Rorug03G0192500

Calcium-dependent protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
16952881 .. 16956455
3575 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0192500.1

Sequence Viewer

Length: 1329 bp
ATGACAAACACAACAATGGGCGGTGTCTCAGAGTCTGAAATGATGTCCCACTGCAAAGAGGAATTGCCATTGCAGTCTGACCAACATGCCAAGAACAACCAACTATTCACGTCCTTAGGAAGACAATCTTCCATCTACTCTCTCACTCTCGACGAGTTCCAGCACACCCTCTCTGAGAACGGCAAGAATTTCGGGTCTATGAACATGGACGAGTTCCTCAACAGCATTTGGACTGCTGAAGAAAATCAAGCCATCAACTCCACCCACCACAACAACAGTAATAACCTCAATCCCAACCACATCAACAACATAAGCAACAACAATGTCCAGCACCCCGCTTTAAGCGAGGTCACTATTGAAAAAAAAGGTGTGATAGCCAAGCAACCAAGCTTGGCACGTCAGGGTTCACTCACGTTTCCTGCACCATTGTGCAGGAAGACGGTGGACGAAGTTTGGTCTGAAATACACAAAGAGCAGAAAGCACAAGCTCAGCAACAGAACAGTAACCACAACAGTAGCAATGATGGTGCTCAGAATTCCGAGTATGTTCCTCGCCAGCCCACATTTGGGGAGATGACACTGGAGGATTTTTTAGTAAAAGCAGGGGTCGTTCGGGAACCAGATTCAATGTCAGTGGTGCCCCTCCCTCCTCAACCCCAACAGCAACCACAGCAGTATGGCATAGTGGGACAAAGTTTTGTGATGGGAATGGGTGCAAATGCTGGTGCTAGCACTAGTACTACTCCTGTTCTGCCCAATTACCAAACTATCCCTCAAGGTGGCACCCCGGTCGGAGAGTCATCTGGGTATGTTACAAATGGCAAGAGGAATGGGGCATATCCCCCACCACCGCCACAGGCAGTTTGTTTTGGAGGGAGAGTGATCAATGGTGGCGGTGGTTATGCCCCGACGCAGCCAATCGGGACGGCTACTCCTGTGAGTCCAGTGTCATCAGATGGGATGTGTGCGAGTCAGATTGAGAACTCAGGCGGTCAATATGCTATGGATATGGGTGCACTGAGGGGAAGAAAGAGGATTATAGATGGTCCAGTGGAGAAGGTGGTGGAGAGGAGGCAGAGAAGGATGATTAAGAATAGAGAGTCTGCTGCAAGGTCTAGAGCCAGGAAACAGGCATATACTGTTGAATTGGAGGCAGAACTTAACCAATTAAGAGAAGAGAATGCAAACCTTAAACAGGCACTGGCTGAGCTGGAGATGAAACGAAGGCAACAGTACTGTGAGGAAATGAGAAAAAGAGTTCAGAGCAGGGCCCAGAAAGCTATGGAGAAGCTGTGGATGCTGAAGAGGAGTCACAGTTGTGCTGTGTGA

Protein Analysis

442

Amino Acids

48.71

Weight (kDa)

8.43

Isoelectric Point (pI)

60.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_2 PF07716 356 - 406 7.8e-10 Basic region leucine zipper
bZIP_1 PF00170 357 - 405 4.9e-12 bZIP transcription factor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000452)

Species Orthologous Gene IDs
rosa_rugosa Rorug01G0066100 Rorug01G0066100 Rorug01G0069900 Rorug01G0089700 Rorug01G0090100 Rorug01G0097600 Rorug01G0099600 Rorug01G0101900 Rorug01G0102400 Rorug01G0118300 Rorug01G0124800 Rorug01G0169500 Rorug01G0238100 Rorug01G0451600 Rorug02G0188700 Rorug02G0229300 Rorug02G0253000 Rorug02G0256200 Rorug02G0258900 Rorug02G0339200 Rorug02G0392100 Rorug02G0491500 Rorug03G0141200 Rorug03G0192500 Rorug03G0200300 Rorug03G0218600 Rorug03G0269500 Rorug03G0269700 Rorug03G0272400 Rorug03G0276400 Rorug03G0283800 Rorug03G0334100 Rorug03G0356200 Rorug04G0002200 Rorug04G0008300 Rorug04G0031200 Rorug04G0040800 Rorug04G0063000 Rorug04G0069500.1 Rorug04G0070200 Rorug04G0114400 Rorug04G0181100 Rorug04G0205700 Rorug05G0004000 Rorug05G0018000 Rorug05G0018100 Rorug05G0090500 Rorug05G0108800 Rorug05G0118900 Rorug05G0202300 Rorug05G0214200 Rorug05G0243800 Rorug05G0243900 Rorug05G0266300 Rorug05G0272500 Rorug05G0276400 Rorug05G0291500 Rorug05G0293800 Rorug05G0350400 Rorug05G0360900 Rorug05G0369500 Rorug05G0370100 Rorug05G0370500 Rorug05G0407800 Rorug05G0418900 Rorug05G0524200 Rorug05G0526800 Rorug05G0547200 Rorug06G0004100 Rorug06G0015000 Rorug06G0027300 Rorug06G0048200 Rorug06G0059100 Rorug06G0066200 Rorug06G0128100 Rorug06G0363800.1 Rorug07G0031500 Rorug07G0184700 Rorug07G0185600 Rorug07G0189600 Rorug07G0196500 Rorug07G0200700 Rorug07G0219700 Rorug07G0219900 Rorug07G0219900 Rorug07G0223000 Rorug07G0223000 Rorug07G0230800 Rorug07G0243500 Rorug07G0244700 Rorug07G0245700 Rorug07G0279800 Rorug07G0305800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 637, 782
AciI CCGC 5 cut(s) 21, 336, 851, 894, 990
AcsI RAATTY 2 cut(s) 187, 535
AcuI CTGAAG 2 cut(s) 258, 1322
AfaI GTAC 2 cut(s) 739, 1235
AfiI CCNNNNNNNGG 4 cut(s) 566, 567, 779, 1195
AgsI TTSAA 3 cut(s) 359, 627, 1145
AhlI ACTAGT 1 cut(s) 734
AjiI CACGTC 2 cut(s) 111, 398
AjnI CCWGG 1 cut(s) 1121
AleI CACNNNNGTG 2 cut(s) 427, 1317
AluBI AGCT 5 cut(s) 390, 488, 1210, 1280, 1291
AluI AGCT 5 cut(s) 390, 488, 1210, 1280, 1291
Alw21I GWGCWC 2 cut(s) 532, 1018
Alw26I GTCTC 1 cut(s) 31
Alw44I GTGCAC 1 cut(s) 1014
AlwNI CAGNNNCTG 2 cut(s) 35, 1201
AoxI GGCC 1 cut(s) 1269
ApaI GGGCCC 1 cut(s) 1273
ApaLI GTGCAC 1 cut(s) 1014
ApeKI GCWGC 2 cut(s) 913, 1106
ApoI RAATTY 2 cut(s) 187, 535
AspS9I GGNCC 3 cut(s) 1046, 1269, 1270
AsuC2I CCSGG 1 cut(s) 788
AsuNHI GCTAGC 1 cut(s) 728
AvaII GGWCC 1 cut(s) 1046
AxyI CCTNAGG 1 cut(s) 115
BaeGI GKGCMC 3 cut(s) 642, 1018, 1273
BanI GGYRCC 2 cut(s) 637, 782
BanII GRGCYC 1 cut(s) 1273
BbsI GAAGAC 2 cut(s) 127, 443
Bbv12I GWGCWC 2 cut(s) 532, 1018
BbvI GCAGC 2 cut(s) 925, 1093
BccI CCATC 6 cut(s) 140, 260, 518, 697, 950, 1037
BceAI ACGGC 2 cut(s) 196, 942
BcgI CGANNNNNNTGC 4 cut(s) 172, 206, 772, 806
BciT130I CCWGG 1 cut(s) 1123
BclI TGATCA 1 cut(s) 882
BcnI CCSGG 1 cut(s) 788
BcoDI GTCTC 1 cut(s) 31
BcuI ACTAGT 1 cut(s) 734
BfaI CTAG 3 cut(s) 729, 735, 1116
BisI GCNGC 2 cut(s) 914, 1107
BlpI GCTNAGC 2 cut(s) 489, 1206
BlsI GCNGC 2 cut(s) 915, 1108
BmcAI AGTACT 2 cut(s) 739, 1235
Bme1390I CCNGG 2 cut(s) 788, 1123
Bme18I GGWCC 1 cut(s) 1046
BmgBI CACGTC 2 cut(s) 111, 398
BmgT120I GGNCC 3 cut(s) 1046, 1269, 1270
BmiI GGNNCC 4 cut(s) 618, 639, 784, 1271
BmrFI CCNGG 2 cut(s) 788, 1123
BmsI GCATC 1 cut(s) 1287
BmtI GCTAGC 1 cut(s) 732
BpiI GAAGAC 2 cut(s) 127, 443
BpmI CTGGAG 2 cut(s) 602, 1232
Bpu1102I GCTNAGC 2 cut(s) 489, 1206
BpuEI CTTGAG 1 cut(s) 759
BpuMI CCSGG 1 cut(s) 788
BsaJI CCNNGG 1 cut(s) 786
BsaXI ACNNNNNCTCC 7 cut(s) 864, 894, 916, 946, 1277, 1300, 1307
Bsc4I CCNNNNNNNGG 4 cut(s) 566, 567, 779, 1195
Bse1I ACTGG 4 cut(s) 585, 944, 1049, 1206
Bse21I CCTNAGG 1 cut(s) 115
Bse3DI GCAATG 2 cut(s) 68, 526
BseBI CCWGG 1 cut(s) 1123
BseDI CCNNGG 1 cut(s) 786
BseGI GGATG 3 cut(s) 966, 1089, 1302
BseLI CCNNNNNNNGG 4 cut(s) 566, 567, 779, 1195
BseMI GCAATG 2 cut(s) 68, 526
BseMII CTCAG 7 cut(s) 42, 165, 503, 545, 999, 1010, 1197
BseNI ACTGG 4 cut(s) 585, 944, 1049, 1206
BseRI GAGGAG 3 cut(s) 639, 1084, 1321
BseSI GKGCMC 3 cut(s) 642, 1018, 1273
BseXI GCAGC 2 cut(s) 925, 1093
BsgI GTGCAG 2 cut(s) 405, 451
Bsh1285I CGRYCG 1 cut(s) 792
BshFI GGCC 1 cut(s) 1271
BshNI GGYRCC 2 cut(s) 637, 782
BsiEI CGRYCG 1 cut(s) 792
BsiHKAI GWGCWC 2 cut(s) 532, 1018
BsiSI CCGG 1 cut(s) 788
BslFI GGGAC 3 cut(s) 31, 702, 937
BslI CCNNNNNNNGG 4 cut(s) 566, 567, 779, 1195
BsmAI GTCTC 1 cut(s) 31
BsmFI GGGAC 3 cut(s) 31, 702, 937
BsmI GAATGC 1 cut(s) 1186
BsnI GGCC 1 cut(s) 1271
Bsp120I GGGCCC 1 cut(s) 1269
Bsp1286I GDGCHC 4 cut(s) 532, 642, 1018, 1273
Bsp143I GATC 1 cut(s) 882
Bsp1720I GCTNAGC 2 cut(s) 489, 1206
BspACI CCGC 5 cut(s) 21, 336, 851, 894, 990
BspANI GGCC 1 cut(s) 1271
BspCNI CTCAG 7 cut(s) 41, 166, 502, 544, 998, 1011, 1198
BspLI GGNNCC 4 cut(s) 618, 639, 784, 1271
BspOI GCTAGC 1 cut(s) 732
BspT107I GGYRCC 2 cut(s) 637, 782
BsrDI GCAATG 2 cut(s) 68, 526
BsrI ACTGG 4 cut(s) 585, 944, 1049, 1206
BssECI CCNNGG 1 cut(s) 786
BssMI GATC 1 cut(s) 882
Bst2UI CCWGG 1 cut(s) 1123
Bst4CI ACNGT 8 cut(s) 278, 442, 503, 515, 1141, 1233, 1238, 1316
Bst6I CTCTTC 2 cut(s) 1170, 1298
BstC8I GCNNGC 2 cut(s) 557, 730
BstDEI CTNAG 8 cut(s) 28, 115, 174, 489, 531, 985, 1019, 1206
BstENI CCTNNNNNAGG 1 cut(s) 1193
BstF5I GGATG 3 cut(s) 966, 1089, 1302
BstKTI GATC 1 cut(s) 885
BstMAI GTCTC 1 cut(s) 31
BstMBI GATC 1 cut(s) 882
BstMCI CGRYCG 1 cut(s) 792
BstMWI GCNNNNNNNGC 3 cut(s) 670, 1277, 1297
BstNI CCWGG 1 cut(s) 1123
BstNSI RCATGY 1 cut(s) 89
BstSCI CCNGG 2 cut(s) 786, 1121
BstSLI GKGCMC 3 cut(s) 642, 1018, 1273
BstV1I GCAGC 2 cut(s) 925, 1093
BstV2I GAAGAC 2 cut(s) 127, 443
Bsu36I CCTNAGG 1 cut(s) 115
BsuRI GGCC 1 cut(s) 1271
BtrI CACGTC 2 cut(s) 111, 398
BtsCI GGATG 3 cut(s) 966, 1089, 1302
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 7 cut(s) 49, 578, 639, 951, 1016, 1056, 1199
Cac8I GCNNGC 2 cut(s) 557, 730
CaiI CAGNNNCTG 2 cut(s) 35, 1201
Cfr13I GGNCC 3 cut(s) 1046, 1269, 1270
CseI GACGC 1 cut(s) 919
Csp6I GTAC 2 cut(s) 738, 1234
CspCI CAANNNNNGTGG 2 cut(s) 615, 650
CviAII CATG 2 cut(s) 86, 205
CviQI GTAC 2 cut(s) 738, 1234
DdeI CTNAG 8 cut(s) 28, 115, 174, 489, 531, 985, 1019, 1206
DpnI GATC 1 cut(s) 884
DpnII GATC 1 cut(s) 882
Eam1104I CTCTTC 2 cut(s) 1170, 1298
EarI CTCTTC 2 cut(s) 1170, 1298
Eco24I GRGCYC 1 cut(s) 1273
Eco47I GGWCC 1 cut(s) 1046
Eco57I CTGAAG 2 cut(s) 258, 1322
Eco81I CCTNAGG 1 cut(s) 115
EcoNI CCTNNNNNAGG 1 cut(s) 1193
EcoO109I RGGNCCY 1 cut(s) 1269
EcoRI GAATTC 1 cut(s) 535
EcoRII CCWGG 1 cut(s) 1121
EcoT38I GRGCYC 1 cut(s) 1273
FaeI CATG 2 cut(s) 89, 208
FalI AAGNNNNNCTT 2 cut(s) 112, 144
FaqI GGGAC 3 cut(s) 31, 702, 937
FatI CATG 2 cut(s) 85, 204
FauI CCCGC 1 cut(s) 343
FbaI TGATCA 1 cut(s) 882
Fnu4HI GCNGC 2 cut(s) 914, 1107
FokI GGATG 3 cut(s) 973, 1096, 1309
FriOI GRGCYC 1 cut(s) 1273
Fsp4HI GCNGC 2 cut(s) 914, 1107
FspBI CTAG 3 cut(s) 729, 735, 1116
GluI GCNGC 2 cut(s) 914, 1107
GsuI CTGGAG 2 cut(s) 602, 1232
HaeIII GGCC 1 cut(s) 1271
HapII CCGG 1 cut(s) 788
HgaI GACGC 1 cut(s) 919
Hin1II CATG 2 cut(s) 89, 208
HindIII AAGCTT 1 cut(s) 388
HinfI GANTC 7 cut(s) 32, 623, 797, 940, 970, 1100, 1309
HpaII CCGG 1 cut(s) 788
Hpy166II GTNNAC 3 cut(s) 407, 445, 1016
Hpy188III TCNNGA 4 cut(s) 149, 614, 922, 1116
Hpy8I GTNNAC 3 cut(s) 407, 445, 1016
Hpy99I CGWCG 2 cut(s) 155, 913
HpyAV CCTTC 3 cut(s) 1051, 1074, 1218
HpyCH4III ACNGT 8 cut(s) 278, 442, 503, 515, 1141, 1233, 1238, 1316
HpyCH4IV ACGT 3 cut(s) 110, 397, 413
HpyCH4V TGCA 8 cut(s) 54, 73, 422, 432, 716, 1016, 1109, 1184
HpyF10VI GCNNNNNNNGC 3 cut(s) 670, 1277, 1297
HpyF3I CTNAG 8 cut(s) 28, 115, 174, 489, 531, 985, 1019, 1206
HpySE526I ACGT 3 cut(s) 110, 397, 413
Hsp92II CATG 2 cut(s) 89, 208
Ksp22I TGATCA 1 cut(s) 882
Kzo9I GATC 1 cut(s) 882
Lsp1109I GCAGC 2 cut(s) 925, 1093
LweI GCATC 1 cut(s) 1287
MaeI CTAG 3 cut(s) 729, 735, 1116
MaeII ACGT 3 cut(s) 110, 397, 413
MaeIII GTNAC 4 cut(s) 349, 503, 811, 1310
MalI GATC 1 cut(s) 884
MboI GATC 1 cut(s) 882
MboII GAAGA 7 cut(s) 120, 132, 251, 448, 1038, 1187, 1315
MhlI GDGCHC 4 cut(s) 532, 642, 1018, 1273
MluCI AATT 6 cut(s) 62, 187, 535, 757, 1145, 1166
MlyI GAGTC 6 cut(s) 41, 806, 949, 979, 1109, 1318
MmeI TCCRAC 1 cut(s) 772
MseI TTAA 5 cut(s) 341, 1089, 1161, 1169, 1191
MslI CAYNNNNRTG 3 cut(s) 14, 427, 1317
MspI CCGG 1 cut(s) 788
MspR9I CCNGG 2 cut(s) 788, 1123
Mva1269I GAATGC 1 cut(s) 1186
MvaI CCWGG 1 cut(s) 1123
MwoI GCNNNNNNNGC 3 cut(s) 670, 1277, 1297
NciI CCSGG 1 cut(s) 788
NdeII GATC 1 cut(s) 882
NheI GCTAGC 1 cut(s) 728
NlaIII CATG 2 cut(s) 89, 208
NlaIV GGNNCC 4 cut(s) 618, 639, 784, 1271
NmuCI GTSAC 2 cut(s) 349, 1310
NspI RCATGY 1 cut(s) 89
OliI CACNNNNGTG 2 cut(s) 427, 1317
PctI GAATGC 1 cut(s) 1186
PfeI GAWTC 1 cut(s) 623
PkrI GCNGC 2 cut(s) 915, 1108
PleI GAGTC 6 cut(s) 40, 805, 948, 978, 1108, 1317
PpsI GAGTC 6 cut(s) 40, 805, 948, 978, 1108, 1317
Psp6I CCWGG 1 cut(s) 1121
PspGI CCWGG 1 cut(s) 1121
PspN4I GGNNCC 4 cut(s) 618, 639, 784, 1271
PspOMI GGGCCC 1 cut(s) 1269
PspPI GGNCC 3 cut(s) 1046, 1269, 1270
PstNI CAGNNNCTG 2 cut(s) 35, 1201
RsaI GTAC 2 cut(s) 739, 1235
RsaNI GTAC 2 cut(s) 738, 1234
RseI CAYNNNNRTG 3 cut(s) 14, 427, 1317
SaqAI TTAA 5 cut(s) 341, 1089, 1161, 1169, 1191
SatI GCNGC 2 cut(s) 914, 1107
Sau3AI GATC 1 cut(s) 882
Sau96I GGNCC 3 cut(s) 1046, 1269, 1270
ScaI AGTACT 2 cut(s) 739, 1235
SchI GAGTC 6 cut(s) 41, 806, 949, 979, 1109, 1318
ScrFI CCNGG 2 cut(s) 788, 1123
SduI GDGCHC 4 cut(s) 532, 642, 1018, 1273
SfaNI GCATC 1 cut(s) 1287
SinI GGWCC 1 cut(s) 1046
SmiMI CAYNNNNRTG 3 cut(s) 14, 427, 1317
SmlI CTYRAG 1 cut(s) 774
SmoI CTYRAG 1 cut(s) 774
SpeI ACTAGT 1 cut(s) 734
Sse9I AATT 6 cut(s) 62, 187, 535, 757, 1145, 1166
SsiI CCGC 5 cut(s) 21, 336, 851, 894, 990
SspMI CTAG 3 cut(s) 729, 735, 1116
StyD4I CCNGG 2 cut(s) 786, 1121
TaaI ACNGT 8 cut(s) 278, 442, 503, 515, 1141, 1233, 1238, 1316
TaiI ACGT 3 cut(s) 113, 400, 416
TaqI TCGA 1 cut(s) 150
TasI AATT 6 cut(s) 62, 187, 535, 757, 1145, 1166
TatI WGTACW 2 cut(s) 737, 1233
TfiI GAWTC 1 cut(s) 623
Tru1I TTAA 5 cut(s) 341, 1089, 1161, 1169, 1191
Tru9I TTAA 5 cut(s) 341, 1089, 1161, 1169, 1191
TscAI CASTG 7 cut(s) 56, 585, 639, 951, 1023, 1056, 1206
TseFI GTSAC 2 cut(s) 349, 1310
TseI GCWGC 2 cut(s) 913, 1106
Tsp45I GTSAC 2 cut(s) 349, 1310
TspDTI ATGAA 2 cut(s) 215, 1232
TspRI CASTG 7 cut(s) 56, 585, 639, 951, 1023, 1056, 1206
VneI GTGCAC 1 cut(s) 1014
VpaK11BI GGWCC 1 cut(s) 1046
XagI CCTNNNNNAGG 1 cut(s) 1193
XapI RAATTY 2 cut(s) 187, 535
XbaI TCTAGA 1 cut(s) 1115
XceI RCATGY 1 cut(s) 89
XcmI CCANNNNNNNNNTGG 1 cut(s) 563
XspI CTAG 3 cut(s) 729, 735, 1116
ZrmI AGTACT 2 cut(s) 739, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.