Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0000206

Physical Location & Seq

Genomic Coordinates Forward (+)

22817510 .. 22820894

Gene Structure 3385 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g26080.19

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2589 bp

ATGCCTAGTACTATTTGCCCAGACCTGAAGCATCATTTGCTAGTAGTTTCTAGTGTTGGTATTTTGTTTTTATATTTTGTGCTTTCAATTTGTTTGCAGCTTTCTGTAGGCGGGTTTGTTAGAGCAAGTCCACAGTTGTGGATTGCTTGGGGGACAGTGGACCAAACAGGGATTGATTGCCCAACTGAAGCTGTCCAGCGTTGGGAGCCCGAGGGACTGGGCAGGCTCGAGCAACAGGCTTGTGAGGAATTCAGCCTGGCGTCAATCCCATTTTTAAATTTTTTTTTCTGTCAGGCTCGTGTGTCACATCCCGGCCCGGGCGGGACCACTTCCCCAGCCCGACTCCACTACCGTAGCACGATATTGTCCGCTTTGGGCTTACCATTCCCTCACGGTTTTCATGGGATTGCTCTAGCCCCCTTCTCGCTTAACTTCGGAGTTCCTACGGAACCCGAAGCCAGTGAGCTCCCAAAAGGCCTCGTGCTAGGTAGGGATGAGAATATACATATAAGAGATCGATCACACCCCTGGGCGATGTGGGATACCCCAGGAGCCCGTAGTGTAGTCTGCCTTAGTTACCGTTGTGACACGTGGCACAATCTGTTCATTCGATCTCAACGACTCTTTAAAATAGGTTGTCCAATTTGCAACAATCGAAGAAAAAATAGTTTTAAAATTAAGAAAAGTTACCGTTGTGACACGTGGCACAATCTGGAATGTTGGAATTCAAATGTTTTTTATATCCAACCTGTAAAAAATCTGAAAAAAATTCTGAAATATTTTTTAAAAAAAAATTGTTTTTACTTTTCTATAAATACTTTCTCATTATCATCTACCTTACACCAAAATTTCATATTTTCTCAACTACTTTCAATCACATTCCTATCTTTCTCTCAAAGTTTCAATCCAATTTTTTTCAATAAAATGACTACTGATGCAAGTACGAATTGGTCGCTTCTTGAAGATGTTGTTGAGAAAATGGGTGGGAAAAGAACCAAAGAATCGATGTCCAGTCGTTGGAAATTACTTAGCCAATCGTTTAGTATGTGGAGAGACGCCTTAGCACAAGCTAGTACTAATATTCGAAGTGGGGAAAATTACTCGAATCAGGTAACAATATATTATTTATTTTTGTTACCTACTTACATTATAATTATTTGTTTGTATTATTTATTTGTTACCTACTTTCATTATAATTATTTCTTCTCCTGCATTGTGTACAAAAATAAATCATTCAACCGGTGGAAATGTTGGAATATTGTCAAAGATTGTCCTAAATTCAGAGTTGTGCCTGTTGGTCCAAAAGTTTTCATGAACAGCTCCCCTCTACGCTCTACACCCGATCATGGCTCGCATGTTCATGAAGATGATGCAGAAGAAGTGCCTGAAACTAGGCCTGAAGGTAAGAAGGCTTCAAAGAGAAAAGGGAGTTCTTCCAAGAATGATTATGCAAAGTACATGGAAGAACTTGCTCACCAAGGTGAATTGACTTTGGCGCAGGAAATGGCGAAATTTGAGGCTGATAAGGCTAGAGAGAAGGCGAAAGCTGCAACTATTGAGAGAGAATTTCAAGCTAATGAGAGAGAAAGAGAACTATTTAGGCAAGAAATGGAACATGTTAGAGAAGAAAGAATGGCTCAACGAGATCGTGAGATTATGAATACACCTTTAGAAAGGAAGTCTCCAAATTCTAAATATTTTTGGAAGTCAGAGAAAGCGGACGTGGTGCGAAGGAGGCGTGCAAGAGAAGTGAGAGCAAGACATCCTAGCACCACAAATTGGTTAACCGTTCCAAATTTTACGTTTTTATTTTATTTTAAAAGCGTGAATTTACGAAATTGCCCTAGAGGCAAGGACTTTGACTTCCCAGATCCTCGTAGTACTCGTTGGTACGAACGTATAGGCAAAAGCCGTTTGCGAGTCCGGATTATAACGGTATATCCCACTTTGTGGGGTGAAGCCAAATCAGAAATGGGGAAAGAAAGAAAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAAAGGAAGTGGCTTTCCCGTCCACCCACACCCACCACAAGTTCCCATTTTCCAAGGCCGATTCTGGCCAACTCCGGTGGAGTTATTCGATGCCACCACCACCATCTTGAAGCTCTCATTCCCCTCTACAAAACCCACCCAAGAACCACCTTGATTAACCATGGTATGTGGCGGTTTAAAGCCACAAAATTTCCGGAAAATCGGCAAAGTAATGGCCGATGCCACCACTTGGGCTTTGTATCCCATCATGCCAGGAGAAAAATACAACCAACCTTGACCCCATTGGACCACTGTAGAAGACGAATCGACATTGGGAATTTCCGTCCACTTTTGGACTTCGTGGCAGGTATGAAAGTTGCTCCACTCACTGAGATCTTCATTTCTTCGGGGCGGCCGACCGCCACCCGCGGCGGCGCGTGGCCAGTGGGCCACCAATGCTATTTTAAGGCTATGTCGAATGTCTTGAATTCATACGATACGTTGCTTGATGAAAATGTGAATCGACGATGCGACCGTTGGATCGTCACCAAACTTGGATACATTATAATACGTAATATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0071704 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C TPR_2 TPR_8

Protein Analysis

863

Amino Acids

100.34

Weight (kDa)

9.87

Isoelectric Point (pI)

52.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000206)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04631 FvH4_1g14871 FvH4_3g18183 FvH4_4g07540 FvH4_4g11860 FvH4_4g12252 FvH4_4g14180 FvH4_4g24130 FvH4_5g15962 FvH4_5g21900 FvH4_5g34730 FvH4_5g38071 FvH4_6g38832 FvH4_7g00330 FvH4_7g07670 FvH4_7g08131 FvH4_7g29320
malus_domestica	MD02G1308300.v1.1 MD03G1238900.v1.1 MD04G1103900.v1.1 MD08G1183800.v1.1 MD11G1096700.v1.1 MD11G1261300.v1.1 MD12G1048200.v1.1
pyrus_communis	pycom01g07190 pycom01g17380 pycom02g05990 pycom02g17700 pycom02g17760 pycom02g17780 pycom03g02490 pycom03g07080 pycom03g08120 pycom03g11190 pycom03g11870 pycom03g16280 pycom04g02290 pycom04g05180 pycom04g07420 pycom04g10470 pycom04g10920 pycom04g11540 pycom05g00050 pycom05g04730 pycom05g04740 pycom05g07820 pycom05g13620 pycom05g19310 pycom06g03270 pycom06g08270 pycom06g09330 pycom06g20220 pycom07g08390 pycom07g22600 pycom08g09490 pycom08g13210 pycom08g14280 pycom08g15750 pycom08g18990 pycom08g21650 pycom09g01710 pycom09g03180 pycom09g09280 pycom09g10200 pycom09g11120 pycom09g11440 pycom10g02740 pycom10g07660 pycom10g09060 pycom10g20040 pycom111g01670 pycom11g08660 pycom11g09000 pycom11g12870 pycom11g14470 pycom11g15540 pycom11g19420 pycom11g22090 pycom12g10660 pycom12g11050 pycom12g12790 pycom12g14250 pycom13g14570 pycom13g26080 pycom14g00240 pycom15g10960 pycom15g24390 pycom15g31880 pycom15g32630 pycom15g33590 pycom16g07100 pycom16g09710 pycom16g20130 pycom16g21120 pycom17g02320 pycom17g11710 pycom17g14970 pycom17g19270 pycom17g22280 pycom17g23050 pycom17g25230
rosa_chinensis	RchiOBHm_Chr7g0200361 RchiOBHm_Chr7g0226641
rosa_laevigata	RLG00000030820
rosa_multiflora	Rmu_sc0000129.1_g000009 Rmu_sc0000536.1_g000032 Rmu_sc0000663.1_g000015 Rmu_sc0000758.1_g000016 Rmu_sc0000857.1_g000019 Rmu_sc0001004.1_g000011 Rmu_sc0001096.1_g000018 Rmu_sc0001715.1_g000021 Rmu_sc0001781.1_g000006 Rmu_sc0002467.1_g000014 Rmu_sc0003018.1_g000003 Rmu_sc0003902.1_g000020 Rmu_sc0004048.1_g000013 Rmu_sc0005725.1_g000016 Rmu_sc0007871.1_g000002 Rmu_sc0008009.1_g000003 Rmu_sc0008223.1_g000013 Rmu_sc0008528.1_g000009 Rmu_sc0010621.1_g000003 Rmu_sc0010856.1_g000004 Rmu_sc0013113.1_g000005 Rmu_sc0016149.1_g000007 Rmu_ssc0000027.1_g000004 Rmu_ssc0000201.1_g000019
rosa_roxburghii	Rroxscaffold_2G00109130 Rroxscaffold_3G00232550 Rroxscaffold_7G00176580
rosa_rugosa	Rorug03G0276400 Rorug03G0276400
rosa_samantha	Rh1CG005700 Rh2BG308900 Rh3BG239200 Rh4DG043100 Rh5AG498300 Rh5CG377400 Rh7BG373200 Rh7DG189000
rosa_wichuraiana	Rw0G006950 Rw1G019470 Rw1G027440 Rw2G041930 Rw3G022370 Rw4G013430 Rw4G023110 Rw5G008510 Rw5G043680 Rw6G021680 Rw7G039660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1151, 1194, 1931, 2573
Acc36I	ACCTGC	1 cut(s)	2363
AccB7I	CCANNNNNTGG	4 cut(s)	1017, 1779, 1950, 2257
AccII	CGCG	2 cut(s)	2436, 2444
AccIII	TCCGGA	2 cut(s)	1923, 2221
AclWI	GGATC	2 cut(s)	1865, 2555
AcoI	YGGCCR	4 cut(s)	2094, 2242, 2420, 2447
AcuI	CTGAAG	3 cut(s)	47, 207, 1419
AcvI	CACGTG	2 cut(s)	591, 702
AcyI	GRCGYC	2 cut(s)	260, 1056
AdeI	CACNNNGTG	1 cut(s)	1950
AfaI	GTAC	7 cut(s)	10, 943, 1075, 1220, 1457, 1882, 1892
AfiI	CCNNNNNNNGG	7 cut(s)	202, 317, 1017, 1346, 1779, 1950, 2257
AflIII	ACRYGT	3 cut(s)	588, 699, 1615
AgeI	ACCGGT	1 cut(s)	1239
AjiI	CACGTC	1 cut(s)	1723
AjnI	CCWGG	4 cut(s)	255, 527, 547, 2279
AleI	CACNNNNGTG	2 cut(s)	136, 1479
AluBI	AGCT	8 cut(s)	100, 191, 466, 1070, 1320, 1547, 1574, 2141
AluI	AGCT	8 cut(s)	100, 191, 466, 1070, 1320, 1547, 1574, 2141
Alw21I	GWGCWC	1 cut(s)	468
Alw26I	GTCTC	2 cut(s)	1047, 1686
AlwI	GGATC	2 cut(s)	1865, 2555
Ama87I	CYCGRG	3 cut(s)	209, 227, 316
Aor13HI	TCCGGA	2 cut(s)	1923, 2221
AoxI	GGCC	9 cut(s)	313, 475, 1394, 2084, 2094, 2242, 2420, 2447, 2455
ApeKI	GCWGC	2 cut(s)	97, 1547
AsiGI	ACCGGT	1 cut(s)	1239
AspLEI	GCGC	2 cut(s)	1498, 2444
AspS9I	GGNCC	6 cut(s)	160, 314, 324, 1298, 2314, 2455
AsuC2I	CCSGG	3 cut(s)	312, 317, 318
AsuHPI	GGTGA	4 cut(s)	1466, 1493, 1967, 2545
AsuII	TTCGAA	1 cut(s)	1084
AvaI	CYCGRG	3 cut(s)	209, 227, 316
AvaII	GGWCC	4 cut(s)	160, 324, 1298, 2314
BaeI	ACNNNNGTAYC	2 cut(s)	1882, 1915
BalI	TGGCCA	2 cut(s)	2096, 2449
BanII	GRGCYC	3 cut(s)	210, 468, 556
BarI	GAAGNNNNNNTAC	2 cut(s)	1396, 1428
BauI	CACGAG	2 cut(s)	297, 479
BbrPI	CACGTG	2 cut(s)	591, 702
BbsI	GAAGAC	1 cut(s)	2332
Bbv12I	GWGCWC	1 cut(s)	468
BbvI	GCAGC	2 cut(s)	109, 1534
BccI	CCATC	2 cut(s)	2139, 2280
BceAI	ACGGC	1 cut(s)	1896
BciT130I	CCWGG	4 cut(s)	257, 529, 549, 2281
BciVI	GTATCC	3 cut(s)	535, 2278, 2558
BcnI	CCSGG	3 cut(s)	312, 317, 318
BcoDI	GTCTC	2 cut(s)	1047, 1686
BfmI	CTRYAG	2 cut(s)	105, 2320
BfuAI	ACCTGC	1 cut(s)	2363
BfuI	GTATCC	3 cut(s)	535, 2278, 2558
BglI	GCCNNNNNGGC	1 cut(s)	1848
BglII	AGATCT	1 cut(s)	2400
BisI	GCNGC	5 cut(s)	98, 1548, 2420, 2437, 2440
BlsI	GCNGC	5 cut(s)	99, 1549, 2421, 2438, 2441
BmcAI	AGTACT	3 cut(s)	10, 1075, 1882
Bme1390I	CCNGG	7 cut(s)	257, 312, 317, 318, 529, 549, 2281
Bme18I	GGWCC	4 cut(s)	160, 324, 1298, 2314
BmeT110I	CYCGRG	3 cut(s)	209, 227, 316
BmgBI	CACGTC	1 cut(s)	1723
BmgT120I	GGNCC	6 cut(s)	160, 314, 324, 1298, 2314, 2455
BmiI	GGNNCC	4 cut(s)	207, 325, 450, 553
BmrFI	CCNGG	7 cut(s)	257, 312, 317, 318, 529, 549, 2281
BmrI	ACTGGG	1 cut(s)	227
BmsI	GCATC	6 cut(s)	40, 925, 1360, 2108, 2237, 2525
BmuI	ACTGGG	1 cut(s)	227
BpiI	GAAGAC	1 cut(s)	2332
Bpu10I	CCTNAGC	1 cut(s)	1060
Bpu14I	TTCGAA	1 cut(s)	1084
BpuMI	CCSGG	3 cut(s)	312, 317, 318
Bsa29I	ATCGAT	2 cut(s)	517, 1004
BsaAI	YACGTR	3 cut(s)	591, 702, 2579
BsaHI	GRCGYC	2 cut(s)	260, 1056
BsaJI	CCNNGG	9 cut(s)	210, 316, 527, 528, 547, 1477, 2081, 2188, 2434
BsaWI	WCCGGW	4 cut(s)	1239, 1923, 2102, 2221
Bsc4I	CCNNNNNNNGG	7 cut(s)	202, 317, 1017, 1346, 1779, 1950, 2257
Bse118I	RCCGGY	1 cut(s)	1239
Bse1I	ACTGG	4 cut(s)	222, 459, 1011, 2450
BseAI	TCCGGA	2 cut(s)	1923, 2221
BseBI	CCWGG	4 cut(s)	257, 529, 549, 2281
BseCI	ATCGAT	2 cut(s)	517, 1004
BseDI	CCNNGG	9 cut(s)	210, 316, 527, 528, 547, 1477, 2081, 2188, 2434
BseGI	GGATG	3 cut(s)	307, 499, 1762
BseLI	CCNNNNNNNGG	7 cut(s)	202, 317, 1017, 1346, 1779, 1950, 2257
BseMII	CTCAG	1 cut(s)	2388
BseNI	ACTGG	4 cut(s)	222, 459, 1011, 2450
BseX3I	CGGCCG	1 cut(s)	2420
BseXI	GCAGC	2 cut(s)	109, 1534
BseYI	CCCAGC	1 cut(s)	334
Bsh1236I	CGCG	2 cut(s)	2436, 2444
Bsh1285I	CGRYCG	3 cut(s)	2423, 2427, 2542
BshFI	GGCC	9 cut(s)	315, 477, 1396, 2086, 2096, 2244, 2422, 2449, 2457
BshTI	ACCGGT	1 cut(s)	1239
BshVI	ATCGAT	2 cut(s)	517, 1004
BsiEI	CGRYCG	3 cut(s)	2423, 2427, 2542
BsiHKAI	GWGCWC	1 cut(s)	468
BsiHKCI	CYCGRG	3 cut(s)	209, 227, 316
BsiSI	CCGG	6 cut(s)	312, 317, 1240, 1924, 2103, 2222
BslFI	GGGAC	3 cut(s)	166, 228, 337
BslI	CCNNNNNNNGG	7 cut(s)	202, 317, 1017, 1346, 1779, 1950, 2257
BsmAI	GTCTC	2 cut(s)	1047, 1686
BsmBI	CGTCTC	1 cut(s)	1047
BsmFI	GGGAC	3 cut(s)	166, 228, 337
BsnI	GGCC	9 cut(s)	315, 477, 1396, 2086, 2096, 2244, 2422, 2449, 2457
BsoBI	CYCGRG	3 cut(s)	209, 227, 316
Bsp119I	TTCGAA	1 cut(s)	1084
Bsp1286I	GDGCHC	3 cut(s)	210, 468, 556
Bsp13I	TCCGGA	2 cut(s)	1923, 2221
Bsp1407I	TGTACA	1 cut(s)	1218
Bsp143I	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
Bsp19I	CCATGG	1 cut(s)	2188
BspANI	GGCC	9 cut(s)	315, 477, 1396, 2086, 2096, 2244, 2422, 2449, 2457
BspCNI	CTCAG	1 cut(s)	2389
BspDI	ATCGAT	2 cut(s)	517, 1004
BspEI	TCCGGA	2 cut(s)	1923, 2221
BspFNI	CGCG	2 cut(s)	2436, 2444
BspHI	TCATGA	2 cut(s)	1311, 1360
BspLI	GGNNCC	4 cut(s)	207, 325, 450, 553
BspMI	ACCTGC	1 cut(s)	2363
BspPI	GGATC	2 cut(s)	1865, 2555
BspT104I	TTCGAA	1 cut(s)	1084
BsrFI	RCCGGY	1 cut(s)	1239
BsrGI	TGTACA	1 cut(s)	1218
BsrI	ACTGG	4 cut(s)	222, 459, 1011, 2450
BssAI	RCCGGY	1 cut(s)	1239
BssECI	CCNNGG	9 cut(s)	210, 316, 527, 528, 547, 1477, 2081, 2188, 2434
BssMI	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
BssNI	GRCGYC	2 cut(s)	260, 1056
BssSI	CACGAG	2 cut(s)	297, 479
BssT1I	CCWWGG	3 cut(s)	1477, 2081, 2188
Bst2BI	CACGAG	2 cut(s)	297, 479
Bst2UI	CCWGG	4 cut(s)	257, 529, 549, 2281
BstACI	GRCGYC	2 cut(s)	260, 1056
BstAPI	GCANNNNNTGC	1 cut(s)	37
BstAUI	TGTACA	1 cut(s)	1218
BstBAI	YACGTR	3 cut(s)	591, 702, 2579
BstBI	TTCGAA	1 cut(s)	1084
BstC8I	GCNNGC	3 cut(s)	224, 1352, 1740
BstDEI	CTNAG	4 cut(s)	572, 1028, 1060, 2397
BstDSI	CCRYGG	2 cut(s)	2188, 2434
BstF5I	GGATG	3 cut(s)	307, 499, 1762
BstFNI	CGCG	2 cut(s)	2436, 2444
BstHHI	GCGC	2 cut(s)	1498, 2444
BstKTI	GATC	8 cut(s)	517, 521, 614, 1345, 1648, 1873, 2403, 2550
BstMAI	GTCTC	2 cut(s)	1047, 1686
BstMBI	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
BstMCI	CGRYCG	3 cut(s)	2423, 2427, 2542
BstMWI	GCNNNNNNNGC	7 cut(s)	37, 205, 1526, 1547, 1735, 1848, 2463
BstNI	CCWGG	4 cut(s)	257, 529, 549, 2281
BstNSI	RCATGY	2 cut(s)	1358, 1619
BstSCI	CCNGG	7 cut(s)	255, 310, 315, 316, 527, 547, 2279
BstSFI	CTRYAG	2 cut(s)	105, 2320
BstSNI	TACGTA	1 cut(s)	2579
BstUI	CGCG	2 cut(s)	2436, 2444
BstV1I	GCAGC	2 cut(s)	109, 1534
BstV2I	GAAGAC	1 cut(s)	2332
BstX2I	RGATCY	2 cut(s)	1870, 2400
BstXI	CCANNNNNNTGG	1 cut(s)	138
BstYI	RGATCY	2 cut(s)	1870, 2400
BstZI	CGGCCG	1 cut(s)	2420
Bsu15I	ATCGAT	2 cut(s)	517, 1004
BsuI	GTATCC	3 cut(s)	535, 2278, 2558
BsuRI	GGCC	9 cut(s)	315, 477, 1396, 2086, 2096, 2244, 2422, 2449, 2457
BsuTUI	ATCGAT	2 cut(s)	517, 1004
BtgI	CCRYGG	2 cut(s)	2188, 2434
BtgZI	GCGATG	1 cut(s)	548
BtrI	CACGTC	1 cut(s)	1723
BtsCI	GGATG	3 cut(s)	307, 499, 1762
BtsIMutI	CAGTG	5 cut(s)	162, 466, 2317, 2394, 2457
BveI	ACCTGC	1 cut(s)	2363
Cac8I	GCNNGC	3 cut(s)	224, 1352, 1740
CciI	TCATGA	2 cut(s)	1311, 1360
CfoI	GCGC	2 cut(s)	1498, 2444
Cfr10I	RCCGGY	1 cut(s)	1239
Cfr13I	GGNCC	6 cut(s)	160, 314, 324, 1298, 2314, 2455
Cfr42I	CCGCGG	1 cut(s)	2437
Cfr9I	CCCGGG	1 cut(s)	316
ClaI	ATCGAT	2 cut(s)	517, 1004
CseI	GACGC	2 cut(s)	249, 1064
Csp6I	GTAC	7 cut(s)	9, 942, 1074, 1219, 1456, 1881, 1891
CspAI	ACCGGT	1 cut(s)	1239
CspCI	CAANNNNNGTGG	2 cut(s)	2086, 2121
CviAII	CATG	9 cut(s)	401, 1312, 1346, 1355, 1361, 1459, 1616, 2189, 2276
CviQI	GTAC	7 cut(s)	9, 942, 1074, 1219, 1456, 1881, 1891
DdeI	CTNAG	4 cut(s)	572, 1028, 1060, 2397
DpnI	GATC	8 cut(s)	516, 520, 613, 1344, 1647, 1872, 2402, 2549
DpnII	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
DraI	TTTAAA	6 cut(s)	276, 628, 673, 786, 1819, 2206
DraIII	CACNNNGTG	1 cut(s)	1950
EaeI	YGGCCR	4 cut(s)	2094, 2242, 2420, 2447
EagI	CGGCCG	1 cut(s)	2420
Ecl136II	GAGCTC	1 cut(s)	466
EclXI	CGGCCG	1 cut(s)	2420
Eco105I	TACGTA	1 cut(s)	2579
Eco130I	CCWWGG	3 cut(s)	1477, 2081, 2188
Eco147I	AGGCCT	2 cut(s)	477, 1396
Eco24I	GRGCYC	3 cut(s)	210, 468, 556
Eco47I	GGWCC	4 cut(s)	160, 324, 1298, 2314
Eco52I	CGGCCG	1 cut(s)	2420
Eco53kI	GAGCTC	1 cut(s)	466
Eco57I	CTGAAG	3 cut(s)	47, 207, 1419
Eco72I	CACGTG	2 cut(s)	591, 702
Eco88I	CYCGRG	3 cut(s)	209, 227, 316
EcoICRI	GAGCTC	1 cut(s)	466
EcoRI	GAATTC	3 cut(s)	248, 724, 2494
EcoRII	CCWGG	4 cut(s)	255, 527, 547, 2279
EcoT14I	CCWWGG	3 cut(s)	1477, 2081, 2188
EcoT38I	GRGCYC	3 cut(s)	210, 468, 556
ErhI	CCWWGG	3 cut(s)	1477, 2081, 2188
Esp3I	CGTCTC	1 cut(s)	1047
FaeI	CATG	9 cut(s)	404, 1315, 1349, 1358, 1364, 1462, 1619, 2192, 2279
FaqI	GGGAC	3 cut(s)	166, 228, 337
FatI	CATG	9 cut(s)	400, 1311, 1345, 1354, 1360, 1458, 1615, 2188, 2275
FauI	CCCGC	3 cut(s)	104, 314, 2441
Fnu4HI	GCNGC	5 cut(s)	98, 1548, 2420, 2437, 2440
FokI	GGATG	3 cut(s)	294, 506, 1749
FriOI	GRGCYC	3 cut(s)	210, 468, 556
Fsp4HI	GCNGC	5 cut(s)	98, 1548, 2420, 2437, 2440
GlaI	GCGC	2 cut(s)	1497, 2443
GluI	GCNGC	5 cut(s)	98, 1548, 2420, 2437, 2440
GsaI	CCCAGC	1 cut(s)	338
HaeIII	GGCC	9 cut(s)	315, 477, 1396, 2086, 2096, 2244, 2422, 2449, 2457
HapII	CCGG	6 cut(s)	312, 317, 1240, 1924, 2103, 2222
HgaI	GACGC	2 cut(s)	249, 1064
HhaI	GCGC	2 cut(s)	1498, 2444
Hin1I	GRCGYC	2 cut(s)	260, 1056
Hin1II	CATG	9 cut(s)	404, 1315, 1349, 1358, 1364, 1462, 1619, 2192, 2279
Hin6I	GCGC	2 cut(s)	1496, 2442
HinP1I	GCGC	2 cut(s)	1496, 2442
HincII	GTYRAC	1 cut(s)	1785
HindII	GTYRAC	1 cut(s)	1785
HinfI	GANTC	8 cut(s)	342, 621, 1001, 1105, 1920, 2089, 2331, 2527
HpaI	GTTAAC	1 cut(s)	1785
HpaII	CCGG	6 cut(s)	312, 317, 1240, 1924, 2103, 2222
HphI	GGTGA	4 cut(s)	1466, 1493, 1967, 2545
Hpy166II	GTNNAC	6 cut(s)	131, 160, 1219, 1785, 2051, 2354
Hpy188I	TCNGA	6 cut(s)	437, 762, 774, 1283, 1711, 1969
Hpy188III	TCNNGA	9 cut(s)	713, 959, 1312, 1361, 1649, 1924, 2135, 2222, 2491
Hpy8I	GTNNAC	6 cut(s)	131, 160, 1219, 1785, 2051, 2354
Hpy99I	CGWCG	1 cut(s)	2535
HpyAV	CCTTC	5 cut(s)	430, 1394, 1402, 1531, 1725
HpyCH4IV	ACGT	7 cut(s)	590, 701, 1722, 1802, 1897, 2507, 2578
HpyCH4V	TGCA	8 cut(s)	97, 648, 938, 1212, 1373, 1451, 1550, 1742
HpyF10VI	GCNNNNNNNGC	7 cut(s)	37, 205, 1526, 1547, 1735, 1848, 2463
HpyF3I	CTNAG	4 cut(s)	572, 1028, 1060, 2397
HpySE526I	ACGT	7 cut(s)	590, 701, 1722, 1802, 1897, 2507, 2578
Hsp92I	GRCGYC	2 cut(s)	260, 1056
Hsp92II	CATG	9 cut(s)	404, 1315, 1349, 1358, 1364, 1462, 1619, 2192, 2279
HspAI	GCGC	2 cut(s)	1496, 2442
Kpn2I	TCCGGA	2 cut(s)	1923, 2221
KspAI	GTTAAC	1 cut(s)	1785
KspI	CCGCGG	1 cut(s)	2437
Kzo9I	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
LmnI	GCTCC	5 cut(s)	205, 471, 551, 1325, 2392
Lsp1109I	GCAGC	2 cut(s)	109, 1534
LweI	GCATC	6 cut(s)	40, 925, 1360, 2108, 2237, 2525
MaeII	ACGT	7 cut(s)	590, 701, 1722, 1802, 1897, 2507, 2578
MaeIII	GTNAC	9 cut(s)	303, 575, 584, 686, 695, 1111, 1134, 1177, 2551
MalI	GATC	8 cut(s)	516, 520, 613, 1344, 1647, 1872, 2402, 2549
MboI	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
MflI	RGATCY	2 cut(s)	1870, 2400
MhlI	GDGCHC	3 cut(s)	210, 468, 556
MlsI	TGGCCA	2 cut(s)	2096, 2449
MluNI	TGGCCA	2 cut(s)	2096, 2449
MlyI	GAGTC	3 cut(s)	336, 615, 1929
MmeI	TCCRAC	5 cut(s)	701, 769, 998, 1232, 2525
Mox20I	TGGCCA	2 cut(s)	2096, 2449
MroI	TCCGGA	2 cut(s)	1923, 2221
MscI	TGGCCA	2 cut(s)	2096, 2449
MslI	CAYNNNNRTG	4 cut(s)	136, 1359, 1365, 1479
Msp20I	TGGCCA	2 cut(s)	2096, 2449
MspA1I	CMGCKG	1 cut(s)	2436
MspI	CCGG	6 cut(s)	312, 317, 1240, 1924, 2103, 2222
MspR9I	CCNGG	7 cut(s)	257, 312, 317, 318, 529, 549, 2281
MvaI	CCWGG	4 cut(s)	257, 529, 549, 2281
MvnI	CGCG	2 cut(s)	2436, 2444
MwoI	GCNNNNNNNGC	7 cut(s)	37, 205, 1526, 1547, 1735, 1848, 2463
NciI	CCSGG	3 cut(s)	312, 317, 318
NcoI	CCATGG	1 cut(s)	2188
NdeII	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
NlaIII	CATG	9 cut(s)	404, 1315, 1349, 1358, 1364, 1462, 1619, 2192, 2279
NlaIV	GGNNCC	4 cut(s)	207, 325, 450, 553
NmuCI	GTSAC	4 cut(s)	303, 584, 695, 2551
NspI	RCATGY	2 cut(s)	1358, 1619
NspV	TTCGAA	1 cut(s)	1084
OliI	CACNNNNGTG	2 cut(s)	136, 1479
PaeR7I	CTCGAG	1 cut(s)	227
PagI	TCATGA	2 cut(s)	1311, 1360
PasI	CCCWGGG	1 cut(s)	528
PceI	AGGCCT	2 cut(s)	477, 1396
PciI	ACATGT	1 cut(s)	1615
PcsI	WCGNNNNNNNCGW	4 cut(s)	616, 1882, 2420, 2539
PfeI	GAWTC	5 cut(s)	1001, 1105, 2089, 2331, 2527
PflMI	CCANNNNNTGG	4 cut(s)	1017, 1779, 1950, 2257
PinAI	ACCGGT	1 cut(s)	1239
PkrI	GCNGC	5 cut(s)	99, 1549, 2421, 2438, 2441
PleI	GAGTC	3 cut(s)	336, 615, 1928
PmaCI	CACGTG	2 cut(s)	591, 702
PmlI	CACGTG	2 cut(s)	591, 702
PpsI	GAGTC	3 cut(s)	336, 615, 1928
Ppu21I	YACGTR	3 cut(s)	591, 702, 2579
PscI	ACATGT	1 cut(s)	1615
PsiI	TTATAA	4 cut(s)	1151, 1194, 1931, 2573
Psp124BI	GAGCTC	1 cut(s)	468
Psp6I	CCWGG	4 cut(s)	255, 527, 547, 2279
PspCI	CACGTG	2 cut(s)	591, 702
PspFI	CCCAGC	1 cut(s)	334
PspGI	CCWGG	4 cut(s)	255, 527, 547, 2279
PspN4I	GGNNCC	4 cut(s)	207, 325, 450, 553
PspPI	GGNCC	6 cut(s)	160, 314, 324, 1298, 2314, 2455
PspXI	VCTCGAGB	1 cut(s)	227
PsuI	RGATCY	2 cut(s)	1870, 2400
RsaI	GTAC	7 cut(s)	10, 943, 1075, 1220, 1457, 1882, 1892
RsaNI	GTAC	7 cut(s)	9, 942, 1074, 1219, 1456, 1881, 1891
RseI	CAYNNNNRTG	4 cut(s)	136, 1359, 1365, 1479
SacI	GAGCTC	1 cut(s)	468
SacII	CCGCGG	1 cut(s)	2437
SatI	GCNGC	5 cut(s)	98, 1548, 2420, 2437, 2440
Sau3AI	GATC	8 cut(s)	514, 518, 611, 1342, 1645, 1870, 2400, 2547
Sau96I	GGNCC	6 cut(s)	160, 314, 324, 1298, 2314, 2455
ScaI	AGTACT	3 cut(s)	10, 1075, 1882
SchI	GAGTC	3 cut(s)	336, 615, 1929
ScrFI	CCNGG	7 cut(s)	257, 312, 317, 318, 529, 549, 2281
SduI	GDGCHC	3 cut(s)	210, 468, 556
SfaNI	GCATC	6 cut(s)	40, 925, 1360, 2108, 2237, 2525
SfcI	CTRYAG	2 cut(s)	105, 2320
Sfr274I	CTCGAG	1 cut(s)	227
Sfr303I	CCGCGG	1 cut(s)	2437
SfuI	TTCGAA	1 cut(s)	1084
SgrBI	CCGCGG	1 cut(s)	2437
SinI	GGWCC	4 cut(s)	160, 324, 1298, 2314
SlaI	CTCGAG	1 cut(s)	227
SmaI	CCCGGG	1 cut(s)	318
SmiMI	CAYNNNNRTG	4 cut(s)	136, 1359, 1365, 1479
SmlI	CTYRAG	1 cut(s)	227
SmoI	CTYRAG	1 cut(s)	227
SnaBI	TACGTA	1 cut(s)	2579
SrfI	GCCCGGGC	1 cut(s)	318
SseBI	AGGCCT	2 cut(s)	477, 1396
SspI	AATATT	5 cut(s)	779, 1081, 1258, 1697, 2584
SstI	GAGCTC	1 cut(s)	468
StuI	AGGCCT	2 cut(s)	477, 1396
StyD4I	CCNGG	7 cut(s)	255, 310, 315, 316, 527, 547, 2279
StyI	CCWWGG	3 cut(s)	1477, 2081, 2188
TaiI	ACGT	7 cut(s)	593, 704, 1725, 1805, 1900, 2510, 2581
TatI	WGTACW	5 cut(s)	8, 1073, 1218, 1455, 1880
TauI	GCSGC	3 cut(s)	2422, 2439, 2442
TfiI	GAWTC	5 cut(s)	1001, 1105, 2089, 2331, 2527
TscAI	CASTG	5 cut(s)	162, 466, 2324, 2401, 2457
TseFI	GTSAC	4 cut(s)	303, 584, 695, 2551
TseI	GCWGC	2 cut(s)	97, 1547
Tsp45I	GTSAC	4 cut(s)	303, 584, 695, 2551
TspGWI	ACGGA	2 cut(s)	461, 2339
TspMI	CCCGGG	1 cut(s)	316
TspRI	CASTG	5 cut(s)	162, 466, 2324, 2401, 2457
Van91I	CCANNNNNTGG	4 cut(s)	1017, 1779, 1950, 2257
VpaK11BI	GGWCC	4 cut(s)	160, 324, 1298, 2314
XceI	RCATGY	2 cut(s)	1358, 1619
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1969
XhoI	CTCGAG	1 cut(s)	227
XmaI	CCCGGG	1 cut(s)	316
ZrmI	AGTACT	3 cut(s)	10, 1075, 1882

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.