Rorug03G0276400

Domain of unknown function (DUF309)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
27309359 .. 27314842
5484 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0276400.1

Sequence Viewer

Length: 1926 bp
ATGACAACTTTGTTATCTACTTCAACTCTCTCTTCGACAACAAAGCTGAGCCTGAAGCTTATCAACAATGACAACCCAGCTCCGAAATCCCACCTCGCCACAGACAAGTACAAACATACCCAAAAGGTTTCATTCGTAAGTCTTGCTGTAAAGAAGCAACAAAGCATTGAAACAATCCAGAAAGTTGATGGGAAGATCACTAGGAGGAGAAAAGGTGGTGGAAGTGGAACCCCATTTTTGAGTGAGGGAAGAGATGAGGATGAGAGCTATGGTCCAGTTTGCCCTGGCTGTGGAATCTTTATGCAAGATAACAACCCAGACCTTCCTGGGTATTATAAGCAAAGGAAGTTAACTGTATCAGAGTTGCCAGATGTTGAAGAGTTTGATGAGGAAGAGGAGGACATTGAGGGTAGCTATGAAGAAAGTGATGGGGAAGAAAGTGAATTGGAAATGGGGGATGATGAGTTTGACTGGGATTCAGATGACTTGGAATCTAAGTTGTTGGGGGAGGAAGAAGAGAATGATTTGGATTTGGATGGTTTTGCCCCTGCAGGGGTTGGGTATGGTAACATTAAGGAGGAGACTATAGAGAAAATGAAGAGGAAGAAGATTCCAAAAGCCGAAAAGAAGAGAATGGCTAGAGAGGCTCAGAAAGAGAAAGATGAGGTCACTGTGTGCGCCAGATGCCATTCATTGAGAAATTATGGGCAGGTGAAAAACCAAGCAGCCGAAAACTTGATGCCCGATTTTGATTTCGATAGGTTGATTGCAACCCGGTTGATTAAACCTGCTACTAATGCCAATCCTGTTGTGGTTATGGTTGTTGATTGTGTTGATTTTGATGGCTCATTCCCCAAACGGGCAGCAAAGTCATTGTTTCAGGCATTGAGAGGAACCGAGAATGATCCCAAGTTTCGGAAAAAAATGCCAAAGCTTGTTCTTGTGGCCACAAAGGTTGATCTCCTCCCATCACAAGTTTCACCTTCTAGATTAGATAGATGGGTACGCCATCGTTCTAAGGCTGGAGGGGGACCTAAACTGAGTGGAGTGTATTTGGTTAGTGCTCATAAGGATGTGGGTGTCAGAAATTTGTTGTCCTTTCTCAAAGAATTGGCAGGTCCTCGAGGGAATGTGTGGGTTGTTGGAGCTCAAAATGCAGGCAAGTCTACTCTAATAAATGCGCTGGCAAAGAAAGAAGGGGCAAAGGTTACAAAGCTAACTGAAGCTCCAGTTCCTGGCACAACATTAGGGATCCTGAGAGTTGGAGGGATTTTGTCAGCCAAGGCAAAGTTGTTTGACACTCCAGGACTTTTACATCCATATTTGGTCTCCATGAGATTGAATAGGGATGAACAGAAAATGGTTGAAATACGGAAGGAGCTTCGCCCTCGGACTTATAGGATAAAGGCAAGGCAGACCATTCATATTGGTGGTTTAGTGAGAGTAGACCTTATTCAAGCCTCTATTGAAACAATTTATTTCACAATATGGGCCTCACCAAATATTTCTTTACATATGGGGAAGACAGAAAATGCTGAAGAGACTTGGAGGAAACATGTTGGCGTTAGGTTGCAGCCACCTATTGGCATCGATCGCGCTGCTGACATAGGCAAATGGGAAGAGAGGGAAGTCAAAGTGTCTGGAGCCAGTTGGGATGTAAATAGCATCGACATTGCTATAGCTGGTTTAGGCTGGTTTTCTTTAGGTCTCAAAGGGGAAGCAACTTTGGCATTATGGACATATGATGGTATTGAAATTACTCTGAGAGAACCATTGGTTCTTGATAGGGCACCATCGCTTGAGAGACCTGGGTTCTGGCTTCCAAAAGCAATATCTGAGGCCCTTGGTGCTCAGAGTAAACTTGAAGCTCAAAGGAAAAAGCTAGAAATGGAAAATGCAGATTCCCTTTCTGAGGCAGTTTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

641

Amino Acids

71.2

Weight (kDa)

6.58

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 378 - 445 5.3e-10 50S ribosome-binding GTPase
YqeH-like_C PF21516 494 - 591 6.9e-10 YqeH-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000206)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04631 FvH4_1g14871 FvH4_3g18183 FvH4_4g07540 FvH4_4g11860 FvH4_4g12252 FvH4_4g14180 FvH4_4g24130 FvH4_5g15962 FvH4_5g21900 FvH4_5g34730 FvH4_5g38071 FvH4_6g38832 FvH4_7g00330 FvH4_7g07670 FvH4_7g08131 FvH4_7g29320
malus_domestica MD02G1308300.v1.1 MD03G1238900.v1.1 MD04G1103900.v1.1 MD08G1183800.v1.1 MD11G1096700.v1.1 MD11G1261300.v1.1 MD12G1048200.v1.1
pyrus_communis pycom01g07190 pycom01g17380 pycom02g05990 pycom02g17700 pycom02g17760 pycom02g17780 pycom03g02490 pycom03g07080 pycom03g08120 pycom03g11190 pycom03g11870 pycom03g16280 pycom04g02290 pycom04g05180 pycom04g07420 pycom04g10470 pycom04g10920 pycom04g11540 pycom05g00050 pycom05g04730 pycom05g04740 pycom05g07820 pycom05g13620 pycom05g19310 pycom06g03270 pycom06g08270 pycom06g09330 pycom06g20220 pycom07g08390 pycom07g22600 pycom08g09490 pycom08g13210 pycom08g14280 pycom08g15750 pycom08g18990 pycom08g21650 pycom09g01710 pycom09g03180 pycom09g09280 pycom09g10200 pycom09g11120 pycom09g11440 pycom10g02740 pycom10g07660 pycom10g09060 pycom10g20040 pycom111g01670 pycom11g08660 pycom11g09000 pycom11g12870 pycom11g14470 pycom11g15540 pycom11g19420 pycom11g22090 pycom12g10660 pycom12g11050 pycom12g12790 pycom12g14250 pycom13g14570 pycom13g26080 pycom14g00240 pycom15g10960 pycom15g24390 pycom15g31880 pycom15g32630 pycom15g33590 pycom16g07100 pycom16g09710 pycom16g20130 pycom16g21120 pycom17g02320 pycom17g11710 pycom17g14970 pycom17g19270 pycom17g22280 pycom17g23050 pycom17g25230
rosa_chinensis RchiOBHm_Chr7g0200361 RchiOBHm_Chr7g0226641
rosa_laevigata RLG00000030820
rosa_multiflora Rmu_sc0000129.1_g000009 Rmu_sc0000536.1_g000032 Rmu_sc0000663.1_g000015 Rmu_sc0000758.1_g000016 Rmu_sc0000857.1_g000019 Rmu_sc0001004.1_g000011 Rmu_sc0001096.1_g000018 Rmu_sc0001715.1_g000021 Rmu_sc0001781.1_g000006 Rmu_sc0002467.1_g000014 Rmu_sc0003018.1_g000003 Rmu_sc0003902.1_g000020 Rmu_sc0004048.1_g000013 Rmu_sc0005725.1_g000016 Rmu_sc0007871.1_g000002 Rmu_sc0008009.1_g000003 Rmu_sc0008223.1_g000013 Rmu_sc0008528.1_g000009 Rmu_sc0010621.1_g000003 Rmu_sc0010856.1_g000004 Rmu_sc0013113.1_g000005 Rmu_sc0016149.1_g000007 Rmu_ssc0000027.1_g000004 Rmu_ssc0000201.1_g000019
rosa_roxburghii Rroxscaffold_2G00109130 Rroxscaffold_3G00232550 Rroxscaffold_7G00176580
rosa_rugosa Rorug03G0276400 Rorug03G0276400
rosa_samantha Rh1CG005700 Rh2BG308900 Rh3BG239200 Rh4DG043100 Rh5AG498300 Rh5CG377400 Rh7BG373200 Rh7DG189000
rosa_wichuraiana Rw0G006950 Rw1G019470 Rw1G027440 Rw2G041930 Rw3G022370 Rw4G013430 Rw4G023110 Rw5G008510 Rw5G043680 Rw6G021680 Rw7G039660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 336
AarI CACCTGC 1 cut(s) 700
AbsI CCTCGAGG 1 cut(s) 1122
Acc36I ACCTGC 3 cut(s) 700, 796, 1106
AccB1I GGYRCC 1 cut(s) 1789
AccB7I CCANNNNNTGG 2 cut(s) 1235, 1583
AccI GTMKAC 2 cut(s) 1166, 1446
AccII CGCG 1 cut(s) 1596
AclWI GGATC 3 cut(s) 899, 1246, 1259
AcoI YGGCCR 1 cut(s) 945
AcsI RAATTY 1 cut(s) 1087
AcuI CTGAAG 3 cut(s) 74, 1242, 1557
AdeI CACNNNGTG 1 cut(s) 675
AfaI GTAC 2 cut(s) 110, 1005
AfiI CCNNNNNNNGG 8 cut(s) 290, 552, 553, 859, 915, 1235, 1583, 1912
AflIII ACRYGT 1 cut(s) 1555
AgsI TTSAA 9 cut(s) 24, 170, 377, 1342, 1367, 1457, 1469, 1754, 1865
AjnI CCWGG 5 cut(s) 283, 325, 1234, 1303, 1807
Alw21I GWGCWC 3 cut(s) 1066, 1150, 1852
Alw26I GTCTC 5 cut(s) 575, 1333, 1535, 1712, 1798
AlwI GGATC 3 cut(s) 899, 1246, 1259
AlwNI CAGNNNCTG 1 cut(s) 1235
Ama87I CYCGRG 1 cut(s) 1122
AoxI GGCC 3 cut(s) 945, 1491, 1839
ApeKI GCWGC 4 cut(s) 725, 863, 1573, 1598
ApoI RAATTY 1 cut(s) 1087
AspLEI GCGC 3 cut(s) 680, 1183, 1598
AspS9I GGNCC 5 cut(s) 272, 1031, 1118, 1491, 1840
AsuC2I CCSGG 1 cut(s) 775
AsuHPI GGTGA 3 cut(s) 724, 972, 1488
AvaI CYCGRG 1 cut(s) 1122
AvaII GGWCC 3 cut(s) 272, 1031, 1118
BaeGI GKGCMC 1 cut(s) 1792
BalI TGGCCA 1 cut(s) 947
BamHI GGATCC 1 cut(s) 1251
BanI GGYRCC 1 cut(s) 1789
BanII GRGCYC 1 cut(s) 1150
BbsI GAAGAC 1 cut(s) 1529
Bbv12I GWGCWC 3 cut(s) 1066, 1150, 1852
BbvI GCAGC 4 cut(s) 737, 875, 1585, 1585
BccI CCATC 9 cut(s) 182, 422, 530, 836, 976, 993, 1017, 1739, 1801
BcgI CGANNNNNNTGC 2 cut(s) 1580, 1614
BciT130I CCWGG 5 cut(s) 285, 327, 1236, 1305, 1809
BcnI CCSGG 1 cut(s) 775
BcoDI GTCTC 5 cut(s) 575, 1333, 1535, 1712, 1798
BfaI CTAG 4 cut(s) 201, 639, 987, 1883
BfmI CTRYAG 3 cut(s) 549, 585, 1677
BfuAI ACCTGC 3 cut(s) 700, 796, 1106
BisI GCNGC 4 cut(s) 726, 864, 1574, 1599
BlpI GCTNAGC 1 cut(s) 47
BlsI GCNGC 4 cut(s) 727, 865, 1575, 1600
Bme1390I CCNGG 6 cut(s) 285, 327, 775, 1236, 1305, 1809
Bme18I GGWCC 3 cut(s) 272, 1031, 1118
BmeT110I CYCGRG 1 cut(s) 1122
BmgT120I GGNCC 5 cut(s) 272, 1031, 1118, 1491, 1840
BmiI GGNNCC 6 cut(s) 229, 895, 1032, 1253, 1645, 1791
BmrFI CCNGG 6 cut(s) 285, 327, 775, 1236, 1305, 1809
BmrI ACTGGG 1 cut(s) 481
BmsI GCATC 4 cut(s) 674, 729, 1596, 1674
BmuI ACTGGG 1 cut(s) 481
BpiI GAAGAC 1 cut(s) 1529
BpmI CTGGAG 4 cut(s) 1044, 1212, 1287, 1662
Bpu1102I GCTNAGC 1 cut(s) 47
BpuEI CTTGAG 1 cut(s) 1820
BpuMI CCSGG 1 cut(s) 775
Bsa29I ATCGAT 1 cut(s) 1590
BsaI GGTCTC 3 cut(s) 1333, 1712, 1798
BsaJI CCNNGG 6 cut(s) 283, 326, 1281, 1388, 1808, 1843
BsaXI ACNNNNNCTCC 4 cut(s) 199, 229, 1210, 1240
Bsc4I CCNNNNNNNGG 8 cut(s) 290, 552, 553, 859, 915, 1235, 1583, 1912
Bse1I ACTGG 4 cut(s) 275, 476, 1229, 1647
Bse3DI GCAATG 1 cut(s) 1671
BseBI CCWGG 5 cut(s) 285, 327, 1236, 1305, 1809
BseCI ATCGAT 1 cut(s) 1590
BseDI CCNNGG 6 cut(s) 283, 326, 1281, 1388, 1808, 1843
BseGI GGATG 7 cut(s) 265, 463, 541, 1078, 1315, 1354, 1660
BseLI CCNNNNNNNGG 8 cut(s) 290, 552, 553, 859, 915, 1235, 1583, 1912
BseMI GCAATG 1 cut(s) 1671
BseMII CTCAG 8 cut(s) 38, 662, 1031, 1247, 1754, 1827, 1865, 1902
BseNI ACTGG 4 cut(s) 275, 476, 1229, 1647
BseRI GAGGAG 4 cut(s) 220, 410, 593, 953
BseSI GKGCMC 1 cut(s) 1792
BseXI GCAGC 4 cut(s) 737, 875, 1585, 1585
BseYI CCCAGC 1 cut(s) 76
Bsh1236I CGCG 1 cut(s) 1596
Bsh1285I CGRYCG 1 cut(s) 1594
BshFI GGCC 3 cut(s) 947, 1493, 1841
BshNI GGYRCC 1 cut(s) 1789
BshVI ATCGAT 1 cut(s) 1590
BsiEI CGRYCG 1 cut(s) 1594
BsiHKAI GWGCWC 3 cut(s) 1066, 1150, 1852
BsiHKCI CYCGRG 1 cut(s) 1122
BsiSI CCGG 1 cut(s) 775
BslFI GGGAC 1 cut(s) 1044
BslI CCNNNNNNNGG 8 cut(s) 290, 552, 553, 859, 915, 1235, 1583, 1912
BsmAI GTCTC 5 cut(s) 575, 1333, 1535, 1712, 1798
BsmFI GGGAC 1 cut(s) 1044
BsnI GGCC 3 cut(s) 947, 1493, 1841
Bso31I GGTCTC 3 cut(s) 1333, 1712, 1798
BsoBI CYCGRG 1 cut(s) 1122
Bsp1286I GDGCHC 4 cut(s) 1066, 1150, 1792, 1852
Bsp143I GATC 5 cut(s) 195, 904, 958, 1251, 1591
Bsp1720I GCTNAGC 1 cut(s) 47
BspANI GGCC 3 cut(s) 947, 1493, 1841
BspCNI CTCAG 8 cut(s) 39, 661, 1032, 1248, 1755, 1828, 1864, 1903
BspDI ATCGAT 1 cut(s) 1590
BspFNI CGCG 1 cut(s) 1596
BspLI GGNNCC 6 cut(s) 229, 895, 1032, 1253, 1645, 1791
BspMAI CTGCAG 1 cut(s) 553
BspMI ACCTGC 3 cut(s) 700, 796, 1106
BspPI GGATC 3 cut(s) 899, 1246, 1259
BspT107I GGYRCC 1 cut(s) 1789
BspTNI GGTCTC 3 cut(s) 1333, 1712, 1798
BsrDI GCAATG 1 cut(s) 1671
BsrI ACTGG 4 cut(s) 275, 476, 1229, 1647
BssECI CCNNGG 6 cut(s) 283, 326, 1281, 1388, 1808, 1843
BssMI GATC 5 cut(s) 195, 904, 958, 1251, 1591
BssT1I CCWWGG 2 cut(s) 1281, 1843
Bst2UI CCWGG 5 cut(s) 285, 327, 1236, 1305, 1809
Bst4CI ACNGT 2 cut(s) 355, 673
Bst6I CTCTTC 9 cut(s) 37, 244, 372, 387, 510, 593, 623, 1533, 1614
BstC8I GCNNGC 2 cut(s) 1159, 1185
BstENI CCTNNNNNAGG 1 cut(s) 1910
BstF5I GGATG 7 cut(s) 265, 463, 541, 1078, 1315, 1354, 1660
BstFNI CGCG 1 cut(s) 1596
BstHHI GCGC 3 cut(s) 680, 1183, 1598
BstKTI GATC 5 cut(s) 198, 907, 961, 1254, 1594
BstMAI GTCTC 5 cut(s) 575, 1333, 1535, 1712, 1798
BstMBI GATC 5 cut(s) 195, 904, 958, 1251, 1591
BstMCI CGRYCG 1 cut(s) 1594
BstMWI GCNNNNNNNGC 7 cut(s) 644, 684, 797, 1154, 1593, 1727, 1847
BstNI CCWGG 5 cut(s) 285, 327, 1236, 1305, 1809
BstNSI RCATGY 1 cut(s) 1559
BstSCI CCNGG 6 cut(s) 283, 325, 773, 1234, 1303, 1807
BstSFI CTRYAG 3 cut(s) 549, 585, 1677
BstSLI GKGCMC 1 cut(s) 1792
BstUI CGCG 1 cut(s) 1596
BstV1I GCAGC 4 cut(s) 737, 875, 1585, 1585
BstV2I GAAGAC 1 cut(s) 1529
BstX2I RGATCY 1 cut(s) 1251
BstYI RGATCY 1 cut(s) 1251
Bsu15I ATCGAT 1 cut(s) 1590
BsuRI GGCC 3 cut(s) 947, 1493, 1841
BsuTUI ATCGAT 1 cut(s) 1590
BtgZI GCGATG 1 cut(s) 1779
BtsCI GGATG 7 cut(s) 265, 463, 541, 1078, 1315, 1354, 1660
BtsIMutI CAGTG 1 cut(s) 669
BveI ACCTGC 3 cut(s) 700, 796, 1106
Cac8I GCNNGC 2 cut(s) 1159, 1185
CaiI CAGNNNCTG 1 cut(s) 1235
CfoI GCGC 3 cut(s) 680, 1183, 1598
Cfr13I GGNCC 5 cut(s) 272, 1031, 1118, 1491, 1840
ClaI ATCGAT 1 cut(s) 1590
Csp6I GTAC 2 cut(s) 109, 1004
CspCI CAANNNNNGTGG 2 cut(s) 937, 972
CviAII CATG 2 cut(s) 1333, 1556
CviQI GTAC 2 cut(s) 109, 1004
DpnI GATC 5 cut(s) 197, 906, 960, 1253, 1593
DpnII GATC 5 cut(s) 195, 904, 958, 1251, 1591
DraIII CACNNNGTG 1 cut(s) 675
EaeI YGGCCR 1 cut(s) 945
Eam1104I CTCTTC 9 cut(s) 37, 244, 372, 387, 510, 593, 623, 1533, 1614
EarI CTCTTC 9 cut(s) 37, 244, 372, 387, 510, 593, 623, 1533, 1614
Ecl136II GAGCTC 1 cut(s) 1148
Eco130I CCWWGG 2 cut(s) 1281, 1843
Eco24I GRGCYC 1 cut(s) 1150
Eco31I GGTCTC 3 cut(s) 1333, 1712, 1798
Eco47I GGWCC 3 cut(s) 272, 1031, 1118
Eco53kI GAGCTC 1 cut(s) 1148
Eco57I CTGAAG 3 cut(s) 74, 1242, 1557
Eco88I CYCGRG 1 cut(s) 1122
EcoICRI GAGCTC 1 cut(s) 1148
EcoNI CCTNNNNNAGG 1 cut(s) 1910
EcoO109I RGGNCCY 3 cut(s) 1031, 1118, 1840
EcoRII CCWGG 5 cut(s) 283, 325, 1234, 1303, 1807
EcoT14I CCWWGG 2 cut(s) 1281, 1843
EcoT38I GRGCYC 1 cut(s) 1150
ErhI CCWWGG 2 cut(s) 1281, 1843
FaeI CATG 2 cut(s) 1336, 1559
FaqI GGGAC 1 cut(s) 1044
FatI CATG 2 cut(s) 1332, 1555
FauNDI CATATG 2 cut(s) 1515, 1741
FblI GTMKAC 2 cut(s) 1166, 1446
Fnu4HI GCNGC 4 cut(s) 726, 864, 1574, 1599
FokI GGATG 7 cut(s) 272, 470, 548, 1085, 1302, 1361, 1667
FriOI GRGCYC 1 cut(s) 1150
Fsp4HI GCNGC 4 cut(s) 726, 864, 1574, 1599
FspBI CTAG 4 cut(s) 201, 639, 987, 1883
GlaI GCGC 3 cut(s) 679, 1182, 1597
GluI GCNGC 4 cut(s) 726, 864, 1574, 1599
GsaI CCCAGC 1 cut(s) 80
GsuI CTGGAG 4 cut(s) 1044, 1212, 1287, 1662
HaeIII GGCC 3 cut(s) 947, 1493, 1841
HapII CCGG 1 cut(s) 775
HhaI GCGC 3 cut(s) 680, 1183, 1598
Hin1II CATG 2 cut(s) 1336, 1559
Hin6I GCGC 3 cut(s) 678, 1181, 1596
HinP1I GCGC 3 cut(s) 678, 1181, 1596
HincII GTYRAC 1 cut(s) 351
HindII GTYRAC 1 cut(s) 351
HindIII AAGCTT 2 cut(s) 56, 932
HinfI GANTC 5 cut(s) 294, 476, 491, 610, 1901
HpaI GTTAAC 1 cut(s) 351
HpaII CCGG 1 cut(s) 775
HphI GGTGA 3 cut(s) 724, 972, 1488
Hpy166II GTNNAC 4 cut(s) 351, 1167, 1447, 1859
Hpy188III TCNNGA 5 cut(s) 178, 987, 1255, 1641, 1781
Hpy8I GTNNAC 4 cut(s) 351, 1167, 1447, 1859
HpyAV CCTTC 4 cut(s) 332, 993, 1190, 1369
HpyCH4III ACNGT 2 cut(s) 355, 673
HpyCH4V TGCA 6 cut(s) 304, 551, 770, 1157, 1573, 1898
HpyF10VI GCNNNNNNNGC 7 cut(s) 644, 684, 797, 1154, 1593, 1727, 1847
Hsp92II CATG 2 cut(s) 1336, 1559
HspAI GCGC 3 cut(s) 678, 1181, 1596
KspAI GTTAAC 1 cut(s) 351
Kzo9I GATC 5 cut(s) 195, 904, 958, 1251, 1591
LmnI GCTCC 5 cut(s) 85, 1145, 1231, 1378, 1643
Lsp1109I GCAGC 4 cut(s) 737, 875, 1585, 1585
LweI GCATC 4 cut(s) 674, 729, 1596, 1674
MaeI CTAG 4 cut(s) 201, 639, 987, 1883
MaeIII GTNAC 3 cut(s) 566, 667, 1207
MalI GATC 5 cut(s) 197, 906, 960, 1253, 1593
MboI GATC 5 cut(s) 195, 904, 958, 1251, 1591
MflI RGATCY 1 cut(s) 1251
MhlI GDGCHC 4 cut(s) 1066, 1150, 1792, 1852
MlsI TGGCCA 1 cut(s) 947
MluCI AATT 6 cut(s) 443, 700, 1087, 1109, 1473, 1755
MluNI TGGCCA 1 cut(s) 947
MmeI TCCRAC 2 cut(s) 1123, 1243
Mox20I TGGCCA 1 cut(s) 947
MscI TGGCCA 1 cut(s) 947
MseI TTAA 3 cut(s) 350, 573, 783
MslI CAYNNNNRTG 2 cut(s) 1071, 1428
Msp20I TGGCCA 1 cut(s) 947
MspI CCGG 1 cut(s) 775
MspR9I CCNGG 6 cut(s) 285, 327, 775, 1236, 1305, 1809
MvaI CCWGG 5 cut(s) 285, 327, 1236, 1305, 1809
MvnI CGCG 1 cut(s) 1596
MwoI GCNNNNNNNGC 7 cut(s) 644, 684, 797, 1154, 1593, 1727, 1847
NciI CCSGG 1 cut(s) 775
NdeI CATATG 2 cut(s) 1515, 1741
NdeII GATC 5 cut(s) 195, 904, 958, 1251, 1591
NlaIII CATG 2 cut(s) 1336, 1559
NlaIV GGNNCC 6 cut(s) 229, 895, 1032, 1253, 1645, 1791
NmuCI GTSAC 1 cut(s) 667
NspI RCATGY 1 cut(s) 1559
PaeR7I CTCGAG 1 cut(s) 1122
PaqCI CACCTGC 1 cut(s) 700
PciI ACATGT 1 cut(s) 1555
PfeI GAWTC 5 cut(s) 294, 476, 491, 610, 1901
PflMI CCANNNNNTGG 2 cut(s) 1235, 1583
PfoI TCCNGGA 1 cut(s) 1303
PkrI GCNGC 4 cut(s) 727, 865, 1575, 1600
Ple19I CGATCG 1 cut(s) 1594
PpuMI RGGWCCY 2 cut(s) 1031, 1118
PscI ACATGT 1 cut(s) 1555
PsiI TTATAA 1 cut(s) 336
Psp124BI GAGCTC 1 cut(s) 1150
Psp5II RGGWCCY 2 cut(s) 1031, 1118
Psp6I CCWGG 5 cut(s) 283, 325, 1234, 1303, 1807
PspFI CCCAGC 1 cut(s) 76
PspGI CCWGG 5 cut(s) 283, 325, 1234, 1303, 1807
PspN4I GGNNCC 6 cut(s) 229, 895, 1032, 1253, 1645, 1791
PspPI GGNCC 5 cut(s) 272, 1031, 1118, 1491, 1840
PspPPI RGGWCCY 2 cut(s) 1031, 1118
PspXI VCTCGAGB 1 cut(s) 1122
PstI CTGCAG 1 cut(s) 553
PstNI CAGNNNCTG 1 cut(s) 1235
PsuI RGATCY 1 cut(s) 1251
PvuI CGATCG 1 cut(s) 1594
RsaI GTAC 2 cut(s) 110, 1005
RsaNI GTAC 2 cut(s) 109, 1004
RseI CAYNNNNRTG 2 cut(s) 1071, 1428
SacI GAGCTC 1 cut(s) 1150
SaqAI TTAA 3 cut(s) 350, 573, 783
SatI GCNGC 4 cut(s) 726, 864, 1574, 1599
Sau3AI GATC 5 cut(s) 195, 904, 958, 1251, 1591
Sau96I GGNCC 5 cut(s) 272, 1031, 1118, 1491, 1840
SbfI CCTGCAGG 1 cut(s) 553
ScrFI CCNGG 6 cut(s) 285, 327, 775, 1236, 1305, 1809
SdaI CCTGCAGG 1 cut(s) 553
SduI GDGCHC 4 cut(s) 1066, 1150, 1792, 1852
SfaNI GCATC 4 cut(s) 674, 729, 1596, 1674
SfcI CTRYAG 3 cut(s) 549, 585, 1677
Sfr274I CTCGAG 1 cut(s) 1122
SinI GGWCC 3 cut(s) 272, 1031, 1118
SlaI CTCGAG 1 cut(s) 1122
SmiMI CAYNNNNRTG 2 cut(s) 1071, 1428
SmlI CTYRAG 2 cut(s) 1122, 1799
SmoI CTYRAG 2 cut(s) 1122, 1799
Sse8387I CCTGCAGG 1 cut(s) 553
Sse9I AATT 6 cut(s) 443, 700, 1087, 1109, 1473, 1755
SspI AATATT 1 cut(s) 1504
SspMI CTAG 4 cut(s) 201, 639, 987, 1883
SstI GAGCTC 1 cut(s) 1150
StyD4I CCNGG 6 cut(s) 283, 325, 773, 1234, 1303, 1807
StyI CCWWGG 2 cut(s) 1281, 1843
TaaI ACNGT 2 cut(s) 355, 673
TaqI TCGA 5 cut(s) 35, 756, 1123, 1590, 1668
TasI AATT 6 cut(s) 443, 700, 1087, 1109, 1473, 1755
TatI WGTACW 1 cut(s) 108
TfiI GAWTC 5 cut(s) 294, 476, 491, 610, 1901
Tru1I TTAA 3 cut(s) 350, 573, 783
Tru9I TTAA 3 cut(s) 350, 573, 783
TscAI CASTG 1 cut(s) 676
TseFI GTSAC 1 cut(s) 667
TseI GCWGC 4 cut(s) 725, 863, 1573, 1598
Tsp45I GTSAC 1 cut(s) 667
TspDTI ATGAA 6 cut(s) 120, 432, 611, 681, 1365, 1412
TspGWI ACGGA 1 cut(s) 1387
TspRI CASTG 1 cut(s) 676
Van91I CCANNNNNTGG 2 cut(s) 1235, 1583
VpaK11BI GGWCC 3 cut(s) 272, 1031, 1118
XagI CCTNNNNNAGG 1 cut(s) 1910
XapI RAATTY 1 cut(s) 1087
XbaI TCTAGA 1 cut(s) 986
XceI RCATGY 1 cut(s) 1559
XcmI CCANNNNNNNNNTGG 2 cut(s) 185, 808
XhoI CTCGAG 1 cut(s) 1122
XmiI GTMKAC 2 cut(s) 1166, 1446
XspI CTAG 4 cut(s) 201, 639, 987, 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.