Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000452

Physical Location & Seq

Genomic Coordinates Reverse (-)

27017236 .. 27024171

Gene Structure 6936 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0279800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGGTTGGAGAAATGCGTTCGATAACTCGAAGCCACTGTTCGTGGCTGTATACGCCACCGTCATTGTTGGGATTCTCTTCTCATCTTTGTATGTCATATCCGCCATTTACTCCGGCAAGGCTGCTACATTTTCCGCCACCTCCTTTCAGAACAATGTTGGTTCTTCGTCTTTAGAGCAAGCACCCAATGTTTCACAACCGGGGATTGTTCAAGGGGTGTCCACACCTAAATTCGAGAGTCAAAATGTGTCGATGAGGCCTATTTGGGAAGCTCCCCCACGCACAAAGAAAATGCCACGGTTGAAGACTTTTAGACTGACCAAAGAACTGGTTCAGCAAAGAGTGAAGGATAATGTAGTTATAGTGACGTTTGGTAACTATGCATTTATGGATTTTATCCTGACATGGGTTAAGCACTTGACTGATCTGGGGATTTCTAACCTTCTCGTTGGTGCAATGGATACCAAACTGTTGGAGGCTTTGTATTGGAAAGGTGTTCCAGTATTTGATATGGGCAGCCATATGAGCACAATAGATGTTGGATGGGGATCGCCGACATTCCATAAGATGGGAAGAGAAAAAGTTATACTGATAGACTCAATCCTCCCGTATGGTTTTGAGCTCTTGATGTGTGATACAGACATGGTTTGGTTAAAGAACCCTCTTCCATTTCTTGCCCGCTATCCTGAAGCAGATGTCCTAACGTCCAGTGATCAAGTTGTACCAACAGTAGCTGATGATAGGCTGGACATCTGGCAACAAGTTGGTGCTGCCTATAATATTGGAATTTTCCACTGGCGGCCAACAGACCCTGCTAAAAAATTGGCTAAAGAATGGAAAGATATGCTTCTAGCTGATGACAAGATATGGGACCAGAATGGGTTTAATGATCTCGTAAGGAAGCAGTTAGGACCATCTGTTGATGGAGAAAGTGAACTTGTATATGCTTATGATGGAAGTCTCAAGCTAGGAATTTTGCCTGCGAGTATATTTTGTAGTGGGCATACATATTTTGTCCAGGCCATGTACCAGCAATTGAGGTTGGAGCCGTATGCAGTGCATACCACGTTCCAGTATGCGGGTACTGATGGAAAGCGCCACCGACTACGTGAAGGAATGGTTTTCTATGACCCGCCAGAATACTATGATGCACCAGGGGGGTTTTTGACTTTTAAGCCATCTATTCCTAAGATCTTGTTACTTGAGGGGCAGCATACTGTTGAATCACATTTTGCTCTTGTTAATTACCAAATAAAACAAATAAGGACGGCACTTGCTATTGCTTCTGTGTTAAATCGCACCCTGGTCATGCCTCCACTATGGTGCAGGTTGGACAGGCTGTGGTTTCCCCACCCTGGAGTTCTCGAGGGATCTTTGACTAGACAGCCTTTTCTTTGCCCTCTAGACCATGTATTTGAGGTAAATGTCATGCTCAAGGAACTGCCAGTGGAAGAATTTGGGCCCCAGATCAATATTAGAGAGTACTCATTCTTTGACAATCCATTGATGCCAAAACAGGTGAAAGATTCATGGCTTGAAGTCCAGCTTTGTCGAGAAGGAATTCGAGACTGTCTGGCATCAAATAATACAAGCCCATCAGGAGTGCTCAGATTTCCAAAGAGAAGCAGTGAAGAGACGTTAAAGACAGTATTTTCCTTGTTCAAAGATGTCAAAGTAATTCAGTTTTCATCAATGCAAGATGCGTTCCTTGGTTTTGCTGACAAGATAAGGGAAGAGAGATTCAGGAATCGCGTGAAGCGATACGTTGGTATATGGTGTTGTGTAGCTGAACATACTCCTGGCCACATATATTATGACATGTACTGGGATGAGAAACCAGGTTGGAAACCTATCCCACCTCAAAACCCACAGGATGACCACCCACCACCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

630

Amino Acids

71.82

Weight (kDa)

6.72

Isoelectric Point (pI)

40.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nucleotid_trans	PF03407	145 - 369	2.7e-52	Nucleotide-diphospho-sugar transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000452)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0066100 Rorug01G0066100 Rorug01G0069900 Rorug01G0089700 Rorug01G0090100 Rorug01G0097600 Rorug01G0099600 Rorug01G0101900 Rorug01G0102400 Rorug01G0118300 Rorug01G0124800 Rorug01G0169500 Rorug01G0238100 Rorug01G0451600 Rorug02G0188700 Rorug02G0229300 Rorug02G0253000 Rorug02G0256200 Rorug02G0258900 Rorug02G0339200 Rorug02G0392100 Rorug02G0491500 Rorug03G0141200 Rorug03G0192500 Rorug03G0200300 Rorug03G0218600 Rorug03G0269500 Rorug03G0269700 Rorug03G0272400 Rorug03G0276400 Rorug03G0283800 Rorug03G0334100 Rorug03G0356200 Rorug04G0002200 Rorug04G0008300 Rorug04G0031200 Rorug04G0040800 Rorug04G0063000 Rorug04G0069500.1 Rorug04G0070200 Rorug04G0114400 Rorug04G0181100 Rorug04G0205700 Rorug05G0004000 Rorug05G0018000 Rorug05G0018100 Rorug05G0090500 Rorug05G0108800 Rorug05G0118900 Rorug05G0202300 Rorug05G0214200 Rorug05G0243800 Rorug05G0243900 Rorug05G0266300 Rorug05G0272500 Rorug05G0276400 Rorug05G0291500 Rorug05G0293800 Rorug05G0350400 Rorug05G0360900 Rorug05G0369500 Rorug05G0370100 Rorug05G0370500 Rorug05G0407800 Rorug05G0418900 Rorug05G0524200 Rorug05G0526800 Rorug05G0547200 Rorug06G0004100 Rorug06G0015000 Rorug06G0027300 Rorug06G0048200 Rorug06G0059100 Rorug06G0066200 Rorug06G0128100 Rorug06G0363800.1 Rorug07G0031500 Rorug07G0184700 Rorug07G0185600 Rorug07G0189600 Rorug07G0196500 Rorug07G0200700 Rorug07G0219700 Rorug07G0219900 Rorug07G0219900 Rorug07G0223000 Rorug07G0223000 Rorug07G0230800 Rorug07G0243500 Rorug07G0244700 Rorug07G0245700 Rorug07G0279800 Rorug07G0305800

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0066100 Rorug01G0066100 Rorug01G0069900 Rorug01G0089700 Rorug01G0090100 Rorug01G0097600 Rorug01G0099600 Rorug01G0101900 Rorug01G0102400 Rorug01G0118300 Rorug01G0124800 Rorug01G0169500 Rorug01G0238100 Rorug01G0451600 Rorug02G0188700 Rorug02G0229300 Rorug02G0253000 Rorug02G0256200 Rorug02G0258900 Rorug02G0339200 Rorug02G0392100 Rorug02G0491500 Rorug03G0141200 Rorug03G0192500 Rorug03G0200300 Rorug03G0218600 Rorug03G0269500 Rorug03G0269700 Rorug03G0272400 Rorug03G0276400 Rorug03G0283800 Rorug03G0334100 Rorug03G0356200 Rorug04G0002200 Rorug04G0008300 Rorug04G0031200 Rorug04G0040800 Rorug04G0063000 Rorug04G0069500.1 Rorug04G0070200 Rorug04G0114400 Rorug04G0181100 Rorug04G0205700 Rorug05G0004000 Rorug05G0018000 Rorug05G0018100 Rorug05G0090500 Rorug05G0108800 Rorug05G0118900 Rorug05G0202300 Rorug05G0214200 Rorug05G0243800 Rorug05G0243900 Rorug05G0266300 Rorug05G0272500 Rorug05G0276400 Rorug05G0291500 Rorug05G0293800 Rorug05G0350400 Rorug05G0360900 Rorug05G0369500 Rorug05G0370100 Rorug05G0370500 Rorug05G0407800 Rorug05G0418900 Rorug05G0524200 Rorug05G0526800 Rorug05G0547200 Rorug06G0004100 Rorug06G0015000 Rorug06G0027300 Rorug06G0048200 Rorug06G0059100 Rorug06G0066200 Rorug06G0128100 Rorug06G0363800.1 Rorug07G0031500 Rorug07G0184700 Rorug07G0185600 Rorug07G0189600 Rorug07G0196500 Rorug07G0200700 Rorug07G0219700 Rorug07G0219900 Rorug07G0219900 Rorug07G0223000 Rorug07G0223000 Rorug07G0230800 Rorug07G0243500 Rorug07G0244700 Rorug07G0245700 Rorug07G0279800 Rorug07G0305800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1317
AccB7I	CCANNNNNTGG	1 cut(s)	568
AccI	GTMKAC	1 cut(s)	51
AccII	CGCG	1 cut(s)	1752
AciI	CCGC	6 cut(s)	102, 135, 679, 799, 1079, 1133
AclWI	GGATC	2 cut(s)	556, 1378
AcoI	YGGCCR	2 cut(s)	800, 1801
AcsI	RAATTY	5 cut(s)	230, 786, 972, 1454, 1560
AcuI	CTGAAG	1 cut(s)	708
AfaI	GTAC	5 cut(s)	723, 1028, 1084, 1484, 1823
AfiI	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
AflIII	ACRYGT	1 cut(s)	1818
AgsI	TTSAA	5 cut(s)	212, 304, 1223, 1538, 1663
AjnI	CCWGG	6 cut(s)	1017, 1153, 1302, 1354, 1798, 1837
AleI	CACNNNNGTG	2 cut(s)	1321, 1888
AluBI	AGCT	7 cut(s)	272, 622, 734, 854, 967, 1546, 1787
AluI	AGCT	7 cut(s)	272, 622, 734, 854, 967, 1546, 1787
Alw21I	GWGCWC	3 cut(s)	530, 624, 1608
Alw26I	GTCTC	3 cut(s)	965, 1560, 1628
AlwI	GGATC	2 cut(s)	556, 1378
AlwNI	CAGNNNCTG	2 cut(s)	734, 812
Ama87I	CYCGRG	1 cut(s)	1364
AoxI	GGCC	5 cut(s)	257, 800, 1020, 1460, 1801
ApaI	GGGCCC	1 cut(s)	1464
ApeKI	GCWGC	4 cut(s)	122, 516, 770, 1210
ApoI	RAATTY	5 cut(s)	230, 786, 972, 1454, 1560
ArsI	GACNNNNNNTTYG	2 cut(s)	1397, 1429
Asp700I	GAANNNNTTC	2 cut(s)	330, 1560
AspLEI	GCGC	1 cut(s)	1098
AspS9I	GGNCC	4 cut(s)	871, 911, 1460, 1461
AsuC2I	CCSGG	1 cut(s)	201
AsuHPI	GGTGA	1 cut(s)	1531
AvaI	CYCGRG	1 cut(s)	1364
AvaII	GGWCC	2 cut(s)	871, 911
BaeGI	GKGCMC	1 cut(s)	1464
BaeI	ACNNNNGTAYC	2 cut(s)	1753, 1786
BalI	TGGCCA	1 cut(s)	1803
BanII	GRGCYC	2 cut(s)	624, 1464
BbsI	GAAGAC	1 cut(s)	311
Bbv12I	GWGCWC	3 cut(s)	530, 624, 1608
BbvI	GCAGC	4 cut(s)	109, 528, 757, 1222
BccI	CCATC	8 cut(s)	537, 562, 917, 922, 947, 1082, 1186, 1603
BceAI	ACGGC	2 cut(s)	1033, 1284
BciT130I	CCWGG	6 cut(s)	1019, 1155, 1304, 1356, 1800, 1839
BciVI	GTATCC	1 cut(s)	454
BclI	TGATCA	1 cut(s)	712
BcnI	CCSGG	1 cut(s)	201
BcoDI	GTCTC	3 cut(s)	965, 1560, 1628
BfaI	CTAG	4 cut(s)	851, 968, 1380, 1403
BfoI	RGCGCY	1 cut(s)	1099
BfuAI	ACCTGC	1 cut(s)	1317
BfuI	GTATCC	1 cut(s)	454
BglII	AGATCT	1 cut(s)	1191
BisI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
BlsI	GCNGC	5 cut(s)	124, 518, 772, 801, 1212
BmcAI	AGTACT	1 cut(s)	1484
Bme1390I	CCNGG	7 cut(s)	201, 1019, 1155, 1304, 1356, 1800, 1839
Bme18I	GGWCC	2 cut(s)	871, 911
BmeT110I	CYCGRG	1 cut(s)	1364
BmgT120I	GGNCC	4 cut(s)	871, 911, 1460, 1461
BmiI	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
BmrFI	CCNGG	7 cut(s)	201, 1019, 1155, 1304, 1356, 1800, 1839
BmrI	ACTGGG	1 cut(s)	1834
BmsI	GCATC	4 cut(s)	1138, 1497, 1586, 1690
BmuI	ACTGGG	1 cut(s)	1834
BpiI	GAAGAC	1 cut(s)	311
BpmI	CTGGAG	1 cut(s)	1377
BpuEI	CTTGAG	3 cut(s)	947, 1223, 1418
BpuMI	CCSGG	1 cut(s)	201
BsaAI	YACGTR	1 cut(s)	1109
BsaBI	GATNNNNATC	1 cut(s)	547
BsaJI	CCNNGG	6 cut(s)	200, 296, 1154, 1302, 1354, 1708
BsaXI	ACNNNNNCTCC	2 cut(s)	467, 497
Bsc4I	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
Bse1I	ACTGG	7 cut(s)	333, 500, 708, 800, 1072, 1445, 1829
Bse3DI	GCAATG	1 cut(s)	462
Bse8I	GATNNNNATC	1 cut(s)	547
BseBI	CCWGG	6 cut(s)	1019, 1155, 1304, 1356, 1800, 1839
BseDI	CCNNGG	6 cut(s)	200, 296, 1154, 1302, 1354, 1708
BseGI	GGATG	3 cut(s)	548, 1834, 1879
BseJI	GATNNNNATC	1 cut(s)	547
BseLI	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
BseMI	GCAATG	1 cut(s)	462
BseMII	CTCAG	1 cut(s)	1621
BseNI	ACTGG	7 cut(s)	333, 500, 708, 800, 1072, 1445, 1829
BseSI	GKGCMC	1 cut(s)	1464
BseXI	GCAGC	4 cut(s)	109, 528, 757, 1222
BsgI	GTGCAG	1 cut(s)	1345
Bsh1236I	CGCG	1 cut(s)	1752
BshFI	GGCC	5 cut(s)	259, 802, 1022, 1462, 1803
BsiHKAI	GWGCWC	3 cut(s)	530, 624, 1608
BsiHKCI	CYCGRG	1 cut(s)	1364
BsiSI	CCGG	2 cut(s)	114, 200
BslFI	GGGAC	1 cut(s)	884
BslI	CCNNNNNNNGG	4 cut(s)	406, 568, 1078, 1355
BsmAI	GTCTC	3 cut(s)	965, 1560, 1628
BsmBI	CGTCTC	1 cut(s)	1628
BsmFI	GGGAC	1 cut(s)	884
BsnI	GGCC	5 cut(s)	259, 802, 1022, 1462, 1803
BsoBI	CYCGRG	1 cut(s)	1364
Bsp120I	GGGCCC	1 cut(s)	1460
Bsp1286I	GDGCHC	4 cut(s)	530, 624, 1464, 1608
Bsp143I	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
BspACI	CCGC	6 cut(s)	102, 135, 679, 799, 1079, 1133
BspANI	GGCC	5 cut(s)	259, 802, 1022, 1462, 1803
BspCNI	CTCAG	1 cut(s)	1620
BspFNI	CGCG	1 cut(s)	1752
BspLI	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
BspMI	ACCTGC	1 cut(s)	1317
BspPI	GGATC	2 cut(s)	556, 1378
BsrDI	GCAATG	1 cut(s)	462
BsrI	ACTGG	7 cut(s)	333, 500, 708, 800, 1072, 1445, 1829
BssECI	CCNNGG	6 cut(s)	200, 296, 1154, 1302, 1354, 1708
BssMI	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
BssNAI	GTATAC	1 cut(s)	52
BssT1I	CCWWGG	1 cut(s)	1708
Bst1107I	GTATAC	1 cut(s)	52
Bst2UI	CCWGG	6 cut(s)	1019, 1155, 1304, 1356, 1800, 1839
Bst4CI	ACNGT	9 cut(s)	39, 61, 300, 471, 730, 1219, 1571, 1648, 1890
Bst6I	CTCTTC	5 cut(s)	83, 568, 669, 1626, 1728
BstBAI	YACGTR	1 cut(s)	1109
BstC8I	GCNNGC	3 cut(s)	180, 679, 981
BstDEI	CTNAG	2 cut(s)	1188, 1607
BstDSI	CCRYGG	1 cut(s)	296
BstF5I	GGATG	3 cut(s)	548, 1834, 1879
BstFNI	CGCG	1 cut(s)	1752
BstH2I	RGCGCY	1 cut(s)	1099
BstHHI	GCGC	1 cut(s)	1098
BstKTI	GATC	7 cut(s)	427, 551, 715, 892, 1194, 1373, 1470
BstMAI	GTCTC	3 cut(s)	965, 1560, 1628
BstMBI	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
BstMWI	GCNNNNNNNGC	2 cut(s)	53, 525
BstNI	CCWGG	6 cut(s)	1019, 1155, 1304, 1356, 1800, 1839
BstNSI	RCATGY	1 cut(s)	1822
BstSCI	CCNGG	7 cut(s)	199, 1017, 1153, 1302, 1354, 1798, 1837
BstSLI	GKGCMC	1 cut(s)	1464
BstUI	CGCG	1 cut(s)	1752
BstV1I	GCAGC	4 cut(s)	109, 528, 757, 1222
BstV2I	GAAGAC	1 cut(s)	311
BstX2I	RGATCY	2 cut(s)	1191, 1370
BstXI	CCANNNNNNTGG	2 cut(s)	328, 472
BstYI	RGATCY	2 cut(s)	1191, 1370
BstZ17I	GTATAC	1 cut(s)	52
BsuI	GTATCC	1 cut(s)	454
BsuRI	GGCC	5 cut(s)	259, 802, 1022, 1462, 1803
BtgI	CCRYGG	1 cut(s)	296
BtsCI	GGATG	3 cut(s)	548, 1834, 1879
BtsI	GCAGTG	2 cut(s)	1062, 1633
BtsIMutI	CAGTG	6 cut(s)	35, 715, 793, 1062, 1452, 1633
BveI	ACCTGC	1 cut(s)	1317
Cac8I	GCNNGC	3 cut(s)	180, 679, 981
CaiI	CAGNNNCTG	2 cut(s)	734, 812
CfoI	GCGC	1 cut(s)	1098
Cfr13I	GGNCC	4 cut(s)	871, 911, 1460, 1461
CsiI	ACCWGGT	1 cut(s)	1837
Csp6I	GTAC	5 cut(s)	722, 1027, 1083, 1483, 1822
CspCI	CAANNNNNGTGG	2 cut(s)	46, 81
CviAII	CATG	8 cut(s)	405, 643, 1024, 1309, 1409, 1429, 1530, 1819
CviQI	GTAC	5 cut(s)	722, 1027, 1083, 1483, 1822
DdeI	CTNAG	2 cut(s)	1188, 1607
DpnI	GATC	7 cut(s)	426, 550, 714, 891, 1193, 1372, 1469
DpnII	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
EaeI	YGGCCR	2 cut(s)	800, 1801
Eam1104I	CTCTTC	5 cut(s)	83, 568, 669, 1626, 1728
EarI	CTCTTC	5 cut(s)	83, 568, 669, 1626, 1728
EciI	GGCGGA	2 cut(s)	91, 124
Ecl136II	GAGCTC	1 cut(s)	622
Eco130I	CCWWGG	1 cut(s)	1708
Eco147I	AGGCCT	1 cut(s)	259
Eco24I	GRGCYC	2 cut(s)	624, 1464
Eco47I	GGWCC	2 cut(s)	871, 911
Eco53kI	GAGCTC	1 cut(s)	622
Eco57I	CTGAAG	1 cut(s)	708
Eco88I	CYCGRG	1 cut(s)	1364
EcoICRI	GAGCTC	1 cut(s)	622
EcoO109I	RGGNCCY	1 cut(s)	1461
EcoRI	GAATTC	1 cut(s)	1560
EcoRII	CCWGG	6 cut(s)	1017, 1153, 1302, 1354, 1798, 1837
EcoT14I	CCWWGG	1 cut(s)	1708
EcoT22I	ATGCAT	1 cut(s)	385
EcoT38I	GRGCYC	2 cut(s)	624, 1464
ErhI	CCWWGG	1 cut(s)	1708
Esp3I	CGTCTC	1 cut(s)	1628
FaeI	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
FalI	AAGNNNNNCTT	4 cut(s)	831, 863, 1530, 1562
FaqI	GGGAC	1 cut(s)	884
FatI	CATG	8 cut(s)	404, 642, 1023, 1308, 1408, 1428, 1529, 1818
FauI	CCCGC	3 cut(s)	686, 1072, 1140
FauNDI	CATATG	1 cut(s)	522
FbaI	TGATCA	1 cut(s)	712
FblI	GTMKAC	1 cut(s)	51
Fnu4HI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
FokI	GGATG	3 cut(s)	555, 1841, 1886
FriOI	GRGCYC	2 cut(s)	624, 1464
Fsp4HI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
FspBI	CTAG	4 cut(s)	851, 968, 1380, 1403
GlaI	GCGC	1 cut(s)	1097
GluI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
GsuI	CTGGAG	1 cut(s)	1377
HaeII	RGCGCY	1 cut(s)	1099
HaeIII	GGCC	5 cut(s)	259, 802, 1022, 1462, 1803
HapII	CCGG	2 cut(s)	114, 200
HhaI	GCGC	1 cut(s)	1098
Hin1II	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
Hin6I	GCGC	1 cut(s)	1096
HinP1I	GCGC	1 cut(s)	1096
HinfI	GANTC	7 cut(s)	73, 238, 596, 1223, 1526, 1740, 1747
HpaII	CCGG	2 cut(s)	114, 200
HphI	GGTGA	1 cut(s)	1531
Hpy166II	GTNNAC	3 cut(s)	52, 222, 935
Hpy188I	TCNGA	2 cut(s)	150, 1610
Hpy8I	GTNNAC	3 cut(s)	52, 222, 935
HpyAV	CCTTC	4 cut(s)	340, 452, 1106, 1550
HpyCH4III	ACNGT	9 cut(s)	39, 61, 300, 471, 730, 1219, 1571, 1648, 1890
HpyCH4IV	ACGT	6 cut(s)	368, 704, 1067, 1108, 1637, 1764
HpyCH4V	TGCA	7 cut(s)	383, 455, 1055, 1060, 1151, 1326, 1696
HpyF10VI	GCNNNNNNNGC	2 cut(s)	53, 525
HpyF3I	CTNAG	2 cut(s)	1188, 1607
HpySE526I	ACGT	6 cut(s)	368, 704, 1067, 1108, 1637, 1764
Hsp92II	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
HspAI	GCGC	1 cut(s)	1096
Ksp22I	TGATCA	1 cut(s)	712
Kzo9I	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
LmnI	GCTCC	2 cut(s)	277, 1045
Lsp1109I	GCAGC	4 cut(s)	109, 528, 757, 1222
LweI	GCATC	4 cut(s)	1138, 1497, 1586, 1690
MabI	ACCWGGT	1 cut(s)	1837
MaeI	CTAG	4 cut(s)	851, 968, 1380, 1403
MaeII	ACGT	6 cut(s)	368, 704, 1067, 1108, 1637, 1764
MaeIII	GTNAC	3 cut(s)	364, 374, 1197
MalI	GATC	7 cut(s)	426, 550, 714, 891, 1193, 1372, 1469
MboI	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
MboII	GAAGA	8 cut(s)	70, 156, 316, 585, 656, 1463, 1643, 1745
MfeI	CAATTG	1 cut(s)	1034
MflI	RGATCY	2 cut(s)	1191, 1370
MhlI	GDGCHC	4 cut(s)	530, 624, 1464, 1608
MlsI	TGGCCA	1 cut(s)	1803
MluCI	AATT	9 cut(s)	230, 786, 821, 972, 1034, 1243, 1454, 1560, 1677
MluNI	TGGCCA	1 cut(s)	1803
MlyI	GAGTC	2 cut(s)	247, 590
MmeI	TCCRAC	5 cut(s)	453, 520, 1023, 1311, 1823
Mox20I	TGGCCA	1 cut(s)	1803
Mph1103I	ATGCAT	1 cut(s)	385
MroXI	GAANNNNTTC	2 cut(s)	330, 1560
MscI	TGGCCA	1 cut(s)	1803
MseI	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
MslI	CAYNNNNRTG	2 cut(s)	1321, 1888
Msp20I	TGGCCA	1 cut(s)	1803
MspI	CCGG	2 cut(s)	114, 200
MspR9I	CCNGG	7 cut(s)	201, 1019, 1155, 1304, 1356, 1800, 1839
MunI	CAATTG	1 cut(s)	1034
MvaI	CCWGG	6 cut(s)	1019, 1155, 1304, 1356, 1800, 1839
MvnI	CGCG	1 cut(s)	1752
MwoI	GCNNNNNNNGC	2 cut(s)	53, 525
NciI	CCSGG	1 cut(s)	201
NdeI	CATATG	1 cut(s)	522
NdeII	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
NlaIII	CATG	8 cut(s)	408, 646, 1027, 1312, 1412, 1432, 1533, 1822
NlaIV	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
NmuCI	GTSAC	1 cut(s)	364
NsiI	ATGCAT	1 cut(s)	385
NspI	RCATGY	1 cut(s)	1822
OliI	CACNNNNGTG	2 cut(s)	1321, 1888
PaeR7I	CTCGAG	1 cut(s)	1364
PceI	AGGCCT	1 cut(s)	259
PciI	ACATGT	1 cut(s)	1818
PcsI	WCGNNNNNNNCGW	1 cut(s)	1756
PdmI	GAANNNNTTC	2 cut(s)	330, 1560
PfeI	GAWTC	5 cut(s)	73, 1223, 1526, 1740, 1747
PflMI	CCANNNNNTGG	1 cut(s)	568
PkrI	GCNGC	5 cut(s)	124, 518, 772, 801, 1212
PleI	GAGTC	2 cut(s)	246, 590
PpsI	GAGTC	2 cut(s)	246, 590
Ppu21I	YACGTR	1 cut(s)	1109
PscI	ACATGT	1 cut(s)	1818
Psp124BI	GAGCTC	1 cut(s)	624
Psp6I	CCWGG	6 cut(s)	1017, 1153, 1302, 1354, 1798, 1837
PspGI	CCWGG	6 cut(s)	1017, 1153, 1302, 1354, 1798, 1837
PspN4I	GGNNCC	4 cut(s)	872, 1047, 1462, 1463
PspOMI	GGGCCC	1 cut(s)	1460
PspPI	GGNCC	4 cut(s)	871, 911, 1460, 1461
PstNI	CAGNNNCTG	2 cut(s)	734, 812
PsuI	RGATCY	2 cut(s)	1191, 1370
RsaI	GTAC	5 cut(s)	723, 1028, 1084, 1484, 1823
RsaNI	GTAC	5 cut(s)	722, 1027, 1083, 1483, 1822
RseI	CAYNNNNRTG	2 cut(s)	1321, 1888
SacI	GAGCTC	1 cut(s)	624
SaqAI	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
SatI	GCNGC	5 cut(s)	123, 517, 771, 800, 1211
Sau3AI	GATC	7 cut(s)	424, 548, 712, 889, 1191, 1370, 1467
Sau96I	GGNCC	4 cut(s)	871, 911, 1460, 1461
ScaI	AGTACT	1 cut(s)	1484
SchI	GAGTC	2 cut(s)	247, 590
ScrFI	CCNGG	7 cut(s)	201, 1019, 1155, 1304, 1356, 1800, 1839
SduI	GDGCHC	4 cut(s)	530, 624, 1464, 1608
SexAI	ACCWGGT	1 cut(s)	1837
SfaNI	GCATC	4 cut(s)	1138, 1497, 1586, 1690
Sfr274I	CTCGAG	1 cut(s)	1364
SinI	GGWCC	2 cut(s)	871, 911
SlaI	CTCGAG	1 cut(s)	1364
SmiMI	CAYNNNNRTG	2 cut(s)	1321, 1888
SmlI	CTYRAG	4 cut(s)	962, 1202, 1364, 1433
SmoI	CTYRAG	4 cut(s)	962, 1202, 1364, 1433
Sse9I	AATT	9 cut(s)	230, 786, 821, 972, 1034, 1243, 1454, 1560, 1677
SseBI	AGGCCT	1 cut(s)	259
SsiI	CCGC	6 cut(s)	102, 135, 679, 799, 1079, 1133
SspI	AATATT	2 cut(s)	781, 1474
SspMI	CTAG	4 cut(s)	851, 968, 1380, 1403
SstI	GAGCTC	1 cut(s)	624
StuI	AGGCCT	1 cut(s)	259
StyD4I	CCNGG	7 cut(s)	199, 1017, 1153, 1302, 1354, 1798, 1837
StyI	CCWWGG	1 cut(s)	1708
TaaI	ACNGT	9 cut(s)	39, 61, 300, 471, 730, 1219, 1571, 1648, 1890
TaiI	ACGT	6 cut(s)	371, 707, 1070, 1111, 1640, 1767
TaqI	TCGA	7 cut(s)	21, 29, 234, 251, 1365, 1552, 1564
TasI	AATT	9 cut(s)	230, 786, 821, 972, 1034, 1243, 1454, 1560, 1677
TatI	WGTACW	2 cut(s)	1482, 1821
TauI	GCSGC	1 cut(s)	802
TfiI	GAWTC	5 cut(s)	73, 1223, 1526, 1740, 1747
Tru1I	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
Tru9I	TTAA	7 cut(s)	411, 653, 885, 1173, 1242, 1292, 1640
TscAI	CASTG	6 cut(s)	42, 715, 800, 1062, 1452, 1633
TseFI	GTSAC	1 cut(s)	364
TseI	GCWGC	4 cut(s)	122, 516, 770, 1210
Tsp45I	GTSAC	1 cut(s)	364
TspDTI	ATGAA	2 cut(s)	1518, 1677
TspRI	CASTG	6 cut(s)	42, 715, 800, 1062, 1452, 1633
Van91I	CCANNNNNTGG	1 cut(s)	568
VpaK11BI	GGWCC	2 cut(s)	871, 911
XapI	RAATTY	5 cut(s)	230, 786, 972, 1454, 1560
XbaI	TCTAGA	1 cut(s)	1402
XceI	RCATGY	1 cut(s)	1822
XhoI	CTCGAG	1 cut(s)	1364
XmiI	GTMKAC	1 cut(s)	51
XmnI	GAANNNNTTC	2 cut(s)	330, 1560
XspI	CTAG	4 cut(s)	851, 968, 1380, 1403
ZrmI	AGTACT	1 cut(s)	1484
Zsp2I	ATGCAT	1 cut(s)	385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.