Homeodomain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 573 |
| AccB1I | GGYRCC | 2 cut(s) | 514, 573 |
| AccI | GTMKAC | 1 cut(s) | 1837 |
| AccII | CGCG | 1 cut(s) | 1591 |
| AciI | CCGC | 4 cut(s) | 414, 880, 965, 1591 |
| AclWI | GGATC | 1 cut(s) | 448 |
| AcsI | RAATTY | 3 cut(s) | 946, 1738, 1790 |
| AcuI | CTGAAG | 2 cut(s) | 738, 1356 |
| AcvI | CACGTG | 1 cut(s) | 197 |
| AdeI | CACNNNGTG | 1 cut(s) | 349 |
| AfaI | GTAC | 4 cut(s) | 569, 575, 650, 703 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 886 |
| AflII | CTTAAG | 1 cut(s) | 188 |
| AflIII | ACRYGT | 4 cut(s) | 22, 194, 196, 1809 |
| AgeI | ACCGGT | 1 cut(s) | 570 |
| AhlI | ACTAGT | 2 cut(s) | 704, 871 |
| AjnI | CCWGG | 2 cut(s) | 738, 814 |
| AleI | CACNNNNGTG | 1 cut(s) | 784 |
| AluBI | AGCT | 8 cut(s) | 56, 60, 119, 239, 854, 1005, 1439, 1526 |
| AluI | AGCT | 8 cut(s) | 56, 60, 119, 239, 854, 1005, 1439, 1526 |
| Alw21I | GWGCWC | 1 cut(s) | 1007 |
| AlwI | GGATC | 1 cut(s) | 448 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 74, 242 |
| AoxI | GGCC | 3 cut(s) | 519, 657, 726 |
| ApeKI | GCWGC | 9 cut(s) | 236, 239, 323, 428, 530, 768, 962, 1175, 1439 |
| ApoI | RAATTY | 3 cut(s) | 946, 1738, 1790 |
| AsiGI | ACCGGT | 1 cut(s) | 570 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 751 |
| Asp718I | GGTACC | 1 cut(s) | 573 |
| AspLEI | GCGC | 1 cut(s) | 1783 |
| AsuC2I | CCSGG | 1 cut(s) | 1455 |
| AsuHPI | GGTGA | 2 cut(s) | 21, 1370 |
| AsuII | TTCGAA | 1 cut(s) | 828 |
| AsuNHI | GCTAGC | 1 cut(s) | 56 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1069, 1102 |
| BanI | GGYRCC | 2 cut(s) | 514, 573 |
| BanII | GRGCYC | 1 cut(s) | 1007 |
| BauI | CACGAG | 1 cut(s) | 1208 |
| BbrPI | CACGTG | 1 cut(s) | 197 |
| BbsI | GAAGAC | 2 cut(s) | 387, 754 |
| Bbv12I | GWGCWC | 1 cut(s) | 1007 |
| BbvI | GCAGC | 9 cut(s) | 226, 248, 335, 415, 517, 780, 974, 1162, 1426 |
| BccI | CCATC | 5 cut(s) | 113, 364, 1288, 1630, 1675 |
| BceAI | ACGGC | 2 cut(s) | 741, 1834 |
| BciT130I | CCWGG | 2 cut(s) | 740, 816 |
| BclI | TGATCA | 4 cut(s) | 121, 930, 1147, 1468 |
| BcnI | CCSGG | 1 cut(s) | 1455 |
| BcuI | ACTAGT | 2 cut(s) | 704, 871 |
| BfmI | CTRYAG | 3 cut(s) | 93, 392, 1665 |
| BfrI | CTTAAG | 1 cut(s) | 188 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 527 |
| BisI | GCNGC | 9 cut(s) | 237, 240, 324, 429, 531, 769, 963, 1176, 1440 |
| BlsI | GCNGC | 9 cut(s) | 238, 241, 325, 430, 532, 770, 964, 1177, 1441 |
| Bme1390I | CCNGG | 3 cut(s) | 740, 816, 1455 |
| BmiI | GGNNCC | 3 cut(s) | 516, 575, 862 |
| BmrFI | CCNGG | 3 cut(s) | 740, 816, 1455 |
| BmrI | ACTGGG | 1 cut(s) | 84 |
| BmsI | GCATC | 5 cut(s) | 582, 642, 949, 1081, 1243 |
| BmtI | GCTAGC | 1 cut(s) | 60 |
| BmuI | ACTGGG | 1 cut(s) | 84 |
| BoxI | GACNNNNGTC | 1 cut(s) | 148 |
| BpiI | GAAGAC | 2 cut(s) | 387, 754 |
| BpmI | CTGGAG | 1 cut(s) | 617 |
| Bpu14I | TTCGAA | 1 cut(s) | 828 |
| BpuEI | CTTGAG | 3 cut(s) | 919, 1305, 1816 |
| BpuMI | CCSGG | 1 cut(s) | 1455 |
| BsaAI | YACGTR | 2 cut(s) | 197, 701 |
| BsaJI | CCNNGG | 2 cut(s) | 814, 1850 |
| BsaWI | WCCGGW | 1 cut(s) | 570 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 886 |
| Bse118I | RCCGGY | 2 cut(s) | 517, 570 |
| Bse1I | ACTGG | 3 cut(s) | 79, 363, 1480 |
| Bse3DI | GCAATG | 4 cut(s) | 423, 482, 999, 1566 |
| BseBI | CCWGG | 2 cut(s) | 740, 816 |
| BseDI | CCNNGG | 2 cut(s) | 814, 1850 |
| BseGI | GGATG | 3 cut(s) | 105, 1380, 1578 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 886 |
| BseMI | GCAATG | 4 cut(s) | 423, 482, 999, 1566 |
| BseMII | CTCAG | 2 cut(s) | 1005, 1449 |
| BseNI | ACTGG | 3 cut(s) | 79, 363, 1480 |
| BseXI | GCAGC | 9 cut(s) | 226, 248, 335, 415, 517, 780, 974, 1162, 1426 |
| BsgI | GTGCAG | 1 cut(s) | 201 |
| Bsh1236I | CGCG | 1 cut(s) | 1591 |
| Bsh1285I | CGRYCG | 1 cut(s) | 610 |
| BshFI | GGCC | 3 cut(s) | 521, 659, 728 |
| BshNI | GGYRCC | 2 cut(s) | 514, 573 |
| BshTI | ACCGGT | 1 cut(s) | 570 |
| BsiEI | CGRYCG | 1 cut(s) | 610 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1007 |
| BsiSI | CCGG | 3 cut(s) | 518, 571, 1454 |
| BslFI | GGGAC | 1 cut(s) | 1748 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 886 |
| BsmFI | GGGAC | 1 cut(s) | 1748 |
| BsmI | GAATGC | 1 cut(s) | 836 |
| BsnI | GGCC | 3 cut(s) | 521, 659, 728 |
| Bsp119I | TTCGAA | 1 cut(s) | 828 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1007 |
| Bsp143I | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| BspACI | CCGC | 4 cut(s) | 414, 880, 965, 1591 |
| BspANI | GGCC | 3 cut(s) | 521, 659, 728 |
| BspCNI | CTCAG | 2 cut(s) | 1006, 1448 |
| BspFNI | CGCG | 1 cut(s) | 1591 |
| BspLI | GGNNCC | 3 cut(s) | 516, 575, 862 |
| BspMAI | CTGCAG | 2 cut(s) | 97, 396 |
| BspOI | GCTAGC | 1 cut(s) | 60 |
| BspPI | GGATC | 1 cut(s) | 448 |
| BspQI | GCTCTTC | 2 cut(s) | 1230, 1332 |
| BspT104I | TTCGAA | 1 cut(s) | 828 |
| BspT107I | GGYRCC | 2 cut(s) | 514, 573 |
| BspTI | CTTAAG | 1 cut(s) | 188 |
| BsrDI | GCAATG | 4 cut(s) | 423, 482, 999, 1566 |
| BsrFI | RCCGGY | 2 cut(s) | 517, 570 |
| BsrI | ACTGG | 3 cut(s) | 79, 363, 1480 |
| BssAI | RCCGGY | 2 cut(s) | 517, 570 |
| BssECI | CCNNGG | 2 cut(s) | 814, 1850 |
| BssMI | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| BssSI | CACGAG | 1 cut(s) | 1208 |
| Bst2BI | CACGAG | 1 cut(s) | 1208 |
| Bst2UI | CCWGG | 2 cut(s) | 740, 816 |
| Bst4CI | ACNGT | 5 cut(s) | 310, 546, 578, 666, 1426 |
| Bst6I | CTCTTC | 5 cut(s) | 1230, 1332, 1555, 1661, 1822 |
| BstAFI | CTTAAG | 1 cut(s) | 188 |
| BstBAI | YACGTR | 2 cut(s) | 197, 701 |
| BstBI | TTCGAA | 1 cut(s) | 828 |
| BstC8I | GCNNGC | 5 cut(s) | 58, 282, 286, 1400, 1451 |
| BstDEI | CTNAG | 3 cut(s) | 385, 1014, 1435 |
| BstDSI | CCRYGG | 1 cut(s) | 1850 |
| BstF5I | GGATG | 3 cut(s) | 105, 1380, 1578 |
| BstFNI | CGCG | 1 cut(s) | 1591 |
| BstHHI | GCGC | 1 cut(s) | 1783 |
| BstKTI | GATC | 6 cut(s) | 124, 443, 933, 1150, 1272, 1471 |
| BstMBI | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| BstMCI | CGRYCG | 1 cut(s) | 610 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 101, 434, 527, 860, 1184, 1778 |
| BstNI | CCWGG | 2 cut(s) | 740, 816 |
| BstNSI | RCATGY | 6 cut(s) | 26, 561, 1402, 1453, 1813, 1864 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 148 |
| BstSCI | CCNGG | 3 cut(s) | 738, 814, 1453 |
| BstSFI | CTRYAG | 3 cut(s) | 93, 392, 1665 |
| BstUI | CGCG | 1 cut(s) | 1591 |
| BstV1I | GCAGC | 9 cut(s) | 226, 248, 335, 415, 517, 780, 974, 1162, 1426 |
| BstV2I | GAAGAC | 2 cut(s) | 387, 754 |
| BstX2I | RGATCY | 1 cut(s) | 440 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 786 |
| BstYI | RGATCY | 1 cut(s) | 440 |
| BsuRI | GGCC | 3 cut(s) | 521, 659, 728 |
| BtgI | CCRYGG | 1 cut(s) | 1850 |
| BtgZI | GCGATG | 1 cut(s) | 85 |
| BtsCI | GGATG | 3 cut(s) | 105, 1380, 1578 |
| BtsI | GCAGTG | 3 cut(s) | 389, 1383, 1692 |
| BtsIMutI | CAGTG | 3 cut(s) | 389, 1383, 1692 |
| Cac8I | GCNNGC | 5 cut(s) | 58, 282, 286, 1400, 1451 |
| CaiI | CAGNNNCTG | 2 cut(s) | 74, 242 |
| CfoI | GCGC | 1 cut(s) | 1783 |
| Cfr10I | RCCGGY | 2 cut(s) | 517, 570 |
| CseI | GACGC | 1 cut(s) | 1659 |
| Csp6I | GTAC | 4 cut(s) | 568, 574, 649, 702 |
| CspAI | ACCGGT | 1 cut(s) | 570 |
| CviQI | GTAC | 4 cut(s) | 568, 574, 649, 702 |
| DdeI | CTNAG | 3 cut(s) | 385, 1014, 1435 |
| DpnI | GATC | 6 cut(s) | 123, 442, 932, 1149, 1271, 1470 |
| DpnII | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| DraI | TTTAAA | 1 cut(s) | 868 |
| DraIII | CACNNNGTG | 1 cut(s) | 349 |
| Eam1104I | CTCTTC | 5 cut(s) | 1230, 1332, 1555, 1661, 1822 |
| EarI | CTCTTC | 5 cut(s) | 1230, 1332, 1555, 1661, 1822 |
| Ecl136II | GAGCTC | 1 cut(s) | 1005 |
| Eco24I | GRGCYC | 1 cut(s) | 1007 |
| Eco53kI | GAGCTC | 1 cut(s) | 1005 |
| Eco57I | CTGAAG | 2 cut(s) | 738, 1356 |
| Eco72I | CACGTG | 1 cut(s) | 197 |
| EcoICRI | GAGCTC | 1 cut(s) | 1005 |
| EcoRII | CCWGG | 2 cut(s) | 738, 814 |
| EcoT22I | ATGCAT | 2 cut(s) | 1236, 1400 |
| EcoT38I | GRGCYC | 1 cut(s) | 1007 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 171, 203 |
| FaqI | GGGAC | 1 cut(s) | 1748 |
| FauNDI | CATATG | 3 cut(s) | 1138, 1170, 1344 |
| FbaI | TGATCA | 4 cut(s) | 121, 930, 1147, 1468 |
| FblI | GTMKAC | 1 cut(s) | 1837 |
| Fnu4HI | GCNGC | 9 cut(s) | 237, 240, 324, 429, 531, 769, 963, 1176, 1440 |
| FokI | GGATG | 3 cut(s) | 92, 1387, 1565 |
| FriOI | GRGCYC | 1 cut(s) | 1007 |
| Fsp4HI | GCNGC | 9 cut(s) | 237, 240, 324, 429, 531, 769, 963, 1176, 1440 |
| GlaI | GCGC | 1 cut(s) | 1782 |
| GluI | GCNGC | 9 cut(s) | 237, 240, 324, 429, 531, 769, 963, 1176, 1440 |
| GsuI | CTGGAG | 1 cut(s) | 617 |
| HaeIII | GGCC | 3 cut(s) | 521, 659, 728 |
| HapII | CCGG | 3 cut(s) | 518, 571, 1454 |
| HgaI | GACGC | 1 cut(s) | 1659 |
| HhaI | GCGC | 1 cut(s) | 1783 |
| Hin6I | GCGC | 1 cut(s) | 1781 |
| HinP1I | GCGC | 1 cut(s) | 1781 |
| HinfI | GANTC | 7 cut(s) | 40, 65, 182, 795, 1204, 1644, 1721 |
| HpaII | CCGG | 3 cut(s) | 518, 571, 1454 |
| HphI | GGTGA | 2 cut(s) | 21, 1370 |
| Hpy166II | GTNNAC | 5 cut(s) | 710, 779, 789, 877, 1838 |
| Hpy188I | TCNGA | 3 cut(s) | 550, 1613, 1807 |
| Hpy8I | GTNNAC | 5 cut(s) | 710, 779, 789, 877, 1838 |
| Hpy99I | CGWCG | 1 cut(s) | 1675 |
| HpyCH4III | ACNGT | 5 cut(s) | 310, 546, 578, 666, 1426 |
| HpyCH4IV | ACGT | 5 cut(s) | 196, 318, 399, 700, 918 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 101, 434, 527, 860, 1184, 1778 |
| HpyF3I | CTNAG | 3 cut(s) | 385, 1014, 1435 |
| HpySE526I | ACGT | 5 cut(s) | 196, 318, 399, 700, 918 |
| HspAI | GCGC | 1 cut(s) | 1781 |
| KpnI | GGTACC | 1 cut(s) | 577 |
| Ksp22I | TGATCA | 4 cut(s) | 121, 930, 1147, 1468 |
| Kzo9I | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| LguI | GCTCTTC | 2 cut(s) | 1230, 1332 |
| LmnI | GCTCC | 2 cut(s) | 267, 860 |
| Lsp1109I | GCAGC | 9 cut(s) | 226, 248, 335, 415, 517, 780, 974, 1162, 1426 |
| LweI | GCATC | 5 cut(s) | 582, 642, 949, 1081, 1243 |
| MaeII | ACGT | 5 cut(s) | 196, 318, 399, 700, 918 |
| MaeIII | GTNAC | 4 cut(s) | 560, 1076, 1132, 1154 |
| MalI | GATC | 6 cut(s) | 123, 442, 932, 1149, 1271, 1470 |
| MboI | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| MfeI | CAATTG | 3 cut(s) | 640, 1199, 1767 |
| MflI | RGATCY | 1 cut(s) | 440 |
| MhlI | GDGCHC | 1 cut(s) | 1007 |
| MlyI | GAGTC | 2 cut(s) | 789, 1638 |
| MmeI | TCCRAC | 1 cut(s) | 1830 |
| Mph1103I | ATGCAT | 2 cut(s) | 1236, 1400 |
| MroXI | GAANNNNTTC | 1 cut(s) | 751 |
| MseI | TTAA | 4 cut(s) | 47, 189, 867, 1352 |
| MslI | CAYNNNNRTG | 2 cut(s) | 784, 1292 |
| MspA1I | CMGCKG | 4 cut(s) | 119, 239, 965, 1439 |
| MspCI | CTTAAG | 1 cut(s) | 188 |
| MspI | CCGG | 3 cut(s) | 518, 571, 1454 |
| MspR9I | CCNGG | 3 cut(s) | 740, 816, 1455 |
| MunI | CAATTG | 3 cut(s) | 640, 1199, 1767 |
| Mva1269I | GAATGC | 1 cut(s) | 836 |
| MvaI | CCWGG | 2 cut(s) | 740, 816 |
| MvnI | CGCG | 1 cut(s) | 1591 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 101, 434, 527, 860, 1184, 1778 |
| NciI | CCSGG | 1 cut(s) | 1455 |
| NdeI | CATATG | 3 cut(s) | 1138, 1170, 1344 |
| NdeII | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| NheI | GCTAGC | 1 cut(s) | 56 |
| NlaIV | GGNNCC | 3 cut(s) | 516, 575, 862 |
| NmuCI | GTSAC | 2 cut(s) | 1076, 1132 |
| NsiI | ATGCAT | 2 cut(s) | 1236, 1400 |
| NspI | RCATGY | 6 cut(s) | 26, 561, 1402, 1453, 1813, 1864 |
| NspV | TTCGAA | 1 cut(s) | 828 |
| OliI | CACNNNNGTG | 1 cut(s) | 784 |
| PaeI | GCATGC | 2 cut(s) | 1402, 1453 |
| PciI | ACATGT | 2 cut(s) | 22, 1809 |
| PciSI | GCTCTTC | 2 cut(s) | 1230, 1332 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1215 |
| PctI | GAATGC | 1 cut(s) | 836 |
| PdmI | GAANNNNTTC | 1 cut(s) | 751 |
| PfeI | GAWTC | 5 cut(s) | 40, 65, 182, 1204, 1721 |
| PflFI | GACNNNGTC | 1 cut(s) | 452 |
| PinAI | ACCGGT | 1 cut(s) | 570 |
| PkrI | GCNGC | 9 cut(s) | 238, 241, 325, 430, 532, 770, 964, 1177, 1441 |
| PleI | GAGTC | 2 cut(s) | 789, 1638 |
| PmaCI | CACGTG | 1 cut(s) | 197 |
| PmlI | CACGTG | 1 cut(s) | 197 |
| PpsI | GAGTC | 2 cut(s) | 789, 1638 |
| Ppu21I | YACGTR | 2 cut(s) | 197, 701 |
| PscI | ACATGT | 2 cut(s) | 22, 1809 |
| PshAI | GACNNNNGTC | 1 cut(s) | 148 |
| Psp124BI | GAGCTC | 1 cut(s) | 1007 |
| Psp6I | CCWGG | 2 cut(s) | 738, 814 |
| PspCI | CACGTG | 1 cut(s) | 197 |
| PspGI | CCWGG | 2 cut(s) | 738, 814 |
| PspN4I | GGNNCC | 3 cut(s) | 516, 575, 862 |
| PstI | CTGCAG | 2 cut(s) | 97, 396 |
| PstNI | CAGNNNCTG | 2 cut(s) | 74, 242 |
| PsuI | RGATCY | 1 cut(s) | 440 |
| PsyI | GACNNNGTC | 1 cut(s) | 452 |
| PvuII | CAGCTG | 3 cut(s) | 119, 239, 1439 |
| RsaI | GTAC | 4 cut(s) | 569, 575, 650, 703 |
| RsaNI | GTAC | 4 cut(s) | 568, 574, 649, 702 |
| RseI | CAYNNNNRTG | 2 cut(s) | 784, 1292 |
| SacI | GAGCTC | 1 cut(s) | 1007 |
| SapI | GCTCTTC | 2 cut(s) | 1230, 1332 |
| SaqAI | TTAA | 4 cut(s) | 47, 189, 867, 1352 |
| SatI | GCNGC | 9 cut(s) | 237, 240, 324, 429, 531, 769, 963, 1176, 1440 |
| Sau3AI | GATC | 6 cut(s) | 121, 440, 930, 1147, 1269, 1468 |
| SchI | GAGTC | 2 cut(s) | 789, 1638 |
| ScrFI | CCNGG | 3 cut(s) | 740, 816, 1455 |
| SduI | GDGCHC | 1 cut(s) | 1007 |
| SfaNI | GCATC | 5 cut(s) | 582, 642, 949, 1081, 1243 |
| SfcI | CTRYAG | 3 cut(s) | 93, 392, 1665 |
| SfuI | TTCGAA | 1 cut(s) | 828 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 784, 1292 |
| SmlI | CTYRAG | 4 cut(s) | 188, 898, 1320, 1831 |
| SmoI | CTYRAG | 4 cut(s) | 188, 898, 1320, 1831 |
| SpeI | ACTAGT | 2 cut(s) | 704, 871 |
| SphI | GCATGC | 2 cut(s) | 1402, 1453 |
| SsiI | CCGC | 4 cut(s) | 414, 880, 965, 1591 |
| SstI | GAGCTC | 1 cut(s) | 1007 |
| StyD4I | CCNGG | 3 cut(s) | 738, 814, 1453 |
| TaaI | ACNGT | 5 cut(s) | 310, 546, 578, 666, 1426 |
| TaiI | ACGT | 5 cut(s) | 199, 321, 402, 703, 921 |
| TaqI | TCGA | 6 cut(s) | 745, 828, 1045, 1237, 1290, 1673 |
| TaqII | GACCGA | 1 cut(s) | 624 |
| TfiI | GAWTC | 5 cut(s) | 40, 65, 182, 1204, 1721 |
| Tru1I | TTAA | 4 cut(s) | 47, 189, 867, 1352 |
| Tru9I | TTAA | 4 cut(s) | 47, 189, 867, 1352 |
| TscAI | CASTG | 3 cut(s) | 396, 1390, 1699 |
| TseFI | GTSAC | 2 cut(s) | 1076, 1132 |
| TseI | GCWGC | 9 cut(s) | 236, 239, 323, 428, 530, 768, 962, 1175, 1439 |
| Tsp45I | GTSAC | 2 cut(s) | 1076, 1132 |
| TspDTI | ATGAA | 9 cut(s) | 318, 1050, 1119, 1155, 1383, 1391, 1567, 1648, 1802 |
| TspRI | CASTG | 3 cut(s) | 396, 1390, 1699 |
| Tth111I | GACNNNGTC | 1 cut(s) | 452 |
| Vha464I | CTTAAG | 1 cut(s) | 188 |
| XapI | RAATTY | 3 cut(s) | 946, 1738, 1790 |
| XbaI | TCTAGA | 3 cut(s) | 293, 445, 1510 |
| XceI | RCATGY | 6 cut(s) | 26, 561, 1402, 1453, 1813, 1864 |
| XmiI | GTMKAC | 1 cut(s) | 1837 |
| XmnI | GAANNNNTTC | 1 cut(s) | 751 |
| Zsp2I | ATGCAT | 2 cut(s) | 1236, 1400 |