Homeodomain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 2006, 2297 |
| Acc16I | TGCGCA | 1 cut(s) | 1640 |
| AccB1I | GGYRCC | 2 cut(s) | 353, 1124 |
| AccI | GTMKAC | 1 cut(s) | 1977 |
| AccII | CGCG | 1 cut(s) | 1130 |
| AciI | CCGC | 9 cut(s) | 54, 262, 348, 351, 474, 542, 1020, 1128, 1130 |
| AclWI | GGATC | 2 cut(s) | 142, 1798 |
| AcoI | YGGCCR | 3 cut(s) | 60, 789, 1131 |
| AcsI | RAATTY | 1 cut(s) | 17 |
| AcuI | CTGAAG | 3 cut(s) | 207, 658, 2271 |
| AcyI | GRCGYC | 1 cut(s) | 1539 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 375, 430, 845, 1609, 2258 |
| AflIII | ACRYGT | 1 cut(s) | 960 |
| AjiI | CACGTC | 1 cut(s) | 609 |
| AjnI | CCWGG | 2 cut(s) | 130, 1407 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 408, 440, 1127, 1159 |
| Alw21I | GWGCWC | 4 cut(s) | 608, 666, 1467, 1622 |
| Alw26I | GTCTC | 4 cut(s) | 76, 388, 1547, 2151 |
| Alw44I | GTGCAC | 2 cut(s) | 604, 1618 |
| AlwI | GGATC | 2 cut(s) | 142, 1798 |
| AoxI | GGCC | 6 cut(s) | 60, 789, 1131, 1211, 1600, 1859 |
| ApaLI | GTGCAC | 2 cut(s) | 604, 1618 |
| ApeKI | GCWGC | 6 cut(s) | 227, 500, 1008, 1625, 1807, 2147 |
| ApoI | RAATTY | 1 cut(s) | 17 |
| AseI | ATTAAT | 1 cut(s) | 1917 |
| AspLEI | GCGC | 3 cut(s) | 1440, 1641, 1680 |
| AspS9I | GGNCC | 7 cut(s) | 134, 170, 1152, 1211, 1331, 1379, 1859 |
| AsuHPI | GGTGA | 4 cut(s) | 1383, 1406, 1939, 2205 |
| AsuII | TTCGAA | 1 cut(s) | 1146 |
| AsuNHI | GCTAGC | 1 cut(s) | 1783 |
| AvaII | GGWCC | 5 cut(s) | 134, 170, 1152, 1331, 1379 |
| AxyI | CCTNAGG | 1 cut(s) | 735 |
| BaeGI | GKGCMC | 2 cut(s) | 608, 1622 |
| BalI | TGGCCA | 1 cut(s) | 791 |
| BanI | GGYRCC | 2 cut(s) | 353, 1124 |
| BanII | GRGCYC | 1 cut(s) | 1467 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 914, 946 |
| BauI | CACGAG | 2 cut(s) | 983, 1960 |
| BbsI | GAAGAC | 2 cut(s) | 540, 2002 |
| Bbv12I | GWGCWC | 4 cut(s) | 608, 666, 1467, 1622 |
| BbvCI | CCTCAGC | 1 cut(s) | 1629 |
| BbvI | GCAGC | 6 cut(s) | 214, 512, 1020, 1612, 1819, 2159 |
| BccI | CCATC | 2 cut(s) | 1679, 1687 |
| BceAI | ACGGC | 3 cut(s) | 47, 870, 1645 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 757, 791 |
| BciT130I | CCWGG | 2 cut(s) | 132, 1409 |
| BcoDI | GTCTC | 4 cut(s) | 76, 388, 1547, 2151 |
| BfaI | CTAG | 7 cut(s) | 50, 152, 497, 644, 1752, 1784, 1815 |
| BfmI | CTRYAG | 3 cut(s) | 1006, 1548, 1944 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 59 |
| BglII | AGATCT | 1 cut(s) | 2272 |
| BmcAI | AGTACT | 3 cut(s) | 1279, 1756, 1891 |
| Bme1390I | CCNGG | 2 cut(s) | 132, 1409 |
| Bme18I | GGWCC | 5 cut(s) | 134, 170, 1152, 1331, 1379 |
| BmgBI | CACGTC | 1 cut(s) | 609 |
| BmgT120I | GGNCC | 7 cut(s) | 134, 170, 1152, 1211, 1331, 1379, 1859 |
| BmiI | GGNNCC | 5 cut(s) | 136, 355, 367, 1126, 1154 |
| BmrFI | CCNGG | 2 cut(s) | 132, 1409 |
| BmrI | ACTGGG | 2 cut(s) | 476, 2267 |
| BmsI | GCATC | 6 cut(s) | 273, 714, 813, 1011, 1310, 1681 |
| BmtI | GCTAGC | 1 cut(s) | 1787 |
| BmuI | ACTGGG | 2 cut(s) | 476, 2267 |
| BpiI | GAAGAC | 2 cut(s) | 540, 2002 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1629 |
| Bpu14I | TTCGAA | 1 cut(s) | 1146 |
| BpuEI | CTTGAG | 1 cut(s) | 98 |
| Bsa29I | ATCGAT | 1 cut(s) | 755 |
| BsaHI | GRCGYC | 1 cut(s) | 1539 |
| BsaI | GGTCTC | 2 cut(s) | 388, 1547 |
| BsaJI | CCNNGG | 3 cut(s) | 57, 424, 1128 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 375, 430, 845, 1609, 2258 |
| Bse1I | ACTGG | 5 cut(s) | 482, 561, 792, 1290, 2262 |
| Bse21I | CCTNAGG | 1 cut(s) | 735 |
| Bse3DI | GCAATG | 4 cut(s) | 138, 300, 1513, 2047 |
| BseBI | CCWGG | 2 cut(s) | 132, 1409 |
| BseCI | ATCGAT | 1 cut(s) | 755 |
| BseDI | CCNNGG | 3 cut(s) | 57, 424, 1128 |
| BseGI | GGATG | 4 cut(s) | 10, 264, 1325, 1618 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 375, 430, 845, 1609, 2258 |
| BseMI | GCAATG | 4 cut(s) | 138, 300, 1513, 2047 |
| BseMII | CTCAG | 9 cut(s) | 158, 372, 500, 537, 726, 1265, 1287, 1371, 1620 |
| BseNI | ACTGG | 5 cut(s) | 482, 561, 792, 1290, 2262 |
| BseSI | GKGCMC | 2 cut(s) | 608, 1622 |
| BseXI | GCAGC | 6 cut(s) | 214, 512, 1020, 1612, 1819, 2159 |
| BseYI | CCCAGC | 1 cut(s) | 1315 |
| BsgI | GTGCAG | 2 cut(s) | 213, 537 |
| Bsh1236I | CGCG | 1 cut(s) | 1130 |
| BshFI | GGCC | 6 cut(s) | 62, 791, 1133, 1213, 1602, 1861 |
| BshNI | GGYRCC | 2 cut(s) | 353, 1124 |
| BshVI | ATCGAT | 1 cut(s) | 755 |
| BsiHKAI | GWGCWC | 4 cut(s) | 608, 666, 1467, 1622 |
| BslFI | GGGAC | 4 cut(s) | 120, 958, 2146, 2180 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 375, 430, 845, 1609, 2258 |
| BsmAI | GTCTC | 4 cut(s) | 76, 388, 1547, 2151 |
| BsmFI | GGGAC | 4 cut(s) | 120, 958, 2146, 2180 |
| BsmI | GAATGC | 3 cut(s) | 78, 833, 1560 |
| BsnI | GGCC | 6 cut(s) | 62, 791, 1133, 1213, 1602, 1861 |
| Bso31I | GGTCTC | 2 cut(s) | 388, 1547 |
| Bsp119I | TTCGAA | 1 cut(s) | 1146 |
| Bsp1286I | GDGCHC | 4 cut(s) | 608, 666, 1467, 1622 |
| Bsp1407I | TGTACA | 1 cut(s) | 2172 |
| Bsp143I | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| Bsp19I | CCATGG | 1 cut(s) | 57 |
| BspACI | CCGC | 9 cut(s) | 54, 262, 348, 351, 474, 542, 1020, 1128, 1130 |
| BspANI | GGCC | 6 cut(s) | 62, 791, 1133, 1213, 1602, 1861 |
| BspCNI | CTCAG | 9 cut(s) | 157, 371, 501, 536, 727, 1266, 1288, 1370, 1621 |
| BspDI | ATCGAT | 1 cut(s) | 755 |
| BspFNI | CGCG | 1 cut(s) | 1130 |
| BspHI | TCATGA | 2 cut(s) | 594, 1459 |
| BspLI | GGNNCC | 5 cut(s) | 136, 355, 367, 1126, 1154 |
| BspMAI | CTGCAG | 1 cut(s) | 1010 |
| BspOI | GCTAGC | 1 cut(s) | 1787 |
| BspPI | GGATC | 2 cut(s) | 142, 1798 |
| BspT104I | TTCGAA | 1 cut(s) | 1146 |
| BspT107I | GGYRCC | 2 cut(s) | 353, 1124 |
| BspTNI | GGTCTC | 2 cut(s) | 388, 1547 |
| BsrDI | GCAATG | 4 cut(s) | 138, 300, 1513, 2047 |
| BsrGI | TGTACA | 1 cut(s) | 2172 |
| BsrI | ACTGG | 5 cut(s) | 482, 561, 792, 1290, 2262 |
| BssECI | CCNNGG | 3 cut(s) | 57, 424, 1128 |
| BssMI | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| BssNI | GRCGYC | 1 cut(s) | 1539 |
| BssSI | CACGAG | 2 cut(s) | 983, 1960 |
| BssT1I | CCWWGG | 2 cut(s) | 57, 424 |
| Bst2BI | CACGAG | 2 cut(s) | 983, 1960 |
| Bst2UI | CCWGG | 2 cut(s) | 132, 1409 |
| Bst6I | CTCTTC | 2 cut(s) | 275, 1488 |
| BstACI | GRCGYC | 1 cut(s) | 1539 |
| BstAUI | TGTACA | 1 cut(s) | 2172 |
| BstBI | TTCGAA | 1 cut(s) | 1146 |
| BstC8I | GCNNGC | 6 cut(s) | 346, 814, 826, 1104, 1600, 1785 |
| BstDSI | CCRYGG | 2 cut(s) | 57, 1128 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 428, 843, 1607 |
| BstF5I | GGATG | 4 cut(s) | 10, 264, 1325, 1618 |
| BstFNI | CGCG | 1 cut(s) | 1130 |
| BstHHI | GCGC | 3 cut(s) | 1440, 1641, 1680 |
| BstKTI | GATC | 7 cut(s) | 150, 600, 1111, 1650, 1793, 1870, 2275 |
| BstMAI | GTCTC | 4 cut(s) | 76, 388, 1547, 2151 |
| BstMBI | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 59, 473, 830, 1008, 1017, 1312, 1538, 2200 |
| BstNI | CCWGG | 2 cut(s) | 132, 1409 |
| BstNSI | RCATGY | 4 cut(s) | 348, 964, 1106, 1838 |
| BstSCI | CCNGG | 2 cut(s) | 130, 1407 |
| BstSFI | CTRYAG | 3 cut(s) | 1006, 1548, 1944 |
| BstSLI | GKGCMC | 2 cut(s) | 608, 1622 |
| BstUI | CGCG | 1 cut(s) | 1130 |
| BstV1I | GCAGC | 6 cut(s) | 214, 512, 1020, 1612, 1819, 2159 |
| BstV2I | GAAGAC | 2 cut(s) | 540, 2002 |
| BstX2I | RGATCY | 3 cut(s) | 147, 1790, 2272 |
| BstYI | RGATCY | 3 cut(s) | 147, 1790, 2272 |
| Bsu15I | ATCGAT | 1 cut(s) | 755 |
| Bsu36I | CCTNAGG | 1 cut(s) | 735 |
| BsuRI | GGCC | 6 cut(s) | 62, 791, 1133, 1213, 1602, 1861 |
| BsuTUI | ATCGAT | 1 cut(s) | 755 |
| BtgI | CCRYGG | 2 cut(s) | 57, 1128 |
| BtgZI | GCGATG | 2 cut(s) | 430, 1500 |
| BtrI | CACGTC | 1 cut(s) | 609 |
| BtsCI | GGATG | 4 cut(s) | 10, 264, 1325, 1618 |
| BtsI | GCAGTG | 1 cut(s) | 1620 |
| BtsIMutI | CAGTG | 9 cut(s) | 554, 1066, 1197, 1271, 1365, 1620, 1824, 2148, 2308 |
| Cac8I | GCNNGC | 6 cut(s) | 346, 814, 826, 1104, 1600, 1785 |
| CciI | TCATGA | 2 cut(s) | 594, 1459 |
| CfoI | GCGC | 3 cut(s) | 1440, 1641, 1680 |
| Cfr13I | GGNCC | 7 cut(s) | 134, 170, 1152, 1211, 1331, 1379, 1859 |
| Cfr42I | CCGCGG | 1 cut(s) | 1131 |
| ClaI | ATCGAT | 1 cut(s) | 755 |
| CseI | GACGC | 3 cut(s) | 543, 1547, 2079 |
| CsiI | ACCWGGT | 1 cut(s) | 130 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2284, 2319 |
| DpnI | GATC | 7 cut(s) | 149, 599, 1110, 1649, 1792, 1869, 2274 |
| DpnII | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2006, 2297 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2006, 2297 |
| EaeI | YGGCCR | 3 cut(s) | 60, 789, 1131 |
| Eam1104I | CTCTTC | 2 cut(s) | 275, 1488 |
| EarI | CTCTTC | 2 cut(s) | 275, 1488 |
| EciI | GGCGGA | 1 cut(s) | 463 |
| Ecl136II | GAGCTC | 1 cut(s) | 1465 |
| Eco130I | CCWWGG | 2 cut(s) | 57, 424 |
| Eco24I | GRGCYC | 1 cut(s) | 1467 |
| Eco31I | GGTCTC | 2 cut(s) | 388, 1547 |
| Eco47I | GGWCC | 5 cut(s) | 134, 170, 1152, 1331, 1379 |
| Eco53kI | GAGCTC | 1 cut(s) | 1465 |
| Eco57I | CTGAAG | 3 cut(s) | 207, 658, 2271 |
| Eco81I | CCTNAGG | 1 cut(s) | 735 |
| EcoICRI | GAGCTC | 1 cut(s) | 1465 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 428, 843, 1607 |
| EcoO109I | RGGNCCY | 4 cut(s) | 134, 170, 1379, 1859 |
| EcoRII | CCWGG | 2 cut(s) | 130, 1407 |
| EcoT14I | CCWWGG | 2 cut(s) | 57, 424 |
| EcoT38I | GRGCYC | 1 cut(s) | 1467 |
| ErhI | CCWWGG | 2 cut(s) | 57, 424 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 194, 226 |
| FaqI | GGGAC | 4 cut(s) | 120, 958, 2146, 2180 |
| FblI | GTMKAC | 1 cut(s) | 1977 |
| FokI | GGATG | 4 cut(s) | 17, 251, 1332, 1625 |
| FriOI | GRGCYC | 1 cut(s) | 1467 |
| FspBI | CTAG | 7 cut(s) | 50, 152, 497, 644, 1752, 1784, 1815 |
| FspI | TGCGCA | 1 cut(s) | 1640 |
| GlaI | GCGC | 3 cut(s) | 1439, 1640, 1679 |
| GsaI | CCCAGC | 1 cut(s) | 1319 |
| HaeIII | GGCC | 6 cut(s) | 62, 791, 1133, 1213, 1602, 1861 |
| HgaI | GACGC | 3 cut(s) | 543, 1547, 2079 |
| HhaI | GCGC | 3 cut(s) | 1440, 1641, 1680 |
| Hin1I | GRCGYC | 1 cut(s) | 1539 |
| Hin6I | GCGC | 3 cut(s) | 1438, 1639, 1678 |
| HinP1I | GCGC | 3 cut(s) | 1438, 1639, 1678 |
| HincII | GTYRAC | 4 cut(s) | 128, 490, 1537, 1590 |
| HindII | GTYRAC | 4 cut(s) | 128, 490, 1537, 1590 |
| HinfI | GANTC | 6 cut(s) | 757, 1051, 1735, 1935, 1949, 1979 |
| HphI | GGTGA | 4 cut(s) | 1383, 1406, 1939, 2205 |
| Hpy188I | TCNGA | 5 cut(s) | 147, 526, 1856, 1984, 2290 |
| Hpy188III | TCNNGA | 6 cut(s) | 177, 595, 612, 1460, 1871, 2252 |
| HpyCH4IV | ACGT | 2 cut(s) | 608, 2298 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 59, 473, 830, 1008, 1017, 1312, 1538, 2200 |
| HpySE526I | ACGT | 2 cut(s) | 608, 2298 |
| Hsp92I | GRCGYC | 1 cut(s) | 1539 |
| HspAI | GCGC | 3 cut(s) | 1438, 1639, 1678 |
| KspI | CCGCGG | 1 cut(s) | 1131 |
| Kzo9I | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| LmnI | GCTCC | 1 cut(s) | 365 |
| Lsp1109I | GCAGC | 6 cut(s) | 214, 512, 1020, 1612, 1819, 2159 |
| LweI | GCATC | 6 cut(s) | 273, 714, 813, 1011, 1310, 1681 |
| MabI | ACCWGGT | 1 cut(s) | 130 |
| MaeI | CTAG | 7 cut(s) | 50, 152, 497, 644, 1752, 1784, 1815 |
| MaeII | ACGT | 2 cut(s) | 608, 2298 |
| MaeIII | GTNAC | 1 cut(s) | 956 |
| MalI | GATC | 7 cut(s) | 149, 599, 1110, 1649, 1792, 1869, 2274 |
| MboI | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| MfeI | CAATTG | 1 cut(s) | 1247 |
| MflI | RGATCY | 3 cut(s) | 147, 1790, 2272 |
| MhlI | GDGCHC | 4 cut(s) | 608, 666, 1467, 1622 |
| MlsI | TGGCCA | 1 cut(s) | 791 |
| MluNI | TGGCCA | 1 cut(s) | 791 |
| MlyI | GAGTC | 1 cut(s) | 1973 |
| MmeI | TCCRAC | 3 cut(s) | 990, 2083, 2248 |
| Mox20I | TGGCCA | 1 cut(s) | 791 |
| MscI | TGGCCA | 1 cut(s) | 791 |
| MseI | TTAA | 4 cut(s) | 1373, 1917, 2064, 2219 |
| MslI | CAYNNNNRTG | 2 cut(s) | 449, 2228 |
| Msp20I | TGGCCA | 1 cut(s) | 791 |
| MspA1I | CMGCKG | 3 cut(s) | 227, 1130, 1810 |
| MspR9I | CCNGG | 2 cut(s) | 132, 1409 |
| MunI | CAATTG | 1 cut(s) | 1247 |
| Mva1269I | GAATGC | 3 cut(s) | 78, 833, 1560 |
| MvaI | CCWGG | 2 cut(s) | 132, 1409 |
| MvnI | CGCG | 1 cut(s) | 1130 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 59, 473, 830, 1008, 1017, 1312, 1538, 2200 |
| NcoI | CCATGG | 1 cut(s) | 57 |
| NdeII | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| NheI | GCTAGC | 1 cut(s) | 1783 |
| NlaIV | GGNNCC | 5 cut(s) | 136, 355, 367, 1126, 1154 |
| NsbI | TGCGCA | 1 cut(s) | 1640 |
| NspI | RCATGY | 4 cut(s) | 348, 964, 1106, 1838 |
| NspV | TTCGAA | 1 cut(s) | 1146 |
| PaeI | GCATGC | 2 cut(s) | 348, 1106 |
| PagI | TCATGA | 2 cut(s) | 594, 1459 |
| PciI | ACATGT | 1 cut(s) | 960 |
| PctI | GAATGC | 3 cut(s) | 78, 833, 1560 |
| PfeI | GAWTC | 5 cut(s) | 757, 1051, 1735, 1935, 1949 |
| PflFI | GACNNNGTC | 2 cut(s) | 1335, 1826 |
| PleI | GAGTC | 1 cut(s) | 1973 |
| PpsI | GAGTC | 1 cut(s) | 1973 |
| PpuMI | RGGWCCY | 3 cut(s) | 134, 170, 1379 |
| PscI | ACATGT | 1 cut(s) | 960 |
| PshBI | ATTAAT | 1 cut(s) | 1917 |
| Psp124BI | GAGCTC | 1 cut(s) | 1467 |
| Psp5II | RGGWCCY | 3 cut(s) | 134, 170, 1379 |
| Psp6I | CCWGG | 2 cut(s) | 130, 1407 |
| PspFI | CCCAGC | 1 cut(s) | 1315 |
| PspGI | CCWGG | 2 cut(s) | 130, 1407 |
| PspN4I | GGNNCC | 5 cut(s) | 136, 355, 367, 1126, 1154 |
| PspPI | GGNCC | 7 cut(s) | 134, 170, 1152, 1211, 1331, 1379, 1859 |
| PspPPI | RGGWCCY | 3 cut(s) | 134, 170, 1379 |
| PstI | CTGCAG | 1 cut(s) | 1010 |
| PsuI | RGATCY | 3 cut(s) | 147, 1790, 2272 |
| PsyI | GACNNNGTC | 2 cut(s) | 1335, 1826 |
| PvuII | CAGCTG | 2 cut(s) | 227, 1810 |
| RseI | CAYNNNNRTG | 2 cut(s) | 449, 2228 |
| SacI | GAGCTC | 1 cut(s) | 1467 |
| SacII | CCGCGG | 1 cut(s) | 1131 |
| SaqAI | TTAA | 4 cut(s) | 1373, 1917, 2064, 2219 |
| Sau3AI | GATC | 7 cut(s) | 147, 597, 1108, 1647, 1790, 1867, 2272 |
| Sau96I | GGNCC | 7 cut(s) | 134, 170, 1152, 1211, 1331, 1379, 1859 |
| ScaI | AGTACT | 3 cut(s) | 1279, 1756, 1891 |
| SchI | GAGTC | 1 cut(s) | 1973 |
| ScrFI | CCNGG | 2 cut(s) | 132, 1409 |
| SduI | GDGCHC | 4 cut(s) | 608, 666, 1467, 1622 |
| SexAI | ACCWGGT | 1 cut(s) | 130 |
| SfaNI | GCATC | 6 cut(s) | 273, 714, 813, 1011, 1310, 1681 |
| SfcI | CTRYAG | 3 cut(s) | 1006, 1548, 1944 |
| Sfr303I | CCGCGG | 1 cut(s) | 1131 |
| SfuI | TTCGAA | 1 cut(s) | 1146 |
| SgrBI | CCGCGG | 1 cut(s) | 1131 |
| SinI | GGWCC | 5 cut(s) | 134, 170, 1152, 1331, 1379 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 449, 2228 |
| SmlI | CTYRAG | 1 cut(s) | 113 |
| SmoI | CTYRAG | 1 cut(s) | 113 |
| SphI | GCATGC | 2 cut(s) | 348, 1106 |
| SsiI | CCGC | 9 cut(s) | 54, 262, 348, 351, 474, 542, 1020, 1128, 1130 |
| SspMI | CTAG | 7 cut(s) | 50, 152, 497, 644, 1752, 1784, 1815 |
| SstI | GAGCTC | 1 cut(s) | 1467 |
| StyD4I | CCNGG | 2 cut(s) | 130, 1407 |
| StyI | CCWWGG | 2 cut(s) | 57, 424 |
| TaiI | ACGT | 2 cut(s) | 611, 2301 |
| TaqI | TCGA | 6 cut(s) | 755, 1146, 1309, 1422, 1467, 1894 |
| TatI | WGTACW | 5 cut(s) | 901, 1277, 1754, 1889, 2172 |
| TauI | GCSGC | 5 cut(s) | 56, 264, 351, 1023, 1133 |
| TfiI | GAWTC | 5 cut(s) | 757, 1051, 1735, 1935, 1949 |
| Tru1I | TTAA | 4 cut(s) | 1373, 1917, 2064, 2219 |
| Tru9I | TTAA | 4 cut(s) | 1373, 1917, 2064, 2219 |
| TscAI | CASTG | 9 cut(s) | 561, 1066, 1204, 1278, 1365, 1627, 1831, 2148, 2308 |
| TseI | GCWGC | 6 cut(s) | 227, 500, 1008, 1625, 1807, 2147 |
| TspDTI | ATGAA | 8 cut(s) | 262, 298, 583, 1108, 1247, 1491, 1985, 2002 |
| TspGWI | ACGGA | 1 cut(s) | 1732 |
| TspRI | CASTG | 9 cut(s) | 561, 1066, 1204, 1278, 1365, 1627, 1831, 2148, 2308 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1335, 1826 |
| VneI | GTGCAC | 2 cut(s) | 604, 1618 |
| VpaK11BI | GGWCC | 5 cut(s) | 134, 170, 1152, 1331, 1379 |
| VspI | ATTAAT | 1 cut(s) | 1917 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 428, 843, 1607 |
| XapI | RAATTY | 1 cut(s) | 17 |
| XceI | RCATGY | 4 cut(s) | 348, 964, 1106, 1838 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 376 |
| XmiI | GTMKAC | 1 cut(s) | 1977 |
| XspI | CTAG | 7 cut(s) | 50, 152, 497, 644, 1752, 1784, 1815 |
| ZrmI | AGTACT | 3 cut(s) | 1279, 1756, 1891 |