Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0000206

Physical Location & Seq

Genomic Coordinates Forward (+)

2046087 .. 2048380

Gene Structure 2294 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g02290.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGATTGATATATCTTTGAGCATGACTGGCATATCTATACATACGTATATATGTTTATTTTCTGGGAAACTATATTTGTTTTACGGCGAGGGGTTAGTATATTCAAAGAGAAAAGAAGGTGTGGTGACTACGAGGAAATTCAACGGTGTTCTGACAGAATGGCCAAAAATTTGGACTCACCTTTGGGTGTTTCATCTTAGAAATTGTATCTTTAAAGCTTCCGTACTGTGCAAATGGTTACGTCACTCTCACGTGACGGCCAGCATGCCCTCCTTCGGGACGGGGTGTGTCAAGGCGCGTGCGCTTCAAGTGAGCGTCGACCGACACAAATTCAAAGTTGGGGTCCTCGACGCTTTTCTGAGATGTTACCGTTGGGAAGGCCACGTGATTTCCCCATGTCCCTTGGATTTCAATGACAACATTTTATGGACCGTTGGATTTCCAATGATCAACGGTCTACGTTATTCACTTACCGTTGTGCCATGTGGCACAATCTGGAGTGTTGGAATTCAATTTTTTTTTAATCCAAAGGCAGAGATTAATTATGTGAATAAAAAATTAATAAAAATCCGGAAAATAAAATTTGAAAAATTAAAAAAAAAAAAAATTTTACTTTTCTATAAATACCTTCTCATTATCTTCTACCTTACACCACAATTTCATATTTTGTCAACTAGTTTCAACCACATTCCTATCTTTCTCTCAAAGCTTATTGAAGATGTAACGTTGTGTACTAACTTGGTTGAAGTTACTTATGACCCGATTACGGGTAATGAGATGCAGTTGCGAGAAATGTGGAGTCTTATTCATGCCAATTATCTTGAGAAAATTGGTGGGAAAAGAACCAAAGAATCGATGTCCAAGGCCTTGGCACAAGCTAGTAGTAATCTTCAAAGTGGGAAAAATTTAGCGGATCAAGTAACAATATATTATTTGTTTGTTTGTACTATACCCAAATTTACATTACCTACTTTGATTATAATTATTTATTCTCCCGTATTGTGTAGGCACTTCAAGCACAAGCTTGGTATAATGCCAAAACCAAAAGCAAAAACAAAGCATTCAACCGGTGGGAATGATGGAATATTGTCAAAAGATTGTCCTAAATTTAGAGTTATGCCTGTCGGTCTAGAAGTTTTCTTGAATAGCACCCCTCTACACTCTACGCCAGATCATGCCTCACATGTTCATGAAGACAACGCAGAAGAAGTGCCCGAAATGCCCCTTGAACAAGCGTCGGTGTCAACCCGTTATCCAATTAGGCATCAAGGTGAATTGACTTTGGCGCTGGAAATGGCTAAATTTAAGGCTGATAAGGCTAGAGAGAAGCCAAAAACTGCAGTTGTTGAAAGAGAATTTCAAGTTAGAGAAGAAATAATGGCTCAACGAGATCGTGATATTATGAACACGAGGCGTGCAAGAGAAGTGAGAGCAAGAGTAGATGGTCCTAGCACGACAAGAGAAAATAATCCTAGCACCAATTTTCCAATCACTTTGTTTGTAATCGGAGCCCATAATTTTCCAATAACTTTGAGTTTTATTGAATTTAGTACTTTATTTAAAGTAAAAGTAAATTTATTTAATTTGTACATAAACATACCAAATAATAAAAAAAAACTCACTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0071704 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C TPR_2 TPR_8

Protein Analysis

543

Amino Acids

62.25

Weight (kDa)

9.67

Isoelectric Point (pI)

32.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000206)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04631 FvH4_1g14871 FvH4_3g18183 FvH4_4g07540 FvH4_4g11860 FvH4_4g12252 FvH4_4g14180 FvH4_4g24130 FvH4_5g15962 FvH4_5g21900 FvH4_5g34730 FvH4_5g38071 FvH4_6g38832 FvH4_7g00330 FvH4_7g07670 FvH4_7g08131 FvH4_7g29320
malus_domestica	MD02G1308300.v1.1 MD03G1238900.v1.1 MD04G1103900.v1.1 MD08G1183800.v1.1 MD11G1096700.v1.1 MD11G1261300.v1.1 MD12G1048200.v1.1
pyrus_communis	pycom01g07190 pycom01g17380 pycom02g05990 pycom02g17700 pycom02g17760 pycom02g17780 pycom03g02490 pycom03g07080 pycom03g08120 pycom03g11190 pycom03g11870 pycom03g16280 pycom04g02290 pycom04g05180 pycom04g07420 pycom04g10470 pycom04g10920 pycom04g11540 pycom05g00050 pycom05g04730 pycom05g04740 pycom05g07820 pycom05g13620 pycom05g19310 pycom06g03270 pycom06g08270 pycom06g09330 pycom06g20220 pycom07g08390 pycom07g22600 pycom08g09490 pycom08g13210 pycom08g14280 pycom08g15750 pycom08g18990 pycom08g21650 pycom09g01710 pycom09g03180 pycom09g09280 pycom09g10200 pycom09g11120 pycom09g11440 pycom10g02740 pycom10g07660 pycom10g09060 pycom10g20040 pycom111g01670 pycom11g08660 pycom11g09000 pycom11g12870 pycom11g14470 pycom11g15540 pycom11g19420 pycom11g22090 pycom12g10660 pycom12g11050 pycom12g12790 pycom12g14250 pycom13g14570 pycom13g26080 pycom14g00240 pycom15g10960 pycom15g24390 pycom15g31880 pycom15g32630 pycom15g33590 pycom16g07100 pycom16g09710 pycom16g20130 pycom16g21120 pycom17g02320 pycom17g11710 pycom17g14970 pycom17g19270 pycom17g22280 pycom17g23050 pycom17g25230
rosa_chinensis	RchiOBHm_Chr7g0200361 RchiOBHm_Chr7g0226641
rosa_laevigata	RLG00000030820
rosa_multiflora	Rmu_sc0000129.1_g000009 Rmu_sc0000536.1_g000032 Rmu_sc0000663.1_g000015 Rmu_sc0000758.1_g000016 Rmu_sc0000857.1_g000019 Rmu_sc0001004.1_g000011 Rmu_sc0001096.1_g000018 Rmu_sc0001715.1_g000021 Rmu_sc0001781.1_g000006 Rmu_sc0002467.1_g000014 Rmu_sc0003018.1_g000003 Rmu_sc0003902.1_g000020 Rmu_sc0004048.1_g000013 Rmu_sc0005725.1_g000016 Rmu_sc0007871.1_g000002 Rmu_sc0008009.1_g000003 Rmu_sc0008223.1_g000013 Rmu_sc0008528.1_g000009 Rmu_sc0010621.1_g000003 Rmu_sc0010856.1_g000004 Rmu_sc0013113.1_g000005 Rmu_sc0016149.1_g000007 Rmu_ssc0000027.1_g000004 Rmu_ssc0000201.1_g000019
rosa_roxburghii	Rroxscaffold_2G00109130 Rroxscaffold_3G00232550 Rroxscaffold_7G00176580
rosa_rugosa	Rorug03G0276400 Rorug03G0276400
rosa_samantha	Rh1CG005700 Rh2BG308900 Rh3BG239200 Rh4DG043100 Rh5AG498300 Rh5CG377400 Rh7BG373200 Rh7DG189000
rosa_wichuraiana	Rw0G006950 Rw1G019470 Rw1G027440 Rw2G041930 Rw3G022370 Rw4G013430 Rw4G023110 Rw5G008510 Rw5G043680 Rw6G021680 Rw7G039660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	980
AccI	GTMKAC	2 cut(s)	318, 457
AccII	CGCG	1 cut(s)	298
AccIII	TCCGGA	1 cut(s)	570
AciI	CCGC	1 cut(s)	911
AclI	AACGTT	1 cut(s)	725
AclWI	GGATC	1 cut(s)	921
AcoI	YGGCCR	2 cut(s)	161, 258
AcvI	CACGTG	2 cut(s)	253, 385
AfaI	GTAC	5 cut(s)	225, 733, 946, 1552, 1589
AfiI	CCNNNNNNNGG	4 cut(s)	275, 276, 766, 767
AflIII	ACRYGT	1 cut(s)	1183
AgeI	ACCGGT	1 cut(s)	1067
AhlI	ACTAGT	1 cut(s)	674
AluBI	AGCT	4 cut(s)	218, 709, 878, 1024
AluI	AGCT	4 cut(s)	218, 709, 878, 1024
AlwI	GGATC	1 cut(s)	921
Aor13HI	TCCGGA	1 cut(s)	570
AoxI	GGCC	4 cut(s)	161, 258, 379, 864
ArsI	GACNNNNNNTTYG	2 cut(s)	327, 359
AseI	ATTAAT	2 cut(s)	540, 560
AsiGI	ACCGGT	1 cut(s)	1067
AspLEI	GCGC	3 cut(s)	298, 304, 1288
AspS9I	GGNCC	3 cut(s)	343, 429, 1445
AsuHPI	GGTGA	3 cut(s)	136, 170, 1283
AvaII	GGWCC	3 cut(s)	343, 429, 1445
BaeGI	GKGCMC	1 cut(s)	1215
BalI	TGGCCA	1 cut(s)	163
BanII	GRGCYC	1 cut(s)	1513
BauI	CACGAG	1 cut(s)	1408
BbrPI	CACGTG	2 cut(s)	253, 385
BbsI	GAAGAC	1 cut(s)	1200
BccI	CCATC	2 cut(s)	1073, 1436
BceAI	ACGGC	2 cut(s)	100, 273
BclI	TGATCA	1 cut(s)	447
BcuI	ACTAGT	1 cut(s)	674
BfaI	CTAG	6 cut(s)	675, 879, 1130, 1320, 1449, 1473
BfmI	CTRYAG	1 cut(s)	1338
BfoI	RGCGCY	1 cut(s)	1289
BmcAI	AGTACT	1 cut(s)	1552
Bme18I	GGWCC	3 cut(s)	343, 429, 1445
BmgT120I	GGNCC	3 cut(s)	343, 429, 1445
BmiI	GGNNCC	2 cut(s)	344, 1510
BmsI	GCATC	2 cut(s)	768, 1273
BpiI	GAAGAC	1 cut(s)	1200
BpmI	CTGGAG	1 cut(s)	517
BpuEI	CTTGAG	1 cut(s)	842
Bsa29I	ATCGAT	1 cut(s)	854
BsaAI	YACGTR	3 cut(s)	45, 253, 385
BsaJI	CCNNGG	3 cut(s)	402, 861, 867
BsaWI	WCCGGW	2 cut(s)	570, 1067
Bsc4I	CCNNNNNNNGG	4 cut(s)	275, 276, 766, 767
Bse118I	RCCGGY	1 cut(s)	1067
Bse1I	ACTGG	1 cut(s)	31
BseAI	TCCGGA	1 cut(s)	570
BseCI	ATCGAT	1 cut(s)	854
BseDI	CCNNGG	3 cut(s)	402, 861, 867
BseLI	CCNNNNNNNGG	4 cut(s)	275, 276, 766, 767
BseMII	CTCAG	1 cut(s)	350
BseNI	ACTGG	1 cut(s)	31
BseSI	GKGCMC	1 cut(s)	1215
Bsh1236I	CGCG	1 cut(s)	298
Bsh1285I	CGRYCG	1 cut(s)	322
BshFI	GGCC	4 cut(s)	163, 260, 381, 866
BshTI	ACCGGT	1 cut(s)	1067
BshVI	ATCGAT	1 cut(s)	854
BsiEI	CGRYCG	1 cut(s)	322
BsiSI	CCGG	2 cut(s)	571, 1068
BslFI	GGGAC	2 cut(s)	292, 384
BslI	CCNNNNNNNGG	4 cut(s)	275, 276, 766, 767
BsmFI	GGGAC	2 cut(s)	292, 384
BsmI	GAATGC	1 cut(s)	1060
BsnI	GGCC	4 cut(s)	163, 260, 381, 866
Bsp1286I	GDGCHC	2 cut(s)	1215, 1513
Bsp13I	TCCGGA	1 cut(s)	570
Bsp1407I	TGTACA	1 cut(s)	1587
Bsp143I	GATC	4 cut(s)	447, 913, 1171, 1390
BspACI	CCGC	1 cut(s)	911
BspANI	GGCC	4 cut(s)	163, 260, 381, 866
BspCNI	CTCAG	1 cut(s)	351
BspDI	ATCGAT	1 cut(s)	854
BspEI	TCCGGA	1 cut(s)	570
BspFNI	CGCG	1 cut(s)	298
BspHI	TCATGA	1 cut(s)	1189
BspLI	GGNNCC	2 cut(s)	344, 1510
BspMAI	CTGCAG	1 cut(s)	1342
BspPI	GGATC	1 cut(s)	921
BsrFI	RCCGGY	1 cut(s)	1067
BsrGI	TGTACA	1 cut(s)	1587
BsrI	ACTGG	1 cut(s)	31
BssAI	RCCGGY	1 cut(s)	1067
BssECI	CCNNGG	3 cut(s)	402, 861, 867
BssMI	GATC	4 cut(s)	447, 913, 1171, 1390
BssSI	CACGAG	1 cut(s)	1408
BssT1I	CCWWGG	3 cut(s)	402, 861, 867
Bst2BI	CACGAG	1 cut(s)	1408
Bst4CI	ACNGT	6 cut(s)	146, 228, 371, 433, 455, 475
BstAUI	TGTACA	1 cut(s)	1587
BstBAI	YACGTR	3 cut(s)	45, 253, 385
BstC8I	GCNNGC	4 cut(s)	262, 266, 300, 1416
BstDEI	CTNAG	2 cut(s)	197, 359
BstFNI	CGCG	1 cut(s)	298
BstH2I	RGCGCY	1 cut(s)	1289
BstHHI	GCGC	3 cut(s)	298, 304, 1288
BstKTI	GATC	4 cut(s)	450, 916, 1174, 1393
BstMBI	GATC	4 cut(s)	447, 913, 1171, 1390
BstMCI	CGRYCG	1 cut(s)	322
BstMWI	GCNNNNNNNGC	4 cut(s)	27, 1015, 1219, 1316
BstNSI	RCATGY	2 cut(s)	268, 1187
BstSFI	CTRYAG	1 cut(s)	1338
BstSLI	GKGCMC	1 cut(s)	1215
BstSNI	TACGTA	1 cut(s)	45
BstUI	CGCG	1 cut(s)	298
BstV2I	GAAGAC	1 cut(s)	1200
BstXI	CCANNNNNNTGG	2 cut(s)	171, 868
Bsu15I	ATCGAT	1 cut(s)	854
BsuRI	GGCC	4 cut(s)	163, 260, 381, 866
BsuTUI	ATCGAT	1 cut(s)	854
Cac8I	GCNNGC	4 cut(s)	262, 266, 300, 1416
CciI	TCATGA	1 cut(s)	1189
CfoI	GCGC	3 cut(s)	298, 304, 1288
Cfr10I	RCCGGY	1 cut(s)	1067
Cfr13I	GGNCC	3 cut(s)	343, 429, 1445
ClaI	ATCGAT	1 cut(s)	854
CseI	GACGC	3 cut(s)	304, 359, 1224
Csp6I	GTAC	5 cut(s)	224, 732, 945, 1551, 1588
CspAI	ACCGGT	1 cut(s)	1067
CviAII	CATG	8 cut(s)	22, 265, 396, 483, 809, 1175, 1184, 1190
CviQI	GTAC	5 cut(s)	224, 732, 945, 1551, 1588
DdeI	CTNAG	2 cut(s)	197, 359
DpnI	GATC	4 cut(s)	449, 915, 1173, 1392
DpnII	GATC	4 cut(s)	447, 913, 1171, 1390
DraI	TTTAAA	2 cut(s)	214, 1561
EaeI	YGGCCR	2 cut(s)	161, 258
Eco105I	TACGTA	1 cut(s)	45
Eco130I	CCWWGG	3 cut(s)	402, 861, 867
Eco147I	AGGCCT	1 cut(s)	866
Eco24I	GRGCYC	1 cut(s)	1513
Eco47I	GGWCC	3 cut(s)	343, 429, 1445
Eco72I	CACGTG	2 cut(s)	253, 385
EcoO109I	RGGNCCY	1 cut(s)	343
EcoRI	GAATTC	1 cut(s)	507
EcoT14I	CCWWGG	3 cut(s)	402, 861, 867
EcoT38I	GRGCYC	1 cut(s)	1513
ErhI	CCWWGG	3 cut(s)	402, 861, 867
FaeI	CATG	8 cut(s)	25, 268, 399, 486, 812, 1178, 1187, 1193
FaqI	GGGAC	2 cut(s)	292, 384
FatI	CATG	8 cut(s)	21, 264, 395, 482, 808, 1174, 1183, 1189
FbaI	TGATCA	1 cut(s)	447
FblI	GTMKAC	2 cut(s)	318, 457
FriOI	GRGCYC	1 cut(s)	1513
FspBI	CTAG	6 cut(s)	675, 879, 1130, 1320, 1449, 1473
GlaI	GCGC	3 cut(s)	297, 303, 1287
GsuI	CTGGAG	1 cut(s)	517
HaeII	RGCGCY	1 cut(s)	1289
HaeIII	GGCC	4 cut(s)	163, 260, 381, 866
HapII	CCGG	2 cut(s)	571, 1068
HgaI	GACGC	3 cut(s)	304, 359, 1224
HhaI	GCGC	3 cut(s)	298, 304, 1288
Hin1II	CATG	8 cut(s)	25, 268, 399, 486, 812, 1178, 1187, 1193
Hin6I	GCGC	3 cut(s)	296, 302, 1286
HinP1I	GCGC	3 cut(s)	296, 302, 1286
HincII	GTYRAC	3 cut(s)	319, 672, 1245
HindII	GTYRAC	3 cut(s)	319, 672, 1245
HindIII	AAGCTT	3 cut(s)	216, 707, 1022
HinfI	GANTC	3 cut(s)	175, 799, 851
HpaII	CCGG	2 cut(s)	571, 1068
HphI	GGTGA	3 cut(s)	136, 170, 1283
Hpy166II	GTNNAC	5 cut(s)	319, 458, 672, 732, 1245
Hpy188I	TCNGA	3 cut(s)	153, 360, 1508
Hpy188III	TCNNGA	8 cut(s)	277, 496, 571, 821, 1130, 1141, 1190, 1394
Hpy8I	GTNNAC	5 cut(s)	319, 458, 672, 732, 1245
Hpy99I	CGWCG	3 cut(s)	320, 353, 1240
HpyAV	CCTTC	4 cut(s)	110, 283, 371, 638
HpyCH4III	ACNGT	6 cut(s)	146, 228, 371, 433, 455, 475
HpyCH4IV	ACGT	6 cut(s)	44, 241, 252, 384, 460, 725
HpyCH4V	TGCA	4 cut(s)	231, 781, 1340, 1418
HpyF10VI	GCNNNNNNNGC	4 cut(s)	27, 1015, 1219, 1316
HpyF3I	CTNAG	2 cut(s)	197, 359
HpySE526I	ACGT	6 cut(s)	44, 241, 252, 384, 460, 725
Hsp92II	CATG	8 cut(s)	25, 268, 399, 486, 812, 1178, 1187, 1193
HspAI	GCGC	3 cut(s)	296, 302, 1286
Kpn2I	TCCGGA	1 cut(s)	570
Ksp22I	TGATCA	1 cut(s)	447
Kzo9I	GATC	4 cut(s)	447, 913, 1171, 1390
LmnI	GCTCC	1 cut(s)	1508
LpnPI	CCDG	9 cut(s)	12, 48, 274, 481, 584, 1081, 1134, 1182, 1274
LweI	GCATC	2 cut(s)	768, 1273
MaeI	CTAG	6 cut(s)	675, 879, 1130, 1320, 1449, 1473
MaeII	ACGT	6 cut(s)	44, 241, 252, 384, 460, 725
MaeIII	GTNAC	8 cut(s)	124, 237, 242, 253, 365, 721, 748, 919
MalI	GATC	4 cut(s)	449, 915, 1173, 1392
MboI	GATC	4 cut(s)	447, 913, 1171, 1390
MboII	GAAGA	6 cut(s)	631, 728, 881, 1205, 1217, 1382
MhlI	GDGCHC	2 cut(s)	1215, 1513
MlsI	TGGCCA	1 cut(s)	163
MluNI	TGGCCA	1 cut(s)	163
MlyI	GAGTC	2 cut(s)	169, 808
MmeI	TCCRAC	2 cut(s)	415, 484
MnlI	CCTC	7 cut(s)	82, 126, 280, 356, 1164, 1189, 1404
Mox20I	TGGCCA	1 cut(s)	163
MroI	TCCGGA	1 cut(s)	570
MscI	TGGCCA	1 cut(s)	163
MseI	TTAA	8 cut(s)	213, 522, 540, 560, 593, 1305, 1560, 1581
MslI	CAYNNNNRTG	2 cut(s)	1188, 1269
Msp20I	TGGCCA	1 cut(s)	163
MspI	CCGG	2 cut(s)	571, 1068
Mva1269I	GAATGC	1 cut(s)	1060
MvnI	CGCG	1 cut(s)	298
MwoI	GCNNNNNNNGC	4 cut(s)	27, 1015, 1219, 1316
NdeII	GATC	4 cut(s)	447, 913, 1171, 1390
NlaIII	CATG	8 cut(s)	25, 268, 399, 486, 812, 1178, 1187, 1193
NlaIV	GGNNCC	2 cut(s)	344, 1510
NmuCI	GTSAC	3 cut(s)	124, 242, 253
NspI	RCATGY	2 cut(s)	268, 1187
PaeI	GCATGC	1 cut(s)	268
PagI	TCATGA	1 cut(s)	1189
PceI	AGGCCT	1 cut(s)	866
PciI	ACATGT	1 cut(s)	1183
PctI	GAATGC	1 cut(s)	1060
PfeI	GAWTC	1 cut(s)	851
PinAI	ACCGGT	1 cut(s)	1067
PleI	GAGTC	2 cut(s)	169, 807
PmaCI	CACGTG	2 cut(s)	253, 385
PmlI	CACGTG	2 cut(s)	253, 385
PpsI	GAGTC	2 cut(s)	169, 807
Ppu21I	YACGTR	3 cut(s)	45, 253, 385
PpuMI	RGGWCCY	1 cut(s)	343
PscI	ACATGT	1 cut(s)	1183
PshBI	ATTAAT	2 cut(s)	540, 560
PsiI	TTATAA	1 cut(s)	980
Psp1406I	AACGTT	1 cut(s)	725
Psp5II	RGGWCCY	1 cut(s)	343
PspCI	CACGTG	2 cut(s)	253, 385
PspN4I	GGNNCC	2 cut(s)	344, 1510
PspPI	GGNCC	3 cut(s)	343, 429, 1445
PspPPI	RGGWCCY	1 cut(s)	343
PstI	CTGCAG	1 cut(s)	1342
RsaI	GTAC	5 cut(s)	225, 733, 946, 1552, 1589
RsaNI	GTAC	5 cut(s)	224, 732, 945, 1551, 1588
RseI	CAYNNNNRTG	2 cut(s)	1188, 1269
SalI	GTCGAC	1 cut(s)	317
SaqAI	TTAA	8 cut(s)	213, 522, 540, 560, 593, 1305, 1560, 1581
Sau3AI	GATC	4 cut(s)	447, 913, 1171, 1390
Sau96I	GGNCC	3 cut(s)	343, 429, 1445
ScaI	AGTACT	1 cut(s)	1552
SchI	GAGTC	2 cut(s)	169, 808
SduI	GDGCHC	2 cut(s)	1215, 1513
SfaNI	GCATC	2 cut(s)	768, 1273
SfcI	CTRYAG	1 cut(s)	1338
SinI	GGWCC	3 cut(s)	343, 429, 1445
SmiMI	CAYNNNNRTG	2 cut(s)	1188, 1269
SmlI	CTYRAG	1 cut(s)	821
SmoI	CTYRAG	1 cut(s)	821
SnaBI	TACGTA	1 cut(s)	45
SpeI	ACTAGT	1 cut(s)	674
SphI	GCATGC	1 cut(s)	268
SseBI	AGGCCT	1 cut(s)	866
SsiI	CCGC	1 cut(s)	911
SspI	AATATT	1 cut(s)	1086
SspMI	CTAG	6 cut(s)	675, 879, 1130, 1320, 1449, 1473
StuI	AGGCCT	1 cut(s)	866
StyI	CCWWGG	3 cut(s)	402, 861, 867
TaaI	ACNGT	6 cut(s)	146, 228, 371, 433, 455, 475
TaiI	ACGT	6 cut(s)	47, 244, 255, 387, 463, 728
TaqI	TCGA	3 cut(s)	318, 348, 854
TaqII	GACCGA	2 cut(s)	336, 1115
TatI	WGTACW	4 cut(s)	731, 944, 1550, 1587
TfiI	GAWTC	1 cut(s)	851
Tru1I	TTAA	8 cut(s)	213, 522, 540, 560, 593, 1305, 1560, 1581
Tru9I	TTAA	8 cut(s)	213, 522, 540, 560, 593, 1305, 1560, 1581
TseFI	GTSAC	3 cut(s)	124, 242, 253
Tsp45I	GTSAC	3 cut(s)	124, 242, 253
TspDTI	ATGAA	6 cut(s)	182, 650, 797, 1178, 1206, 1418
TspGWI	ACGGA	1 cut(s)	211
VpaK11BI	GGWCC	3 cut(s)	343, 429, 1445
VspI	ATTAAT	2 cut(s)	540, 560
XbaI	TCTAGA	1 cut(s)	1129
XceI	RCATGY	2 cut(s)	268, 1187
XmiI	GTMKAC	2 cut(s)	318, 457
XspI	CTAG	6 cut(s)	675, 879, 1130, 1320, 1449, 1473
ZrmI	AGTACT	1 cut(s)	1552

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.