Rorug04G0002200

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000452
Physical Location & Seq
Reverse (-)
440008 .. 443884
3877 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0002200.1

Sequence Viewer

Length: 1449 bp
ATGGAGCTTAACTTCTACCTCACCCTCCTGTTGGGCTTTGTTTCCTTCGTCACCTTTTCTCTCTTCTTCCTCTTCTACAGGCACAGATCTCAGTTCACCGGCAACAACCTCCCTCCGGGGAAGGTCGGCTACCCGGTGATCGGAGAGAGCTACGAGTTCCTAGCCACGGGATGGAAAGGCCACCCCGAGAAATTCATCTTTGACCGCATGACCAAGTACTCCTCCGAAGTCTTCAAGACCTCCATCTTCGGCGAGAAGGCTTGCATCTTTGCCGGCGCCGCCTGCAACAAGTTCTTGTTCTCCAACGAGAACAAGCTCGTCACTGCCTGGTGGCCTAGCTCCGTCAACAAGGTCTTCCCTTCTTCCATGGAGACTTCCGCCAAAGAGGAGGCCAAGAAGATGAGGAAGATGCTCCCCAACTTCATGAACCCTCAGGCTCTTCAACGCTACATCGGAATCATGGACACCATCGCTCAACGACACTTTGCTGATGGCTGGGAAAACAAGAAGGAAGTCGAGGTCTTCCCCCTTGCCAAGAACTACACATTTTGGCTGGCTGCACGACTGTTCGTTAGCCTTGAGGACCCAAAGGACGTAGACAAATTCGGCGACCCCTTCCAACTGTTGGCCTCCGGAATCATCTCGATGCCAATTGACTTCCCCGGAACACCGTTCTATAAAGCCATCAAGGCCTCCAACTGGATCAGGGAGGAGCTGTACAAGATCATCAAGCAGAGGAAGATCGACTTGGCCGAGGGCAAGGCGTCACCCACCCAAGACATATTGTCCCACATGCTCTTGACTTGCGACGAGGAAGGAACCTACATGAAGGAGATGGACATCGCCGATAAGATTCTCGGATTGTTGATCGGAGGCCACGACACAGCCAGCGCCACCTGCACTTTCATTGTCAAGTACCTTGGAGAGCTCCCTCATATCTATGATGCAGTCTACAAGGAGCAAATGGAGATTGCGAACTCAAAAGCACCAGGGGAGTTGTTGAACTGGGATGATCTTCAGAAGATGAAGTACTCATGGAACGTGGCACAGGAAGTGTTGAGAGTGGCACCACCACTTCAAGGAGCTTTTAGGGAAGCGTTGCAAGACTTCGTCTTCAATGGCTTCACCATCCCTAAAGGCTGGAAGTTGTACTGGAGCGCAAACTCGACCCACAAGAGTGCGGCTTACTTCCCCGAACCCCAGAAGTTCGACCCTACCAGATTCGAAGGAAACGGACCTGCCCCATACACGTTTGTTCCCTTTGGAGGAGGCCCGAGAATGTGCCCCGGAAAAGAGTACGCCCGATTGGAAATTCTTGTTTTCATGCATAACCTAGTCAAGAGGTTCAAGTGGGAGGCGATTATTCCCGATGAGAAGATCGTGGTCGACCCGTTGCCCATGCCCGCCAAGGGACTTCCCATCCGCCTTTTCCCTCACAAAAAGGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00942 ko01100 ko01110 map00942 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

482

Amino Acids

55.06

Weight (kDa)

8.64

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 38 - 454 2.1e-54 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000452)

Species Orthologous Gene IDs
rosa_rugosa Rorug01G0066100 Rorug01G0066100 Rorug01G0069900 Rorug01G0089700 Rorug01G0090100 Rorug01G0097600 Rorug01G0099600 Rorug01G0101900 Rorug01G0102400 Rorug01G0118300 Rorug01G0124800 Rorug01G0169500 Rorug01G0238100 Rorug01G0451600 Rorug02G0188700 Rorug02G0229300 Rorug02G0253000 Rorug02G0256200 Rorug02G0258900 Rorug02G0339200 Rorug02G0392100 Rorug02G0491500 Rorug03G0141200 Rorug03G0192500 Rorug03G0200300 Rorug03G0218600 Rorug03G0269500 Rorug03G0269700 Rorug03G0272400 Rorug03G0276400 Rorug03G0283800 Rorug03G0334100 Rorug03G0356200 Rorug04G0002200 Rorug04G0008300 Rorug04G0031200 Rorug04G0040800 Rorug04G0063000 Rorug04G0069500.1 Rorug04G0070200 Rorug04G0114400 Rorug04G0181100 Rorug04G0205700 Rorug05G0004000 Rorug05G0018000 Rorug05G0018100 Rorug05G0090500 Rorug05G0108800 Rorug05G0118900 Rorug05G0202300 Rorug05G0214200 Rorug05G0243800 Rorug05G0243900 Rorug05G0266300 Rorug05G0272500 Rorug05G0276400 Rorug05G0291500 Rorug05G0293800 Rorug05G0350400 Rorug05G0360900 Rorug05G0369500 Rorug05G0370100 Rorug05G0370500 Rorug05G0407800 Rorug05G0418900 Rorug05G0524200 Rorug05G0526800 Rorug05G0547200 Rorug06G0004100 Rorug06G0015000 Rorug06G0027300 Rorug06G0048200 Rorug06G0059100 Rorug06G0066200 Rorug06G0128100 Rorug06G0363800.1 Rorug07G0031500 Rorug07G0184700 Rorug07G0185600 Rorug07G0189600 Rorug07G0196500 Rorug07G0200700 Rorug07G0219700 Rorug07G0219900 Rorug07G0219900 Rorug07G0223000 Rorug07G0223000 Rorug07G0230800 Rorug07G0243500 Rorug07G0244700 Rorug07G0245700 Rorug07G0279800 Rorug07G0305800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 905
Acc36I ACCTGC 2 cut(s) 905, 1246
AccB1I GGYRCC 2 cut(s) 275, 1066
AccB7I CCANNNNNTGG 2 cut(s) 171, 625
AccI GTMKAC 3 cut(s) 597, 951, 1386
AccIII TCCGGA 1 cut(s) 632
AciI CCGC 6 cut(s) 205, 279, 378, 1181, 1404, 1423
AclWI GGATC 1 cut(s) 710
AcoI YGGCCR 1 cut(s) 750
AcsI RAATTY 3 cut(s) 191, 602, 1311
AcuI CTGAAG 1 cut(s) 1001
AcyI GRCGYC 2 cut(s) 276, 764
AfaI GTAC 6 cut(s) 218, 719, 917, 1031, 1151, 1298
AflIII ACRYGT 1 cut(s) 1248
AgsI TTSAA 6 cut(s) 235, 443, 1003, 1079, 1117, 1348
AhdI GACNNNNNGTC 1 cut(s) 784
AjnI CCWGG 2 cut(s) 326, 988
AjuI GAANNNNNNNTTGG 2 cut(s) 731, 763
AleI CACNNNNGTG 1 cut(s) 1176
AluBI AGCT 7 cut(s) 7, 150, 316, 339, 715, 928, 1085
AluI AGCT 7 cut(s) 7, 150, 316, 339, 715, 928, 1085
Alw21I GWGCWC 1 cut(s) 930
Alw26I GTCTC 1 cut(s) 365
AlwI GGATC 1 cut(s) 710
Ama87I CYCGRG 2 cut(s) 185, 1273
Aor13HI TCCGGA 1 cut(s) 632
AoxI GGCC 8 cut(s) 178, 332, 390, 627, 690, 750, 874, 1270
ApeKI GCWGC 1 cut(s) 557
ApoI RAATTY 3 cut(s) 191, 602, 1311
AspLEI GCGC 3 cut(s) 278, 893, 1160
AspS9I GGNCC 3 cut(s) 583, 1235, 1271
AsuC2I CCSGG 4 cut(s) 117, 134, 663, 1287
AsuHPI GGTGA 6 cut(s) 13, 43, 88, 148, 759, 1117
AsuII TTCGAA 1 cut(s) 1224
AvaI CYCGRG 2 cut(s) 185, 1273
AvaII GGWCC 2 cut(s) 583, 1235
AxyI CCTNAGG 1 cut(s) 432
BaeGI GKGCMC 1 cut(s) 1286
BanI GGYRCC 2 cut(s) 275, 1066
BanII GRGCYC 1 cut(s) 930
BarI GAAGNNNNNNTAC 4 cut(s) 113, 145, 1013, 1045
BbsI GAAGAC 4 cut(s) 223, 346, 514, 1105
Bbv12I GWGCWC 1 cut(s) 930
BbvI GCAGC 1 cut(s) 544
BccI CCATC 8 cut(s) 165, 251, 476, 485, 692, 829, 1136, 1427
BciT130I CCWGG 2 cut(s) 328, 990
BcnI CCSGG 4 cut(s) 117, 134, 663, 1287
BcoDI GTCTC 1 cut(s) 365
BfaI CTAG 3 cut(s) 161, 336, 1334
BfmI CTRYAG 1 cut(s) 76
BfoI RGCGCY 2 cut(s) 279, 894
BfuAI ACCTGC 2 cut(s) 905, 1246
BglI GCCNNNNNGGC 1 cut(s) 689
BglII AGATCT 1 cut(s) 86
BisI GCNGC 3 cut(s) 279, 558, 1182
BlsI GCNGC 3 cut(s) 280, 559, 1183
BmcAI AGTACT 2 cut(s) 218, 1031
Bme1390I CCNGG 6 cut(s) 117, 134, 328, 663, 990, 1287
Bme18I GGWCC 2 cut(s) 583, 1235
BmeRI GACNNNNNGTC 1 cut(s) 784
BmeT110I CYCGRG 2 cut(s) 185, 1273
BmgT120I GGNCC 3 cut(s) 583, 1235, 1271
BmiI GGNNCC 4 cut(s) 277, 585, 820, 1068
BmrFI CCNGG 6 cut(s) 117, 134, 328, 663, 990, 1287
BmrI ACTGGG 1 cut(s) 1015
BmsI GCATC 4 cut(s) 273, 399, 636, 934
BmuI ACTGGG 1 cut(s) 1015
BpiI GAAGAC 4 cut(s) 223, 346, 514, 1105
BpmI CTGGAG 1 cut(s) 1174
Bpu14I TTCGAA 1 cut(s) 1224
BpuEI CTTGAG 1 cut(s) 599
BpuMI CCSGG 4 cut(s) 117, 134, 663, 1287
BsaBI GATNNNNATC 1 cut(s) 839
BsaHI GRCGYC 2 cut(s) 276, 764
BsaJI CCNNGG 9 cut(s) 116, 165, 366, 661, 753, 919, 989, 1285, 1407
BsaWI WCCGGW 1 cut(s) 632
BsaXI ACNNNNNCTCC 2 cut(s) 701, 731
Bse118I RCCGGY 2 cut(s) 98, 272
Bse1I ACTGG 3 cut(s) 704, 1010, 1157
Bse21I CCTNAGG 1 cut(s) 432
Bse8I GATNNNNATC 1 cut(s) 839
BseAI TCCGGA 1 cut(s) 632
BseBI CCWGG 2 cut(s) 328, 990
BseDI CCNNGG 9 cut(s) 116, 165, 366, 661, 753, 919, 989, 1285, 1407
BseGI GGATG 4 cut(s) 176, 1015, 1128, 1419
BseJI GATNNNNATC 1 cut(s) 839
BseMII CTCAG 2 cut(s) 104, 446
BseNI ACTGG 3 cut(s) 704, 1010, 1157
BseRI GAGGAG 4 cut(s) 211, 401, 725, 1281
BseSI GKGCMC 1 cut(s) 1286
BseXI GCAGC 1 cut(s) 544
BseYI CCCAGC 1 cut(s) 495
BsgI GTGCAG 2 cut(s) 543, 883
BshFI GGCC 8 cut(s) 180, 334, 392, 629, 692, 752, 876, 1272
BshNI GGYRCC 2 cut(s) 275, 1066
BsiHKAI GWGCWC 1 cut(s) 930
BsiHKCI CYCGRG 2 cut(s) 185, 1273
BsiSI CCGG 7 cut(s) 99, 116, 134, 273, 633, 663, 1287
BslFI GGGAC 2 cut(s) 772, 1425
BsmAI GTCTC 1 cut(s) 365
BsmFI GGGAC 2 cut(s) 772, 1425
BsnI GGCC 8 cut(s) 180, 334, 392, 629, 692, 752, 876, 1272
BsoBI CYCGRG 2 cut(s) 185, 1273
Bsp119I TTCGAA 1 cut(s) 1224
Bsp1286I GDGCHC 2 cut(s) 930, 1286
Bsp13I TCCGGA 1 cut(s) 632
Bsp1407I TGTACA 1 cut(s) 717
Bsp143I GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
Bsp19I CCATGG 1 cut(s) 366
BspACI CCGC 6 cut(s) 205, 279, 378, 1181, 1404, 1423
BspANI GGCC 8 cut(s) 180, 334, 392, 629, 692, 752, 876, 1272
BspCNI CTCAG 2 cut(s) 103, 445
BspEI TCCGGA 1 cut(s) 632
BspHI TCATGA 1 cut(s) 423
BspLI GGNNCC 4 cut(s) 277, 585, 820, 1068
BspMI ACCTGC 2 cut(s) 905, 1246
BspPI GGATC 1 cut(s) 710
BspQI GCTCTTC 1 cut(s) 444
BspT104I TTCGAA 1 cut(s) 1224
BspT107I GGYRCC 2 cut(s) 275, 1066
BsrFI RCCGGY 2 cut(s) 98, 272
BsrGI TGTACA 1 cut(s) 717
BsrI ACTGG 3 cut(s) 704, 1010, 1157
BssAI RCCGGY 2 cut(s) 98, 272
BssECI CCNNGG 9 cut(s) 116, 165, 366, 661, 753, 919, 989, 1285, 1407
BssMI GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
BssNI GRCGYC 2 cut(s) 276, 764
BssT1I CCWWGG 3 cut(s) 366, 919, 1407
Bst2UI CCWGG 2 cut(s) 328, 990
Bst4CI ACNGT 3 cut(s) 567, 624, 672
Bst6I CTCTTC 3 cut(s) 68, 77, 444
BstACI GRCGYC 2 cut(s) 276, 764
BstAUI TGTACA 1 cut(s) 717
BstBI TTCGAA 1 cut(s) 1224
BstC8I GCNNGC 6 cut(s) 262, 274, 283, 555, 889, 1404
BstDEI CTNAG 2 cut(s) 90, 432
BstDSI CCRYGG 2 cut(s) 165, 366
BstF5I GGATG 4 cut(s) 176, 1015, 1128, 1419
BstH2I RGCGCY 2 cut(s) 279, 894
BstHHI GCGC 3 cut(s) 278, 893, 1160
BstKTI GATC 8 cut(s) 89, 141, 705, 726, 744, 870, 1015, 1380
BstMAI GTCTC 1 cut(s) 365
BstMBI GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
BstMWI GCNNNNNNNGC 4 cut(s) 278, 282, 689, 897
BstNI CCWGG 2 cut(s) 328, 990
BstNSI RCATGY 1 cut(s) 796
BstSCI CCNGG 6 cut(s) 115, 132, 326, 661, 988, 1285
BstSFI CTRYAG 1 cut(s) 76
BstSLI GKGCMC 1 cut(s) 1286
BstV1I GCAGC 1 cut(s) 544
BstV2I GAAGAC 4 cut(s) 223, 346, 514, 1105
BstX2I RGATCY 1 cut(s) 86
BstYI RGATCY 1 cut(s) 86
Bsu36I CCTNAGG 1 cut(s) 432
BsuRI GGCC 8 cut(s) 180, 334, 392, 629, 692, 752, 876, 1272
BtgI CCRYGG 2 cut(s) 165, 366
BtgZI GCGATG 2 cut(s) 454, 826
BtsCI GGATG 4 cut(s) 176, 1015, 1128, 1419
BtsI GCAGTG 1 cut(s) 321
BtsIMutI CAGTG 1 cut(s) 321
BveI ACCTGC 2 cut(s) 905, 1246
Cac8I GCNNGC 6 cut(s) 262, 274, 283, 555, 889, 1404
CciI TCATGA 1 cut(s) 423
CfoI GCGC 3 cut(s) 278, 893, 1160
Cfr10I RCCGGY 2 cut(s) 98, 272
Cfr13I GGNCC 3 cut(s) 583, 1235, 1271
CseI GACGC 1 cut(s) 753
Csp6I GTAC 6 cut(s) 217, 718, 916, 1030, 1150, 1297
CviAII CATG 9 cut(s) 208, 367, 424, 460, 793, 826, 1035, 1324, 1399
CviQI GTAC 6 cut(s) 217, 718, 916, 1030, 1150, 1297
DdeI CTNAG 2 cut(s) 90, 432
DinI GGCGCC 1 cut(s) 277
DpnI GATC 8 cut(s) 88, 140, 704, 725, 743, 869, 1014, 1379
DpnII GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
DriI GACNNNNNGTC 1 cut(s) 784
EaeI YGGCCR 1 cut(s) 750
Eam1104I CTCTTC 3 cut(s) 68, 77, 444
Eam1105I GACNNNNNGTC 1 cut(s) 784
EarI CTCTTC 3 cut(s) 68, 77, 444
EciI GGCGGA 2 cut(s) 367, 1412
Ecl136II GAGCTC 1 cut(s) 928
Eco130I CCWWGG 3 cut(s) 366, 919, 1407
Eco147I AGGCCT 1 cut(s) 692
Eco24I GRGCYC 1 cut(s) 930
Eco47I GGWCC 2 cut(s) 583, 1235
Eco53kI GAGCTC 1 cut(s) 928
Eco57I CTGAAG 1 cut(s) 1001
Eco81I CCTNAGG 1 cut(s) 432
Eco88I CYCGRG 2 cut(s) 185, 1273
EcoICRI GAGCTC 1 cut(s) 928
EcoO109I RGGNCCY 1 cut(s) 583
EcoRII CCWGG 2 cut(s) 326, 988
EcoT14I CCWWGG 3 cut(s) 366, 919, 1407
EcoT22I ATGCAT 1 cut(s) 1329
EcoT38I GRGCYC 1 cut(s) 930
EgeI GGCGCC 1 cut(s) 277
EheI GGCGCC 1 cut(s) 277
ErhI CCWWGG 3 cut(s) 366, 919, 1407
FaeI CATG 9 cut(s) 211, 370, 427, 463, 796, 829, 1038, 1327, 1402
FalI AAGNNNNNCTT 2 cut(s) 731, 763
FaqI GGGAC 2 cut(s) 772, 1425
FatI CATG 9 cut(s) 207, 366, 423, 459, 792, 825, 1034, 1323, 1398
FauI CCCGC 1 cut(s) 1411
FblI GTMKAC 3 cut(s) 597, 951, 1386
Fnu4HI GCNGC 3 cut(s) 279, 558, 1182
FokI GGATG 4 cut(s) 183, 1022, 1115, 1406
FriOI GRGCYC 1 cut(s) 930
Fsp4HI GCNGC 3 cut(s) 279, 558, 1182
FspBI CTAG 3 cut(s) 161, 336, 1334
GlaI GCGC 3 cut(s) 277, 892, 1159
GluI GCNGC 3 cut(s) 279, 558, 1182
GsaI CCCAGC 1 cut(s) 499
GsuI CTGGAG 1 cut(s) 1174
HaeII RGCGCY 2 cut(s) 279, 894
HaeIII GGCC 8 cut(s) 180, 334, 392, 629, 692, 752, 876, 1272
HapII CCGG 7 cut(s) 99, 116, 134, 273, 633, 663, 1287
HgaI GACGC 1 cut(s) 753
HhaI GCGC 3 cut(s) 278, 893, 1160
Hin1I GRCGYC 2 cut(s) 276, 764
Hin1II CATG 9 cut(s) 211, 370, 427, 463, 796, 829, 1038, 1327, 1402
Hin6I GCGC 3 cut(s) 276, 891, 1158
HinP1I GCGC 3 cut(s) 276, 891, 1158
HincII GTYRAC 2 cut(s) 346, 1387
HindII GTYRAC 2 cut(s) 346, 1387
HinfI GANTC 4 cut(s) 456, 636, 853, 1221
HpaII CCGG 7 cut(s) 99, 116, 134, 273, 633, 663, 1287
HphI GGTGA 6 cut(s) 13, 43, 88, 148, 759, 1117
Hpy166II GTNNAC 5 cut(s) 96, 346, 598, 952, 1387
Hpy188I TCNGA 6 cut(s) 143, 226, 455, 860, 872, 1020
Hpy188III TCNNGA 7 cut(s) 235, 424, 633, 643, 799, 1339, 1367
Hpy8I GTNNAC 5 cut(s) 96, 346, 598, 952, 1387
Hpy99I CGWCG 1 cut(s) 812
HpyAV CCTTC 9 cut(s) 55, 115, 250, 369, 502, 625, 809, 823, 1220
HpyCH4III ACNGT 3 cut(s) 567, 624, 672
HpyCH4IV ACGT 3 cut(s) 594, 1041, 1250
HpyCH4V TGCA 7 cut(s) 264, 285, 560, 900, 947, 1102, 1327
HpyF10VI GCNNNNNNNGC 4 cut(s) 278, 282, 689, 897
HpyF3I CTNAG 2 cut(s) 90, 432
HpySE526I ACGT 3 cut(s) 594, 1041, 1250
Hsp92I GRCGYC 2 cut(s) 276, 764
Hsp92II CATG 9 cut(s) 211, 370, 427, 463, 796, 829, 1038, 1327, 1402
HspAI GCGC 3 cut(s) 276, 891, 1158
KasI GGCGCC 1 cut(s) 275
Kpn2I TCCGGA 1 cut(s) 632
KroI GCCGGC 1 cut(s) 272
KroNI GCCGGC 1 cut(s) 274
Kzo9I GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
LguI GCTCTTC 1 cut(s) 444
LmnI GCTCC 8 cut(s) 4, 344, 417, 712, 933, 958, 1082, 1155
Lsp1109I GCAGC 1 cut(s) 544
LweI GCATC 4 cut(s) 273, 399, 636, 934
MaeI CTAG 3 cut(s) 161, 336, 1334
MaeII ACGT 3 cut(s) 594, 1041, 1250
MaeIII GTNAC 3 cut(s) 49, 319, 765
MalI GATC 8 cut(s) 88, 140, 704, 725, 743, 869, 1014, 1379
MboI GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
MfeI CAATTG 1 cut(s) 651
MflI RGATCY 1 cut(s) 86
MhlI GDGCHC 2 cut(s) 930, 1286
MluCI AATT 4 cut(s) 191, 602, 651, 1311
Mly113I GGCGCC 1 cut(s) 276
MmeI TCCRAC 3 cut(s) 327, 643, 720
Mph1103I ATGCAT 1 cut(s) 1329
MroI TCCGGA 1 cut(s) 632
MroNI GCCGGC 1 cut(s) 272
MseI TTAA 2 cut(s) 9, 1447
MslI CAYNNNNRTG 3 cut(s) 644, 939, 1176
MspI CCGG 7 cut(s) 99, 116, 134, 273, 633, 663, 1287
MspR9I CCNGG 6 cut(s) 117, 134, 328, 663, 990, 1287
MunI CAATTG 1 cut(s) 651
MvaI CCWGG 2 cut(s) 328, 990
MwoI GCNNNNNNNGC 4 cut(s) 278, 282, 689, 897
NaeI GCCGGC 1 cut(s) 274
NarI GGCGCC 1 cut(s) 276
NciI CCSGG 4 cut(s) 117, 134, 663, 1287
NcoI CCATGG 1 cut(s) 366
NdeII GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
NgoMIV GCCGGC 1 cut(s) 272
NlaIII CATG 9 cut(s) 211, 370, 427, 463, 796, 829, 1038, 1327, 1402
NlaIV GGNNCC 4 cut(s) 277, 585, 820, 1068
NmeAIII GCCGAG 1 cut(s) 778
NmuCI GTSAC 3 cut(s) 49, 319, 765
NsiI ATGCAT 1 cut(s) 1329
NspI RCATGY 1 cut(s) 796
NspV TTCGAA 1 cut(s) 1224
OliI CACNNNNGTG 1 cut(s) 1176
PagI TCATGA 1 cut(s) 423
PaqCI CACCTGC 1 cut(s) 905
PceI AGGCCT 1 cut(s) 692
PciSI GCTCTTC 1 cut(s) 444
PcsI WCGNNNNNNNCGW 2 cut(s) 750, 876
PdiI GCCGGC 1 cut(s) 274
PfeI GAWTC 4 cut(s) 456, 636, 853, 1221
PflFI GACNNNGTC 1 cut(s) 1109
PflMI CCANNNNNTGG 2 cut(s) 171, 625
PkrI GCNGC 3 cut(s) 280, 559, 1183
PluTI GGCGCC 1 cut(s) 279
PpuMI RGGWCCY 1 cut(s) 583
Psp124BI GAGCTC 1 cut(s) 930
Psp5II RGGWCCY 1 cut(s) 583
Psp6I CCWGG 2 cut(s) 326, 988
PspFI CCCAGC 1 cut(s) 495
PspGI CCWGG 2 cut(s) 326, 988
PspN4I GGNNCC 4 cut(s) 277, 585, 820, 1068
PspPI GGNCC 3 cut(s) 583, 1235, 1271
PspPPI RGGWCCY 1 cut(s) 583
PsuI RGATCY 1 cut(s) 86
PsyI GACNNNGTC 1 cut(s) 1109
RsaI GTAC 6 cut(s) 218, 719, 917, 1031, 1151, 1298
RsaNI GTAC 6 cut(s) 217, 718, 916, 1030, 1150, 1297
RseI CAYNNNNRTG 3 cut(s) 644, 939, 1176
SacI GAGCTC 1 cut(s) 930
SalI GTCGAC 1 cut(s) 1385
SapI GCTCTTC 1 cut(s) 444
SaqAI TTAA 2 cut(s) 9, 1447
SatI GCNGC 3 cut(s) 279, 558, 1182
Sau3AI GATC 8 cut(s) 86, 138, 702, 723, 741, 867, 1012, 1377
Sau96I GGNCC 3 cut(s) 583, 1235, 1271
ScaI AGTACT 2 cut(s) 218, 1031
ScrFI CCNGG 6 cut(s) 117, 134, 328, 663, 990, 1287
SduI GDGCHC 2 cut(s) 930, 1286
SfaNI GCATC 4 cut(s) 273, 399, 636, 934
SfcI CTRYAG 1 cut(s) 76
SfoI GGCGCC 1 cut(s) 277
SfuI TTCGAA 1 cut(s) 1224
SinI GGWCC 2 cut(s) 583, 1235
SmiMI CAYNNNNRTG 3 cut(s) 644, 939, 1176
SmlI CTYRAG 1 cut(s) 578
SmoI CTYRAG 1 cut(s) 578
Sse9I AATT 4 cut(s) 191, 602, 651, 1311
SseBI AGGCCT 1 cut(s) 692
SsiI CCGC 6 cut(s) 205, 279, 378, 1181, 1404, 1423
SspDI GGCGCC 1 cut(s) 275
SspMI CTAG 3 cut(s) 161, 336, 1334
SstI GAGCTC 1 cut(s) 930
StuI AGGCCT 1 cut(s) 692
StyD4I CCNGG 6 cut(s) 115, 132, 326, 661, 988, 1285
StyI CCWWGG 3 cut(s) 366, 919, 1407
TaaI ACNGT 3 cut(s) 567, 624, 672
TaiI ACGT 3 cut(s) 597, 1044, 1253
TaqI TCGA 7 cut(s) 516, 644, 744, 1166, 1209, 1224, 1386
TasI AATT 4 cut(s) 191, 602, 651, 1311
TatI WGTACW 4 cut(s) 216, 717, 1029, 1149
TauI GCSGC 2 cut(s) 281, 1184
TfiI GAWTC 4 cut(s) 456, 636, 853, 1221
Tru1I TTAA 2 cut(s) 9, 1447
Tru9I TTAA 2 cut(s) 9, 1447
TscAI CASTG 1 cut(s) 328
TseFI GTSAC 3 cut(s) 49, 319, 765
TseI GCWGC 1 cut(s) 557
Tsp45I GTSAC 3 cut(s) 49, 319, 765
TspDTI ATGAA 7 cut(s) 184, 412, 440, 842, 895, 1040, 1312
TspGWI ACGGA 2 cut(s) 331, 1248
TspRI CASTG 1 cut(s) 328
Tth111I GACNNNGTC 1 cut(s) 1109
Van91I CCANNNNNTGG 2 cut(s) 171, 625
VpaK11BI GGWCC 2 cut(s) 583, 1235
XapI RAATTY 3 cut(s) 191, 602, 1311
XceI RCATGY 1 cut(s) 796
XmiI GTMKAC 3 cut(s) 597, 951, 1386
XspI CTAG 3 cut(s) 161, 336, 1334
ZrmI AGTACT 2 cut(s) 218, 1031
Zsp2I ATGCAT 1 cut(s) 1329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.