1189
HinP1I	GCGC	2 cut(s)	490, 1189
HinfI	GANTC	7 cut(s)	299, 362, 431, 514, 530, 959, 1558
HpaII	CCGG	5 cut(s)	641, 821, 1469, 1675, 1981
HphI	GGTGA	6 cut(s)	1052, 1094, 1167, 1289, 1414, 1673
Hpy166II	GTNNAC	6 cut(s)	839, 1024, 1307, 1583, 1688, 1739
Hpy8I	GTNNAC	6 cut(s)	839, 1024, 1307, 1583, 1688, 1739
Hpy99I	CGWCG	1 cut(s)	215
HpyCH4III	ACNGT	6 cut(s)	702, 1028, 1147, 1441, 1755, 1916
HpyCH4IV	ACGT	2 cut(s)	422, 1836
HpyF10VI	GCNNNNNNNGC	4 cut(s)	263, 722, 1228, 1456
HpyF3I	CTNAG	1 cut(s)	952
HpySE526I	ACGT	2 cut(s)	422, 1836
Hsp92II	CATG	7 cut(s)	272, 281, 307, 596, 911, 1348, 1465
HspAI	GCGC	2 cut(s)	490, 1189
Kpn2I	TCCGGA	2 cut(s)	640, 1980
Ksp22I	TGATCA	3 cut(s)	274, 651, 1545
Kzo9I	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
LguI	GCTCTTC	2 cut(s)	92, 1449
LmnI	GCTCC	2 cut(s)	149, 191
Lsp1109I	GCAGC	2 cut(s)	94, 1840
LweI	GCATC	6 cut(s)	501, 537, 797, 819, 1812, 1986
MaeI	CTAG	3 cut(s)	54, 726, 1734
MaeII	ACGT	2 cut(s)	422, 1836
MaeIII	GTNAC	4 cut(s)	239, 1204, 1250, 1963
MalI	GATC	6 cut(s)	276, 653, 777, 1227, 1547, 1680
MbiI	CCGCTC	1 cut(s)	144
MboI	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
MfeI	CAATTG	1 cut(s)	1089
MflI	RGATCY	1 cut(s)	1678
MhlI	GDGCHC	4 cut(s)	545, 786, 841, 1461
MlsI	TGGCCA	1 cut(s)	462
MluNI	TGGCCA	1 cut(s)	462
MlyI	GAGTC	2 cut(s)	356, 425
MmeI	TCCRAC	4 cut(s)	194, 1354, 1586, 1896
Mox20I	TGGCCA	1 cut(s)	462
Mph1103I	ATGCAT	1 cut(s)	812
MroI	TCCGGA	2 cut(s)	640, 1980
MroXI	GAANNNNTTC	2 cut(s)	61, 513
MscI	TGGCCA	1 cut(s)	462
MseI	TTAA	6 cut(s)	441, 735, 1065, 1392, 1598, 1833
MslI	CAYNNNNRTG	2 cut(s)	1130, 1982
Msp20I	TGGCCA	1 cut(s)	462
MspA1I	CMGCKG	1 cut(s)	1813
MspI	CCGG	5 cut(s)	641, 821, 1469, 1675, 1981
MspR9I	CCNGG	5 cut(s)	459, 816, 1675, 1676, 1770
MunI	CAATTG	1 cut(s)	1089
MvaI	CCWGG	3 cut(s)	459, 816, 1770
MvnI	CGCG	2 cut(s)	330, 1191
MwoI	GCNNNNNNNGC	4 cut(s)	263, 722, 1228, 1456
NciI	CCSGG	2 cut(s)	1675, 1676
NdeII	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
NlaIII	CATG	7 cut(s)	272, 281, 307, 596, 911, 1348, 1465
NlaIV	GGNNCC	7 cut(s)	543, 784, 785, 1140, 1422, 1449, 1467
NmuCI	GTSAC	2 cut(s)	239, 1963
NruI	TCGCGA	1 cut(s)	330
NsiI	ATGCAT	1 cut(s)	812
NspI	RCATGY	3 cut(s)	596, 911, 1348
PaeI	GCATGC	1 cut(s)	911
PceI	AGGCCT	1 cut(s)	628
PciSI	GCTCTTC	2 cut(s)	92, 1449
PcsI	WCGNNNNNNNCGW	1 cut(s)	1234
PdmI	GAANNNNTTC	2 cut(s)	61, 513
PfeI	GAWTC	5 cut(s)	299, 514, 530, 959, 1558
PflMI	CCANNNNNTGG	2 cut(s)	1184, 1568
PkrI	GCNGC	2 cut(s)	84, 1855
PleI	GAGTC	2 cut(s)	356, 425
PpsI	GAGTC	2 cut(s)	356, 425
Ppu21I	YACGTR	1 cut(s)	423
PshBI	ATTAAT	2 cut(s)	441, 1065
PsiI	TTATAA	1 cut(s)	1785
Psp6I	CCWGG	3 cut(s)	457, 814, 1768
PspFI	CCCAGC	1 cut(s)	911
PspGI	CCWGG	3 cut(s)	457, 814, 1768
PspN4I	GGNNCC	7 cut(s)	543, 784, 785, 1140, 1422, 1449, 1467
PspOMI	GGGCCC	2 cut(s)	541, 782
PspPI	GGNCC	9 cut(s)	541, 542, 782, 783, 818, 1376, 1466, 1649, 1766
PsrI	GAACNNNNNNTAC	2 cut(s)	989, 1021
PsuI	RGATCY	1 cut(s)	1678
RruI	TCGCGA	1 cut(s)	330
RsaI	GTAC	5 cut(s)	869, 949, 1672, 1717, 1937
RsaNI	GTAC	5 cut(s)	868, 948, 1671, 1716, 1936
RseI	CAYNNNNRTG	2 cut(s)	1130, 1982
SapI	GCTCTTC	2 cut(s)	92, 1449
SaqAI	TTAA	6 cut(s)	441, 735, 1065, 1392, 1598, 1833
SatI	GCNGC	2 cut(s)	83, 1854
Sau3AI	GATC	6 cut(s)	274, 651, 775, 1225, 1545, 1678
Sau96I	GGNCC	9 cut(s)	541, 542, 782, 783, 818, 1376, 1466, 1649, 1766
ScaI	AGTACT	1 cut(s)	1717
SchI	GAGTC	2 cut(s)	356, 425
ScrFI	CCNGG	5 cut(s)	459, 816, 1675, 1676, 1770
SduI	GDGCHC	4 cut(s)	545, 786, 841, 1461
SfaNI	GCATC	6 cut(s)	501, 537, 797, 819, 1812, 1986
SfcI	CTRYAG	1 cut(s)	1440
SinI	GGWCC	5 cut(s)	818, 1376, 1466, 1649, 1766
SmaI	CCCGGG	1 cut(s)	1676
SmiMI	CAYNNNNRTG	2 cut(s)	1130, 1982
SmlI	CTYRAG	1 cut(s)	1244
SmoI	CTYRAG	1 cut(s)	1244
SnaBI	TACGTA	1 cut(s)	423
SphI	GCATGC	1 cut(s)	911
SseBI	AGGCCT	1 cut(s)	628
SsiI	CCGC	7 cut(s)	117, 142, 204, 633, 746, 1495, 1813
SspI	AATATT	1 cut(s)	1635
SspMI	CTAG	3 cut(s)	54, 726, 1734
StuI	AGGCCT	1 cut(s)	628
StyD4I	CCNGG	5 cut(s)	457, 814, 1673, 1674, 1768
StyI	CCWWGG	1 cut(s)	1652
TaaI	ACNGT	6 cut(s)	702, 1028, 1147, 1441, 1755, 1916
TaiI	ACGT	2 cut(s)	425, 1839
TaqI	TCGA	5 cut(s)	213, 434, 486, 864, 886
TatI	WGTACW	2 cut(s)	1715, 1935
TfiI	GAWTC	5 cut(s)	299, 514, 530, 959, 1558
Tru1I	TTAA	6 cut(s)	441, 735, 1065, 1392, 1598, 1833
Tru9I	TTAA	6 cut(s)	441, 735, 1065, 1392, 1598, 1833
TscAI	CASTG	6 cut(s)	707, 846, 1033, 1152, 1444, 1695
TseFI	GTSAC	2 cut(s)	239, 1963
TseI	GCWGC	2 cut(s)	82, 1853
Tsp45I	GTSAC	2 cut(s)	239, 1963
TspDTI	ATGAA	4 cut(s)	711, 1277, 1285, 1965
TspGWI	ACGGA	2 cut(s)	178, 1856
TspMI	CCCGGG	1 cut(s)	1674
TspRI	CASTG	6 cut(s)	707, 846, 1033, 1152, 1444, 1695
Van91I	CCANNNNNTGG	2 cut(s)	1184, 1568
VneI	GTGCAC	1 cut(s)	837
VpaK11BI	GGWCC	5 cut(s)	818, 1376, 1466, 1649, 1766
VspI	ATTAAT	2 cut(s)	441, 1065
XagI	CCTNNNNNAGG	1 cut(s)	791
XapI	RAATTY	2 cut(s)	584, 1364
XceI	RCATGY	3 cut(s)	596, 911, 1348
XcmI	CCANNNNNNNNNTGG	3 cut(s)	275, 470, 1814
XmaI	CCCGGG	1 cut(s)	1674
XmiI	GTMKAC	1 cut(s)	1023
XmnI	GAANNNNTTC	2 cut(s)	61, 513
XspI	CTAG	3 cut(s)	54, 726, 1734
ZrmI	AGTACT	1 cut(s)	1717
Zsp2I	ATGCAT	1 cut(s)	812

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.