Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Glyco_hydro_35 | PF01301 | 35 - 339 | 6.6e-117 | Glycosyl hydrolases family 35 |
| GHD | PF17834 | 379 - 433 | 5.9e-25 | Beta-sandwich domain in beta galactosidase |
| BetaGal_gal-bd | PF21467 | 644 - 730 | 1.5e-25 | Beta-galactosidase, galactose-binding domain |
| SUEL_Lectin | PF02140 | 791 - 868 | 5.7e-23 | D-galactoside/L-rhamnose binding SUEL lectin domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2393 |
| Acc36I | ACCTGC | 2 cut(s) | 1877, 2595 |
| Acc65I | GGTACC | 1 cut(s) | 2151 |
| AccB1I | GGYRCC | 1 cut(s) | 2151 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2066, 2621 |
| AccBSI | CCGCTC | 1 cut(s) | 243 |
| AccI | GTMKAC | 2 cut(s) | 1098, 1373 |
| AccII | CGCG | 4 cut(s) | 50, 62, 99, 159 |
| AclI | AACGTT | 1 cut(s) | 1275 |
| AclWI | GGATC | 5 cut(s) | 214, 489, 1011, 1910, 1964 |
| AcoI | YGGCCR | 3 cut(s) | 901, 1609, 2023 |
| AcsI | RAATTY | 7 cut(s) | 419, 727, 1366, 1984, 2364, 2408, 2476 |
| AcuI | CTGAAG | 1 cut(s) | 1019 |
| AfaI | GTAC | 5 cut(s) | 269, 892, 1105, 1937, 2153 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 260, 989, 1299, 2014, 2066, 2566, 2567, 2621 |
| AflIII | ACRYGT | 2 cut(s) | 1093, 1765 |
| AgsI | TTSAA | 9 cut(s) | 70, 79, 278, 545, 815, 1285, 1855, 2184, 2238 |
| AjnI | CCWGG | 8 cut(s) | 409, 673, 1385, 1827, 1931, 2007, 2147, 2505 |
| Alw21I | GWGCWC | 2 cut(s) | 2120, 2272 |
| Alw26I | GTCTC | 2 cut(s) | 632, 2289 |
| AlwI | GGATC | 5 cut(s) | 214, 489, 1011, 1910, 1964 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1205 |
| AoxI | GGCC | 8 cut(s) | 176, 350, 806, 901, 917, 1609, 2005, 2023 |
| ApeKI | GCWGC | 5 cut(s) | 457, 608, 1013, 1046, 1654 |
| ApoI | RAATTY | 7 cut(s) | 419, 727, 1366, 1984, 2364, 2408, 2476 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1430, 2480 |
| Asp718I | GGTACC | 1 cut(s) | 2151 |
| AspA2I | CCTAGG | 1 cut(s) | 1216 |
| AspLEI | GCGC | 4 cut(s) | 101, 161, 365, 1306 |
| AspS9I | GGNCC | 7 cut(s) | 350, 521, 640, 917, 1076, 1474, 2005 |
| AsuC2I | CCSGG | 2 cut(s) | 389, 2567 |
| AsuHPI | GGTGA | 3 cut(s) | 1047, 1921, 2567 |
| AsuII | TTCGAA | 1 cut(s) | 2474 |
| AvaII | GGWCC | 4 cut(s) | 521, 640, 1076, 1474 |
| AvrII | CCTAGG | 1 cut(s) | 1216 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 694, 727, 1095, 1128 |
| BalI | TGGCCA | 2 cut(s) | 1611, 2025 |
| BanI | GGYRCC | 1 cut(s) | 2151 |
| BauI | CACGAG | 1 cut(s) | 248 |
| Bbv12I | GWGCWC | 2 cut(s) | 2120, 2272 |
| BbvI | GCAGC | 5 cut(s) | 469, 595, 1000, 1033, 1666 |
| BceAI | ACGGC | 1 cut(s) | 58 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1612, 1646 |
| BciT130I | CCWGG | 8 cut(s) | 411, 675, 1387, 1829, 1933, 2009, 2149, 2507 |
| BciVI | GTATCC | 2 cut(s) | 695, 710 |
| BcnI | CCSGG | 2 cut(s) | 389, 2567 |
| BcoDI | GTCTC | 2 cut(s) | 632, 2289 |
| BfaI | CTAG | 4 cut(s) | 321, 623, 1217, 1907 |
| BfmI | CTRYAG | 2 cut(s) | 536, 1267 |
| BfuAI | ACCTGC | 2 cut(s) | 1877, 2595 |
| BfuI | GTATCC | 2 cut(s) | 695, 710 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 805, 1962 |
| BglII | AGATCT | 1 cut(s) | 817 |
| BlnI | CCTAGG | 1 cut(s) | 1216 |
| BmcAI | AGTACT | 1 cut(s) | 269 |
| Bme18I | GGWCC | 4 cut(s) | 521, 640, 1076, 1474 |
| BmgT120I | GGNCC | 7 cut(s) | 350, 521, 640, 917, 1076, 1474, 2005 |
| BmiI | GGNNCC | 8 cut(s) | 11, 641, 642, 918, 1077, 1383, 2153, 2260 |
| BmrI | ACTGGG | 1 cut(s) | 1788 |
| BmuI | ACTGGG | 1 cut(s) | 1788 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1514, 1546 |
| BpmI | CTGGAG | 1 cut(s) | 657 |
| Bpu14I | TTCGAA | 1 cut(s) | 2474 |
| BpuEI | CTTGAG | 4 cut(s) | 1757, 2256, 2415, 2439 |
| BpuMI | CCSGG | 2 cut(s) | 389, 2567 |
| Bsa29I | ATCGAT | 2 cut(s) | 111, 1572 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1914, 2237 |
| BsaI | GGTCTC | 1 cut(s) | 632 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 318, 348 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 260, 989, 1299, 2014, 2066, 2566, 2567, 2621 |
| Bse118I | RCCGGY | 1 cut(s) | 140 |
| Bse1I | ACTGG | 6 cut(s) | 524, 933, 1159, 1346, 1783, 1973 |
| Bse3DI | GCAATG | 3 cut(s) | 703, 2381, 2437 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1914, 2237 |
| BseBI | CCWGG | 8 cut(s) | 411, 675, 1387, 1829, 1933, 2009, 2149, 2507 |
| BseCI | ATCGAT | 2 cut(s) | 111, 1572 |
| BseGI | GGATG | 7 cut(s) | 144, 220, 772, 776, 1395, 1919, 2075 |
| BseJI | GATNNNNATC | 2 cut(s) | 1914, 2237 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 260, 989, 1299, 2014, 2066, 2566, 2567, 2621 |
| BseMI | GCAATG | 3 cut(s) | 703, 2381, 2437 |
| BseMII | CTCAG | 6 cut(s) | 182, 603, 965, 1715, 1887, 2487 |
| BseNI | ACTGG | 6 cut(s) | 524, 933, 1159, 1346, 1783, 1973 |
| BseRI | GAGGAG | 1 cut(s) | 156 |
| BseXI | GCAGC | 5 cut(s) | 469, 595, 1000, 1033, 1666 |
| BseYI | CCCAGC | 1 cut(s) | 635 |
| BsgI | GTGCAG | 1 cut(s) | 1673 |
| Bsh1236I | CGCG | 4 cut(s) | 50, 62, 99, 159 |
| BshFI | GGCC | 8 cut(s) | 178, 352, 808, 903, 919, 1611, 2007, 2025 |
| BshNI | GGYRCC | 1 cut(s) | 2151 |
| BshVI | ATCGAT | 2 cut(s) | 111, 1572 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2120, 2272 |
| BsiSI | CCGG | 5 cut(s) | 7, 141, 389, 904, 2566 |
| BslFI | GGGAC | 4 cut(s) | 416, 626, 1005, 1089 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 260, 989, 1299, 2014, 2066, 2566, 2567, 2621 |
| BsmAI | GTCTC | 2 cut(s) | 632, 2289 |
| BsmFI | GGGAC | 4 cut(s) | 416, 626, 1005, 1089 |
| BsmI | GAATGC | 1 cut(s) | 1169 |
| BsnI | GGCC | 8 cut(s) | 178, 352, 808, 903, 919, 1611, 2007, 2025 |
| Bso31I | GGTCTC | 1 cut(s) | 632 |
| Bsp119I | TTCGAA | 1 cut(s) | 2474 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2120, 2272 |
| Bsp143I | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| Bsp19I | CCATGG | 3 cut(s) | 644, 1241, 1377 |
| BspANI | GGCC | 8 cut(s) | 178, 352, 808, 903, 919, 1611, 2007, 2025 |
| BspCNI | CTCAG | 6 cut(s) | 181, 604, 966, 1714, 1888, 2488 |
| BspDI | ATCGAT | 2 cut(s) | 111, 1572 |
| BspFNI | CGCG | 4 cut(s) | 50, 62, 99, 159 |
| BspLI | GGNNCC | 8 cut(s) | 11, 641, 642, 918, 1077, 1383, 2153, 2260 |
| BspMI | ACCTGC | 2 cut(s) | 1877, 2595 |
| BspPI | GGATC | 5 cut(s) | 214, 489, 1011, 1910, 1964 |
| BspQI | GCTCTTC | 2 cut(s) | 492, 1395 |
| BspT104I | TTCGAA | 1 cut(s) | 2474 |
| BspT107I | GGYRCC | 1 cut(s) | 2151 |
| BspTNI | GGTCTC | 1 cut(s) | 632 |
| BsrBI | CCGCTC | 1 cut(s) | 243 |
| BsrDI | GCAATG | 3 cut(s) | 703, 2381, 2437 |
| BsrFI | RCCGGY | 1 cut(s) | 140 |
| BsrI | ACTGG | 6 cut(s) | 524, 933, 1159, 1346, 1783, 1973 |
| BssAI | RCCGGY | 1 cut(s) | 140 |
| BssMI | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| BssNAI | GTATAC | 2 cut(s) | 1099, 1374 |
| BssSI | CACGAG | 1 cut(s) | 248 |
| BssT1I | CCWWGG | 5 cut(s) | 644, 1216, 1241, 1293, 1377 |
| Bst1107I | GTATAC | 2 cut(s) | 1099, 1374 |
| Bst2BI | CACGAG | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 8 cut(s) | 411, 675, 1387, 1829, 1933, 2009, 2149, 2507 |
| Bst4CI | ACNGT | 9 cut(s) | 267, 710, 1103, 1111, 1268, 1438, 1708, 2166, 2620 |
| Bst6I | CTCTTC | 4 cut(s) | 444, 492, 1347, 1395 |
| BstBI | TTCGAA | 1 cut(s) | 2474 |
| BstDEI | CTNAG | 7 cut(s) | 168, 612, 974, 1701, 1896, 2496, 2631 |
| BstDSI | CCRYGG | 5 cut(s) | 48, 644, 1241, 1377, 2162 |
| BstEII | GGTNACC | 1 cut(s) | 2555 |
| BstF5I | GGATG | 7 cut(s) | 144, 220, 772, 776, 1395, 1919, 2075 |
| BstFNI | CGCG | 4 cut(s) | 50, 62, 99, 159 |
| BstHHI | GCGC | 4 cut(s) | 101, 161, 365, 1306 |
| BstKTI | GATC | 8 cut(s) | 222, 484, 820, 1006, 1632, 1918, 1972, 2353 |
| BstMAI | GTCTC | 2 cut(s) | 632, 2289 |
| BstMBI | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| BstNI | CCWGG | 8 cut(s) | 411, 675, 1387, 1829, 1933, 2009, 2149, 2507 |
| BstNSI | RCATGY | 6 cut(s) | 130, 696, 1013, 1097, 1582, 1769 |
| BstPI | GGTNACC | 1 cut(s) | 2555 |
| BstSFI | CTRYAG | 2 cut(s) | 536, 1267 |
| BstUI | CGCG | 4 cut(s) | 50, 62, 99, 159 |
| BstV1I | GCAGC | 5 cut(s) | 469, 595, 1000, 1033, 1666 |
| BstX2I | RGATCY | 4 cut(s) | 481, 817, 1003, 1969 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 750, 2169 |
| BstYI | RGATCY | 4 cut(s) | 481, 817, 1003, 1969 |
| BstZ17I | GTATAC | 2 cut(s) | 1099, 1374 |
| Bsu15I | ATCGAT | 2 cut(s) | 111, 1572 |
| BsuI | GTATCC | 2 cut(s) | 695, 710 |
| BsuRI | GGCC | 8 cut(s) | 178, 352, 808, 903, 919, 1611, 2007, 2025 |
| BsuTUI | ATCGAT | 2 cut(s) | 111, 1572 |
| BtgI | CCRYGG | 5 cut(s) | 48, 644, 1241, 1377, 2162 |
| BtsCI | GGATG | 7 cut(s) | 144, 220, 772, 776, 1395, 1919, 2075 |
| BtsI | GCAGTG | 2 cut(s) | 1287, 1630 |
| BtsIMutI | CAGTG | 3 cut(s) | 1166, 1287, 1630 |
| BveI | ACCTGC | 2 cut(s) | 1877, 2595 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1205 |
| CfoI | GCGC | 4 cut(s) | 101, 161, 365, 1306 |
| Cfr10I | RCCGGY | 1 cut(s) | 140 |
| Cfr13I | GGNCC | 7 cut(s) | 350, 521, 640, 917, 1076, 1474, 2005 |
| Cfr42I | CCGCGG | 1 cut(s) | 51 |
| ClaI | ATCGAT | 2 cut(s) | 111, 1572 |
| CsiI | ACCWGGT | 3 cut(s) | 1827, 1931, 2147 |
| Csp6I | GTAC | 5 cut(s) | 268, 891, 1104, 1936, 2152 |
| CviQI | GTAC | 5 cut(s) | 268, 891, 1104, 1936, 2152 |
| DdeI | CTNAG | 7 cut(s) | 168, 612, 974, 1701, 1896, 2496, 2631 |
| DpnI | GATC | 8 cut(s) | 221, 483, 819, 1005, 1631, 1917, 1971, 2352 |
| DpnII | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| DraI | TTTAAA | 2 cut(s) | 1461, 1786 |
| EaeI | YGGCCR | 3 cut(s) | 901, 1609, 2023 |
| Eam1104I | CTCTTC | 4 cut(s) | 444, 492, 1347, 1395 |
| EarI | CTCTTC | 4 cut(s) | 444, 492, 1347, 1395 |
| EciI | GGCGGA | 2 cut(s) | 127, 227 |
| Eco130I | CCWWGG | 5 cut(s) | 644, 1216, 1241, 1293, 1377 |
| Eco147I | AGGCCT | 1 cut(s) | 808 |
| Eco31I | GGTCTC | 1 cut(s) | 632 |
| Eco32I | GATATC | 1 cut(s) | 292 |
| Eco47I | GGWCC | 4 cut(s) | 521, 640, 1076, 1474 |
| Eco57I | CTGAAG | 1 cut(s) | 1019 |
| Eco91I | GGTNACC | 1 cut(s) | 2555 |
| EcoO109I | RGGNCCY | 2 cut(s) | 350, 640 |
| EcoO65I | GGTNACC | 1 cut(s) | 2555 |
| EcoRI | GAATTC | 2 cut(s) | 419, 2476 |
| EcoRII | CCWGG | 8 cut(s) | 409, 673, 1385, 1827, 1931, 2007, 2147, 2505 |
| EcoRV | GATATC | 1 cut(s) | 292 |
| EcoT14I | CCWWGG | 5 cut(s) | 644, 1216, 1241, 1293, 1377 |
| EcoT22I | ATGCAT | 3 cut(s) | 235, 694, 781 |
| ErhI | CCWWGG | 5 cut(s) | 644, 1216, 1241, 1293, 1377 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1931, 1963 |
| FaqI | GGGAC | 4 cut(s) | 416, 626, 1005, 1089 |
| FauI | CCCGC | 2 cut(s) | 200, 393 |
| FauNDI | CATATG | 1 cut(s) | 574 |
| FblI | GTMKAC | 2 cut(s) | 1098, 1373 |
| FokI | GGATG | 7 cut(s) | 131, 227, 779, 783, 1402, 1906, 2082 |
| FspBI | CTAG | 4 cut(s) | 321, 623, 1217, 1907 |
| GlaI | GCGC | 4 cut(s) | 100, 160, 364, 1305 |
| GsaI | CCCAGC | 1 cut(s) | 639 |
| GsuI | CTGGAG | 1 cut(s) | 657 |
| HaeIII | GGCC | 8 cut(s) | 178, 352, 808, 903, 919, 1611, 2007, 2025 |
| HapII | CCGG | 5 cut(s) | 7, 141, 389, 904, 2566 |
| HhaI | GCGC | 4 cut(s) | 101, 161, 365, 1306 |
| Hin6I | GCGC | 4 cut(s) | 99, 159, 363, 1304 |
| HinP1I | GCGC | 4 cut(s) | 99, 159, 363, 1304 |
| HincII | GTYRAC | 1 cut(s) | 1698 |
| HindII | GTYRAC | 1 cut(s) | 1698 |
| HindIII | AAGCTT | 1 cut(s) | 1022 |
| HinfI | GANTC | 4 cut(s) | 327, 1052, 2221, 2282 |
| HpaI | GTTAAC | 1 cut(s) | 1698 |
| HpaII | CCGG | 5 cut(s) | 7, 141, 389, 904, 2566 |
| HphI | GGTGA | 3 cut(s) | 1047, 1921, 2567 |
| Hpy166II | GTNNAC | 7 cut(s) | 326, 980, 1099, 1114, 1327, 1374, 1698 |
| Hpy188III | TCNNGA | 5 cut(s) | 223, 248, 2302, 2318, 2381 |
| Hpy8I | GTNNAC | 7 cut(s) | 326, 980, 1099, 1114, 1327, 1374, 1698 |
| HpyAV | CCTTC | 5 cut(s) | 32, 197, 272, 583, 994 |
| HpyCH4III | ACNGT | 9 cut(s) | 267, 710, 1103, 1111, 1268, 1438, 1708, 2166, 2620 |
| HpyCH4IV | ACGT | 4 cut(s) | 81, 357, 850, 1275 |
| HpyF3I | CTNAG | 7 cut(s) | 168, 612, 974, 1701, 1896, 2496, 2631 |
| HpySE526I | ACGT | 4 cut(s) | 81, 357, 850, 1275 |
| HspAI | GCGC | 4 cut(s) | 99, 159, 363, 1304 |
| KflI | GGGWCCC | 1 cut(s) | 640 |
| KpnI | GGTACC | 1 cut(s) | 2155 |
| KroI | GCCGGC | 1 cut(s) | 140 |
| KroNI | GCCGGC | 1 cut(s) | 142 |
| KspAI | GTTAAC | 1 cut(s) | 1698 |
| KspI | CCGCGG | 1 cut(s) | 51 |
| Kzo9I | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| LguI | GCTCTTC | 2 cut(s) | 492, 1395 |
| LmnI | GCTCC | 9 cut(s) | 9, 15, 240, 317, 676, 858, 955, 1453, 2062 |
| Lsp1109I | GCAGC | 5 cut(s) | 469, 595, 1000, 1033, 1666 |
| MabI | ACCWGGT | 3 cut(s) | 1827, 1931, 2147 |
| MaeI | CTAG | 4 cut(s) | 321, 623, 1217, 1907 |
| MaeII | ACGT | 4 cut(s) | 81, 357, 850, 1275 |
| MaeIII | GTNAC | 5 cut(s) | 245, 1207, 1465, 2555, 2607 |
| MalI | GATC | 8 cut(s) | 221, 483, 819, 1005, 1631, 1917, 1971, 2352 |
| MbiI | CCGCTC | 1 cut(s) | 243 |
| MboI | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| MfeI | CAATTG | 1 cut(s) | 954 |
| MflI | RGATCY | 4 cut(s) | 481, 817, 1003, 1969 |
| MhlI | GDGCHC | 2 cut(s) | 2120, 2272 |
| MlsI | TGGCCA | 2 cut(s) | 1611, 2025 |
| MluNI | TGGCCA | 2 cut(s) | 1611, 2025 |
| MlyI | GAGTC | 2 cut(s) | 321, 2291 |
| MmeI | TCCRAC | 3 cut(s) | 871, 2236, 2509 |
| Mox20I | TGGCCA | 2 cut(s) | 1611, 2025 |
| Mph1103I | ATGCAT | 3 cut(s) | 235, 694, 781 |
| MroNI | GCCGGC | 1 cut(s) | 140 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1430, 2480 |
| MscI | TGGCCA | 2 cut(s) | 1611, 2025 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1461, 1816, 2167 |
| Msp20I | TGGCCA | 2 cut(s) | 1611, 2025 |
| MspA1I | CMGCKG | 2 cut(s) | 50, 460 |
| MspI | CCGG | 5 cut(s) | 7, 141, 389, 904, 2566 |
| MunI | CAATTG | 1 cut(s) | 954 |
| Mva1269I | GAATGC | 1 cut(s) | 1169 |
| MvaI | CCWGG | 8 cut(s) | 411, 675, 1387, 1829, 1933, 2009, 2149, 2507 |
| MvnI | CGCG | 4 cut(s) | 50, 62, 99, 159 |
| NaeI | GCCGGC | 1 cut(s) | 142 |
| NciI | CCSGG | 2 cut(s) | 389, 2567 |
| NcoI | CCATGG | 3 cut(s) | 644, 1241, 1377 |
| NdeI | CATATG | 1 cut(s) | 574 |
| NdeII | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| NgoMIV | GCCGGC | 1 cut(s) | 140 |
| NlaIV | GGNNCC | 8 cut(s) | 11, 641, 642, 918, 1077, 1383, 2153, 2260 |
| NmeAIII | GCCGAG | 1 cut(s) | 391 |
| NmuCI | GTSAC | 4 cut(s) | 245, 1465, 2555, 2607 |
| NsiI | ATGCAT | 3 cut(s) | 235, 694, 781 |
| NspI | RCATGY | 6 cut(s) | 130, 696, 1013, 1097, 1582, 1769 |
| NspV | TTCGAA | 1 cut(s) | 2474 |
| PaeI | GCATGC | 4 cut(s) | 130, 696, 1013, 1582 |
| PceI | AGGCCT | 1 cut(s) | 808 |
| PciI | ACATGT | 2 cut(s) | 1093, 1765 |
| PciSI | GCTCTTC | 2 cut(s) | 492, 1395 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 87, 363 |
| PctI | GAATGC | 1 cut(s) | 1169 |
| PdiI | GCCGGC | 1 cut(s) | 142 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1430, 2480 |
| PfeI | GAWTC | 2 cut(s) | 1052, 2221 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2066, 2621 |
| PfoI | TCCNGGA | 1 cut(s) | 673 |
| PleI | GAGTC | 2 cut(s) | 321, 2290 |
| PpsI | GAGTC | 2 cut(s) | 321, 2290 |
| PpuMI | RGGWCCY | 1 cut(s) | 640 |
| PscI | ACATGT | 2 cut(s) | 1093, 1765 |
| PsiI | TTATAA | 1 cut(s) | 2393 |
| Psp1406I | AACGTT | 1 cut(s) | 1275 |
| Psp5II | RGGWCCY | 1 cut(s) | 640 |
| Psp6I | CCWGG | 8 cut(s) | 409, 673, 1385, 1827, 1931, 2007, 2147, 2505 |
| PspEI | GGTNACC | 1 cut(s) | 2555 |
| PspFI | CCCAGC | 1 cut(s) | 635 |
| PspGI | CCWGG | 8 cut(s) | 409, 673, 1385, 1827, 1931, 2007, 2147, 2505 |
| PspN4I | GGNNCC | 8 cut(s) | 11, 641, 642, 918, 1077, 1383, 2153, 2260 |
| PspPI | GGNCC | 7 cut(s) | 350, 521, 640, 917, 1076, 1474, 2005 |
| PspPPI | RGGWCCY | 1 cut(s) | 640 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1205 |
| PsuI | RGATCY | 4 cut(s) | 481, 817, 1003, 1969 |
| RsaI | GTAC | 5 cut(s) | 269, 892, 1105, 1937, 2153 |
| RsaNI | GTAC | 5 cut(s) | 268, 891, 1104, 1936, 2152 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1461, 1816, 2167 |
| SacII | CCGCGG | 1 cut(s) | 51 |
| SapI | GCTCTTC | 2 cut(s) | 492, 1395 |
| Sau3AI | GATC | 8 cut(s) | 219, 481, 817, 1003, 1629, 1915, 1969, 2350 |
| Sau96I | GGNCC | 7 cut(s) | 350, 521, 640, 917, 1076, 1474, 2005 |
| ScaI | AGTACT | 1 cut(s) | 269 |
| SchI | GAGTC | 2 cut(s) | 321, 2291 |
| SduI | GDGCHC | 2 cut(s) | 2120, 2272 |
| SexAI | ACCWGGT | 3 cut(s) | 1827, 1931, 2147 |
| SfcI | CTRYAG | 2 cut(s) | 536, 1267 |
| Sfr303I | CCGCGG | 1 cut(s) | 51 |
| SfuI | TTCGAA | 1 cut(s) | 2474 |
| SgrBI | CCGCGG | 1 cut(s) | 51 |
| SinI | GGWCC | 4 cut(s) | 521, 640, 1076, 1474 |
| SmiI | ATTTAAAT | 1 cut(s) | 1461 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1461, 1816, 2167 |
| SmlI | CTYRAG | 4 cut(s) | 1736, 2271, 2430, 2454 |
| SmoI | CTYRAG | 4 cut(s) | 1736, 2271, 2430, 2454 |
| SphI | GCATGC | 4 cut(s) | 130, 696, 1013, 1582 |
| SseBI | AGGCCT | 1 cut(s) | 808 |
| SspI | AATATT | 3 cut(s) | 1449, 1509, 1552 |
| SspMI | CTAG | 4 cut(s) | 321, 623, 1217, 1907 |
| StuI | AGGCCT | 1 cut(s) | 808 |
| StyI | CCWWGG | 5 cut(s) | 644, 1216, 1241, 1293, 1377 |
| SwaI | ATTTAAAT | 1 cut(s) | 1461 |
| TaaI | ACNGT | 9 cut(s) | 267, 710, 1103, 1111, 1268, 1438, 1708, 2166, 2620 |
| TaiI | ACGT | 4 cut(s) | 84, 360, 853, 1278 |
| TaqI | TCGA | 4 cut(s) | 111, 1572, 2092, 2474 |
| TaqII | GACCGA | 1 cut(s) | 1622 |
| TatI | WGTACW | 1 cut(s) | 267 |
| TauI | GCSGC | 5 cut(s) | 50, 59, 62, 126, 256 |
| TfiI | GAWTC | 2 cut(s) | 1052, 2221 |
| TscAI | CASTG | 3 cut(s) | 1166, 1294, 1630 |
| TseFI | GTSAC | 4 cut(s) | 245, 1465, 2555, 2607 |
| TseI | GCWGC | 5 cut(s) | 457, 608, 1013, 1046, 1654 |
| Tsp45I | GTSAC | 4 cut(s) | 245, 1465, 2555, 2607 |
| TspDTI | ATGAA | 5 cut(s) | 564, 720, 975, 1203, 2346 |
| TspGWI | ACGGA | 1 cut(s) | 2214 |
| TspRI | CASTG | 3 cut(s) | 1166, 1294, 1630 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2066, 2621 |
| VpaK11BI | GGWCC | 4 cut(s) | 521, 640, 1076, 1474 |
| XapI | RAATTY | 7 cut(s) | 419, 727, 1366, 1984, 2364, 2408, 2476 |
| XceI | RCATGY | 6 cut(s) | 130, 696, 1013, 1097, 1582, 1769 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1413 |
| XmaJI | CCTAGG | 1 cut(s) | 1216 |
| XmiI | GTMKAC | 2 cut(s) | 1098, 1373 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1430, 2480 |
| XspI | CTAG | 4 cut(s) | 321, 623, 1217, 1907 |
| ZrmI | AGTACT | 1 cut(s) | 269 |
| Zsp2I | ATGCAT | 3 cut(s) | 235, 694, 781 |