Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Band_7 | PF01145 | 67 - 229 | 1.7e-21 | SPFH domain / Band 7 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 42, 199 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 72 |
| AccI | GTMKAC | 1 cut(s) | 438 |
| AciI | CCGC | 2 cut(s) | 229, 434 |
| AclWI | GGATC | 2 cut(s) | 534, 581 |
| AfaI | GTAC | 2 cut(s) | 245, 478 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 24, 72 |
| AgsI | TTSAA | 2 cut(s) | 319, 512 |
| AjnI | CCWGG | 2 cut(s) | 178, 206 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 733, 765 |
| AluBI | AGCT | 6 cut(s) | 69, 353, 425, 647, 683, 734 |
| AluI | AGCT | 6 cut(s) | 69, 353, 425, 647, 683, 734 |
| AlwI | GGATC | 2 cut(s) | 534, 581 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 576, 704 |
| AoxI | GGCC | 2 cut(s) | 342, 373 |
| ApeKI | GCWGC | 2 cut(s) | 665, 683 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 748 |
| AspS9I | GGNCC | 2 cut(s) | 343, 373 |
| AsuHPI | GGTGA | 3 cut(s) | 349, 509, 649 |
| AsuII | TTCGAA | 1 cut(s) | 136 |
| BanI | GGYRCC | 2 cut(s) | 42, 199 |
| BbsI | GAAGAC | 1 cut(s) | 93 |
| BbvI | GCAGC | 2 cut(s) | 670, 677 |
| BccI | CCATC | 2 cut(s) | 576, 763 |
| BciT130I | CCWGG | 2 cut(s) | 180, 208 |
| BfaI | CTAG | 1 cut(s) | 387 |
| BfmI | CTRYAG | 1 cut(s) | 577 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 208 |
| BglII | AGATCT | 1 cut(s) | 32 |
| BisI | GCNGC | 2 cut(s) | 666, 684 |
| BlsI | GCNGC | 2 cut(s) | 667, 685 |
| Bme1390I | CCNGG | 2 cut(s) | 180, 208 |
| BmgT120I | GGNCC | 2 cut(s) | 343, 373 |
| BmiI | GGNNCC | 3 cut(s) | 44, 201, 414 |
| BmrFI | CCNGG | 2 cut(s) | 180, 208 |
| BmrI | ACTGGG | 2 cut(s) | 76, 475 |
| BmsI | GCATC | 1 cut(s) | 478 |
| BmuI | ACTGGG | 2 cut(s) | 76, 475 |
| BpiI | GAAGAC | 1 cut(s) | 93 |
| BpmI | CTGGAG | 3 cut(s) | 162, 285, 713 |
| Bpu14I | TTCGAA | 1 cut(s) | 136 |
| BpuEI | CTTGAG | 1 cut(s) | 386 |
| BsaAI | YACGTR | 1 cut(s) | 429 |
| BsaJI | CCNNGG | 3 cut(s) | 179, 206, 717 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 404, 434, 698, 728, 733, 763 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 24, 72 |
| Bse1I | ACTGG | 4 cut(s) | 82, 391, 481, 696 |
| Bse3DI | GCAATG | 1 cut(s) | 310 |
| BseBI | CCWGG | 2 cut(s) | 180, 208 |
| BseDI | CCNNGG | 3 cut(s) | 179, 206, 717 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 24, 72 |
| BseMI | GCAATG | 1 cut(s) | 310 |
| BseMII | CTCAG | 1 cut(s) | 485 |
| BseNI | ACTGG | 4 cut(s) | 82, 391, 481, 696 |
| BseXI | GCAGC | 2 cut(s) | 670, 677 |
| Bsh1285I | CGRYCG | 2 cut(s) | 116, 438 |
| BshFI | GGCC | 2 cut(s) | 344, 375 |
| BshNI | GGYRCC | 2 cut(s) | 42, 199 |
| BsiEI | CGRYCG | 2 cut(s) | 116, 438 |
| BslFI | GGGAC | 1 cut(s) | 196 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 24, 72 |
| BsmFI | GGGAC | 1 cut(s) | 196 |
| BsnI | GGCC | 2 cut(s) | 344, 375 |
| Bsp119I | TTCGAA | 1 cut(s) | 136 |
| Bsp143I | GATC | 4 cut(s) | 32, 113, 526, 573 |
| BspACI | CCGC | 2 cut(s) | 229, 434 |
| BspANI | GGCC | 2 cut(s) | 344, 375 |
| BspCNI | CTCAG | 1 cut(s) | 484 |
| BspLI | GGNNCC | 3 cut(s) | 44, 201, 414 |
| BspPI | GGATC | 2 cut(s) | 534, 581 |
| BspT104I | TTCGAA | 1 cut(s) | 136 |
| BspT107I | GGYRCC | 2 cut(s) | 42, 199 |
| BsrDI | GCAATG | 1 cut(s) | 310 |
| BsrI | ACTGG | 4 cut(s) | 82, 391, 481, 696 |
| BssECI | CCNNGG | 3 cut(s) | 179, 206, 717 |
| BssMI | GATC | 4 cut(s) | 32, 113, 526, 573 |
| BssT1I | CCWWGG | 1 cut(s) | 717 |
| Bst2UI | CCWGG | 2 cut(s) | 180, 208 |
| Bst4CI | ACNGT | 4 cut(s) | 122, 133, 382, 508 |
| Bst6I | CTCTTC | 1 cut(s) | 739 |
| BstBAI | YACGTR | 1 cut(s) | 429 |
| BstBI | TTCGAA | 1 cut(s) | 136 |
| BstC8I | GCNNGC | 3 cut(s) | 67, 148, 213 |
| BstDEI | CTNAG | 2 cut(s) | 471, 726 |
| BstKTI | GATC | 4 cut(s) | 35, 116, 529, 576 |
| BstMBI | GATC | 4 cut(s) | 32, 113, 526, 573 |
| BstMCI | CGRYCG | 2 cut(s) | 116, 438 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 208, 350, 431, 671, 680 |
| BstNI | CCWGG | 2 cut(s) | 180, 208 |
| BstSCI | CCNGG | 2 cut(s) | 178, 206 |
| BstSFI | CTRYAG | 1 cut(s) | 577 |
| BstSNI | TACGTA | 1 cut(s) | 429 |
| BstV1I | GCAGC | 2 cut(s) | 670, 677 |
| BstV2I | GAAGAC | 1 cut(s) | 93 |
| BstX2I | RGATCY | 2 cut(s) | 32, 573 |
| BstYI | RGATCY | 2 cut(s) | 32, 573 |
| BsuRI | GGCC | 2 cut(s) | 344, 375 |
| BtsI | GCAGTG | 1 cut(s) | 157 |
| BtsIMutI | CAGTG | 2 cut(s) | 157, 504 |
| Cac8I | GCNNGC | 3 cut(s) | 67, 148, 213 |
| CaiI | CAGNNNCTG | 2 cut(s) | 576, 704 |
| Cfr13I | GGNCC | 2 cut(s) | 343, 373 |
| Csp6I | GTAC | 2 cut(s) | 244, 477 |
| CviAII | CATG | 1 cut(s) | 632 |
| CviQI | GTAC | 2 cut(s) | 244, 477 |
| DdeI | CTNAG | 2 cut(s) | 471, 726 |
| DpnI | GATC | 4 cut(s) | 34, 115, 528, 575 |
| DpnII | GATC | 4 cut(s) | 32, 113, 526, 573 |
| Eam1104I | CTCTTC | 1 cut(s) | 739 |
| EarI | CTCTTC | 1 cut(s) | 739 |
| Eco105I | TACGTA | 1 cut(s) | 429 |
| Eco130I | CCWWGG | 1 cut(s) | 717 |
| EcoRII | CCWGG | 2 cut(s) | 178, 206 |
| EcoT14I | CCWWGG | 1 cut(s) | 717 |
| ErhI | CCWWGG | 1 cut(s) | 717 |
| FaeI | CATG | 1 cut(s) | 635 |
| FaqI | GGGAC | 1 cut(s) | 196 |
| FatI | CATG | 1 cut(s) | 631 |
| FblI | GTMKAC | 1 cut(s) | 438 |
| Fnu4HI | GCNGC | 2 cut(s) | 666, 684 |
| Fsp4HI | GCNGC | 2 cut(s) | 666, 684 |
| FspBI | CTAG | 1 cut(s) | 387 |
| GluI | GCNGC | 2 cut(s) | 666, 684 |
| GsuI | CTGGAG | 3 cut(s) | 162, 285, 713 |
| HaeIII | GGCC | 2 cut(s) | 344, 375 |
| Hin1II | CATG | 1 cut(s) | 635 |
| HincII | GTYRAC | 2 cut(s) | 396, 439 |
| HindII | GTYRAC | 2 cut(s) | 396, 439 |
| HinfI | GANTC | 2 cut(s) | 184, 695 |
| HpaI | GTTAAC | 1 cut(s) | 396 |
| HphI | GGTGA | 3 cut(s) | 349, 509, 649 |
| Hpy166II | GTNNAC | 3 cut(s) | 396, 439, 500 |
| Hpy188I | TCNGA | 3 cut(s) | 118, 474, 487 |
| Hpy188III | TCNNGA | 3 cut(s) | 127, 264, 403 |
| Hpy8I | GTNNAC | 3 cut(s) | 396, 439, 500 |
| Hpy99I | CGWCG | 3 cut(s) | 97, 100, 192 |
| HpyCH4III | ACNGT | 4 cut(s) | 122, 133, 382, 508 |
| HpyCH4IV | ACGT | 1 cut(s) | 428 |
| HpyCH4V | TGCA | 2 cut(s) | 310, 491 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 208, 350, 431, 671, 680 |
| HpyF3I | CTNAG | 2 cut(s) | 471, 726 |
| HpySE526I | ACGT | 1 cut(s) | 428 |
| Hsp92II | CATG | 1 cut(s) | 635 |
| KspAI | GTTAAC | 1 cut(s) | 396 |
| Kzo9I | GATC | 4 cut(s) | 32, 113, 526, 573 |
| LmnI | GCTCC | 1 cut(s) | 412 |
| Lsp1109I | GCAGC | 2 cut(s) | 670, 677 |
| LweI | GCATC | 1 cut(s) | 478 |
| MaeI | CTAG | 1 cut(s) | 387 |
| MaeII | ACGT | 1 cut(s) | 428 |
| MaeIII | GTNAC | 1 cut(s) | 382 |
| MalI | GATC | 4 cut(s) | 34, 115, 528, 575 |
| MboI | GATC | 4 cut(s) | 32, 113, 526, 573 |
| MboII | GAAGA | 5 cut(s) | 93, 329, 652, 703, 756 |
| MfeI | CAATTG | 1 cut(s) | 492 |
| MflI | RGATCY | 2 cut(s) | 32, 573 |
| MluCI | AATT | 4 cut(s) | 139, 279, 297, 492 |
| MlyI | GAGTC | 2 cut(s) | 178, 704 |
| MnlI | CCTC | 9 cut(s) | 56, 67, 213, 517, 548, 592, 628, 646, 740 |
| MroXI | GAANNNNTTC | 1 cut(s) | 748 |
| MseI | TTAA | 5 cut(s) | 6, 21, 225, 278, 395 |
| MspR9I | CCNGG | 2 cut(s) | 180, 208 |
| MunI | CAATTG | 1 cut(s) | 492 |
| MvaI | CCWGG | 2 cut(s) | 180, 208 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 208, 350, 431, 671, 680 |
| NdeII | GATC | 4 cut(s) | 32, 113, 526, 573 |
| NlaIII | CATG | 1 cut(s) | 635 |
| NlaIV | GGNNCC | 3 cut(s) | 44, 201, 414 |
| NspV | TTCGAA | 1 cut(s) | 136 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 101 |
| PdmI | GAANNNNTTC | 1 cut(s) | 748 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 72 |
| PkrI | GCNGC | 2 cut(s) | 667, 685 |
| Ple19I | CGATCG | 1 cut(s) | 116 |
| PleI | GAGTC | 2 cut(s) | 178, 703 |
| PpsI | GAGTC | 2 cut(s) | 178, 703 |
| Ppu21I | YACGTR | 1 cut(s) | 429 |
| Psp6I | CCWGG | 2 cut(s) | 178, 206 |
| PspGI | CCWGG | 2 cut(s) | 178, 206 |
| PspN4I | GGNNCC | 3 cut(s) | 44, 201, 414 |
| PspPI | GGNCC | 2 cut(s) | 343, 373 |
| PstNI | CAGNNNCTG | 2 cut(s) | 576, 704 |
| PsuI | RGATCY | 2 cut(s) | 32, 573 |
| PvuI | CGATCG | 1 cut(s) | 116 |
| RsaI | GTAC | 2 cut(s) | 245, 478 |
| RsaNI | GTAC | 2 cut(s) | 244, 477 |
| SalI | GTCGAC | 1 cut(s) | 437 |
| SaqAI | TTAA | 5 cut(s) | 6, 21, 225, 278, 395 |
| SatI | GCNGC | 2 cut(s) | 666, 684 |
| Sau3AI | GATC | 4 cut(s) | 32, 113, 526, 573 |
| Sau96I | GGNCC | 2 cut(s) | 343, 373 |
| SchI | GAGTC | 2 cut(s) | 178, 704 |
| ScrFI | CCNGG | 2 cut(s) | 180, 208 |
| SfaNI | GCATC | 1 cut(s) | 478 |
| SfcI | CTRYAG | 1 cut(s) | 577 |
| SfuI | TTCGAA | 1 cut(s) | 136 |
| SmlI | CTYRAG | 1 cut(s) | 401 |
| SmoI | CTYRAG | 1 cut(s) | 401 |
| SnaBI | TACGTA | 1 cut(s) | 429 |
| Sse9I | AATT | 4 cut(s) | 139, 279, 297, 492 |
| SsiI | CCGC | 2 cut(s) | 229, 434 |
| SspI | AATATT | 1 cut(s) | 272 |
| SspMI | CTAG | 1 cut(s) | 387 |
| StyD4I | CCNGG | 2 cut(s) | 178, 206 |
| StyI | CCWWGG | 1 cut(s) | 717 |
| TaaI | ACNGT | 4 cut(s) | 122, 133, 382, 508 |
| TaiI | ACGT | 1 cut(s) | 431 |
| TaqI | TCGA | 5 cut(s) | 112, 136, 156, 190, 438 |
| TasI | AATT | 4 cut(s) | 139, 279, 297, 492 |
| TatI | WGTACW | 1 cut(s) | 243 |
| Tru1I | TTAA | 5 cut(s) | 6, 21, 225, 278, 395 |
| Tru9I | TTAA | 5 cut(s) | 6, 21, 225, 278, 395 |
| TscAI | CASTG | 2 cut(s) | 157, 511 |
| TseI | GCWGC | 2 cut(s) | 665, 683 |
| TspGWI | ACGGA | 2 cut(s) | 81, 273 |
| TspRI | CASTG | 2 cut(s) | 157, 511 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 72 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 337, 367 |
| XmiI | GTMKAC | 1 cut(s) | 438 |
| XmnI | GAANNNNTTC | 1 cut(s) | 748 |
| XspI | CTAG | 1 cut(s) | 387 |