Rorug05G0407800

acyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
56225401 .. 56230811
5411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0407800.1

Sequence Viewer

Length: 561 bp
ATGGCCTCCTCCAATGACAAAGATTCACCTTACAAGAATCCGGGTCTCCAGGCCGTCCCAGATGAAGAAACCAAGGGCTACATCATGCAACAAACTATGTTTCGAATTAAGGACCCCAAAGTCAGTCTTGATTTTTACTCTCGTGTCTTGGGCATGTCGCTACTTAAGAGGCTGGACTTTCCGGAAATGAAGTTTAGTTTGTACTTTCTGGGCTATGCGGATGCTGCCTCAGCTCCAACTAACCCAGTTGATAGAACTGTTTGGACCTTTGGTCAGAAAGCTACAATTGAATTAACACATAACTGGGGTACTGAAAGTGATCCAGAATTCAAAGGATACCACAATGGTAATTCAGAACCTCGTGGCTTTGGACACATTGGCATCACCGTTGATGACACAAACAAGGCATGCGAGAGGTTTGAACGTCTGGGGGTTGAATTTGTGAAAAGGCCGGACGATGGAAAGATGAAAGGGATAGCATTCATTAAGGATCCAGATGGTTACTGGATTGAGATCTTTGACCTTCAAACTATAGGAAAAGTCACTCTGGGTGCTTCTTGA

Protein Analysis

186

Amino Acids

20.96

Weight (kDa)

5.43

Isoelectric Point (pI)

38.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 30 - 172 2.2e-25 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Glyoxalase_4 PF13669 31 - 154 8.8e-08 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000452)

Species Orthologous Gene IDs
rosa_rugosa Rorug01G0066100 Rorug01G0066100 Rorug01G0069900 Rorug01G0089700 Rorug01G0090100 Rorug01G0097600 Rorug01G0099600 Rorug01G0101900 Rorug01G0102400 Rorug01G0118300 Rorug01G0124800 Rorug01G0169500 Rorug01G0238100 Rorug01G0451600 Rorug02G0188700 Rorug02G0229300 Rorug02G0253000 Rorug02G0256200 Rorug02G0258900 Rorug02G0339200 Rorug02G0392100 Rorug02G0491500 Rorug03G0141200 Rorug03G0192500 Rorug03G0200300 Rorug03G0218600 Rorug03G0269500 Rorug03G0269700 Rorug03G0272400 Rorug03G0276400 Rorug03G0283800 Rorug03G0334100 Rorug03G0356200 Rorug04G0002200 Rorug04G0008300 Rorug04G0031200 Rorug04G0040800 Rorug04G0063000 Rorug04G0069500.1 Rorug04G0070200 Rorug04G0114400 Rorug04G0181100 Rorug04G0205700 Rorug05G0004000 Rorug05G0018000 Rorug05G0018100 Rorug05G0090500 Rorug05G0108800 Rorug05G0118900 Rorug05G0202300 Rorug05G0214200 Rorug05G0243800 Rorug05G0243900 Rorug05G0266300 Rorug05G0272500 Rorug05G0276400 Rorug05G0291500 Rorug05G0293800 Rorug05G0350400 Rorug05G0360900 Rorug05G0369500 Rorug05G0370100 Rorug05G0370500 Rorug05G0407800 Rorug05G0418900 Rorug05G0524200 Rorug05G0526800 Rorug05G0547200 Rorug06G0004100 Rorug06G0015000 Rorug06G0027300 Rorug06G0048200 Rorug06G0059100 Rorug06G0066200 Rorug06G0128100 Rorug06G0363800.1 Rorug07G0031500 Rorug07G0184700 Rorug07G0185600 Rorug07G0189600 Rorug07G0196500 Rorug07G0200700 Rorug07G0219700 Rorug07G0219900 Rorug07G0219900 Rorug07G0223000 Rorug07G0223000 Rorug07G0230800 Rorug07G0243500 Rorug07G0244700 Rorug07G0245700 Rorug07G0279800 Rorug07G0305800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 119
AccIII TCCGGA 1 cut(s) 181
AciI CCGC 1 cut(s) 218
AclWI GGATC 3 cut(s) 314, 485, 498
AcsI RAATTY 2 cut(s) 326, 437
AfaI GTAC 2 cut(s) 203, 310
AfiI CCNNNNNNNGG 1 cut(s) 458
AflII CTTAAG 1 cut(s) 164
AgsI TTSAA 5 cut(s) 290, 331, 422, 437, 527
AhdI GACNNNNNGTC 1 cut(s) 270
AjnI CCWGG 1 cut(s) 48
AluBI AGCT 2 cut(s) 233, 281
AluI AGCT 2 cut(s) 233, 281
Alw26I GTCTC 1 cut(s) 50
AlwI GGATC 3 cut(s) 314, 485, 498
Aor13HI TCCGGA 1 cut(s) 181
AoxI GGCC 3 cut(s) 3, 51, 449
ApeKI GCWGC 1 cut(s) 224
ApoI RAATTY 2 cut(s) 326, 437
AspS9I GGNCC 2 cut(s) 112, 264
AsuC2I CCSGG 1 cut(s) 42
AsuHPI GGTGA 2 cut(s) 18, 376
AsuII TTCGAA 1 cut(s) 103
AvaII GGWCC 2 cut(s) 112, 264
BamHI GGATCC 1 cut(s) 490
BauI CACGAG 2 cut(s) 141, 360
BbvCI CCTCAGC 1 cut(s) 229
BbvI GCAGC 1 cut(s) 211
BccI CCATC 2 cut(s) 452, 491
BceAI ACGGC 1 cut(s) 38
BciT130I CCWGG 1 cut(s) 50
BciVI GTATCC 1 cut(s) 329
BcnI CCSGG 1 cut(s) 42
BcoDI GTCTC 1 cut(s) 50
BfmI CTRYAG 1 cut(s) 531
BfrI CTTAAG 1 cut(s) 164
BfuI GTATCC 1 cut(s) 329
BglII AGATCT 1 cut(s) 513
BisI GCNGC 1 cut(s) 225
BlsI GCNGC 1 cut(s) 226
Bme1390I CCNGG 2 cut(s) 42, 50
Bme18I GGWCC 2 cut(s) 112, 264
BmeRI GACNNNNNGTC 1 cut(s) 270
BmgT120I GGNCC 2 cut(s) 112, 264
BmiI GGNNCC 2 cut(s) 114, 492
BmrFI CCNGG 2 cut(s) 42, 50
BmrI ACTGGG 2 cut(s) 239, 313
BmsI GCATC 2 cut(s) 211, 390
BmuI ACTGGG 2 cut(s) 239, 313
BpmI CTGGAG 1 cut(s) 32
Bpu10I CCTNAGC 1 cut(s) 229
Bpu14I TTCGAA 1 cut(s) 103
BpuMI CCSGG 1 cut(s) 42
BsaBI GATNNNNATC 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 50
BsaJI CCNNGG 1 cut(s) 72
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 1 cut(s) 458
Bse1I ACTGG 3 cut(s) 245, 308, 509
Bse8I GATNNNNATC 1 cut(s) 512
BseAI TCCGGA 1 cut(s) 181
BseBI CCWGG 1 cut(s) 50
BseDI CCNNGG 1 cut(s) 72
BseGI GGATG 1 cut(s) 226
BseJI GATNNNNATC 1 cut(s) 512
BseLI CCNNNNNNNGG 1 cut(s) 458
BseMII CTCAG 1 cut(s) 243
BseNI ACTGG 3 cut(s) 245, 308, 509
BseXI GCAGC 1 cut(s) 211
BshFI GGCC 3 cut(s) 5, 53, 451
BsiSI CCGG 3 cut(s) 41, 182, 452
BslFI GGGAC 1 cut(s) 41
BslI CCNNNNNNNGG 1 cut(s) 458
BsmAI GTCTC 1 cut(s) 50
BsmFI GGGAC 1 cut(s) 41
BsmI GAATGC 1 cut(s) 479
BsnI GGCC 3 cut(s) 5, 53, 451
Bso31I GGTCTC 1 cut(s) 50
Bsp119I TTCGAA 1 cut(s) 103
Bsp13I TCCGGA 1 cut(s) 181
Bsp143I GATC 3 cut(s) 319, 490, 513
BspACI CCGC 1 cut(s) 218
BspANI GGCC 3 cut(s) 5, 53, 451
BspCNI CTCAG 1 cut(s) 242
BspEI TCCGGA 1 cut(s) 181
BspLI GGNNCC 2 cut(s) 114, 492
BspPI GGATC 3 cut(s) 314, 485, 498
BspT104I TTCGAA 1 cut(s) 103
BspTI CTTAAG 1 cut(s) 164
BspTNI GGTCTC 1 cut(s) 50
BsrI ACTGG 3 cut(s) 245, 308, 509
BssECI CCNNGG 1 cut(s) 72
BssMI GATC 3 cut(s) 319, 490, 513
BssSI CACGAG 2 cut(s) 141, 360
BssT1I CCWWGG 1 cut(s) 72
Bst2BI CACGAG 2 cut(s) 141, 360
Bst2UI CCWGG 1 cut(s) 50
Bst4CI ACNGT 2 cut(s) 259, 388
BstAFI CTTAAG 1 cut(s) 164
BstBI TTCGAA 1 cut(s) 103
BstC8I GCNNGC 1 cut(s) 409
BstDEI CTNAG 1 cut(s) 229
BstF5I GGATG 1 cut(s) 226
BstKTI GATC 3 cut(s) 322, 493, 516
BstMAI GTCTC 1 cut(s) 50
BstMBI GATC 3 cut(s) 319, 490, 513
BstMWI GCNNNNNNNGC 2 cut(s) 224, 230
BstNI CCWGG 1 cut(s) 50
BstNSI RCATGY 2 cut(s) 157, 411
BstSCI CCNGG 2 cut(s) 40, 48
BstSFI CTRYAG 1 cut(s) 531
BstV1I GCAGC 1 cut(s) 211
BstX2I RGATCY 2 cut(s) 490, 513
BstYI RGATCY 2 cut(s) 490, 513
BsuI GTATCC 1 cut(s) 329
BsuRI GGCC 3 cut(s) 5, 53, 451
BtsCI GGATG 1 cut(s) 226
Cac8I GCNNGC 1 cut(s) 409
Cfr13I GGNCC 2 cut(s) 112, 264
Csp6I GTAC 2 cut(s) 202, 309
CviAII CATG 3 cut(s) 85, 154, 408
CviJI RGCY 9 cut(s) 5, 53, 78, 172, 213, 233, 281, 366, 451
CviKI_1 RGCY 9 cut(s) 5, 53, 78, 172, 213, 233, 281, 366, 451
CviQI GTAC 2 cut(s) 202, 309
DdeI CTNAG 1 cut(s) 229
DpnI GATC 3 cut(s) 321, 492, 515
DpnII GATC 3 cut(s) 319, 490, 513
DrdI GACNNNNNNGTC 1 cut(s) 119
DriI GACNNNNNGTC 1 cut(s) 270
DseDI GACNNNNNNGTC 1 cut(s) 119
Eam1105I GACNNNNNGTC 1 cut(s) 270
Eco130I CCWWGG 1 cut(s) 72
Eco31I GGTCTC 1 cut(s) 50
Eco47I GGWCC 2 cut(s) 112, 264
EcoO109I RGGNCCY 1 cut(s) 112
EcoRI GAATTC 1 cut(s) 326
EcoRII CCWGG 1 cut(s) 48
EcoT14I CCWWGG 1 cut(s) 72
ErhI CCWWGG 1 cut(s) 72
FaeI CATG 3 cut(s) 88, 157, 411
FaiI YATR 7 cut(s) 86, 98, 155, 216, 300, 409, 533
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FaqI GGGAC 1 cut(s) 41
FatI CATG 3 cut(s) 84, 153, 407
Fnu4HI GCNGC 1 cut(s) 225
FokI GGATG 1 cut(s) 233
Fsp4HI GCNGC 1 cut(s) 225
GluI GCNGC 1 cut(s) 225
GsuI CTGGAG 1 cut(s) 32
HaeIII GGCC 3 cut(s) 5, 53, 451
HapII CCGG 3 cut(s) 41, 182, 452
Hin1II CATG 3 cut(s) 88, 157, 411
HinfI GANTC 2 cut(s) 23, 37
HpaII CCGG 3 cut(s) 41, 182, 452
HphI GGTGA 2 cut(s) 18, 376
Hpy188I TCNGA 2 cut(s) 276, 355
Hpy188III TCNNGA 5 cut(s) 128, 182, 323, 494, 558
HpyAV CCTTC 1 cut(s) 533
HpyCH4III ACNGT 2 cut(s) 259, 388
HpyCH4IV ACGT 1 cut(s) 424
HpyCH4V TGCA 1 cut(s) 88
HpyF10VI GCNNNNNNNGC 2 cut(s) 224, 230
HpyF3I CTNAG 1 cut(s) 229
HpySE526I ACGT 1 cut(s) 424
Hsp92II CATG 3 cut(s) 88, 157, 411
Kpn2I TCCGGA 1 cut(s) 181
Kzo9I GATC 3 cut(s) 319, 490, 513
LmnI GCTCC 1 cut(s) 238
Lsp1109I GCAGC 1 cut(s) 211
LweI GCATC 2 cut(s) 211, 390
MaeII ACGT 1 cut(s) 424
MaeIII GTNAC 2 cut(s) 500, 541
MalI GATC 3 cut(s) 321, 492, 515
MboI GATC 3 cut(s) 319, 490, 513
MboII GAAGA 1 cut(s) 77
MfeI CAATTG 1 cut(s) 285
MflI RGATCY 2 cut(s) 490, 513
MluCI AATT 6 cut(s) 105, 285, 290, 326, 349, 437
MmeI TCCRAC 1 cut(s) 260
MnlI CCTC 6 cut(s) 16, 19, 162, 238, 369, 408
MroI TCCGGA 1 cut(s) 181
MseI TTAA 4 cut(s) 108, 165, 293, 486
MspCI CTTAAG 1 cut(s) 164
MspI CCGG 3 cut(s) 41, 182, 452
MspR9I CCNGG 2 cut(s) 42, 50
MunI CAATTG 1 cut(s) 285
Mva1269I GAATGC 1 cut(s) 479
MvaI CCWGG 1 cut(s) 50
MwoI GCNNNNNNNGC 2 cut(s) 224, 230
NciI CCSGG 1 cut(s) 42
NdeII GATC 3 cut(s) 319, 490, 513
NlaIII CATG 3 cut(s) 88, 157, 411
NlaIV GGNNCC 2 cut(s) 114, 492
NmuCI GTSAC 1 cut(s) 541
NspI RCATGY 2 cut(s) 157, 411
NspV TTCGAA 1 cut(s) 103
PaeI GCATGC 1 cut(s) 411
PctI GAATGC 1 cut(s) 479
PfeI GAWTC 2 cut(s) 23, 37
PkrI GCNGC 1 cut(s) 226
PpuMI RGGWCCY 1 cut(s) 112
Psp5II RGGWCCY 1 cut(s) 112
Psp6I CCWGG 1 cut(s) 48
PspGI CCWGG 1 cut(s) 48
PspN4I GGNNCC 2 cut(s) 114, 492
PspPI GGNCC 2 cut(s) 112, 264
PspPPI RGGWCCY 1 cut(s) 112
PsuI RGATCY 2 cut(s) 490, 513
RsaI GTAC 2 cut(s) 203, 310
RsaNI GTAC 2 cut(s) 202, 309
SaqAI TTAA 4 cut(s) 108, 165, 293, 486
SatI GCNGC 1 cut(s) 225
Sau3AI GATC 3 cut(s) 319, 490, 513
Sau96I GGNCC 2 cut(s) 112, 264
ScrFI CCNGG 2 cut(s) 42, 50
SetI ASST 8 cut(s) 31, 235, 269, 283, 361, 419, 427, 525
SfaNI GCATC 2 cut(s) 211, 390
SfcI CTRYAG 1 cut(s) 531
SfuI TTCGAA 1 cut(s) 103
SinI GGWCC 2 cut(s) 112, 264
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
SphI GCATGC 1 cut(s) 411
Sse9I AATT 6 cut(s) 105, 285, 290, 326, 349, 437
SsiI CCGC 1 cut(s) 218
StyD4I CCNGG 2 cut(s) 40, 48
StyI CCWWGG 1 cut(s) 72
TaaI ACNGT 2 cut(s) 259, 388
TaiI ACGT 1 cut(s) 427
TaqI TCGA 1 cut(s) 103
TasI AATT 6 cut(s) 105, 285, 290, 326, 349, 437
TatI WGTACW 1 cut(s) 201
TfiI GAWTC 2 cut(s) 23, 37
Tru1I TTAA 4 cut(s) 108, 165, 293, 486
Tru9I TTAA 4 cut(s) 108, 165, 293, 486
TseFI GTSAC 1 cut(s) 541
TseI GCWGC 1 cut(s) 224
Tsp45I GTSAC 1 cut(s) 541
TspDTI ATGAA 4 cut(s) 78, 203, 472, 482
Vha464I CTTAAG 1 cut(s) 164
VpaK11BI GGWCC 2 cut(s) 112, 264
XapI RAATTY 2 cut(s) 326, 437
XceI RCATGY 2 cut(s) 157, 411
XcmI CCANNNNNNNNNTGG 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.