Rorug01G0066100

Homeodomain

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
10724590 .. 10729872
5283 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0066100.1

Sequence Viewer

Length: 1755 bp
ATGGAAACCCTAGCCGCCGTCAGCTCCCGTCAGCTGACGTCAACTCTCGCATTGCCGTCCACCGTCACCGTCAATTTCAACGGCCGAGTCTGCAGCTCTCTACCTCTGCTTCGCTCCACCGCGCGTGTCCGTTCACTCAGATGCTCCGCTATTTCGTCTCTTTCACTGAGCAGTCAGAGGTTTTTCGAGGCTTCGAAAAATGGGAATTTAATTCCTTTATACCGAAGTATATTTTCGGATCACTTAACTCCTGTGCTTGCTTACCGGTGTCTGGTTAAGGAGGATGATAGAGACGCTCCGAGTTTTCTTTTTGAGGCAGTTGATCCGGGTTTCAAGGACTCCAATGTTGGGCGGTACAGTATTATTGGAGCGCAACCAACTATTGAGATCGTAGCAAAAGAGAACATGGTTACAGTTATGGACCATAGAGAAGGGCGTAGGACAGAGGAGATTGTGGAGGATCCAATGACTGTTCCTCAGAGAATCACGGAGGGATGGATACCGCAACGTCTTGATGAGATGCCAGAAGCATTTTGTGGTGGATGGGTTGGTTACTTCTCTTATGATACAGTGCGTTATGTGGAGAAGAAAAAGCTGCCATTCAGTGGTGCACCACCAGATGACAGAAATCTTCCTGATCTTCATCTTGGCCTGTATGATAGTGTGATAGTGTTTGATCATGTGGAGAAGAAAGCACATGTAATTCACTGGGTGCAATTAGATCGGTATTCTTCAGTTGAGGAGGCCTTCAATGATGGGATGAATAGATTGGAAACACTGGTATCTAGAGTGCATGACATTATCACCCCGAGGCTGCCTGCAGGTTCAATAAAGTTACACACTCATCTATTTGGTGCTAAATTGGAGGATTCAAACATGACAAGTGAGGAATACAAGGAAGCAGTTTTGAAATCTAAAGAACACATCTTAGCTGGGGATATATTTCAGATAGTATTAAGTCAGCGCTTTGAAAGGCGAACATTTGCAGACCCATTCGAAATTTACCGATCGTTAAGGATAGTTAATCCGAGTCCATACATGACTTATTTACAGGGTAGAGGCTGTATTCTGGTTGCTTCAAGTCCAGAAATTCTTACACGTGTTAAGAATAGAACAATCACCAATCGACCTCTTGCTGGGACTGTTAGAAGAGGAAAAACACCTAAAGAAGATCTAATGTTGGAAAATCAGCTTTTGAATGATGAAAAGCAATGCGCAGAGCACATTATGCTTGTTGACTTGGGGAGGAATGATGTCGGGAAGGTCTCAAAACCTGGTTCTGTCAAAGTTGAGAAGCTCATGAACATTGAGCGTTATTCCCATGTCATGCACATAAGTTCTACTGTCACTGGAGAGTTGCTTGATCATTTAAGTAGCTGGGATGTTCTACGAACTGCATTGCCGGTTGGGACTGTCAGCGGAGCACCAAAGGTAAAAGCCATGGAGCTGATTGATGAGCTGGAAGTGACTAGACGTGGTCCATACAGTGGCGGTTTTGGAGGAATTTCATTTTCTGGAAACATGGACATCGCCCTTGCTCTGAGAACTATTGTTTTCCCAACTAGCTTTCGATATGATACAATGTATTCATACAAGGACACAAATAAGTGGCGAGAGTGGGTTGCTCATCTCCAAGCCGGAGCTGGAATTGTGGCCGACAGTGTTCCAGCTGAGGAGCAGAGAGAGTGTGAGAACAAAGCTGCTGGTCTTGCACGGGCTATTGATCTTGCAGAGTCATCGTTTGTTGATAACTGA

Protein Analysis

584

Amino Acids

65.48

Weight (kDa)

6.24

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anth_synt_I_N PF04715 80 - 233 5.9e-28 Anthranilate synthase component I, N terminal region
Chorismate_bind PF00425 295 - 566 3.7e-79 chorismate binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000452)

Species Orthologous Gene IDs
rosa_rugosa Rorug01G0066100 Rorug01G0066100 Rorug01G0069900 Rorug01G0089700 Rorug01G0090100 Rorug01G0097600 Rorug01G0099600 Rorug01G0101900 Rorug01G0102400 Rorug01G0118300 Rorug01G0124800 Rorug01G0169500 Rorug01G0238100 Rorug01G0451600 Rorug02G0188700 Rorug02G0229300 Rorug02G0253000 Rorug02G0256200 Rorug02G0258900 Rorug02G0339200 Rorug02G0392100 Rorug02G0491500 Rorug03G0141200 Rorug03G0192500 Rorug03G0200300 Rorug03G0218600 Rorug03G0269500 Rorug03G0269700 Rorug03G0272400 Rorug03G0276400 Rorug03G0283800 Rorug03G0334100 Rorug03G0356200 Rorug04G0002200 Rorug04G0008300 Rorug04G0031200 Rorug04G0040800 Rorug04G0063000 Rorug04G0069500.1 Rorug04G0070200 Rorug04G0114400 Rorug04G0181100 Rorug04G0205700 Rorug05G0004000 Rorug05G0018000 Rorug05G0018100 Rorug05G0090500 Rorug05G0108800 Rorug05G0118900 Rorug05G0202300 Rorug05G0214200 Rorug05G0243800 Rorug05G0243900 Rorug05G0266300 Rorug05G0272500 Rorug05G0276400 Rorug05G0291500 Rorug05G0293800 Rorug05G0350400 Rorug05G0360900 Rorug05G0369500 Rorug05G0370100 Rorug05G0370500 Rorug05G0407800 Rorug05G0418900 Rorug05G0524200 Rorug05G0526800 Rorug05G0547200 Rorug06G0004100 Rorug06G0015000 Rorug06G0027300 Rorug06G0048200 Rorug06G0059100 Rorug06G0066200 Rorug06G0128100 Rorug06G0363800.1 Rorug07G0031500 Rorug07G0184700 Rorug07G0185600 Rorug07G0189600 Rorug07G0196500 Rorug07G0200700 Rorug07G0219700 Rorug07G0219900 Rorug07G0219900 Rorug07G0223000 Rorug07G0223000 Rorug07G0230800 Rorug07G0243500 Rorug07G0244700 Rorug07G0245700 Rorug07G0279800 Rorug07G0305800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 41
Acc16I TGCGCA 1 cut(s) 1216
Acc36I ACCTGC 1 cut(s) 812
AccB7I CCANNNNNTGG 2 cut(s) 605, 1487
AccII CGCG 2 cut(s) 122, 124
AciI CCGC 7 cut(s) 15, 120, 147, 352, 503, 1419, 1491
AclWI GGATC 4 cut(s) 246, 317, 455, 468
AcoI YGGCCR 2 cut(s) 82, 1653
AcsI RAATTY 4 cut(s) 205, 999, 1089, 1503
AcuI CTGAAG 1 cut(s) 717
AcvI CACGTG 1 cut(s) 1100
AcyI GRCGYC 1 cut(s) 38
AdeI CACNNNGTG 1 cut(s) 712
AfaI GTAC 1 cut(s) 356
AfeI AGCGCT 1 cut(s) 965
AfiI CCNNNNNNNGG 5 cut(s) 271, 348, 605, 1136, 1487
AflIII ACRYGT 3 cut(s) 697, 1097, 1099
AgeI ACCGGT 1 cut(s) 264
AgsI TTSAA 9 cut(s) 79, 334, 751, 828, 873, 910, 971, 1080, 1198
AjiI CACGTC 1 cut(s) 1475
AjnI CCWGG 1 cut(s) 1273
Alw21I GWGCWC 3 cut(s) 613, 1224, 1426
Alw26I GTCTC 3 cut(s) 162, 285, 1270
Alw44I GTGCAC 1 cut(s) 609
AlwI GGATC 4 cut(s) 246, 317, 455, 468
Ama87I CYCGRG 1 cut(s) 808
Aor51HI AGCGCT 1 cut(s) 965
AoxI GGCC 4 cut(s) 82, 649, 744, 1653
ApaLI GTGCAC 1 cut(s) 609
ApeKI GCWGC 4 cut(s) 93, 595, 814, 1700
ApoI RAATTY 4 cut(s) 205, 999, 1089, 1503
AsiGI ACCGGT 1 cut(s) 264
AspLEI GCGC 4 cut(s) 124, 373, 966, 1217
AspS9I GGNCC 2 cut(s) 421, 1478
AsuC2I CCSGG 1 cut(s) 327
AsuHPI GGTGA 3 cut(s) 58, 796, 1111
AsuII TTCGAA 2 cut(s) 194, 996
AvaI CYCGRG 1 cut(s) 808
AvaII GGWCC 2 cut(s) 421, 1478
BaeGI GKGCMC 1 cut(s) 613
BaeI ACNNNNGTAYC 2 cut(s) 765, 798
BamHI GGATCC 1 cut(s) 460
BbrPI CACGTG 1 cut(s) 1100
Bbv12I GWGCWC 3 cut(s) 613, 1224, 1426
BbvCI CCTCAGC 1 cut(s) 1671
BbvI GCAGC 4 cut(s) 105, 582, 801, 1687
BccI CCATC 3 cut(s) 489, 537, 749
BceAI ACGGC 3 cut(s) 2, 40, 97
BcgI CGANNNNNNTGC 4 cut(s) 704, 738, 1719, 1753
BciT130I CCWGG 1 cut(s) 1275
BciVI GTATCC 1 cut(s) 492
BclI TGATCA 2 cut(s) 676, 1363
BcnI CCSGG 1 cut(s) 327
BcoDI GTCTC 3 cut(s) 162, 285, 1270
BfaI CTAG 4 cut(s) 11, 786, 1470, 1563
BfmI CTRYAG 2 cut(s) 91, 819
BfoI RGCGCY 1 cut(s) 967
BfuAI ACCTGC 1 cut(s) 812
BfuI GTATCC 1 cut(s) 492
BglII AGATCT 1 cut(s) 1171
BisI GCNGC 5 cut(s) 15, 94, 596, 815, 1701
BlsI GCNGC 5 cut(s) 16, 95, 597, 816, 1702
Bme1390I CCNGG 2 cut(s) 327, 1275
Bme18I GGWCC 2 cut(s) 421, 1478
BmeT110I CYCGRG 1 cut(s) 808
BmgBI CACGTC 1 cut(s) 1475
BmgT120I GGNCC 2 cut(s) 421, 1478
BmiI GGNNCC 1 cut(s) 462
BmrFI CCNGG 2 cut(s) 327, 1275
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 2 cut(s) 131, 510
BmuI ACTGGG 1 cut(s) 718
BpmI CTGGAG 1 cut(s) 1371
Bpu10I CCTNAGC 1 cut(s) 1671
Bpu14I TTCGAA 2 cut(s) 194, 996
BpuMI CCSGG 1 cut(s) 327
BsaAI YACGTR 1 cut(s) 1100
BsaBI GATNNNNATC 1 cut(s) 642
BsaHI GRCGYC 1 cut(s) 38
BsaI GGTCTC 1 cut(s) 1270
BsaJI CCNNGG 2 cut(s) 809, 1440
BsaWI WCCGGW 1 cut(s) 264
Bsc4I CCNNNNNNNGG 5 cut(s) 271, 348, 605, 1136, 1487
Bse118I RCCGGY 2 cut(s) 264, 1402
Bse1I ACTGG 3 cut(s) 713, 783, 1354
Bse3DI GCAATG 3 cut(s) 50, 1217, 1397
Bse8I GATNNNNATC 1 cut(s) 642
BseBI CCWGG 1 cut(s) 1275
BseDI CCNNGG 2 cut(s) 809, 1440
BseGI GGATG 5 cut(s) 289, 500, 548, 765, 1387
BseJI GATNNNNATC 1 cut(s) 642
BseLI CCNNNNNNNGG 5 cut(s) 271, 348, 605, 1136, 1487
BseMI GCAATG 3 cut(s) 50, 1217, 1397
BseMII CTCAG 5 cut(s) 151, 158, 491, 1532, 1662
BseNI ACTGG 3 cut(s) 713, 783, 1354
BseRI GAGGAG 3 cut(s) 461, 755, 1688
BseSI GKGCMC 1 cut(s) 613
BseX3I CGGCCG 1 cut(s) 82
BseXI GCAGC 4 cut(s) 105, 582, 801, 1687
BseYI CCCAGC 3 cut(s) 932, 1136, 1377
Bsh1236I CGCG 2 cut(s) 122, 124
Bsh1285I CGRYCG 2 cut(s) 85, 1010
BshFI GGCC 4 cut(s) 84, 651, 746, 1655
BshTI ACCGGT 1 cut(s) 264
BsiEI CGRYCG 2 cut(s) 85, 1010
BsiHKAI GWGCWC 3 cut(s) 613, 1224, 1426
BsiHKCI CYCGRG 1 cut(s) 808
BsiSI CCGG 4 cut(s) 265, 326, 1403, 1638
BslFI GGGAC 2 cut(s) 1153, 1423
BslI CCNNNNNNNGG 5 cut(s) 271, 348, 605, 1136, 1487
BsmAI GTCTC 3 cut(s) 162, 285, 1270
BsmBI CGTCTC 2 cut(s) 162, 285
BsmFI GGGAC 2 cut(s) 1153, 1423
BsnI GGCC 4 cut(s) 84, 651, 746, 1655
Bso31I GGTCTC 1 cut(s) 1270
BsoBI CYCGRG 1 cut(s) 808
Bsp119I TTCGAA 2 cut(s) 194, 996
Bsp1286I GDGCHC 3 cut(s) 613, 1224, 1426
Bsp19I CCATGG 1 cut(s) 1440
BspACI CCGC 7 cut(s) 15, 120, 147, 352, 503, 1419, 1491
BspANI GGCC 4 cut(s) 84, 651, 746, 1655
BspCNI CTCAG 5 cut(s) 150, 159, 490, 1533, 1663
BspFNI CGCG 2 cut(s) 122, 124
BspHI TCATGA 1 cut(s) 1299
BspLI GGNNCC 1 cut(s) 462
BspMAI CTGCAG 2 cut(s) 95, 823
BspMI ACCTGC 1 cut(s) 812
BspPI GGATC 4 cut(s) 246, 317, 455, 468
BspT104I TTCGAA 2 cut(s) 194, 996
BspTNI GGTCTC 1 cut(s) 1270
BsrDI GCAATG 3 cut(s) 50, 1217, 1397
BsrFI RCCGGY 2 cut(s) 264, 1402
BsrI ACTGG 3 cut(s) 713, 783, 1354
BssAI RCCGGY 2 cut(s) 264, 1402
BssECI CCNNGG 2 cut(s) 809, 1440
BssNI GRCGYC 1 cut(s) 38
BssT1I CCWWGG 1 cut(s) 1440
Bst2UI CCWGG 1 cut(s) 1275
Bst6I CTCTTC 1 cut(s) 1144
BstACI GRCGYC 1 cut(s) 38
BstAPI GCANNNNNTGC 1 cut(s) 1228
BstBAI YACGTR 1 cut(s) 1100
BstBI TTCGAA 2 cut(s) 194, 996
BstC8I GCNNGC 2 cut(s) 258, 819
BstDEI CTNAG 6 cut(s) 137, 167, 477, 928, 1541, 1671
BstDSI CCRYGG 1 cut(s) 1440
BstF5I GGATG 5 cut(s) 289, 500, 548, 765, 1387
BstFNI CGCG 2 cut(s) 122, 124
BstH2I RGCGCY 1 cut(s) 967
BstHHI GCGC 4 cut(s) 124, 373, 966, 1217
BstMAI GTCTC 3 cut(s) 162, 285, 1270
BstMCI CGRYCG 2 cut(s) 85, 1010
BstMWI GCNNNNNNNGC 3 cut(s) 90, 1228, 1709
BstNI CCWGG 1 cut(s) 1275
BstNSI RCATGY 1 cut(s) 701
BstSCI CCNGG 2 cut(s) 325, 1273
BstSFI CTRYAG 2 cut(s) 91, 819
BstSLI GKGCMC 1 cut(s) 613
BstUI CGCG 2 cut(s) 122, 124
BstV1I GCAGC 4 cut(s) 105, 582, 801, 1687
BstX2I RGATCY 2 cut(s) 460, 1171
BstYI RGATCY 2 cut(s) 460, 1171
BstZI CGGCCG 1 cut(s) 82
BsuI GTATCC 1 cut(s) 492
BsuRI GGCC 4 cut(s) 84, 651, 746, 1655
BtgI CCRYGG 1 cut(s) 1440
BtgZI GCGATG 1 cut(s) 1513
BtrI CACGTC 1 cut(s) 1475
BtsCI GGATG 5 cut(s) 289, 500, 548, 765, 1387
BtsIMutI CAGTG 8 cut(s) 164, 576, 610, 706, 776, 1347, 1492, 1666
BveI ACCTGC 1 cut(s) 812
Cac8I GCNNGC 2 cut(s) 258, 819
CciI TCATGA 1 cut(s) 1299
CfoI GCGC 4 cut(s) 124, 373, 966, 1217
Cfr10I RCCGGY 2 cut(s) 264, 1402
Cfr13I GGNCC 2 cut(s) 421, 1478
CseI GACGC 1 cut(s) 302
CsiI ACCWGGT 1 cut(s) 1273
Csp6I GTAC 1 cut(s) 355
CspAI ACCGGT 1 cut(s) 264
CviQI GTAC 1 cut(s) 355
DdeI CTNAG 6 cut(s) 137, 167, 477, 928, 1541, 1671
DraIII CACNNNGTG 1 cut(s) 712
EaeI YGGCCR 2 cut(s) 82, 1653
EagI CGGCCG 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 1144
EarI CTCTTC 1 cut(s) 1144
EclXI CGGCCG 1 cut(s) 82
Eco130I CCWWGG 1 cut(s) 1440
Eco147I AGGCCT 1 cut(s) 746
Eco31I GGTCTC 1 cut(s) 1270
Eco47I GGWCC 2 cut(s) 421, 1478
Eco47III AGCGCT 1 cut(s) 965
Eco52I CGGCCG 1 cut(s) 82
Eco57I CTGAAG 1 cut(s) 717
Eco72I CACGTG 1 cut(s) 1100
Eco88I CYCGRG 1 cut(s) 808
EcoRII CCWGG 1 cut(s) 1273
EcoT14I CCWWGG 1 cut(s) 1440
ErhI CCWWGG 1 cut(s) 1440
Esp3I CGTCTC 2 cut(s) 162, 285
FaqI GGGAC 2 cut(s) 1153, 1423
FbaI TGATCA 2 cut(s) 676, 1363
Fnu4HI GCNGC 5 cut(s) 15, 94, 596, 815, 1701
FokI GGATG 5 cut(s) 296, 507, 555, 772, 1394
Fsp4HI GCNGC 5 cut(s) 15, 94, 596, 815, 1701
FspBI CTAG 4 cut(s) 11, 786, 1470, 1563
FspI TGCGCA 1 cut(s) 1216
GlaI GCGC 4 cut(s) 123, 372, 965, 1216
GluI GCNGC 5 cut(s) 15, 94, 596, 815, 1701
GsaI CCCAGC 3 cut(s) 936, 1140, 1381
GsuI CTGGAG 1 cut(s) 1371
HaeII RGCGCY 1 cut(s) 967
HaeIII GGCC 4 cut(s) 84, 651, 746, 1655
HapII CCGG 4 cut(s) 265, 326, 1403, 1638
HgaI GACGC 1 cut(s) 302
HhaI GCGC 4 cut(s) 124, 373, 966, 1217
Hin1I GRCGYC 1 cut(s) 38
Hin6I GCGC 4 cut(s) 122, 371, 964, 1215
HinP1I GCGC 4 cut(s) 122, 371, 964, 1215
HincII GTYRAC 2 cut(s) 42, 1237
HindII GTYRAC 2 cut(s) 42, 1237
HinfI GANTC 6 cut(s) 87, 338, 483, 869, 1030, 1733
HpaII CCGG 4 cut(s) 265, 326, 1403, 1638
HphI GGTGA 3 cut(s) 58, 796, 1111
Hpy166II GTNNAC 5 cut(s) 42, 60, 134, 611, 1237
Hpy188I TCNGA 8 cut(s) 140, 177, 238, 300, 480, 948, 1029, 1542
Hpy188III TCNNGA 7 cut(s) 512, 635, 786, 1085, 1258, 1300, 1515
Hpy8I GTNNAC 5 cut(s) 42, 60, 134, 611, 1237
HpyAV CCTTC 3 cut(s) 425, 757, 1255
HpyCH4IV ACGT 4 cut(s) 38, 508, 1099, 1474
HpyF10VI GCNNNNNNNGC 3 cut(s) 90, 1228, 1709
HpyF3I CTNAG 6 cut(s) 137, 167, 477, 928, 1541, 1671
HpySE526I ACGT 4 cut(s) 38, 508, 1099, 1474
Hsp92I GRCGYC 1 cut(s) 38
HspAI GCGC 4 cut(s) 122, 371, 964, 1215
Ksp22I TGATCA 2 cut(s) 676, 1363
LmnI GCTCC 9 cut(s) 29, 119, 149, 301, 368, 1421, 1444, 1640, 1675
Lsp1109I GCAGC 4 cut(s) 105, 582, 801, 1687
LweI GCATC 2 cut(s) 131, 510
MabI ACCWGGT 1 cut(s) 1273
MaeI CTAG 4 cut(s) 11, 786, 1470, 1563
MaeII ACGT 4 cut(s) 38, 508, 1099, 1474
MaeIII GTNAC 6 cut(s) 64, 409, 551, 834, 1345, 1465
MboII GAAGA 7 cut(s) 598, 623, 632, 700, 723, 1161, 1181
MflI RGATCY 2 cut(s) 460, 1171
MhlI GDGCHC 3 cut(s) 613, 1224, 1426
MlyI GAGTC 4 cut(s) 96, 332, 1039, 1742
MmeI TCCRAC 1 cut(s) 1161
MseI TTAA 8 cut(s) 209, 245, 276, 956, 1013, 1023, 1104, 1370
MslI CAYNNNNRTG 1 cut(s) 139
MspA1I CMGCKG 3 cut(s) 34, 1419, 1670
MspI CCGG 4 cut(s) 265, 326, 1403, 1638
MspR9I CCNGG 2 cut(s) 327, 1275
MvaI CCWGG 1 cut(s) 1275
MvnI CGCG 2 cut(s) 122, 124
MwoI GCNNNNNNNGC 3 cut(s) 90, 1228, 1709
NciI CCSGG 1 cut(s) 327
NcoI CCATGG 1 cut(s) 1440
NlaIV GGNNCC 1 cut(s) 462
NmeAIII GCCGAG 1 cut(s) 110
NmuCI GTSAC 3 cut(s) 64, 1345, 1465
NsbI TGCGCA 1 cut(s) 1216
NspI RCATGY 1 cut(s) 701
NspV TTCGAA 2 cut(s) 194, 996
PagI TCATGA 1 cut(s) 1299
PceI AGGCCT 1 cut(s) 746
PciI ACATGT 1 cut(s) 697
PfeI GAWTC 2 cut(s) 483, 869
PflFI GACNNNGTC 1 cut(s) 1476
PflMI CCANNNNNTGG 2 cut(s) 605, 1487
PinAI ACCGGT 1 cut(s) 264
PkrI GCNGC 5 cut(s) 16, 95, 597, 816, 1702
Ple19I CGATCG 1 cut(s) 1010
PleI GAGTC 4 cut(s) 95, 332, 1038, 1741
PmaCI CACGTG 1 cut(s) 1100
PmlI CACGTG 1 cut(s) 1100
PpsI GAGTC 4 cut(s) 95, 332, 1038, 1741
Ppu21I YACGTR 1 cut(s) 1100
PscI ACATGT 1 cut(s) 697
Psp6I CCWGG 1 cut(s) 1273
PspCI CACGTG 1 cut(s) 1100
PspFI CCCAGC 3 cut(s) 932, 1136, 1377
PspGI CCWGG 1 cut(s) 1273
PspN4I GGNNCC 1 cut(s) 462
PspPI GGNCC 2 cut(s) 421, 1478
PstI CTGCAG 2 cut(s) 95, 823
PsuI RGATCY 2 cut(s) 460, 1171
PsyI GACNNNGTC 1 cut(s) 1476
PvuI CGATCG 1 cut(s) 1010
PvuII CAGCTG 2 cut(s) 34, 1670
RsaI GTAC 1 cut(s) 356
RsaNI GTAC 1 cut(s) 355
RseI CAYNNNNRTG 1 cut(s) 139
SaqAI TTAA 8 cut(s) 209, 245, 276, 956, 1013, 1023, 1104, 1370
SatI GCNGC 5 cut(s) 15, 94, 596, 815, 1701
Sau96I GGNCC 2 cut(s) 421, 1478
SbfI CCTGCAGG 1 cut(s) 823
SchI GAGTC 4 cut(s) 96, 332, 1039, 1742
ScrFI CCNGG 2 cut(s) 327, 1275
SdaI CCTGCAGG 1 cut(s) 823
SduI GDGCHC 3 cut(s) 613, 1224, 1426
SexAI ACCWGGT 1 cut(s) 1273
SfaNI GCATC 2 cut(s) 131, 510
SfcI CTRYAG 2 cut(s) 91, 819
SfuI TTCGAA 2 cut(s) 194, 996
SinI GGWCC 2 cut(s) 421, 1478
SmiMI CAYNNNNRTG 1 cut(s) 139
Sse8387I CCTGCAGG 1 cut(s) 823
SseBI AGGCCT 1 cut(s) 746
SsiI CCGC 7 cut(s) 15, 120, 147, 352, 503, 1419, 1491
SspMI CTAG 4 cut(s) 11, 786, 1470, 1563
StuI AGGCCT 1 cut(s) 746
StyD4I CCNGG 2 cut(s) 325, 1273
StyI CCWWGG 1 cut(s) 1440
TaiI ACGT 4 cut(s) 41, 511, 1102, 1477
TaqI TCGA 5 cut(s) 186, 194, 996, 1126, 1570
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 2 cut(s) 483, 869
Tru1I TTAA 8 cut(s) 209, 245, 276, 956, 1013, 1023, 1104, 1370
Tru9I TTAA 8 cut(s) 209, 245, 276, 956, 1013, 1023, 1104, 1370
TscAI CASTG 8 cut(s) 171, 576, 610, 713, 783, 1354, 1492, 1666
TseFI GTSAC 3 cut(s) 64, 1345, 1465
TseI GCWGC 4 cut(s) 93, 595, 814, 1700
Tsp45I GTSAC 3 cut(s) 64, 1345, 1465
TspDTI ATGAA 6 cut(s) 632, 776, 1218, 1316, 1497, 1578
TspGWI ACGGA 2 cut(s) 119, 503
TspRI CASTG 8 cut(s) 171, 576, 610, 713, 783, 1354, 1492, 1666
Tth111I GACNNNGTC 1 cut(s) 1476
Van91I CCANNNNNTGG 2 cut(s) 605, 1487
VneI GTGCAC 1 cut(s) 609
VpaK11BI GGWCC 2 cut(s) 421, 1478
XapI RAATTY 4 cut(s) 205, 999, 1089, 1503
XbaI TCTAGA 1 cut(s) 785
XceI RCATGY 1 cut(s) 701
XcmI CCANNNNNNNNNTGG 1 cut(s) 1640
XspI CTAG 4 cut(s) 11, 786, 1470, 1563
ZraI GACGTC 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.