Peptidyl-prolyl cis-trans isomerase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NAM-associated | PF14303 | 110 - 260 | 9.4e-13 | No apical meristem-associated C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 267 |
| AciI | CCGC | 2 cut(s) | 267, 813 |
| AclWI | GGATC | 2 cut(s) | 380, 393 |
| AcoI | YGGCCR | 1 cut(s) | 714 |
| AcsI | RAATTY | 4 cut(s) | 39, 213, 341, 680 |
| AfaI | GTAC | 1 cut(s) | 16 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 86 |
| AgsI | TTSAA | 5 cut(s) | 44, 208, 347, 680, 686 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 75 |
| AhlI | ACTAGT | 1 cut(s) | 428 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 180, 212 |
| AluBI | AGCT | 3 cut(s) | 182, 617, 628 |
| AluI | AGCT | 3 cut(s) | 182, 617, 628 |
| Alw26I | GTCTC | 4 cut(s) | 439, 453, 476, 499 |
| AlwI | GGATC | 2 cut(s) | 380, 393 |
| AoxI | GGCC | 1 cut(s) | 714 |
| ApeKI | GCWGC | 3 cut(s) | 566, 656, 810 |
| ApoI | RAATTY | 4 cut(s) | 39, 213, 341, 680 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 779, 811 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 123 |
| AspLEI | GCGC | 1 cut(s) | 559 |
| AspS9I | GGNCC | 1 cut(s) | 155 |
| AsuHPI | GGTGA | 2 cut(s) | 362, 785 |
| AsuII | TTCGAA | 1 cut(s) | 199 |
| AvaII | GGWCC | 1 cut(s) | 155 |
| BalI | TGGCCA | 1 cut(s) | 716 |
| BamHI | GGATCC | 1 cut(s) | 385 |
| BbvI | GCAGC | 3 cut(s) | 578, 643, 822 |
| BccI | CCATC | 3 cut(s) | 400, 496, 794 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 402, 436 |
| BciVI | GTATCC | 1 cut(s) | 715 |
| BcoDI | GTCTC | 4 cut(s) | 439, 453, 476, 499 |
| BcuI | ACTAGT | 1 cut(s) | 428 |
| BfaI | CTAG | 2 cut(s) | 429, 629 |
| BfuI | GTATCC | 1 cut(s) | 715 |
| BisI | GCNGC | 3 cut(s) | 567, 657, 811 |
| BlsI | GCNGC | 3 cut(s) | 568, 658, 812 |
| Bme18I | GGWCC | 1 cut(s) | 155 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 75 |
| BmgT120I | GGNCC | 1 cut(s) | 155 |
| BmiI | GGNNCC | 2 cut(s) | 271, 387 |
| BmsI | GCATC | 3 cut(s) | 422, 553, 691 |
| Bpu14I | TTCGAA | 1 cut(s) | 199 |
| BpuEI | CTTGAG | 2 cut(s) | 162, 597 |
| BsaI | GGTCTC | 1 cut(s) | 499 |
| BsaJI | CCNNGG | 3 cut(s) | 528, 597, 717 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 86 |
| Bse118I | RCCGGY | 1 cut(s) | 409 |
| BseDI | CCNNGG | 3 cut(s) | 528, 597, 717 |
| BseGI | GGATG | 3 cut(s) | 289, 322, 469 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BseMII | CTCAG | 1 cut(s) | 206 |
| BseRI | GAGGAG | 2 cut(s) | 47, 165 |
| BseXI | GCAGC | 3 cut(s) | 578, 643, 822 |
| BshFI | GGCC | 1 cut(s) | 716 |
| BsiSI | CCGG | 1 cut(s) | 410 |
| BslFI | GGGAC | 1 cut(s) | 528 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 86 |
| BsmAI | GTCTC | 4 cut(s) | 439, 453, 476, 499 |
| BsmFI | GGGAC | 1 cut(s) | 528 |
| BsnI | GGCC | 1 cut(s) | 716 |
| Bso31I | GGTCTC | 1 cut(s) | 499 |
| Bsp119I | TTCGAA | 1 cut(s) | 199 |
| Bsp143I | GATC | 2 cut(s) | 81, 385 |
| Bsp19I | CCATGG | 2 cut(s) | 597, 717 |
| BspACI | CCGC | 2 cut(s) | 267, 813 |
| BspANI | GGCC | 1 cut(s) | 716 |
| BspCNI | CTCAG | 1 cut(s) | 205 |
| BspHI | TCATGA | 1 cut(s) | 312 |
| BspLI | GGNNCC | 2 cut(s) | 271, 387 |
| BspPI | GGATC | 2 cut(s) | 380, 393 |
| BspT104I | TTCGAA | 1 cut(s) | 199 |
| BspTNI | GGTCTC | 1 cut(s) | 499 |
| BsrBI | CCGCTC | 1 cut(s) | 267 |
| BsrFI | RCCGGY | 1 cut(s) | 409 |
| BssAI | RCCGGY | 1 cut(s) | 409 |
| BssECI | CCNNGG | 3 cut(s) | 528, 597, 717 |
| BssMI | GATC | 2 cut(s) | 81, 385 |
| BssT1I | CCWWGG | 3 cut(s) | 528, 597, 717 |
| Bst4CI | ACNGT | 1 cut(s) | 73 |
| Bst6I | CTCTTC | 1 cut(s) | 681 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 816 |
| BstBI | TTCGAA | 1 cut(s) | 199 |
| BstDEI | CTNAG | 1 cut(s) | 192 |
| BstDSI | CCRYGG | 2 cut(s) | 597, 717 |
| BstF5I | GGATG | 3 cut(s) | 289, 322, 469 |
| BstHHI | GCGC | 1 cut(s) | 559 |
| BstKTI | GATC | 2 cut(s) | 84, 388 |
| BstMAI | GTCTC | 4 cut(s) | 439, 453, 476, 499 |
| BstMBI | GATC | 2 cut(s) | 81, 385 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 148, 533, 563, 593, 816 |
| BstV1I | GCAGC | 3 cut(s) | 578, 643, 822 |
| BstX2I | RGATCY | 1 cut(s) | 385 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 280 |
| BstYI | RGATCY | 1 cut(s) | 385 |
| BsuI | GTATCC | 1 cut(s) | 715 |
| BsuRI | GGCC | 1 cut(s) | 716 |
| BtgI | CCRYGG | 2 cut(s) | 597, 717 |
| BtsCI | GGATG | 3 cut(s) | 289, 322, 469 |
| CciI | TCATGA | 1 cut(s) | 312 |
| CfoI | GCGC | 1 cut(s) | 559 |
| Cfr10I | RCCGGY | 1 cut(s) | 409 |
| Cfr13I | GGNCC | 1 cut(s) | 155 |
| Csp6I | GTAC | 1 cut(s) | 15 |
| CviAII | CATG | 6 cut(s) | 57, 128, 313, 499, 598, 718 |
| CviQI | GTAC | 1 cut(s) | 15 |
| DdeI | CTNAG | 1 cut(s) | 192 |
| DpnI | GATC | 2 cut(s) | 83, 387 |
| DpnII | GATC | 2 cut(s) | 81, 385 |
| DriI | GACNNNNNGTC | 1 cut(s) | 75 |
| EaeI | YGGCCR | 1 cut(s) | 714 |
| Eam1104I | CTCTTC | 1 cut(s) | 681 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 75 |
| EarI | CTCTTC | 1 cut(s) | 681 |
| Eco130I | CCWWGG | 3 cut(s) | 528, 597, 717 |
| Eco31I | GGTCTC | 1 cut(s) | 499 |
| Eco32I | GATATC | 2 cut(s) | 307, 778 |
| Eco47I | GGWCC | 1 cut(s) | 155 |
| EcoRV | GATATC | 2 cut(s) | 307, 778 |
| EcoT14I | CCWWGG | 3 cut(s) | 528, 597, 717 |
| ErhI | CCWWGG | 3 cut(s) | 528, 597, 717 |
| FaeI | CATG | 6 cut(s) | 60, 131, 316, 502, 601, 721 |
| FaqI | GGGAC | 1 cut(s) | 528 |
| FatI | CATG | 6 cut(s) | 56, 127, 312, 498, 597, 717 |
| Fnu4HI | GCNGC | 3 cut(s) | 567, 657, 811 |
| FokI | GGATG | 3 cut(s) | 296, 309, 476 |
| Fsp4HI | GCNGC | 3 cut(s) | 567, 657, 811 |
| FspBI | CTAG | 2 cut(s) | 429, 629 |
| GlaI | GCGC | 1 cut(s) | 558 |
| GluI | GCNGC | 3 cut(s) | 567, 657, 811 |
| HaeIII | GGCC | 1 cut(s) | 716 |
| HapII | CCGG | 1 cut(s) | 410 |
| HhaI | GCGC | 1 cut(s) | 559 |
| Hin1II | CATG | 6 cut(s) | 60, 131, 316, 502, 601, 721 |
| Hin6I | GCGC | 1 cut(s) | 557 |
| HinP1I | GCGC | 1 cut(s) | 557 |
| HindIII | AAGCTT | 1 cut(s) | 615 |
| HinfI | GANTC | 4 cut(s) | 8, 53, 446, 605 |
| HpaII | CCGG | 1 cut(s) | 410 |
| HphI | GGTGA | 2 cut(s) | 362, 785 |
| Hpy166II | GTNNAC | 1 cut(s) | 158 |
| Hpy188I | TCNGA | 3 cut(s) | 81, 439, 799 |
| Hpy188III | TCNNGA | 2 cut(s) | 302, 313 |
| Hpy8I | GTNNAC | 1 cut(s) | 158 |
| HpyAV | CCTTC | 3 cut(s) | 538, 547, 664 |
| HpyCH4III | ACNGT | 1 cut(s) | 73 |
| HpyCH4V | TGCA | 4 cut(s) | 142, 236, 566, 704 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 148, 533, 563, 593, 816 |
| HpyF3I | CTNAG | 1 cut(s) | 192 |
| Hsp92II | CATG | 6 cut(s) | 60, 131, 316, 502, 601, 721 |
| HspAI | GCGC | 1 cut(s) | 557 |
| Kzo9I | GATC | 2 cut(s) | 81, 385 |
| LmnI | GCTCC | 1 cut(s) | 34 |
| LpnPI | CCDG | 1 cut(s) | 423 |
| Lsp1109I | GCAGC | 3 cut(s) | 578, 643, 822 |
| LweI | GCATC | 3 cut(s) | 422, 553, 691 |
| MaeI | CTAG | 2 cut(s) | 429, 629 |
| MalI | GATC | 2 cut(s) | 83, 387 |
| MbiI | CCGCTC | 1 cut(s) | 267 |
| MboI | GATC | 2 cut(s) | 81, 385 |
| MboII | GAAGA | 6 cut(s) | 301, 553, 646, 659, 698, 710 |
| MfeI | CAATTG | 2 cut(s) | 44, 453 |
| MflI | RGATCY | 1 cut(s) | 385 |
| MlsI | TGGCCA | 1 cut(s) | 716 |
| MluNI | TGGCCA | 1 cut(s) | 716 |
| MlyI | GAGTC | 1 cut(s) | 455 |
| MnlI | CCTC | 7 cut(s) | 25, 115, 186, 280, 505, 682, 837 |
| Mox20I | TGGCCA | 1 cut(s) | 716 |
| MroXI | GAANNNNTTC | 1 cut(s) | 123 |
| MscI | TGGCCA | 1 cut(s) | 716 |
| MseI | TTAA | 2 cut(s) | 363, 838 |
| MslI | CAYNNNNRTG | 1 cut(s) | 61 |
| Msp20I | TGGCCA | 1 cut(s) | 716 |
| MspA1I | CMGCKG | 1 cut(s) | 813 |
| MspI | CCGG | 1 cut(s) | 410 |
| MunI | CAATTG | 2 cut(s) | 44, 453 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 148, 533, 563, 593, 816 |
| NcoI | CCATGG | 2 cut(s) | 597, 717 |
| NdeII | GATC | 2 cut(s) | 81, 385 |
| NlaIII | CATG | 6 cut(s) | 60, 131, 316, 502, 601, 721 |
| NlaIV | GGNNCC | 2 cut(s) | 271, 387 |
| NmeAIII | GCCGAG | 1 cut(s) | 528 |
| NspV | TTCGAA | 1 cut(s) | 199 |
| PagI | TCATGA | 1 cut(s) | 312 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 77 |
| PdmI | GAANNNNTTC | 1 cut(s) | 123 |
| PfeI | GAWTC | 3 cut(s) | 8, 53, 605 |
| PkrI | GCNGC | 3 cut(s) | 568, 658, 812 |
| PleI | GAGTC | 1 cut(s) | 454 |
| PpsI | GAGTC | 1 cut(s) | 454 |
| PspN4I | GGNNCC | 2 cut(s) | 271, 387 |
| PspPI | GGNCC | 1 cut(s) | 155 |
| PsuI | RGATCY | 1 cut(s) | 385 |
| RsaI | GTAC | 1 cut(s) | 16 |
| RsaNI | GTAC | 1 cut(s) | 15 |
| RseI | CAYNNNNRTG | 1 cut(s) | 61 |
| SaqAI | TTAA | 2 cut(s) | 363, 838 |
| SatI | GCNGC | 3 cut(s) | 567, 657, 811 |
| Sau3AI | GATC | 2 cut(s) | 81, 385 |
| Sau96I | GGNCC | 1 cut(s) | 155 |
| SchI | GAGTC | 1 cut(s) | 455 |
| SetI | ASST | 7 cut(s) | 157, 184, 497, 619, 630, 675, 829 |
| SfaNI | GCATC | 3 cut(s) | 422, 553, 691 |
| SfuI | TTCGAA | 1 cut(s) | 199 |
| SinI | GGWCC | 1 cut(s) | 155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 61 |
| SmlI | CTYRAG | 2 cut(s) | 177, 612 |
| SmoI | CTYRAG | 2 cut(s) | 177, 612 |
| SpeI | ACTAGT | 1 cut(s) | 428 |
| SsiI | CCGC | 2 cut(s) | 267, 813 |
| SspMI | CTAG | 2 cut(s) | 429, 629 |
| StyI | CCWWGG | 3 cut(s) | 528, 597, 717 |
| TaaI | ACNGT | 1 cut(s) | 73 |
| TaqI | TCGA | 4 cut(s) | 30, 199, 422, 834 |
| TfiI | GAWTC | 3 cut(s) | 8, 53, 605 |
| Tru1I | TTAA | 2 cut(s) | 363, 838 |
| Tru9I | TTAA | 2 cut(s) | 363, 838 |
| TseI | GCWGC | 3 cut(s) | 566, 656, 810 |
| TspDTI | ATGAA | 5 cut(s) | 45, 116, 301, 329, 483 |
| VpaK11BI | GGWCC | 1 cut(s) | 155 |
| XapI | RAATTY | 4 cut(s) | 39, 213, 341, 680 |
| XmnI | GAANNNNTTC | 1 cut(s) | 123 |
| XspI | CTAG | 2 cut(s) | 429, 629 |