Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0007980

Physical Location & Seq

Genomic Coordinates Reverse (-)

22464294 .. 22472675

Gene Structure 8382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00400350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGAAATGGCAACCAGCTGCTCCTTCTCTATCCCAAACCCTAACCCTAGAACCTCTTCTCTTCCACTCTCCAAGCAACTCTTCGGTTTCAGCTTACCTTCTTCTTCCACCGCCAAAACCACCACACTCAAACTCCGCTCCCGAAACCCTACCTCCTTCACTCCAACACCTATCAAATGCTCCGTTTCAGAAGCCACCGAAGCCGCCGCCCCCGTCGAGAAGAAGAAATTGATGAGGAGAAGTGACATAAGGAACATAGCCATTGTAGCCCATGTTGATCATGGAAAGACAACTCTGGTTGATTCCATGTTGAGGCAAGCAAAGGTGTTTCGTGATAACCAAGTTGTCCAAGAAAGGATAATGGACTCCAATGATATAGAGCGTGAAAGGGGGATTACAATTTTGAGTAAAAACACATCTATTACGTATAAAGACTCGAAAATTAATATCATTGATACTCCTGGCCATTCTGACTTTGGAGGGGAGGTCGAGCGCATCCTCAATATGGTGGAAGGGATTCTTTTAGTGGTAGATTCTGTTGAGGGCCCGATGCCACAGACAAGATTTGTTTTGAAGAAGGCTTTAGAATTCGGACATGCTGTCGTTGTTGTTGTCAATAAAATTGATAGGCCTTCCGCCCGTCCGGATTTTGTGATCAATTCCACTTTTGAACTCTTTATTGAACTAAATGCTACTGATGAACAGTGTGATTTTCAAGCAATATATGCTAGTGGGATTAAAGGAAAGGCGGGCTTATCGGCTGATAATCTGTCAGATGATCTTGGGCCCCTTTTTGAGGCCATAATGAGATGCATCCCTGGACCAGCCATTGAAGATGGTGCACTGCAAATGCTTGCTACAAATATCGAGTACGATGAGCATAAGGGTCGAATAGCTATTGGACGCTTGCATGCTGGGGAACTTCGGAAAGGAATGGATGTGAAGGTATGTACCTCAGACGATTCCTGTCGGTTTGCTAAAGTTAGTGAGCTTTTTGTGTATGAGAAGTTCAATAGGGTTTCAGTAGACAGTGTAAAGGCTGGTGATATATGTGCTGTTTGTGGAATTAATGATATTCAGATTGGTGAGACAATTGCTGATAAGACAGATGGGAGGCCATTACCTGCCATTAGGGTGGAGGAACCAACAGTGAAAATGGCTTTCGCTATAAACACTTCACCATTTGTTGGGCGCGAGGGAAAGTATGTCACCAGTAGGAACTTGCGAGATCGGCTTTCTCGTGAGCTTGAGCGTAACTTGGCAATGAAAGTTGAAGATGGTGAAACAGCAGATACCTTCATTGTTAGTGGACGAGGCACTTTGCATATTACCATATTGATTGAGAACATGCGAAGAGAAGGATTTGAATTTATGGTCGGACCTCCCAAAGTTATTAACAAAAGGGTGAATGACAAGTTGCTGGAACCTTATGAGATTGCCACTGTAGAGGTGCCAGAAGAGCACATGGGTCCAGTCGTTGAACTTCTTGGCAGAAGGCGGGGGCAAATGATTGATATGCAGGGGCTTGGGTCAGAAGGCACAAACCTGATCAAATATAAGATTCCAACTCGTGGCCTTCTTGGTTTACGAAATGCAATTTTAACAGCTTCTCGTGGCACAGCTATTCTGAATACAATATTTGATAGCTATGGACCTTGGGCTGGTGATATGAGTACCCGGGATCTGGGTTCACTGGTTGCCTTTGAGGGTGGAACGAGTACTTCTTATGCCCTTTCTAGTTCACAGGATAGAGGACAGTTGTTTATTGGTCCTGGGGTGGATGTTTATAAAGGTCAGATAGTTGGCATCCATCAGCGGTCTGGGGACTTATCTCTTAACGTATGTAAAAAGAAGGCTGCAACAAACATCCGTTCCAACAAAGAACAATCAGTGATTCTTGATACCCCATTGGATTACAGTCTGGATGACTGCATTGAGTACATTCAAGAGGATGAACTGGTGGAGGTCACTCCATCGAGCATCCGGATGTGCAAAAACCCCAAGTTCTCAAAGAAATCATCAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009536 GO:0009628 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0031647 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0050821 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C GTP_EFTU GTP_EFTU_D2

Protein Analysis

675

Amino Acids

74.32

Weight (kDa)

6.39

Isoelectric Point (pI)

40.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	82 - 273	9.6e-53	Elongation factor Tu GTP binding domain
EF-G_D2	PF22042	285 - 366	5.8e-09	Elongation factor G domain 2
GTP_EFTU_D2	PF03144	296 - 366	1.2e-11	Elongation factor Tu domain 2
EFG_C	PF00679	472 - 558	1.9e-21	Elongation factor G C-terminus
BipA_C	PF21018	563 - 666	1.6e-38	TypA/BipA C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13650 AT5G13650
fragaria_vesca	FvH4_6g23530 FvH4_6g23530 FvH4_6g23530 FvH4_6g23530
malus_domestica	MD07G1028800.v1.1 MD12G1072500.v1.1 MD14G1069900.v1.1
prunus_persica	Prupe.7G064400_v2.0.a1
pyrus_communis	pycom12g06100 pycom12g06110 pycom14g05790
rosa_chinensis	RchiOBHm_Chr3g0481531
rosa_laevigata	RLG00000023388
rosa_multiflora	Rmu_sc0010846.1_g000003 Rmu_sc0040423.1_g000001
rosa_roxburghii	Rroxscaffold_6G00400150 Rroxscaffold_6G00400350
rosa_rugosa	Rorug03G0192500
rosa_samantha	Rh3AG243700 Rh3BG278800 Rh3DG270600
rosa_wichuraiana	Rw3G021770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1788
Acc36I	ACCTGC	1 cut(s)	1132
AccB1I	GGYRCC	1 cut(s)	1450
AccB7I	CCANNNNNTGG	2 cut(s)	1187, 1571
AccBSI	CCGCTC	1 cut(s)	138
AccI	GTMKAC	1 cut(s)	1026
AccII	CGCG	1 cut(s)	1194
AccIII	TCCGGA	2 cut(s)	643, 1983
AciI	CCGC	8 cut(s)	111, 136, 204, 207, 636, 749, 1498, 1816
AclWI	GGATC	1 cut(s)	1689
AcoI	YGGCCR	1 cut(s)	463
AcsI	RAATTY	2 cut(s)	587, 1367
AfaI	GTAC	5 cut(s)	872, 952, 1675, 1720, 1940
AfiI	CCNNNNNNNGG	7 cut(s)	312, 505, 796, 1187, 1571, 1661, 1684
AhdI	GACNNNNNGTC	1 cut(s)	599
AjnI	CCWGG	3 cut(s)	460, 817, 1771
AjuI	GAANNNNNNNTTGG	2 cut(s)	65, 97
AluBI	AGCT	8 cut(s)	18, 93, 896, 991, 1246, 1607, 1622, 1647
AluI	AGCT	8 cut(s)	18, 93, 896, 991, 1246, 1607, 1622, 1647
Alw21I	GWGCWC	2 cut(s)	844, 1464
Alw26I	GTCTC	1 cut(s)	1082
Alw44I	GTGCAC	1 cut(s)	840
AlwI	GGATC	1 cut(s)	1689
Ama87I	CYCGRG	1 cut(s)	1677
Aor13HI	TCCGGA	2 cut(s)	643, 1983
AoxI	GGCC	7 cut(s)	463, 544, 629, 785, 798, 1115, 1573
ApaI	GGGCCC	2 cut(s)	548, 789
ApaLI	GTGCAC	1 cut(s)	840
ApeKI	GCWGC	2 cut(s)	18, 1856
ApoI	RAATTY	2 cut(s)	587, 1367
AseI	ATTAAT	2 cut(s)	444, 1068
Asp700I	GAANNNNTTC	2 cut(s)	55, 516
AspLEI	GCGC	2 cut(s)	495, 1194
AspS9I	GGNCC	9 cut(s)	544, 545, 785, 786, 821, 1379, 1469, 1652, 1769
AsuC2I	CCSGG	2 cut(s)	1678, 1679
AsuHPI	GGTGA	7 cut(s)	1055, 1097, 1170, 1201, 1292, 1417, 1676
AvaI	CYCGRG	1 cut(s)	1677
AvaII	GGWCC	5 cut(s)	821, 1379, 1469, 1652, 1769
BaeGI	GKGCMC	3 cut(s)	548, 789, 844
BalI	TGGCCA	1 cut(s)	465
BanI	GGYRCC	1 cut(s)	1450
BanII	GRGCYC	2 cut(s)	548, 789
BauI	CACGAG	3 cut(s)	1239, 1569, 1611
Bbv12I	GWGCWC	2 cut(s)	844, 1464
BbvI	GCAGC	2 cut(s)	5, 1843
BccI	CCATC	5 cut(s)	830, 1103, 1271, 1818, 1981
BcgI	CGANNNNNNTGC	2 cut(s)	869, 903
BciT130I	CCWGG	3 cut(s)	462, 819, 1773
BclI	TGATCA	3 cut(s)	277, 654, 1548
BcnI	CCSGG	2 cut(s)	1678, 1679
BcoDI	GTCTC	1 cut(s)	1082
BfaI	CTAG	3 cut(s)	48, 729, 1737
BfmI	CTRYAG	1 cut(s)	1443
BfuAI	ACCTGC	1 cut(s)	1132
BisI	GCNGC	4 cut(s)	19, 204, 207, 1857
BlsI	GCNGC	4 cut(s)	20, 205, 208, 1858
BmcAI	AGTACT	1 cut(s)	1720
Bme1390I	CCNGG	5 cut(s)	462, 819, 1678, 1679, 1773
Bme18I	GGWCC	5 cut(s)	821, 1379, 1469, 1652, 1769
BmeRI	GACNNNNNGTC	1 cut(s)	599
BmeT110I	CYCGRG	1 cut(s)	1677
BmgT120I	GGNCC	9 cut(s)	544, 545, 785, 786, 821, 1379, 1469, 1652, 1769
BmiI	GGNNCC	7 cut(s)	546, 787, 788, 1143, 1425, 1452, 1470
BmrFI	CCNGG	5 cut(s)	462, 819, 1678, 1679, 1773
BmsI	GCATC	6 cut(s)	504, 540, 800, 822, 1815, 1989
BpuEI	CTTGAG	1 cut(s)	1268
BpuMI	CCSGG	2 cut(s)	1678, 1679
BsaAI	YACGTR	1 cut(s)	426
BsaJI	CCNNGG	4 cut(s)	817, 1655, 1677, 1772
BsaWI	WCCGGW	2 cut(s)	643, 1983
BsaXI	ACNNNNNCTCC	6 cut(s)	117, 137, 147, 167, 471, 501
Bsc4I	CCNNNNNNNGG	7 cut(s)	312, 505, 796, 1187, 1571, 1661, 1684
Bse1I	ACTGG	4 cut(s)	1212, 1472, 1698, 1962
Bse3DI	GCAATG	1 cut(s)	1269
BseAI	TCCGGA	2 cut(s)	643, 1983
BseBI	CCWGG	3 cut(s)	462, 819, 1773
BseDI	CCNNGG	4 cut(s)	817, 1655, 1677, 1772
BseLI	CCNNNNNNNGG	7 cut(s)	312, 505, 796, 1187, 1571, 1661, 1684
BseMI	GCAATG	1 cut(s)	1269
BseMII	CTCAG	1 cut(s)	969
BseNI	ACTGG	4 cut(s)	1212, 1472, 1698, 1962
BseRI	GAGGAG	1 cut(s)	250
BseSI	GKGCMC	3 cut(s)	548, 789, 844
BseXI	GCAGC	2 cut(s)	5, 1843
BseYI	CCCAGC	1 cut(s)	914
Bsh1236I	CGCG	1 cut(s)	1194
BshFI	GGCC	7 cut(s)	465, 546, 631, 787, 800, 1117, 1575
BshNI	GGYRCC	1 cut(s)	1450
BsiHKAI	GWGCWC	2 cut(s)	844, 1464
BsiHKCI	CYCGRG	1 cut(s)	1677
BsiSI	CCGG	3 cut(s)	644, 1678, 1984
BslFI	GGGAC	1 cut(s)	1838
BslI	CCNNNNNNNGG	7 cut(s)	312, 505, 796, 1187, 1571, 1661, 1684
BsmAI	GTCTC	1 cut(s)	1082
BsmFI	GGGAC	1 cut(s)	1838
BsnI	GGCC	7 cut(s)	465, 546, 631, 787, 800, 1117, 1575
BsoBI	CYCGRG	1 cut(s)	1677
Bsp120I	GGGCCC	2 cut(s)	544, 785
Bsp1286I	GDGCHC	4 cut(s)	548, 789, 844, 1464
Bsp13I	TCCGGA	2 cut(s)	643, 1983
Bsp143I	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
BspACI	CCGC	8 cut(s)	111, 136, 204, 207, 636, 749, 1498, 1816
BspANI	GGCC	7 cut(s)	465, 546, 631, 787, 800, 1117, 1575
BspCNI	CTCAG	1 cut(s)	968
BspEI	TCCGGA	2 cut(s)	643, 1983
BspFNI	CGCG	1 cut(s)	1194
BspLI	GGNNCC	7 cut(s)	546, 787, 788, 1143, 1425, 1452, 1470
BspMI	ACCTGC	1 cut(s)	1132
BspPI	GGATC	1 cut(s)	1689
BspQI	GCTCTTC	1 cut(s)	1452
BspT107I	GGYRCC	1 cut(s)	1450
BsrBI	CCGCTC	1 cut(s)	138
BsrDI	GCAATG	1 cut(s)	1269
BsrI	ACTGG	4 cut(s)	1212, 1472, 1698, 1962
BssECI	CCNNGG	4 cut(s)	817, 1655, 1677, 1772
BssMI	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
BssSI	CACGAG	3 cut(s)	1239, 1569, 1611
BssT1I	CCWWGG	1 cut(s)	1655
Bst2BI	CACGAG	3 cut(s)	1239, 1569, 1611
Bst2UI	CCWGG	3 cut(s)	462, 819, 1773
Bst4CI	ACNGT	6 cut(s)	705, 1031, 1150, 1444, 1758, 1919
Bst6I	CTCTTC	5 cut(s)	61, 66, 86, 1348, 1452
BstAPI	GCANNNNNTGC	1 cut(s)	725
BstBAI	YACGTR	1 cut(s)	426
BstC8I	GCNNGC	5 cut(s)	318, 751, 855, 908, 912
BstDEI	CTNAG	1 cut(s)	955
BstENI	CCTNNNNNAGG	1 cut(s)	794
BstFNI	CGCG	1 cut(s)	1194
BstHHI	GCGC	2 cut(s)	495, 1194
BstKTI	GATC	6 cut(s)	280, 657, 781, 1231, 1551, 1684
BstMAI	GTCTC	1 cut(s)	1082
BstMBI	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
BstMWI	GCNNNNNNNGC	5 cut(s)	200, 266, 725, 1231, 1459
BstNI	CCWGG	3 cut(s)	462, 819, 1773
BstNSI	RCATGY	3 cut(s)	599, 914, 1351
BstSCI	CCNGG	5 cut(s)	460, 817, 1676, 1677, 1771
BstSFI	CTRYAG	1 cut(s)	1443
BstSLI	GKGCMC	3 cut(s)	548, 789, 844
BstSNI	TACGTA	1 cut(s)	426
BstUI	CGCG	1 cut(s)	1194
BstV1I	GCAGC	2 cut(s)	5, 1843
BstX2I	RGATCY	1 cut(s)	1681
BstXI	CCANNNNNNTGG	1 cut(s)	1135
BstYI	RGATCY	1 cut(s)	1681
BsuRI	GGCC	7 cut(s)	465, 546, 631, 787, 800, 1117, 1575
BtsI	GCAGTG	1 cut(s)	842
BtsIMutI	CAGTG	7 cut(s)	710, 842, 1036, 1155, 1440, 1691, 1896
BveI	ACCTGC	1 cut(s)	1132
Cac8I	GCNNGC	5 cut(s)	318, 751, 855, 908, 912
CfoI	GCGC	2 cut(s)	495, 1194
Cfr13I	GGNCC	9 cut(s)	544, 545, 785, 786, 821, 1379, 1469, 1652, 1769
Cfr9I	CCCGGG	1 cut(s)	1677
CseI	GACGC	1 cut(s)	912
Csp6I	GTAC	5 cut(s)	871, 951, 1674, 1719, 1939
CviAII	CATG	7 cut(s)	272, 281, 307, 596, 911, 1348, 1465
CviQI	GTAC	5 cut(s)	871, 951, 1674, 1719, 1939
DdeI	CTNAG	1 cut(s)	955
DpnI	GATC	6 cut(s)	279, 656, 780, 1230, 1550, 1683
DpnII	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
DriI	GACNNNNNGTC	1 cut(s)	599
EaeI	YGGCCR	1 cut(s)	463
Eam1104I	CTCTTC	5 cut(s)	61, 66, 86, 1348, 1452
Eam1105I	GACNNNNNGTC	1 cut(s)	599
EarI	CTCTTC	5 cut(s)	61, 66, 86, 1348, 1452
EciI	GGCGGA	1 cut(s)	625
Eco105I	TACGTA	1 cut(s)	426
Eco130I	CCWWGG	1 cut(s)	1655
Eco147I	AGGCCT	1 cut(s)	631
Eco24I	GRGCYC	2 cut(s)	548, 789
Eco47I	GGWCC	5 cut(s)	821, 1379, 1469, 1652, 1769
Eco88I	CYCGRG	1 cut(s)	1677
EcoNI	CCTNNNNNAGG	1 cut(s)	794
EcoO109I	RGGNCCY	2 cut(s)	544, 786
EcoRI	GAATTC	1 cut(s)	587
EcoRII	CCWGG	3 cut(s)	460, 817, 1771
EcoT14I	CCWWGG	1 cut(s)	1655
EcoT22I	ATGCAT	1 cut(s)	815
EcoT38I	GRGCYC	2 cut(s)	548, 789
ErhI	CCWWGG	1 cut(s)	1655
FaeI	CATG	7 cut(s)	275, 284, 310, 599, 914, 1351, 1468
FalI	AAGNNNNNCTT	6 cut(s)	65, 97, 504, 536, 737, 769
FaqI	GGGAC	1 cut(s)	1838
FatI	CATG	7 cut(s)	271, 280, 306, 595, 910, 1347, 1464
FauI	CCCGC	2 cut(s)	742, 1491
FbaI	TGATCA	3 cut(s)	277, 654, 1548
FblI	GTMKAC	1 cut(s)	1026
Fnu4HI	GCNGC	4 cut(s)	19, 204, 207, 1857
FriOI	GRGCYC	2 cut(s)	548, 789
Fsp4HI	GCNGC	4 cut(s)	19, 204, 207, 1857
FspBI	CTAG	3 cut(s)	48, 729, 1737
GlaI	GCGC	2 cut(s)	494, 1193
GluI	GCNGC	4 cut(s)	19, 204, 207, 1857
GsaI	CCCAGC	1 cut(s)	918
HaeIII	GGCC	7 cut(s)	465, 546, 631, 787, 800, 1117, 1575
HapII	CCGG	3 cut(s)	644, 1678, 1984
HgaI	GACGC	1 cut(s)	912
HhaI	GCGC	2 cut(s)	495, 1194
Hin1II	CATG	7 cut(s)	275, 284, 310, 599, 914, 1351, 1468
Hin6I	GCGC	2 cut(s)	493, 1192
HinP1I	GCGC	2 cut(s)	493, 1192
HinfI	GANTC	8 cut(s)	302, 365, 434, 517, 533, 962, 1561, 1894
HpaII	CCGG	3 cut(s)	644, 1678, 1984
HphI	GGTGA	7 cut(s)	1055, 1097, 1170, 1201, 1292, 1417, 1676
Hpy166II	GTNNAC	6 cut(s)	842, 1027, 1310, 1586, 1691, 1742
Hpy188III	TCNNGA	9 cut(s)	141, 217, 332, 644, 1241, 1898, 1922, 1946, 1984
Hpy8I	GTNNAC	6 cut(s)	842, 1027, 1310, 1586, 1691, 1742
Hpy99I	CGWCG	1 cut(s)	218
HpyCH4III	ACNGT	6 cut(s)	705, 1031, 1150, 1444, 1758, 1919
HpyCH4IV	ACGT	2 cut(s)	425, 1839
HpyF10VI	GCNNNNNNNGC	5 cut(s)	200, 266, 725, 1231, 1459
HpyF3I	CTNAG	1 cut(s)	955
HpySE526I	ACGT	2 cut(s)	425, 1839
Hsp92II	CATG	7 cut(s)	275, 284, 310, 599, 914, 1351, 1468
HspAI	GCGC	2 cut(s)	493, 1192
Kpn2I	TCCGGA	2 cut(s)	643, 1983
Ksp22I	TGATCA	3 cut(s)	277, 654, 1548
Kzo9I	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
LguI	GCTCTTC	1 cut(s)	1452
LmnI	GCTCC	3 cut(s)	26, 143, 185
Lsp1109I	GCAGC	2 cut(s)	5, 1843
LweI	GCATC	6 cut(s)	504, 540, 800, 822, 1815, 1989
MaeI	CTAG	3 cut(s)	48, 729, 1737
MaeII	ACGT	2 cut(s)	425, 1839
MaeIII	GTNAC	4 cut(s)	242, 1207, 1253, 1966
MalI	GATC	6 cut(s)	279, 656, 780, 1230, 1550, 1683
MbiI	CCGCTC	1 cut(s)	138
MboI	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
MfeI	CAATTG	1 cut(s)	1092
MflI	RGATCY	1 cut(s)	1681
MhlI	GDGCHC	4 cut(s)	548, 789, 844, 1464
MlsI	TGGCCA	1 cut(s)	465
MluNI	TGGCCA	1 cut(s)	465
MlyI	GAGTC	2 cut(s)	359, 428
MmeI	TCCRAC	4 cut(s)	188, 1357, 1589, 1899
Mox20I	TGGCCA	1 cut(s)	465
Mph1103I	ATGCAT	1 cut(s)	815
MroI	TCCGGA	2 cut(s)	643, 1983
MroXI	GAANNNNTTC	2 cut(s)	55, 516
MscI	TGGCCA	1 cut(s)	465
MseI	TTAA	6 cut(s)	444, 738, 1068, 1395, 1601, 1836
MslI	CAYNNNNRTG	2 cut(s)	1133, 1985
Msp20I	TGGCCA	1 cut(s)	465
MspA1I	CMGCKG	2 cut(s)	18, 1816
MspI	CCGG	3 cut(s)	644, 1678, 1984
MspR9I	CCNGG	5 cut(s)	462, 819, 1678, 1679, 1773
MunI	CAATTG	1 cut(s)	1092
MvaI	CCWGG	3 cut(s)	462, 819, 1773
MvnI	CGCG	1 cut(s)	1194
MwoI	GCNNNNNNNGC	5 cut(s)	200, 266, 725, 1231, 1459
NciI	CCSGG	2 cut(s)	1678, 1679
NdeII	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
NlaIII	CATG	7 cut(s)	275, 284, 310, 599, 914, 1351, 1468
NlaIV	GGNNCC	7 cut(s)	546, 787, 788, 1143, 1425, 1452, 1470
NmuCI	GTSAC	3 cut(s)	242, 1207, 1966
NsiI	ATGCAT	1 cut(s)	815
NspI	RCATGY	3 cut(s)	599, 914, 1351
PaeI	GCATGC	1 cut(s)	914
PceI	AGGCCT	1 cut(s)	631
PciSI	GCTCTTC	1 cut(s)	1452
PcsI	WCGNNNNNNNCGW	1 cut(s)	1237
PdmI	GAANNNNTTC	2 cut(s)	55, 516
PfeI	GAWTC	6 cut(s)	302, 517, 533, 962, 1561, 1894
PflMI	CCANNNNNTGG	2 cut(s)	1187, 1571
PkrI	GCNGC	4 cut(s)	20, 205, 208, 1858
PleI	GAGTC	2 cut(s)	359, 428
PpsI	GAGTC	2 cut(s)	359, 428
Ppu21I	YACGTR	1 cut(s)	426
PshBI	ATTAAT	2 cut(s)	444, 1068
PsiI	TTATAA	1 cut(s)	1788
Psp6I	CCWGG	3 cut(s)	460, 817, 1771
PspFI	CCCAGC	1 cut(s)	914
PspGI	CCWGG	3 cut(s)	460, 817, 1771
PspN4I	GGNNCC	7 cut(s)	546, 787, 788, 1143, 1425, 1452, 1470
PspOMI	GGGCCC	2 cut(s)	544, 785
PspPI	GGNCC	9 cut(s)	544, 545, 785, 786, 821, 1379, 1469, 1652, 1769
PsrI	GAACNNNNNNTAC	2 cut(s)	992, 1024
PsuI	RGATCY	1 cut(s)	1681
PvuII	CAGCTG	1 cut(s)	18
RsaI	GTAC	5 cut(s)	872, 952, 1675, 1720, 1940
RsaNI	GTAC	5 cut(s)	871, 951, 1674, 1719, 1939
RseI	CAYNNNNRTG	2 cut(s)	1133, 1985
SapI	GCTCTTC	1 cut(s)	1452
SaqAI	TTAA	6 cut(s)	444, 738, 1068, 1395, 1601, 1836
SatI	GCNGC	4 cut(s)	19, 204, 207, 1857
Sau3AI	GATC	6 cut(s)	277, 654, 778, 1228, 1548, 1681
Sau96I	GGNCC	9 cut(s)	544, 545, 785, 786, 821, 1379, 1469, 1652, 1769
ScaI	AGTACT	1 cut(s)	1720
SchI	GAGTC	2 cut(s)	359, 428
ScrFI	CCNGG	5 cut(s)	462, 819, 1678, 1679, 1773
SduI	GDGCHC	4 cut(s)	548, 789, 844, 1464
SfaNI	GCATC	6 cut(s)	504, 540, 800, 822, 1815, 1989
SfcI	CTRYAG	1 cut(s)	1443
SinI	GGWCC	5 cut(s)	821, 1379, 1469, 1652, 1769
SmaI	CCCGGG	1 cut(s)	1679
SmiMI	CAYNNNNRTG	2 cut(s)	1133, 1985
SmlI	CTYRAG	1 cut(s)	1247
SmoI	CTYRAG	1 cut(s)	1247
SnaBI	TACGTA	1 cut(s)	426
SphI	GCATGC	1 cut(s)	914
SseBI	AGGCCT	1 cut(s)	631
SsiI	CCGC	8 cut(s)	111, 136, 204, 207, 636, 749, 1498, 1816
SspI	AATATT	1 cut(s)	1638
SspMI	CTAG	3 cut(s)	48, 729, 1737
StuI	AGGCCT	1 cut(s)	631
StyD4I	CCNGG	5 cut(s)	460, 817, 1676, 1677, 1771
StyI	CCWWGG	1 cut(s)	1655
TaaI	ACNGT	6 cut(s)	705, 1031, 1150, 1444, 1758, 1919
TaiI	ACGT	2 cut(s)	428, 1842
TaqI	TCGA	6 cut(s)	216, 437, 489, 867, 889, 1976
TatI	WGTACW	2 cut(s)	1718, 1938
TauI	GCSGC	2 cut(s)	206, 209
TfiI	GAWTC	6 cut(s)	302, 517, 533, 962, 1561, 1894
Tru1I	TTAA	6 cut(s)	444, 738, 1068, 1395, 1601, 1836
Tru9I	TTAA	6 cut(s)	444, 738, 1068, 1395, 1601, 1836
TscAI	CASTG	7 cut(s)	710, 849, 1036, 1155, 1447, 1698, 1896
TseFI	GTSAC	3 cut(s)	242, 1207, 1966
TseI	GCWGC	2 cut(s)	18, 1856
Tsp45I	GTSAC	3 cut(s)	242, 1207, 1966
TspDTI	ATGAA	4 cut(s)	714, 1280, 1288, 1968
TspGWI	ACGGA	2 cut(s)	172, 1859
TspMI	CCCGGG	1 cut(s)	1677
TspRI	CASTG	7 cut(s)	710, 849, 1036, 1155, 1447, 1698, 1896
Van91I	CCANNNNNTGG	2 cut(s)	1187, 1571
VneI	GTGCAC	1 cut(s)	840
VpaK11BI	GGWCC	5 cut(s)	821, 1379, 1469, 1652, 1769
VspI	ATTAAT	2 cut(s)	444, 1068
XagI	CCTNNNNNAGG	1 cut(s)	794
XapI	RAATTY	2 cut(s)	587, 1367
XceI	RCATGY	3 cut(s)	599, 914, 1351
XcmI	CCANNNNNNNNNTGG	3 cut(s)	278, 473, 1817
XmaI	CCCGGG	1 cut(s)	1677
XmiI	GTMKAC	1 cut(s)	1026
XmnI	GAANNNNTTC	2 cut(s)	55, 516
XspI	CTAG	3 cut(s)	48, 729, 1737
ZrmI	AGTACT	1 cut(s)	1720
Zsp2I	ATGCAT	1 cut(s)	815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.