Homeodomain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Bet_v_1 | PF00407 | 1 - 155 | 2e-26 | Pathogenesis-related protein Bet v 1 family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 423 |
| AcyI | GRCGYC | 1 cut(s) | 78 |
| AfaI | GTAC | 2 cut(s) | 245, 251 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 370 |
| AgsI | TTSAA | 4 cut(s) | 61, 137, 263, 436 |
| AjiI | CACGTC | 1 cut(s) | 379 |
| AluBI | AGCT | 2 cut(s) | 50, 198 |
| AluI | AGCT | 2 cut(s) | 50, 198 |
| Alw21I | GWGCWC | 1 cut(s) | 353 |
| Alw26I | GTCTC | 1 cut(s) | 299 |
| AoxI | GGCC | 2 cut(s) | 63, 420 |
| AspS9I | GGNCC | 1 cut(s) | 420 |
| AsuHPI | GGTGA | 4 cut(s) | 22, 152, 191, 386 |
| Bbv12I | GWGCWC | 1 cut(s) | 353 |
| BccI | CCATC | 4 cut(s) | 137, 167, 323, 347 |
| BcoDI | GTCTC | 1 cut(s) | 299 |
| BfaI | CTAG | 2 cut(s) | 51, 458 |
| BglII | AGATCT | 1 cut(s) | 294 |
| BisI | GCNGC | 1 cut(s) | 423 |
| BlsI | GCNGC | 1 cut(s) | 424 |
| BmgBI | CACGTC | 1 cut(s) | 379 |
| BmgT120I | GGNCC | 1 cut(s) | 420 |
| BmiI | GGNNCC | 2 cut(s) | 157, 337 |
| BmsI | GCATC | 2 cut(s) | 259, 329 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 17, 49, 281, 313 |
| BsaHI | GRCGYC | 1 cut(s) | 78 |
| BsaJI | CCNNGG | 2 cut(s) | 175, 369 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 370 |
| Bse118I | RCCGGY | 1 cut(s) | 425 |
| BseDI | CCNNGG | 2 cut(s) | 175, 369 |
| BseGI | GGATG | 1 cut(s) | 90 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 370 |
| BseMII | CTCAG | 3 cut(s) | 15, 117, 291 |
| BshFI | GGCC | 2 cut(s) | 65, 422 |
| BsiHKAI | GWGCWC | 1 cut(s) | 353 |
| BsiSI | CCGG | 1 cut(s) | 426 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 370 |
| BsmAI | GTCTC | 1 cut(s) | 299 |
| BsnI | GGCC | 2 cut(s) | 65, 422 |
| Bsp1286I | GDGCHC | 1 cut(s) | 353 |
| Bsp1407I | TGTACA | 1 cut(s) | 243 |
| Bsp143I | GATC | 3 cut(s) | 168, 294, 384 |
| BspACI | CCGC | 1 cut(s) | 423 |
| BspANI | GGCC | 2 cut(s) | 65, 422 |
| BspCNI | CTCAG | 3 cut(s) | 16, 118, 290 |
| BspLI | GGNNCC | 2 cut(s) | 157, 337 |
| BspQI | GCTCTTC | 1 cut(s) | 387 |
| BsrFI | RCCGGY | 1 cut(s) | 425 |
| BsrGI | TGTACA | 1 cut(s) | 243 |
| BssAI | RCCGGY | 1 cut(s) | 425 |
| BssECI | CCNNGG | 2 cut(s) | 175, 369 |
| BssMI | GATC | 3 cut(s) | 168, 294, 384 |
| BssNI | GRCGYC | 1 cut(s) | 78 |
| BssT1I | CCWWGG | 1 cut(s) | 369 |
| Bst6I | CTCTTC | 1 cut(s) | 387 |
| BstACI | GRCGYC | 1 cut(s) | 78 |
| BstAUI | TGTACA | 1 cut(s) | 243 |
| BstC8I | GCNNGC | 1 cut(s) | 409 |
| BstDEI | CTNAG | 4 cut(s) | 24, 126, 277, 309 |
| BstF5I | GGATG | 1 cut(s) | 90 |
| BstKTI | GATC | 3 cut(s) | 171, 297, 387 |
| BstMAI | GTCTC | 1 cut(s) | 299 |
| BstMBI | GATC | 3 cut(s) | 168, 294, 384 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 110 |
| BstNSI | RCATGY | 1 cut(s) | 401 |
| BstX2I | RGATCY | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 294 |
| BsuRI | GGCC | 2 cut(s) | 65, 422 |
| BtrI | CACGTC | 1 cut(s) | 379 |
| BtsCI | GGATG | 1 cut(s) | 90 |
| Cac8I | GCNNGC | 1 cut(s) | 409 |
| Cfr10I | RCCGGY | 1 cut(s) | 425 |
| Cfr13I | GGNCC | 1 cut(s) | 420 |
| CseI | GACGC | 1 cut(s) | 86 |
| Csp6I | GTAC | 2 cut(s) | 244, 250 |
| CviAII | CATG | 2 cut(s) | 256, 398 |
| CviJI | RGCY | 7 cut(s) | 50, 65, 198, 336, 407, 422, 450 |
| CviKI_1 | RGCY | 7 cut(s) | 50, 65, 198, 336, 407, 422, 450 |
| CviQI | GTAC | 2 cut(s) | 244, 250 |
| DdeI | CTNAG | 4 cut(s) | 24, 126, 277, 309 |
| DpnI | GATC | 3 cut(s) | 170, 296, 386 |
| DpnII | GATC | 3 cut(s) | 168, 294, 384 |
| Eam1104I | CTCTTC | 1 cut(s) | 387 |
| EarI | CTCTTC | 1 cut(s) | 387 |
| Eco130I | CCWWGG | 1 cut(s) | 369 |
| Eco147I | AGGCCT | 1 cut(s) | 65 |
| EcoT14I | CCWWGG | 1 cut(s) | 369 |
| ErhI | CCWWGG | 1 cut(s) | 369 |
| FaeI | CATG | 2 cut(s) | 259, 401 |
| FaiI | YATR | 5 cut(s) | 18, 201, 257, 303, 399 |
| FatI | CATG | 2 cut(s) | 255, 397 |
| Fnu4HI | GCNGC | 1 cut(s) | 423 |
| FokI | GGATG | 1 cut(s) | 77 |
| Fsp4HI | GCNGC | 1 cut(s) | 423 |
| FspBI | CTAG | 2 cut(s) | 51, 458 |
| GluI | GCNGC | 1 cut(s) | 423 |
| HaeIII | GGCC | 2 cut(s) | 65, 422 |
| HapII | CCGG | 1 cut(s) | 426 |
| HgaI | GACGC | 1 cut(s) | 86 |
| Hin1I | GRCGYC | 1 cut(s) | 78 |
| Hin1II | CATG | 2 cut(s) | 259, 401 |
| HinfI | GANTC | 2 cut(s) | 20, 130 |
| HpaII | CCGG | 1 cut(s) | 426 |
| HphI | GGTGA | 4 cut(s) | 22, 152, 191, 386 |
| Hpy166II | GTNNAC | 3 cut(s) | 30, 244, 475 |
| Hpy188I | TCNGA | 3 cut(s) | 25, 280, 328 |
| Hpy188III | TCNNGA | 4 cut(s) | 134, 163, 346, 436 |
| Hpy8I | GTNNAC | 3 cut(s) | 30, 244, 475 |
| HpyAV | CCTTC | 4 cut(s) | 131, 176, 257, 464 |
| HpyCH4IV | ACGT | 1 cut(s) | 378 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 110 |
| HpyF3I | CTNAG | 4 cut(s) | 24, 126, 277, 309 |
| HpySE526I | ACGT | 1 cut(s) | 378 |
| Hsp92I | GRCGYC | 1 cut(s) | 78 |
| Hsp92II | CATG | 2 cut(s) | 259, 401 |
| Kzo9I | GATC | 3 cut(s) | 168, 294, 384 |
| LguI | GCTCTTC | 1 cut(s) | 387 |
| LmnI | GCTCC | 2 cut(s) | 109, 341 |
| LpnPI | CCDG | 5 cut(s) | 60, 224, 367, 393, 439 |
| LweI | GCATC | 2 cut(s) | 259, 329 |
| MaeI | CTAG | 2 cut(s) | 51, 458 |
| MaeII | ACGT | 1 cut(s) | 378 |
| MaeIII | GTNAC | 1 cut(s) | 374 |
| MalI | GATC | 3 cut(s) | 170, 296, 386 |
| MboI | GATC | 3 cut(s) | 168, 294, 384 |
| MboII | GAAGA | 4 cut(s) | 178, 304, 315, 404 |
| MflI | RGATCY | 1 cut(s) | 294 |
| MhlI | GDGCHC | 1 cut(s) | 353 |
| MluCI | AATT | 2 cut(s) | 222, 285 |
| MmeI | TCCRAC | 1 cut(s) | 133 |
| MnlI | CCTC | 5 cut(s) | 43, 98, 140, 185, 326 |
| MseI | TTAA | 2 cut(s) | 117, 402 |
| MspI | CCGG | 1 cut(s) | 426 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 110 |
| NdeII | GATC | 3 cut(s) | 168, 294, 384 |
| NlaIII | CATG | 2 cut(s) | 259, 401 |
| NlaIV | GGNNCC | 2 cut(s) | 157, 337 |
| NmuCI | GTSAC | 1 cut(s) | 374 |
| NspI | RCATGY | 1 cut(s) | 401 |
| PceI | AGGCCT | 1 cut(s) | 65 |
| PciSI | GCTCTTC | 1 cut(s) | 387 |
| PfeI | GAWTC | 2 cut(s) | 20, 130 |
| PkrI | GCNGC | 1 cut(s) | 424 |
| PspN4I | GGNNCC | 2 cut(s) | 157, 337 |
| PspPI | GGNCC | 1 cut(s) | 420 |
| PsuI | RGATCY | 1 cut(s) | 294 |
| RsaI | GTAC | 2 cut(s) | 245, 251 |
| RsaNI | GTAC | 2 cut(s) | 244, 250 |
| SapI | GCTCTTC | 1 cut(s) | 387 |
| SaqAI | TTAA | 2 cut(s) | 117, 402 |
| SatI | GCNGC | 1 cut(s) | 423 |
| Sau3AI | GATC | 3 cut(s) | 168, 294, 384 |
| Sau96I | GGNCC | 1 cut(s) | 420 |
| SduI | GDGCHC | 1 cut(s) | 353 |
| SfaNI | GCATC | 2 cut(s) | 259, 329 |
| Sse9I | AATT | 2 cut(s) | 222, 285 |
| SseBI | AGGCCT | 1 cut(s) | 65 |
| SsiI | CCGC | 1 cut(s) | 423 |
| SspMI | CTAG | 2 cut(s) | 51, 458 |
| StuI | AGGCCT | 1 cut(s) | 65 |
| StyI | CCWWGG | 1 cut(s) | 369 |
| TaiI | ACGT | 1 cut(s) | 381 |
| TasI | AATT | 2 cut(s) | 222, 285 |
| TatI | WGTACW | 2 cut(s) | 243, 249 |
| TauI | GCSGC | 1 cut(s) | 425 |
| TfiI | GAWTC | 2 cut(s) | 20, 130 |
| Tru1I | TTAA | 2 cut(s) | 117, 402 |
| Tru9I | TTAA | 2 cut(s) | 117, 402 |
| TseFI | GTSAC | 1 cut(s) | 374 |
| Tsp45I | GTSAC | 1 cut(s) | 374 |
| TspDTI | ATGAA | 1 cut(s) | 33 |
| TspGWI | ACGGA | 1 cut(s) | 234 |
| XceI | RCATGY | 1 cut(s) | 401 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 376 |
| XspI | CTAG | 2 cut(s) | 51, 458 |