Rmu_sc0000536.1_g000032

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000536.1
OG0000206
Physical Location & Seq
Forward (+)
144443 .. 148426
3984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000536.1_g000032.1.cds

Sequence Viewer

Length: 1320 bp
atgggatcccggcggtgcgctaccgatcatagtcggcgattggtggaagagaggtcggatgcatgcacgatggggattgctgttgctgggtttcacttggatctggttcaggtggcgacattgacatcggccaaggctggcttctgcgtccttgcacggctggtgttgggctcacaccaatatgttgggcaaaacattcccatgggtttggatttgggacccgggtttgattggtctgctgatcttctgcatgcccggatcacaaattctgattgttgggtctacaattttcaaggtcatgacaatggttccgttgttggtaattatcttgaggatgatgaggattcaccttctgaatttgctagtttttctagaaaagtttcagagcagaggctgggcgtccgagcccgaaagaccgaggacccgacccgaactgaggaaaaaagcccgattcgggaccgaaagcccgaaccgacccgaatattatatctgttgccacatatcagcctccctctctctcgataccatctcagattctcagccgcagctgcccagaaatctccctctcactctctcagttccttcctcacggtctcacccttctctctctgtctctccattcagtaccagctgctgctccactgtccgtctccgaaatcccctccgccagcgacatgcaccgtgattggattagaagctcccgatgtgcgcctccgccatttagcctttctattctcccgtcgctggcgccgtgatgccgtcaccgctctgcacaactcagttctgtacttcgtaaacaccttggatatccaagccgctgccttgtggggtgtcgccgccggccccaccgctctttgggtcgtccaggtcagtaaagctctcatctttttgcctattttagatctggctagtttctccgaaaacgagtctccaattgacttggatgatgaaatagttttagagacaccatcaagctccatgccgagaccaataggacaaaagagagccaaggaagcaaagaaaaaaggaaagaaggcgcacgatgcagcagaaagtatggctcttgctattcaagccatggtagaatcaactcaagcttctgttgagctagtgaggaaaagaaacgaagaaatggctgctcacacaaagaaggtatttgaatttgaagaggcgaaagaagatgcaagaattatggccatggatactaattccatgacaccacaatcaaaggcttggtggaaaaagaaaaagggtgatatcgtagcaaaaacaatgtctgatggtggtagcagcggtagctacatacctcaattcgactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

439

Amino Acids

48.54

Weight (kDa)

8.09

Isoelectric Point (pI)

53.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000206)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04631 FvH4_1g14871 FvH4_3g18183 FvH4_4g07540 FvH4_4g11860 FvH4_4g12252 FvH4_4g14180 FvH4_4g24130 FvH4_5g15962 FvH4_5g21900 FvH4_5g34730 FvH4_5g38071 FvH4_6g38832 FvH4_7g00330 FvH4_7g07670 FvH4_7g08131 FvH4_7g29320
malus_domestica MD02G1308300.v1.1 MD03G1238900.v1.1 MD04G1103900.v1.1 MD08G1183800.v1.1 MD11G1096700.v1.1 MD11G1261300.v1.1 MD12G1048200.v1.1
pyrus_communis pycom01g07190 pycom01g17380 pycom02g05990 pycom02g17700 pycom02g17760 pycom02g17780 pycom03g02490 pycom03g07080 pycom03g08120 pycom03g11190 pycom03g11870 pycom03g16280 pycom04g02290 pycom04g05180 pycom04g07420 pycom04g10470 pycom04g10920 pycom04g11540 pycom05g00050 pycom05g04730 pycom05g04740 pycom05g07820 pycom05g13620 pycom05g19310 pycom06g03270 pycom06g08270 pycom06g09330 pycom06g20220 pycom07g08390 pycom07g22600 pycom08g09490 pycom08g13210 pycom08g14280 pycom08g15750 pycom08g18990 pycom08g21650 pycom09g01710 pycom09g03180 pycom09g09280 pycom09g10200 pycom09g11120 pycom09g11440 pycom10g02740 pycom10g07660 pycom10g09060 pycom10g20040 pycom111g01670 pycom11g08660 pycom11g09000 pycom11g12870 pycom11g14470 pycom11g15540 pycom11g19420 pycom11g22090 pycom12g10660 pycom12g11050 pycom12g12790 pycom12g14250 pycom13g14570 pycom13g26080 pycom14g00240 pycom15g10960 pycom15g24390 pycom15g31880 pycom15g32630 pycom15g33590 pycom16g07100 pycom16g09710 pycom16g20130 pycom16g21120 pycom17g02320 pycom17g11710 pycom17g14970 pycom17g19270 pycom17g22280 pycom17g23050 pycom17g25230
rosa_chinensis RchiOBHm_Chr7g0200361 RchiOBHm_Chr7g0226641
rosa_laevigata RLG00000030820
rosa_multiflora Rmu_sc0000129.1_g000009 Rmu_sc0000536.1_g000032 Rmu_sc0000663.1_g000015 Rmu_sc0000758.1_g000016 Rmu_sc0000857.1_g000019 Rmu_sc0001004.1_g000011 Rmu_sc0001096.1_g000018 Rmu_sc0001715.1_g000021 Rmu_sc0001781.1_g000006 Rmu_sc0002467.1_g000014 Rmu_sc0003018.1_g000003 Rmu_sc0003902.1_g000020 Rmu_sc0004048.1_g000013 Rmu_sc0005725.1_g000016 Rmu_sc0007871.1_g000002 Rmu_sc0008009.1_g000003 Rmu_sc0008223.1_g000013 Rmu_sc0008528.1_g000009 Rmu_sc0010621.1_g000003 Rmu_sc0010856.1_g000004 Rmu_sc0013113.1_g000005 Rmu_sc0016149.1_g000007 Rmu_ssc0000027.1_g000004 Rmu_ssc0000201.1_g000019
rosa_roxburghii Rroxscaffold_2G00109130 Rroxscaffold_3G00232550 Rroxscaffold_7G00176580
rosa_rugosa Rorug03G0276400 Rorug03G0276400
rosa_samantha Rh1CG005700 Rh2BG308900 Rh3BG239200 Rh4DG043100 Rh5AG498300 Rh5CG377400 Rh7BG373200 Rh7DG189000
rosa_wichuraiana Rw0G006950 Rw1G019470 Rw1G027440 Rw2G041930 Rw3G022370 Rw4G013430 Rw4G023110 Rw5G008510 Rw5G043680 Rw6G021680 Rw7G039660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 747
AccBSI CCGCTC 2 cut(s) 767, 851
AccI GTMKAC 1 cut(s) 282
AciI CCGC 9 cut(s) 13, 543, 665, 715, 765, 816, 837, 849, 1293
AclWI GGATC 3 cut(s) 13, 108, 266
AcoI YGGCCR 2 cut(s) 129, 1194
AcsI RAATTY 3 cut(s) 265, 356, 1160
AcyI GRCGYC 2 cut(s) 399, 748
AfaI GTAC 2 cut(s) 626, 788
AfiI CCNNNNNNNGG 4 cut(s) 436, 454, 744, 855
AgsI TTSAA 4 cut(s) 293, 1073, 1160, 1166
AjnI CCWGG 1 cut(s) 864
AjuI GAANNNNNNNTTGG 2 cut(s) 125, 157
AluBI AGCT 8 cut(s) 548, 631, 698, 878, 975, 1097, 1108, 1299
AluI AGCT 8 cut(s) 548, 631, 698, 878, 975, 1097, 1108, 1299
Alw26I GTCTC 6 cut(s) 598, 617, 654, 933, 956, 979
AlwI GGATC 3 cut(s) 13, 108, 266
AlwNI CAGNNNCTG 2 cut(s) 394, 634
Ama87I CYCGRG 1 cut(s) 221
AoxI GGCC 3 cut(s) 129, 841, 1194
ApeKI GCWGC 8 cut(s) 545, 548, 631, 634, 818, 1046, 1136, 1290
ApoI RAATTY 3 cut(s) 265, 356, 1160
ArsI GACNNNNNNTTYG 2 cut(s) 1259, 1291
Asp700I GAANNNNTTC 1 cut(s) 379
AspLEI GCGC 4 cut(s) 20, 711, 750, 1039
AspS9I GGNCC 4 cut(s) 218, 421, 457, 842
AsuC2I CCSGG 4 cut(s) 10, 222, 223, 256
AsuHPI GGTGA 4 cut(s) 339, 588, 754, 1265
AvaI CYCGRG 1 cut(s) 221
AvaII GGWCC 3 cut(s) 218, 421, 457
BalI TGGCCA 1 cut(s) 1196
BamHI GGATCC 1 cut(s) 5
BanI GGYRCC 1 cut(s) 747
BanII GRGCYC 2 cut(s) 173, 409
BbvI GCAGC 8 cut(s) 535, 557, 618, 621, 805, 1058, 1123, 1302
BccI CCATC 4 cut(s) 64, 534, 976, 1274
BceAI ACGGC 3 cut(s) 173, 735, 743
BciT130I CCWGG 1 cut(s) 866
BciVI GTATCC 1 cut(s) 1195
BcnI CCSGG 4 cut(s) 10, 222, 223, 256
BcoDI GTCTC 6 cut(s) 598, 617, 654, 933, 956, 979
BfaI CTAG 4 cut(s) 363, 372, 909, 1109
BfoI RGCGCY 1 cut(s) 751
BfuI GTATCC 1 cut(s) 1195
BglII AGATCT 1 cut(s) 901
Bme1390I CCNGG 5 cut(s) 10, 222, 223, 256, 866
Bme18I GGWCC 3 cut(s) 218, 421, 457
BmeT110I CYCGRG 1 cut(s) 221
BmgT120I GGNCC 4 cut(s) 218, 421, 457, 842
BmiI GGNNCC 8 cut(s) 7, 219, 220, 310, 423, 458, 749, 844
BmrFI CCNGG 5 cut(s) 10, 222, 223, 256, 866
BmsI GCATC 4 cut(s) 49, 745, 1033, 1171
BpuEI CTTGAG 2 cut(s) 350, 1077
BpuMI CCSGG 4 cut(s) 10, 222, 223, 256
BsaHI GRCGYC 2 cut(s) 399, 748
BsaI GGTCTC 2 cut(s) 598, 979
BsaJI CCNNGG 8 cut(s) 132, 201, 221, 417, 801, 1008, 1077, 1197
Bsc4I CCNNNNNNNGG 4 cut(s) 436, 454, 744, 855
Bse118I RCCGGY 1 cut(s) 839
BseBI CCWGG 1 cut(s) 866
BseDI CCNNGG 8 cut(s) 132, 201, 221, 417, 801, 1008, 1077, 1197
BseGI GGATG 3 cut(s) 64, 340, 949
BseLI CCNNNNNNNGG 4 cut(s) 436, 454, 744, 855
BseMII CTCAG 5 cut(s) 426, 544, 552, 589, 792
BseXI GCAGC 8 cut(s) 535, 557, 618, 621, 805, 1058, 1123, 1302
BseYI CCCAGC 2 cut(s) 86, 394
BsgI GTGCAG 1 cut(s) 755
BshFI GGCC 3 cut(s) 131, 843, 1196
BshNI GGYRCC 1 cut(s) 747
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 4 cut(s) 10, 222, 256, 840
BslFI GGGAC 2 cut(s) 231, 470
BslI CCNNNNNNNGG 4 cut(s) 436, 454, 744, 855
BsmAI GTCTC 6 cut(s) 598, 617, 654, 933, 956, 979
BsmBI CGTCTC 1 cut(s) 654
BsmFI GGGAC 2 cut(s) 231, 470
BsnI GGCC 3 cut(s) 131, 843, 1196
Bso31I GGTCTC 2 cut(s) 598, 979
BsoBI CYCGRG 1 cut(s) 221
Bsp1286I GDGCHC 2 cut(s) 173, 409
Bsp143I GATC 6 cut(s) 5, 25, 100, 241, 258, 901
Bsp19I CCATGG 3 cut(s) 201, 1077, 1197
BspACI CCGC 9 cut(s) 13, 543, 665, 715, 765, 816, 837, 849, 1293
BspANI GGCC 3 cut(s) 131, 843, 1196
BspCNI CTCAG 5 cut(s) 427, 543, 551, 588, 791
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 8 cut(s) 7, 219, 220, 310, 423, 458, 749, 844
BspPI GGATC 3 cut(s) 13, 108, 266
BspT107I GGYRCC 1 cut(s) 747
BspTNI GGTCTC 2 cut(s) 598, 979
BsrBI CCGCTC 2 cut(s) 767, 851
BsrFI RCCGGY 1 cut(s) 839
BssAI RCCGGY 1 cut(s) 839
BssECI CCNNGG 8 cut(s) 132, 201, 221, 417, 801, 1008, 1077, 1197
BssMI GATC 6 cut(s) 5, 25, 100, 241, 258, 901
BssNI GRCGYC 2 cut(s) 399, 748
BssT1I CCWWGG 6 cut(s) 132, 201, 801, 1008, 1077, 1197
Bst2UI CCWGG 1 cut(s) 866
Bst4CI ACNGT 3 cut(s) 592, 644, 682
Bst6I CTCTTC 2 cut(s) 42, 1161
BstACI GRCGYC 2 cut(s) 399, 748
BstC8I GCNNGC 6 cut(s) 64, 139, 252, 669, 746, 841
BstDEI CTNAG 5 cut(s) 435, 530, 538, 575, 778
BstDSI CCRYGG 3 cut(s) 201, 1077, 1197
BstF5I GGATG 3 cut(s) 64, 340, 949
BstH2I RGCGCY 1 cut(s) 751
BstHHI GCGC 4 cut(s) 20, 711, 750, 1039
BstKTI GATC 6 cut(s) 8, 28, 103, 244, 261, 904
BstMAI GTCTC 6 cut(s) 598, 617, 654, 933, 956, 979
BstMBI GATC 6 cut(s) 5, 25, 100, 241, 258, 901
BstMWI GCNNNNNNNGC 6 cut(s) 548, 764, 1013, 1043, 1073, 1296
BstNI CCWGG 1 cut(s) 866
BstNSI RCATGY 3 cut(s) 66, 254, 678
BstSCI CCNGG 5 cut(s) 8, 220, 221, 254, 864
BstV1I GCAGC 8 cut(s) 535, 557, 618, 621, 805, 1058, 1123, 1302
BstX2I RGATCY 3 cut(s) 5, 100, 901
BstXI CCANNNNNNTGG 2 cut(s) 185, 208
BstYI RGATCY 3 cut(s) 5, 100, 901
BsuI GTATCC 1 cut(s) 1195
BsuRI GGCC 3 cut(s) 131, 843, 1196
BtgI CCRYGG 3 cut(s) 201, 1077, 1197
BtsCI GGATG 3 cut(s) 64, 340, 949
BtsIMutI CAGTG 1 cut(s) 640
Cac8I GCNNGC 6 cut(s) 64, 139, 252, 669, 746, 841
CaiI CAGNNNCTG 2 cut(s) 394, 634
CciI TCATGA 1 cut(s) 298
CfoI GCGC 4 cut(s) 20, 711, 750, 1039
Cfr10I RCCGGY 1 cut(s) 839
Cfr13I GGNCC 4 cut(s) 218, 421, 457, 842
Cfr9I CCCGGG 1 cut(s) 221
CseI GACGC 2 cut(s) 136, 388
Csp6I GTAC 2 cut(s) 625, 787
CviAII CATG 9 cut(s) 63, 202, 251, 299, 675, 979, 1078, 1198, 1213
CviQI GTAC 2 cut(s) 625, 787
DdeI CTNAG 5 cut(s) 435, 530, 538, 575, 778
DinI GGCGCC 1 cut(s) 749
DpnI GATC 6 cut(s) 7, 27, 102, 243, 260, 903
DpnII GATC 6 cut(s) 5, 25, 100, 241, 258, 901
EaeI YGGCCR 2 cut(s) 129, 1194
Eam1104I CTCTTC 2 cut(s) 42, 1161
EarI CTCTTC 2 cut(s) 42, 1161
EciI GGCGGA 2 cut(s) 654, 704
Eco130I CCWWGG 6 cut(s) 132, 201, 801, 1008, 1077, 1197
Eco24I GRGCYC 2 cut(s) 173, 409
Eco31I GGTCTC 2 cut(s) 598, 979
Eco32I GATATC 2 cut(s) 808, 1258
Eco47I GGWCC 3 cut(s) 218, 421, 457
Eco88I CYCGRG 1 cut(s) 221
EcoO109I RGGNCCY 2 cut(s) 218, 421
EcoRII CCWGG 1 cut(s) 864
EcoRV GATATC 2 cut(s) 808, 1258
EcoT14I CCWWGG 6 cut(s) 132, 201, 801, 1008, 1077, 1197
EcoT22I ATGCAT 1 cut(s) 64
EcoT38I GRGCYC 2 cut(s) 173, 409
EgeI GGCGCC 1 cut(s) 749
EheI GGCGCC 1 cut(s) 749
ErhI CCWWGG 6 cut(s) 132, 201, 801, 1008, 1077, 1197
Esp3I CGTCTC 1 cut(s) 654
FaeI CATG 9 cut(s) 66, 205, 254, 302, 678, 982, 1081, 1201, 1216
FalI AAGNNNNNCTT 2 cut(s) 125, 157
FaqI GGGAC 2 cut(s) 231, 470
FatI CATG 9 cut(s) 62, 201, 250, 298, 674, 978, 1077, 1197, 1212
FblI GTMKAC 1 cut(s) 282
FokI GGATG 3 cut(s) 71, 347, 956
FriOI GRGCYC 2 cut(s) 173, 409
FspBI CTAG 4 cut(s) 363, 372, 909, 1109
GlaI GCGC 4 cut(s) 19, 710, 749, 1038
GsaI CCCAGC 2 cut(s) 90, 398
HaeII RGCGCY 1 cut(s) 751
HaeIII GGCC 3 cut(s) 131, 843, 1196
HapII CCGG 4 cut(s) 10, 222, 256, 840
HgaI GACGC 2 cut(s) 136, 388
HhaI GCGC 4 cut(s) 20, 711, 750, 1039
Hin1I GRCGYC 2 cut(s) 399, 748
Hin1II CATG 9 cut(s) 66, 205, 254, 302, 678, 982, 1081, 1201, 1216
Hin6I GCGC 4 cut(s) 18, 709, 748, 1037
HinP1I GCGC 4 cut(s) 18, 709, 748, 1037
HindIII AAGCTT 1 cut(s) 1095
HinfI GANTC 5 cut(s) 344, 451, 534, 926, 1085
HpaII CCGG 4 cut(s) 10, 222, 256, 840
HphI GGTGA 4 cut(s) 339, 588, 754, 1265
Hpy166II GTNNAC 2 cut(s) 283, 796
Hpy188I TCNGA 9 cut(s) 58, 271, 355, 385, 404, 533, 654, 919, 1279
Hpy188III TCNNGA 6 cut(s) 299, 329, 372, 455, 519, 701
Hpy8I GTNNAC 2 cut(s) 283, 796
Hpy99I CGWCG 1 cut(s) 744
HpyAV CCTTC 5 cut(s) 360, 592, 610, 1027, 1144
HpyCH4III ACNGT 3 cut(s) 592, 644, 682
HpyCH4V TGCA 8 cut(s) 62, 66, 155, 250, 678, 772, 1046, 1184
HpyF10VI GCNNNNNNNGC 6 cut(s) 548, 764, 1013, 1043, 1073, 1296
HpyF3I CTNAG 5 cut(s) 435, 530, 538, 575, 778
Hsp92I GRCGYC 2 cut(s) 399, 748
Hsp92II CATG 9 cut(s) 66, 205, 254, 302, 678, 982, 1081, 1201, 1216
HspAI GCGC 4 cut(s) 18, 709, 748, 1037
KasI GGCGCC 1 cut(s) 747
KflI GGGWCCC 1 cut(s) 218
KroI GCCGGC 1 cut(s) 839
KroNI GCCGGC 1 cut(s) 841
Kzo9I GATC 6 cut(s) 5, 25, 100, 241, 258, 901
LmnI GCTCC 3 cut(s) 642, 703, 980
Lsp1109I GCAGC 8 cut(s) 535, 557, 618, 621, 805, 1058, 1123, 1302
LweI GCATC 4 cut(s) 49, 745, 1033, 1171
MaeI CTAG 4 cut(s) 363, 372, 909, 1109
MaeIII GTNAC 1 cut(s) 760
MalI GATC 6 cut(s) 7, 27, 102, 243, 260, 903
MbiI CCGCTC 2 cut(s) 767, 851
MboI GATC 6 cut(s) 5, 25, 100, 241, 258, 901
MboII GAAGA 5 cut(s) 59, 236, 1139, 1178, 1190
MfeI CAATTG 1 cut(s) 933
MflI RGATCY 3 cut(s) 5, 100, 901
MhlI GDGCHC 2 cut(s) 173, 409
MlsI TGGCCA 1 cut(s) 1196
MluCI AATT 9 cut(s) 265, 286, 322, 356, 933, 1160, 1188, 1207, 1310
MluNI TGGCCA 1 cut(s) 1196
Mly113I GGCGCC 1 cut(s) 748
MlyI GAGTC 1 cut(s) 935
MmeI TCCRAC 1 cut(s) 36
Mox20I TGGCCA 1 cut(s) 1196
Mph1103I ATGCAT 1 cut(s) 64
MroNI GCCGGC 1 cut(s) 839
MroXI GAANNNNTTC 1 cut(s) 379
MscI TGGCCA 1 cut(s) 1196
MslI CAYNNNNRTG 3 cut(s) 180, 200, 303
Msp20I TGGCCA 1 cut(s) 1196
MspA1I CMGCKG 4 cut(s) 548, 631, 818, 1293
MspI CCGG 4 cut(s) 10, 222, 256, 840
MspR9I CCNGG 5 cut(s) 10, 222, 223, 256, 866
MunI CAATTG 1 cut(s) 933
MvaI CCWGG 1 cut(s) 866
MwoI GCNNNNNNNGC 6 cut(s) 548, 764, 1013, 1043, 1073, 1296
NaeI GCCGGC 1 cut(s) 841
NarI GGCGCC 1 cut(s) 748
NciI CCSGG 4 cut(s) 10, 222, 223, 256
NcoI CCATGG 3 cut(s) 201, 1077, 1197
NdeII GATC 6 cut(s) 5, 25, 100, 241, 258, 901
NgoMIV GCCGGC 1 cut(s) 839
NlaIII CATG 9 cut(s) 66, 205, 254, 302, 678, 982, 1081, 1201, 1216
NlaIV GGNNCC 8 cut(s) 7, 219, 220, 310, 423, 458, 749, 844
NmeAIII GCCGAG 1 cut(s) 1008
NmuCI GTSAC 1 cut(s) 760
NsiI ATGCAT 1 cut(s) 64
NspI RCATGY 3 cut(s) 66, 254, 678
PaeI GCATGC 2 cut(s) 66, 254
PagI TCATGA 1 cut(s) 298
PcsI WCGNNNNNNNCGW 1 cut(s) 748
PdiI GCCGGC 1 cut(s) 841
PdmI GAANNNNTTC 1 cut(s) 379
PfeI GAWTC 4 cut(s) 344, 451, 534, 1085
PleI GAGTC 1 cut(s) 934
PluTI GGCGCC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 934
PpuMI RGGWCCY 2 cut(s) 218, 421
Psp5II RGGWCCY 2 cut(s) 218, 421
Psp6I CCWGG 1 cut(s) 864
PspFI CCCAGC 2 cut(s) 86, 394
PspGI CCWGG 1 cut(s) 864
PspN4I GGNNCC 8 cut(s) 7, 219, 220, 310, 423, 458, 749, 844
PspPI GGNCC 4 cut(s) 218, 421, 457, 842
PspPPI RGGWCCY 2 cut(s) 218, 421
PstNI CAGNNNCTG 2 cut(s) 394, 634
PsuI RGATCY 3 cut(s) 5, 100, 901
PvuII CAGCTG 2 cut(s) 548, 631
RsaI GTAC 2 cut(s) 626, 788
RsaNI GTAC 2 cut(s) 625, 787
RseI CAYNNNNRTG 3 cut(s) 180, 200, 303
Sau3AI GATC 6 cut(s) 5, 25, 100, 241, 258, 901
Sau96I GGNCC 4 cut(s) 218, 421, 457, 842
SchI GAGTC 1 cut(s) 935
ScrFI CCNGG 5 cut(s) 10, 222, 223, 256, 866
SduI GDGCHC 2 cut(s) 173, 409
SfaNI GCATC 4 cut(s) 49, 745, 1033, 1171
SfoI GGCGCC 1 cut(s) 749
SinI GGWCC 3 cut(s) 218, 421, 457
SmaI CCCGGG 1 cut(s) 223
SmiMI CAYNNNNRTG 3 cut(s) 180, 200, 303
SmlI CTYRAG 2 cut(s) 329, 1092
SmoI CTYRAG 2 cut(s) 329, 1092
SphI GCATGC 2 cut(s) 66, 254
Sse9I AATT 9 cut(s) 265, 286, 322, 356, 933, 1160, 1188, 1207, 1310
SsiI CCGC 9 cut(s) 13, 543, 665, 715, 765, 816, 837, 849, 1293
SspDI GGCGCC 1 cut(s) 747
SspI AATATT 1 cut(s) 483
SspMI CTAG 4 cut(s) 363, 372, 909, 1109
StyD4I CCNGG 5 cut(s) 8, 220, 221, 254, 864
StyI CCWWGG 6 cut(s) 132, 201, 801, 1008, 1077, 1197
TaaI ACNGT 3 cut(s) 592, 644, 682
TaqI TCGA 2 cut(s) 520, 1314
TaqII GACCGA 2 cut(s) 431, 474
TasI AATT 9 cut(s) 265, 286, 322, 356, 933, 1160, 1188, 1207, 1310
TatI WGTACW 1 cut(s) 786
TauI GCSGC 3 cut(s) 545, 818, 839
TfiI GAWTC 4 cut(s) 344, 451, 534, 1085
TscAI CASTG 1 cut(s) 647
TseFI GTSAC 1 cut(s) 760
TseI GCWGC 8 cut(s) 545, 548, 631, 634, 818, 1046, 1136, 1290
Tsp45I GTSAC 1 cut(s) 760
TspDTI ATGAA 1 cut(s) 963
TspGWI ACGGA 2 cut(s) 301, 636
TspMI CCCGGG 1 cut(s) 221
TspRI CASTG 1 cut(s) 647
VpaK11BI GGWCC 3 cut(s) 218, 421, 457
XapI RAATTY 3 cut(s) 265, 356, 1160
XbaI TCTAGA 1 cut(s) 371
XceI RCATGY 3 cut(s) 66, 254, 678
XmaI CCCGGG 1 cut(s) 221
XmiI GTMKAC 1 cut(s) 282
XmnI GAANNNNTTC 1 cut(s) 379
XspI CTAG 4 cut(s) 363, 372, 909, 1109
Zsp2I ATGCAT 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.