RchiOBHm_Chr3g0483111

Pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0006370
Physical Location & Seq
Forward (+)
29244888 .. 29246611
1724 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ44789

Sequence Viewer

Length: 1521 bp
ATGGCACAGTGTCGCTTCTCCTCCTCTCTTCTTCTCCGTCTCCGTTCAGCTCGCCGGTTCTCCTCACTCCCCAACCCAACAACAACCCAAAACGACGCCGAACTGGTATCAAACATCCTCCTCCACCACCACAACCCCTTCCACGCCATGGAGTCCTCTCTCCAGCTCCACGGCATCACTCTCTCCCCCGACCTCCTCCACCACACTCTCCTCCGCCTCAAGCACAATTCCAAAATCGCCCTCGCCCTCTTCCACTACGCCAAATCCCTCCCCTCCCCCCCGCCCCTCACCTCCCACGCCTTCCACCTCCTCATCGACATCGTCGCCAAGGTCCGCCAGTACGACGTCGCTTGGCAGCTCATCCTCGAAATGGACCGCCACAACCTCACCCCCACCGCCGCCACCTTCCTCATCCTCATCCGCCGCCTCATCGCCTCCGGCCTCACCCGCCAGGCCGTCCGGGCCTTCGACGACATCGAGACCTTCGTCCTGACCCGCCCCACCGCCCAAGACTTCTGCTCTCTACTCGACACCCTCTGTAAATACGGCTACGTTAAGGTCGCGGCTGAAGTTTTCAACAAAAGGAAGCATGACTATGTGGCCGATGTGAAAATGTACACTGTTCTGGTTTACGGGTGGTGTAAGATCGGCCGTTTCGATATGGCGGAGAGGTTCTTGAGGGATATGATCGAGCGAGGTATTGAGCCTAATGTGGTTACTTACAATGTGTTTCTGGATGGGATTTGTAGGAAGGCGAGTTTGCACCCTCAGGACAGGTTTGAGAGGACCATAAGAAATGCACTGAAGGTGTTCGATGAAATGTCCAGCAGAGGCATTGAGCCGGACGTGACTAGTTTTTCGATCCTTCTTCATGTTTATAGCCGGGCGCATAAGCCCCAGTTGTCGCTTGATAAGCTGAAGGAAATGAGGGAGAGGGGGATTTGTCCCACCGTGGCAACGTACACTTCAGTTGTCAAGTGTCTCTGCTCTTGCGGAAGGCTTGAGGAAGCGGAGGATTTGCTTGGTGAGATGGTGAGGAATGGGGTTAGTCCCTCTGCGGCTACGTATAATTGTTTCTTCAAAGAGTACAGGGGGAGAAAGGACTCGGAAAGCGCTTTGAAGTTGTATAGGAAGATGAAGGAGGATAGATTGTTTGCGCCGAGTGTGCACACTTATAATATATTGGTGGGGATGTTTTTGCAGTTGAATCGAGTGGAGATTGTTAGAGAGATATGGGATGACATGAAAGAGAGCGGGGCGGGGCCAGATTTGGATTCGTATACGATGTTGATTCATGGGCTATGTGAGAAGCAGAAGTGGAGAGAGGCGTGCCAGTTTTTTGTGGAGATGATAGAGAAGGGGCTTCTTCCTCAGAAAGTTACTTTTGAGACGCTTTACAGAGGGTTAATACAGTCTGATATGTTGAGAACTTGGAGAAGATTGAAGAAGAAGCTCGATGAAGAGTCTGTTACTTTTGGATCGGAGTTCCAAAATTATCACCTTAAGCCATACAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

506

Amino Acids

58.57

Weight (kDa)

9.1

Isoelectric Point (pI)

46.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 100 - 143 8.5e-06 PPR repeat family
PPR_3 PF13812 201 - 246 8.6e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 202 - 250 8.5e-14 PPR repeat family
PPR_long PF17177 228 - 357 1.4e-10 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 264 - 293 5.5e-07 PPR repeat family
PPR_3 PF13812 269 - 326 8e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 288 - 329 9.8e-07 PPR repeat family
TPR_24 PF23276 290 - 404 2.1e-06 Fungal tetratrico peptide repeats
PPR_1 PF12854 312 - 345 1.1e-10 PPR repeat
PPR PF01535 320 - 349 3.3e-08 PPR repeat
PPR_2 PF13041 323 - 362 4.4e-09 PPR repeat family
PPR_3 PF13812 340 - 399 4.6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 355 - 399 1.5e-07 PPR repeat family
PPR_2 PF13041 387 - 435 9.3e-12 PPR repeat family
PPR_2 PF13041 422 - 469 2.8e-10 PPR repeat family
PPR_1 PF12854 422 - 450 7.1e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1176
AatII GACGTC 1 cut(s) 348
AccB7I CCANNNNNTGG 1 cut(s) 148
AccBSI CCGCTC 1 cut(s) 1254
AccI GTMKAC 1 cut(s) 1280
AccII CGCG 1 cut(s) 563
AclWI GGATC 2 cut(s) 856, 1486
AcoI YGGCCR 2 cut(s) 600, 649
AcuI CTGAAG 4 cut(s) 588, 824, 938, 951
AcyI GRCGYC 2 cut(s) 96, 345
AfaI GTAC 4 cut(s) 341, 617, 962, 1088
AfeI AGCGCT 1 cut(s) 1114
AfiI CCNNNNNNNGG 2 cut(s) 148, 370
AflII CTTAAG 1 cut(s) 1502
AgsI TTSAA 5 cut(s) 577, 1081, 1120, 1207, 1444
AhlI ACTAGT 1 cut(s) 851
AjiI CACGTC 1 cut(s) 847
AjnI CCWGG 1 cut(s) 450
AluBI AGCT 5 cut(s) 50, 166, 358, 916, 1453
AluI AGCT 5 cut(s) 50, 166, 358, 916, 1453
Alw21I GWGCWC 1 cut(s) 1170
Alw26I GTCTC 4 cut(s) 44, 473, 986, 1382
Alw44I GTGCAC 1 cut(s) 1166
AlwI GGATC 2 cut(s) 856, 1486
Aor51HI AGCGCT 1 cut(s) 1114
AoxI GGCC 6 cut(s) 439, 453, 462, 600, 649, 1262
ApaLI GTGCAC 1 cut(s) 1166
ApeKI GCWGC 1 cut(s) 355
ArsI GACNNNNNNTTYG 2 cut(s) 841, 873
Asp700I GAANNNNTTC 1 cut(s) 809
AspLEI GCGC 3 cut(s) 889, 1115, 1159
AspS9I GGNCC 5 cut(s) 331, 373, 462, 786, 1262
AsuC2I CCSGG 2 cut(s) 461, 884
AsuHPI GGTGA 6 cut(s) 280, 379, 436, 1037, 1045, 1490
AvaII GGWCC 3 cut(s) 331, 373, 786
AxyI CCTNAGG 1 cut(s) 768
BaeGI GKGCMC 1 cut(s) 1170
Bbv12I GWGCWC 1 cut(s) 1170
BbvI GCAGC 1 cut(s) 367
BccI CCATC 2 cut(s) 731, 1024
BceAI ACGGC 4 cut(s) 187, 440, 562, 636
BcgI CGANNNNNNTGC 2 cut(s) 1190, 1224
BciT130I CCWGG 1 cut(s) 452
BcnI CCSGG 2 cut(s) 461, 884
BcoDI GTCTC 4 cut(s) 44, 473, 986, 1382
BcuI ACTAGT 1 cut(s) 851
BfaI CTAG 1 cut(s) 852
BfoI RGCGCY 1 cut(s) 1116
BfrI CTTAAG 1 cut(s) 1502
BglI GCCNNNNNGGC 1 cut(s) 461
BisI GCNGC 5 cut(s) 356, 399, 424, 564, 1059
BlsI GCNGC 5 cut(s) 357, 400, 425, 565, 1060
Bme1390I CCNGG 3 cut(s) 452, 461, 884
Bme18I GGWCC 3 cut(s) 331, 373, 786
BmgBI CACGTC 1 cut(s) 847
BmgT120I GGNCC 5 cut(s) 331, 373, 462, 786, 1262
BmiI GGNNCC 1 cut(s) 1263
BmrFI CCNGG 3 cut(s) 452, 461, 884
BmrI ACTGGG 1 cut(s) 892
BmsI GCATC 1 cut(s) 183
BmuI ACTGGG 1 cut(s) 892
BoxI GACNNNNGTC 1 cut(s) 485
BpmI CTGGAG 1 cut(s) 146
BpuEI CTTGAG 3 cut(s) 203, 697, 1022
BpuMI CCSGG 2 cut(s) 461, 884
BsaAI YACGTR 1 cut(s) 1065
BsaHI GRCGYC 2 cut(s) 96, 345
BsaI GGTCTC 1 cut(s) 473
BsaJI CCNNGG 4 cut(s) 147, 169, 327, 951
Bsc4I CCNNNNNNNGG 2 cut(s) 148, 370
Bse118I RCCGGY 1 cut(s) 54
Bse1I ACTGG 4 cut(s) 108, 337, 898, 1333
Bse21I CCTNAGG 1 cut(s) 768
BseBI CCWGG 1 cut(s) 452
BseDI CCNNGG 4 cut(s) 147, 169, 327, 951
BseGI GGATG 7 cut(s) 114, 360, 411, 417, 742, 1197, 1243
BseLI CCNNNNNNNGG 2 cut(s) 148, 370
BseMII CTCAG 2 cut(s) 782, 1385
BseNI ACTGG 4 cut(s) 108, 337, 898, 1333
BseRI GAGGAG 7 cut(s) 10, 13, 52, 110, 185, 200, 299
BseSI GKGCMC 1 cut(s) 1170
BseX3I CGGCCG 1 cut(s) 649
BseXI GCAGC 1 cut(s) 367
Bsh1236I CGCG 1 cut(s) 563
Bsh1285I CGRYCG 1 cut(s) 652
BshFI GGCC 6 cut(s) 441, 455, 464, 602, 651, 1264
BsiEI CGRYCG 1 cut(s) 652
BsiHKAI GWGCWC 1 cut(s) 1170
BsiSI CCGG 5 cut(s) 55, 438, 460, 842, 883
BslFI GGGAC 2 cut(s) 930, 1035
BslI CCNNNNNNNGG 2 cut(s) 148, 370
BsmAI GTCTC 4 cut(s) 44, 473, 986, 1382
BsmBI CGTCTC 2 cut(s) 44, 1382
BsmFI GGGAC 2 cut(s) 930, 1035
BsnI GGCC 6 cut(s) 441, 455, 464, 602, 651, 1264
Bso31I GGTCTC 1 cut(s) 473
Bsp1286I GDGCHC 1 cut(s) 1170
Bsp1407I TGTACA 1 cut(s) 615
Bsp143I GATC 4 cut(s) 645, 687, 861, 1478
Bsp19I CCATGG 1 cut(s) 147
BspANI GGCC 6 cut(s) 441, 455, 464, 602, 651, 1264
BspCNI CTCAG 2 cut(s) 781, 1384
BspFNI CGCG 1 cut(s) 563
BspLI GGNNCC 1 cut(s) 1263
BspPI GGATC 2 cut(s) 856, 1486
BspTI CTTAAG 1 cut(s) 1502
BspTNI GGTCTC 1 cut(s) 473
BsrBI CCGCTC 1 cut(s) 1254
BsrFI RCCGGY 1 cut(s) 54
BsrGI TGTACA 1 cut(s) 615
BsrI ACTGG 4 cut(s) 108, 337, 898, 1333
BssAI RCCGGY 1 cut(s) 54
BssECI CCNNGG 4 cut(s) 147, 169, 327, 951
BssMI GATC 4 cut(s) 645, 687, 861, 1478
BssNAI GTATAC 1 cut(s) 1281
BssNI GRCGYC 2 cut(s) 96, 345
BssT1I CCWWGG 2 cut(s) 147, 327
Bst1107I GTATAC 1 cut(s) 1281
Bst2UI CCWGG 1 cut(s) 452
Bst4CI ACNGT 4 cut(s) 9, 622, 952, 1413
Bst6I CTCTTC 3 cut(s) 33, 254, 1455
BstACI GRCGYC 2 cut(s) 96, 345
BstAFI CTTAAG 1 cut(s) 1502
BstAUI TGTACA 1 cut(s) 615
BstBAI YACGTR 1 cut(s) 1065
BstC8I GCNNGC 2 cut(s) 52, 1330
BstDEI CTNAG 2 cut(s) 768, 1371
BstDSI CCRYGG 3 cut(s) 147, 169, 951
BstF5I GGATG 7 cut(s) 114, 360, 411, 417, 742, 1197, 1243
BstFNI CGCG 1 cut(s) 563
BstH2I RGCGCY 1 cut(s) 1116
BstHHI GCGC 3 cut(s) 889, 1115, 1159
BstKTI GATC 4 cut(s) 648, 690, 864, 1481
BstMAI GTCTC 4 cut(s) 44, 473, 986, 1382
BstMBI GATC 4 cut(s) 645, 687, 861, 1478
BstMCI CGRYCG 1 cut(s) 652
BstMWI GCNNNNNNNGC 4 cut(s) 447, 461, 913, 1165
BstNI CCWGG 1 cut(s) 452
BstPAI GACNNNNGTC 1 cut(s) 485
BstSCI CCNGG 3 cut(s) 450, 459, 882
BstSLI GKGCMC 1 cut(s) 1170
BstSNI TACGTA 1 cut(s) 1065
BstUI CGCG 1 cut(s) 563
BstV1I GCAGC 1 cut(s) 367
BstZ17I GTATAC 1 cut(s) 1281
BstZI CGGCCG 1 cut(s) 649
Bsu36I CCTNAGG 1 cut(s) 768
BsuRI GGCC 6 cut(s) 441, 455, 464, 602, 651, 1264
BtgI CCRYGG 3 cut(s) 147, 169, 951
BtgZI GCGATG 1 cut(s) 415
BtrI CACGTC 1 cut(s) 847
BtsCI GGATG 7 cut(s) 114, 360, 411, 417, 742, 1197, 1243
BtsIMutI CAGTG 3 cut(s) 14, 618, 800
Cac8I GCNNGC 2 cut(s) 52, 1330
CfoI GCGC 3 cut(s) 889, 1115, 1159
Cfr10I RCCGGY 1 cut(s) 54
Cfr13I GGNCC 5 cut(s) 331, 373, 462, 786, 1262
CseI GACGC 2 cut(s) 104, 1399
Csp6I GTAC 4 cut(s) 340, 616, 961, 1087
CviAII CATG 5 cut(s) 148, 590, 872, 1243, 1295
CviQI GTAC 4 cut(s) 340, 616, 961, 1087
DdeI CTNAG 2 cut(s) 768, 1371
DpnI GATC 4 cut(s) 647, 689, 863, 1480
DpnII GATC 4 cut(s) 645, 687, 861, 1478
EaeI YGGCCR 2 cut(s) 600, 649
EagI CGGCCG 1 cut(s) 649
Eam1104I CTCTTC 3 cut(s) 33, 254, 1455
EarI CTCTTC 3 cut(s) 33, 254, 1455
EciI GGCGGA 4 cut(s) 203, 323, 410, 680
EclXI CGGCCG 1 cut(s) 649
Eco105I TACGTA 1 cut(s) 1065
Eco130I CCWWGG 2 cut(s) 147, 327
Eco31I GGTCTC 1 cut(s) 473
Eco47I GGWCC 3 cut(s) 331, 373, 786
Eco47III AGCGCT 1 cut(s) 1114
Eco52I CGGCCG 1 cut(s) 649
Eco57I CTGAAG 4 cut(s) 588, 824, 938, 951
Eco81I CCTNAGG 1 cut(s) 768
EcoRII CCWGG 1 cut(s) 450
EcoT14I CCWWGG 2 cut(s) 147, 327
ErhI CCWWGG 2 cut(s) 147, 327
Esp3I CGTCTC 2 cut(s) 44, 1382
FaeI CATG 5 cut(s) 151, 593, 875, 1246, 1298
FaqI GGGAC 2 cut(s) 930, 1035
FatI CATG 5 cut(s) 147, 589, 871, 1242, 1294
FauI CCCGC 5 cut(s) 288, 455, 503, 1247, 1252
FblI GTMKAC 1 cut(s) 1280
Fnu4HI GCNGC 5 cut(s) 356, 399, 424, 564, 1059
FokI GGATG 7 cut(s) 101, 347, 398, 404, 749, 1204, 1250
Fsp4HI GCNGC 5 cut(s) 356, 399, 424, 564, 1059
FspBI CTAG 1 cut(s) 852
GlaI GCGC 3 cut(s) 888, 1114, 1158
GluI GCNGC 5 cut(s) 356, 399, 424, 564, 1059
GsuI CTGGAG 1 cut(s) 146
HaeII RGCGCY 1 cut(s) 1116
HaeIII GGCC 6 cut(s) 441, 455, 464, 602, 651, 1264
HapII CCGG 5 cut(s) 55, 438, 460, 842, 883
HgaI GACGC 2 cut(s) 104, 1399
HhaI GCGC 3 cut(s) 889, 1115, 1159
Hin1I GRCGYC 2 cut(s) 96, 345
Hin1II CATG 5 cut(s) 151, 593, 875, 1246, 1298
Hin6I GCGC 3 cut(s) 887, 1113, 1157
HinP1I GCGC 3 cut(s) 887, 1113, 1157
HinfI GANTC 6 cut(s) 152, 1103, 1207, 1274, 1291, 1463
HpaII CCGG 5 cut(s) 55, 438, 460, 842, 883
HphI GGTGA 6 cut(s) 280, 379, 436, 1037, 1045, 1490
Hpy166II GTNNAC 5 cut(s) 618, 631, 963, 1168, 1281
Hpy188I TCNGA 4 cut(s) 1108, 1374, 1417, 1483
Hpy188III TCNNGA 5 cut(s) 478, 490, 676, 734, 770
Hpy8I GTNNAC 5 cut(s) 618, 631, 963, 1168, 1281
Hpy99I CGWCG 5 cut(s) 98, 326, 347, 350, 473
HpyCH4III ACNGT 4 cut(s) 9, 622, 952, 1413
HpyCH4IV ACGT 5 cut(s) 345, 552, 846, 959, 1064
HpyCH4V TGCA 4 cut(s) 763, 800, 1168, 1201
HpyF10VI GCNNNNNNNGC 4 cut(s) 447, 461, 913, 1165
HpyF3I CTNAG 2 cut(s) 768, 1371
HpySE526I ACGT 5 cut(s) 345, 552, 846, 959, 1064
Hsp92I GRCGYC 2 cut(s) 96, 345
Hsp92II CATG 5 cut(s) 151, 593, 875, 1246, 1298
HspAI GCGC 3 cut(s) 887, 1113, 1157
Kzo9I GATC 4 cut(s) 645, 687, 861, 1478
LmnI GCTCC 1 cut(s) 171
Lsp1109I GCAGC 1 cut(s) 367
LweI GCATC 1 cut(s) 183
MaeI CTAG 1 cut(s) 852
MaeII ACGT 5 cut(s) 345, 552, 846, 959, 1064
MaeIII GTNAC 4 cut(s) 715, 847, 1378, 1468
MalI GATC 4 cut(s) 647, 689, 863, 1480
MbiI CCGCTC 1 cut(s) 1254
MboI GATC 4 cut(s) 645, 687, 861, 1478
MhlI GDGCHC 1 cut(s) 1170
MluCI AATT 3 cut(s) 226, 1069, 1492
MlyI GAGTC 3 cut(s) 161, 1097, 1472
MroXI GAANNNNTTC 1 cut(s) 809
MseI TTAA 3 cut(s) 555, 1406, 1503
MslI CAYNNNNRTG 1 cut(s) 594
MspCI CTTAAG 1 cut(s) 1502
MspI CCGG 5 cut(s) 55, 438, 460, 842, 883
MspR9I CCNGG 3 cut(s) 452, 461, 884
MvaI CCWGG 1 cut(s) 452
MvnI CGCG 1 cut(s) 563
MwoI GCNNNNNNNGC 4 cut(s) 447, 461, 913, 1165
NciI CCSGG 2 cut(s) 461, 884
NcoI CCATGG 1 cut(s) 147
NdeII GATC 4 cut(s) 645, 687, 861, 1478
NlaIII CATG 5 cut(s) 151, 593, 875, 1246, 1298
NlaIV GGNNCC 1 cut(s) 1263
NmeAIII GCCGAG 1 cut(s) 1185
NmuCI GTSAC 1 cut(s) 847
PcsI WCGNNNNNNNCGW 3 cut(s) 474, 483, 654
PdmI GAANNNNTTC 1 cut(s) 809
PfeI GAWTC 3 cut(s) 1207, 1274, 1291
PflFI GACNNNGTC 1 cut(s) 320
PflMI CCANNNNNTGG 1 cut(s) 148
PkrI GCNGC 5 cut(s) 357, 400, 425, 565, 1060
PleI GAGTC 3 cut(s) 160, 1097, 1471
PpsI GAGTC 3 cut(s) 160, 1097, 1471
Ppu21I YACGTR 1 cut(s) 1065
PshAI GACNNNNGTC 1 cut(s) 485
PsiI TTATAA 1 cut(s) 1176
Psp6I CCWGG 1 cut(s) 450
PspGI CCWGG 1 cut(s) 450
PspN4I GGNNCC 1 cut(s) 1263
PspPI GGNCC 5 cut(s) 331, 373, 462, 786, 1262
PsyI GACNNNGTC 1 cut(s) 320
RsaI GTAC 4 cut(s) 341, 617, 962, 1088
RsaNI GTAC 4 cut(s) 340, 616, 961, 1087
RseI CAYNNNNRTG 1 cut(s) 594
SaqAI TTAA 3 cut(s) 555, 1406, 1503
SatI GCNGC 5 cut(s) 356, 399, 424, 564, 1059
Sau3AI GATC 4 cut(s) 645, 687, 861, 1478
Sau96I GGNCC 5 cut(s) 331, 373, 462, 786, 1262
SchI GAGTC 3 cut(s) 161, 1097, 1472
ScrFI CCNGG 3 cut(s) 452, 461, 884
SduI GDGCHC 1 cut(s) 1170
SfaNI GCATC 1 cut(s) 183
SfiI GGCCNNNNNGGCC 1 cut(s) 461
SinI GGWCC 3 cut(s) 331, 373, 786
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 4 cut(s) 218, 676, 1001, 1502
SmoI CTYRAG 4 cut(s) 218, 676, 1001, 1502
SnaBI TACGTA 1 cut(s) 1065
SpeI ACTAGT 1 cut(s) 851
Sse9I AATT 3 cut(s) 226, 1069, 1492
SspMI CTAG 1 cut(s) 852
StyD4I CCNGG 3 cut(s) 450, 459, 882
StyI CCWWGG 2 cut(s) 147, 327
TaaI ACNGT 4 cut(s) 9, 622, 952, 1413
TaiI ACGT 5 cut(s) 348, 555, 849, 962, 1067
TasI AATT 3 cut(s) 226, 1069, 1492
TatI WGTACW 2 cut(s) 615, 1086
TauI GCSGC 4 cut(s) 401, 426, 566, 1061
TfiI GAWTC 3 cut(s) 1207, 1274, 1291
Tru1I TTAA 3 cut(s) 555, 1406, 1503
Tru9I TTAA 3 cut(s) 555, 1406, 1503
TscAI CASTG 3 cut(s) 14, 625, 807
TseFI GTSAC 1 cut(s) 847
TseI GCWGC 1 cut(s) 355
Tsp45I GTSAC 1 cut(s) 847
TspDTI ATGAA 6 cut(s) 831, 860, 1151, 1259, 1283, 1473
TspGWI ACGGA 2 cut(s) 26, 32
TspRI CASTG 3 cut(s) 14, 625, 807
Tth111I GACNNNGTC 1 cut(s) 320
Van91I CCANNNNNTGG 1 cut(s) 148
Vha464I CTTAAG 1 cut(s) 1502
VneI GTGCAC 1 cut(s) 1166
VpaK11BI GGWCC 3 cut(s) 331, 373, 786
XmiI GTMKAC 1 cut(s) 1280
XmnI GAANNNNTTC 1 cut(s) 809
XspI CTAG 1 cut(s) 852
ZraI GACGTC 1 cut(s) 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.