Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Tetraspanin | PF00335 | 5 - 251 | 6.4e-32 | Tetraspanin family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 71 |
| AciI | CCGC | 4 cut(s) | 26, 578, 581, 784 |
| AclWI | GGATC | 4 cut(s) | 193, 206, 372, 402 |
| AcoI | YGGCCR | 3 cut(s) | 27, 165, 301 |
| AcuI | CTGAAG | 1 cut(s) | 689 |
| AdeI | CACNNNGTG | 1 cut(s) | 527 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 68, 81 |
| AflII | CTTAAG | 1 cut(s) | 386 |
| AgsI | TTSAA | 2 cut(s) | 442, 631 |
| AleI | CACNNNNGTG | 1 cut(s) | 539 |
| AluBI | AGCT | 3 cut(s) | 407, 417, 622 |
| AluI | AGCT | 3 cut(s) | 407, 417, 622 |
| Alw26I | GTCTC | 1 cut(s) | 220 |
| AlwI | GGATC | 4 cut(s) | 193, 206, 372, 402 |
| AoxI | GGCC | 4 cut(s) | 27, 128, 165, 301 |
| ApeKI | GCWGC | 1 cut(s) | 507 |
| AsuHPI | GGTGA | 1 cut(s) | 277 |
| BalI | TGGCCA | 1 cut(s) | 167 |
| BamHI | GGATCC | 1 cut(s) | 198 |
| BanI | GGYRCC | 1 cut(s) | 71 |
| BanII | GRGCYC | 1 cut(s) | 299 |
| BbsI | GAAGAC | 1 cut(s) | 780 |
| BbvI | GCAGC | 1 cut(s) | 494 |
| BccI | CCATC | 3 cut(s) | 38, 65, 312 |
| BcoDI | GTCTC | 1 cut(s) | 220 |
| BfaI | CTAG | 1 cut(s) | 713 |
| BfrI | CTTAAG | 1 cut(s) | 386 |
| BisI | GCNGC | 3 cut(s) | 27, 508, 579 |
| BlsI | GCNGC | 3 cut(s) | 28, 509, 580 |
| BmiI | GGNNCC | 4 cut(s) | 73, 200, 209, 298 |
| BmsI | GCATC | 2 cut(s) | 408, 494 |
| BpiI | GAAGAC | 1 cut(s) | 780 |
| Bpu10I | CCTNAGC | 1 cut(s) | 462 |
| BpuEI | CTTGAG | 1 cut(s) | 329 |
| BsaJI | CCNNGG | 1 cut(s) | 203 |
| BsaWI | WCCGGW | 1 cut(s) | 353 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 68, 81 |
| Bse118I | RCCGGY | 1 cut(s) | 318 |
| Bse3DI | GCAATG | 3 cut(s) | 21, 51, 168 |
| BseDI | CCNNGG | 1 cut(s) | 203 |
| BseGI | GGATG | 3 cut(s) | 57, 237, 509 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 68, 81 |
| BseMI | GCAATG | 3 cut(s) | 21, 51, 168 |
| BseMII | CTCAG | 2 cut(s) | 426, 476 |
| BseRI | GAGGAG | 1 cut(s) | 41 |
| BseXI | GCAGC | 1 cut(s) | 494 |
| BshFI | GGCC | 4 cut(s) | 29, 130, 167, 303 |
| BshNI | GGYRCC | 1 cut(s) | 71 |
| BsiSI | CCGG | 6 cut(s) | 75, 300, 319, 354, 367, 651 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 68, 81 |
| BsmAI | GTCTC | 1 cut(s) | 220 |
| BsmI | GAATGC | 1 cut(s) | 766 |
| BsnI | GGCC | 4 cut(s) | 29, 130, 167, 303 |
| Bsp1286I | GDGCHC | 1 cut(s) | 299 |
| Bsp143I | GATC | 3 cut(s) | 198, 377, 394 |
| BspACI | CCGC | 4 cut(s) | 26, 578, 581, 784 |
| BspANI | GGCC | 4 cut(s) | 29, 130, 167, 303 |
| BspCNI | CTCAG | 2 cut(s) | 427, 475 |
| BspLI | GGNNCC | 4 cut(s) | 73, 200, 209, 298 |
| BspPI | GGATC | 4 cut(s) | 193, 206, 372, 402 |
| BspT107I | GGYRCC | 1 cut(s) | 71 |
| BspTI | CTTAAG | 1 cut(s) | 386 |
| BsrDI | GCAATG | 3 cut(s) | 21, 51, 168 |
| BsrFI | RCCGGY | 1 cut(s) | 318 |
| BssAI | RCCGGY | 1 cut(s) | 318 |
| BssECI | CCNNGG | 1 cut(s) | 203 |
| BssMI | GATC | 3 cut(s) | 198, 377, 394 |
| Bst6I | CTCTTC | 1 cut(s) | 665 |
| BstAFI | CTTAAG | 1 cut(s) | 386 |
| BstC8I | GCNNGC | 5 cut(s) | 87, 175, 255, 596, 660 |
| BstDEI | CTNAG | 5 cut(s) | 8, 157, 413, 435, 462 |
| BstDSI | CCRYGG | 1 cut(s) | 203 |
| BstEII | GGTNACC | 1 cut(s) | 283 |
| BstF5I | GGATG | 3 cut(s) | 57, 237, 509 |
| BstKTI | GATC | 3 cut(s) | 201, 380, 397 |
| BstMAI | GTCTC | 1 cut(s) | 220 |
| BstMBI | GATC | 3 cut(s) | 198, 377, 394 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 633, 642 |
| BstPI | GGTNACC | 1 cut(s) | 283 |
| BstV1I | GCAGC | 1 cut(s) | 494 |
| BstV2I | GAAGAC | 1 cut(s) | 780 |
| BstX2I | RGATCY | 1 cut(s) | 198 |
| BstYI | RGATCY | 1 cut(s) | 198 |
| BsuRI | GGCC | 4 cut(s) | 29, 130, 167, 303 |
| BtgI | CCRYGG | 1 cut(s) | 203 |
| BtsCI | GGATG | 3 cut(s) | 57, 237, 509 |
| BtsI | GCAGTG | 1 cut(s) | 605 |
| BtsIMutI | CAGTG | 2 cut(s) | 90, 605 |
| Cac8I | GCNNGC | 5 cut(s) | 87, 175, 255, 596, 660 |
| Cfr10I | RCCGGY | 1 cut(s) | 318 |
| CviAII | CATG | 4 cut(s) | 232, 280, 289, 586 |
| DdeI | CTNAG | 5 cut(s) | 8, 157, 413, 435, 462 |
| DpnI | GATC | 3 cut(s) | 200, 379, 396 |
| DpnII | GATC | 3 cut(s) | 198, 377, 394 |
| DraIII | CACNNNGTG | 1 cut(s) | 527 |
| EaeI | YGGCCR | 3 cut(s) | 27, 165, 301 |
| Eam1104I | CTCTTC | 1 cut(s) | 665 |
| EarI | CTCTTC | 1 cut(s) | 665 |
| EciI | GGCGGA | 1 cut(s) | 596 |
| Eco24I | GRGCYC | 1 cut(s) | 299 |
| Eco57I | CTGAAG | 1 cut(s) | 689 |
| Eco91I | GGTNACC | 1 cut(s) | 283 |
| EcoO65I | GGTNACC | 1 cut(s) | 283 |
| EcoT38I | GRGCYC | 1 cut(s) | 299 |
| FaeI | CATG | 4 cut(s) | 235, 283, 292, 589 |
| FaiI | YATR | 9 cut(s) | 149, 233, 245, 281, 290, 428, 587, 698, 804 |
| FatI | CATG | 4 cut(s) | 231, 279, 288, 585 |
| Fnu4HI | GCNGC | 3 cut(s) | 27, 508, 579 |
| FokI | GGATG | 3 cut(s) | 44, 224, 516 |
| FriOI | GRGCYC | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 3 cut(s) | 27, 508, 579 |
| FspBI | CTAG | 1 cut(s) | 713 |
| GluI | GCNGC | 3 cut(s) | 27, 508, 579 |
| HaeIII | GGCC | 4 cut(s) | 29, 130, 167, 303 |
| HapII | CCGG | 6 cut(s) | 75, 300, 319, 354, 367, 651 |
| Hin1II | CATG | 4 cut(s) | 235, 283, 292, 589 |
| HinfI | GANTC | 4 cut(s) | 78, 118, 442, 638 |
| HpaII | CCGG | 6 cut(s) | 75, 300, 319, 354, 367, 651 |
| HphI | GGTGA | 1 cut(s) | 277 |
| Hpy166II | GTNNAC | 1 cut(s) | 544 |
| Hpy188I | TCNGA | 3 cut(s) | 404, 447, 669 |
| Hpy188III | TCNNGA | 4 cut(s) | 308, 341, 464, 501 |
| Hpy8I | GTNNAC | 1 cut(s) | 544 |
| HpyCH4V | TGCA | 5 cut(s) | 44, 496, 510, 598, 645 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 633, 642 |
| HpyF3I | CTNAG | 5 cut(s) | 8, 157, 413, 435, 462 |
| Hsp92II | CATG | 4 cut(s) | 235, 283, 292, 589 |
| Kzo9I | GATC | 3 cut(s) | 198, 377, 394 |
| LmnI | GCTCC | 3 cut(s) | 54, 213, 302 |
| Lsp1109I | GCAGC | 1 cut(s) | 494 |
| LweI | GCATC | 2 cut(s) | 408, 494 |
| MaeI | CTAG | 1 cut(s) | 713 |
| MaeIII | GTNAC | 1 cut(s) | 283 |
| MalI | GATC | 3 cut(s) | 200, 379, 396 |
| MboI | GATC | 3 cut(s) | 198, 377, 394 |
| MboII | GAAGA | 3 cut(s) | 682, 696, 785 |
| MflI | RGATCY | 1 cut(s) | 198 |
| MhlI | GDGCHC | 1 cut(s) | 299 |
| MlsI | TGGCCA | 1 cut(s) | 167 |
| MluNI | TGGCCA | 1 cut(s) | 167 |
| MnlI | CCTC | 5 cut(s) | 62, 189, 251, 285, 393 |
| Mox20I | TGGCCA | 1 cut(s) | 167 |
| MscI | TGGCCA | 1 cut(s) | 167 |
| MseI | TTAA | 3 cut(s) | 387, 474, 570 |
| MslI | CAYNNNNRTG | 3 cut(s) | 278, 342, 539 |
| Msp20I | TGGCCA | 1 cut(s) | 167 |
| MspCI | CTTAAG | 1 cut(s) | 386 |
| MspI | CCGG | 6 cut(s) | 75, 300, 319, 354, 367, 651 |
| Mva1269I | GAATGC | 1 cut(s) | 766 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 633, 642 |
| NdeII | GATC | 3 cut(s) | 198, 377, 394 |
| NlaIII | CATG | 4 cut(s) | 235, 283, 292, 589 |
| NlaIV | GGNNCC | 4 cut(s) | 73, 200, 209, 298 |
| NmeAIII | GCCGAG | 1 cut(s) | 339 |
| NmuCI | GTSAC | 1 cut(s) | 283 |
| OliI | CACNNNNGTG | 1 cut(s) | 539 |
| PctI | GAATGC | 1 cut(s) | 766 |
| PfeI | GAWTC | 4 cut(s) | 78, 118, 442, 638 |
| PkrI | GCNGC | 3 cut(s) | 28, 509, 580 |
| PspEI | GGTNACC | 1 cut(s) | 283 |
| PspN4I | GGNNCC | 4 cut(s) | 73, 200, 209, 298 |
| PsuI | RGATCY | 1 cut(s) | 198 |
| RseI | CAYNNNNRTG | 3 cut(s) | 278, 342, 539 |
| SaqAI | TTAA | 3 cut(s) | 387, 474, 570 |
| SatI | GCNGC | 3 cut(s) | 27, 508, 579 |
| Sau3AI | GATC | 3 cut(s) | 198, 377, 394 |
| SduI | GDGCHC | 1 cut(s) | 299 |
| SfaNI | GCATC | 2 cut(s) | 408, 494 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 278, 342, 539 |
| SmlI | CTYRAG | 2 cut(s) | 308, 386 |
| SmoI | CTYRAG | 2 cut(s) | 308, 386 |
| SsiI | CCGC | 4 cut(s) | 26, 578, 581, 784 |
| SspMI | CTAG | 1 cut(s) | 713 |
| TaqI | TCGA | 2 cut(s) | 376, 454 |
| TauI | GCSGC | 2 cut(s) | 29, 581 |
| TfiI | GAWTC | 4 cut(s) | 78, 118, 442, 638 |
| Tru1I | TTAA | 3 cut(s) | 387, 474, 570 |
| Tru9I | TTAA | 3 cut(s) | 387, 474, 570 |
| TscAI | CASTG | 2 cut(s) | 97, 605 |
| TseFI | GTSAC | 1 cut(s) | 283 |
| TseI | GCWGC | 1 cut(s) | 507 |
| Tsp45I | GTSAC | 1 cut(s) | 283 |
| TspDTI | ATGAA | 1 cut(s) | 262 |
| TspRI | CASTG | 2 cut(s) | 97, 605 |
| Vha464I | CTTAAG | 1 cut(s) | 386 |
| XspI | CTAG | 1 cut(s) | 713 |