Rh3AG252800

Pentatricopeptide repeat-containing protein At2g13420, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0006370
Physical Location & Seq
Forward (+)
27375196 .. 27394359
19164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG252800.1

Sequence Viewer

Length: 1674 bp
ATGGAGTCCTCTCTCCAGCTCCACGGCATCACTCTCTCCCCCGACCTCCTCCACCACACTCTCCTCCGCCTCAAGCACAATTCCAAAATCGCCCTCGCCCTCTTCCACTACGCCAAGTCCCTCCCCTCCCCCCCGCCCCTCACCTCCCACGCCTTCCACCTCCTCATCGACATCGTCGCCAAGGTCCGCCAGTACGACGTCGCTTGGCAGCTCATCCTCGAAATGGACCGCCACAACCTCACCCCCACCGCCGCCACCTTCCTCATCCTCATCCGCCGCCTCATCGCCTCCGGCCTCACCCGCCAGGCCGTCCGGGCCTTCGACGACATCGAGACCTTCGTCCTGACCCGCCCCACCGCCCAAGACTTCTGCTTCTTACTCGACACCCTCTGTAAATACGGCTACGTAAAGCTCGCGGCTGAAGTTTTCAACAAAAGGAAGCATGACTATGTGGCCGATGTGAAAATGTACACTGTTCTGGTTTACGGGTGGTGTAAGATCGGCCGTTTCGATATGGCGGAGAGGTTCTTGAGGGATATGATCGAGCGTGGTATTGAGCCCAATGTGGTTACTTACAATGTGTTTCTGGATGGGATTTGTAGGAAGGCGAGTTTGCACCCTCAGGACAGGTTTGAGAGGACCATAAGAAATGCACTGAAGGTGTTTGATGAAATGTCCAGCAGAGGCATTGAGCCGGACGTGACTAGTTTTTCGATCCTTCTTCATGTTTATAGCCGGGCGCATAAGCCCCAGTTGTCGCTTGATAAGCTCAAGGAAATGAGGGAGAGGGGGATTTGCCCCACCGTGGCGACTTACACTTCAGTTGTTAAGTGTCTTTGCTCTTGCGGGAGGCTTGAGGAAGCGGAGGATTTGCTTGGTGAGATGGTGAGGGATGGGGTTAGTCCCTCTGCGGCTACGTATAATTGTTTCTTCAAAGAATACAGGGGGAGAAAGGACTCGGAAAGTGCTTTGAAGTTGTATAGGAAGATGAAGGAGGATAGATTGTTTGCGCCGAGTGTGCACACTTATAATATTTTGGTGGGGATGTTTTTGCAGTTGAATCGAGTGGAGATTGTGAGAGAGATATGGGATGACATGAAAGAGAGCGGGGCGGGGCCGGATTTGGATTCGTATACGATGTTGATTCATGGGCTATGTGAGAAGCAGAAGTGGAGAGAGGCGTGCCAGTTTTTTGTGGAGATGATAGAGAAGGGGCTTCTTCCTCAGAAAGTTACTTTTGAGACACTCTACAGAGGGATGTGTTGTATTTCTTGCTTATGTTTTGAGTGGATTATAGAATCTGTTGTCAAGTTACTTGCTGCTTCTATGGTTCACATAAAGGAAAACATTAACGATAACCTTCTTGCTTCAGACCATAACAGAGATCTGGAAAGTCATGACAAGTTGTCTGAGGATCATCTTCAAAAGAAGTTACCTGAGGATGGATCAGTTGTGATCTTGGACCCTGCAAAGCTCGAAAAGAATGGAAGTTATTCATTTGAACAGAGTGGTTGGTCCAACTACTACCCAAGTCCCACAAGCGCTGCCTATCTGAAGCAAGTGTTAGAAACAATTAGTAGAACACCAGCAACCAACAACTCCCGAGTCTCGTCCGAAGGCTTCTCGAAGTCCAAGGATGGCTACCTATCAGAAGCCAAGGTTAAAAACAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PPR_3

Protein Analysis

557

Amino Acids

63.74

Weight (kDa)

7.84

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 51 - 94 9.6e-06 PPR repeat family
PPR_3 PF13812 152 - 197 9.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 153 - 201 9.6e-14 PPR repeat family
PPR_long PF17177 180 - 308 2.6e-10 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 215 - 244 6.2e-07 PPR repeat family
TPR_24 PF23276 218 - 330 2e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 220 - 277 9.1e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 239 - 280 1.1e-06 PPR repeat family
PPR_1 PF12854 263 - 296 1.3e-10 PPR repeat
PPR PF01535 271 - 300 4.9e-08 PPR repeat
PPR_2 PF13041 274 - 313 1.4e-08 PPR repeat family
PPR_3 PF13812 291 - 350 2.1e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 306 - 350 1.7e-07 PPR repeat family
PPR_2 PF13041 338 - 386 1.1e-11 PPR repeat family
PPR_2 PF13041 373 - 421 4.1e-11 PPR repeat family
PPR_1 PF12854 373 - 401 8e-07 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1029
AatII GACGTC 1 cut(s) 201
AccBSI CCGCTC 1 cut(s) 1107
AccI GTMKAC 1 cut(s) 1133
AccII CGCG 1 cut(s) 416
AclWI GGATC 3 cut(s) 709, 1422, 1453
AcoI YGGCCR 2 cut(s) 453, 502
AcuI CTGAAG 5 cut(s) 441, 677, 804, 1353, 1574
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 2 cut(s) 194, 470
AfeI AGCGCT 1 cut(s) 1543
AfiI CCNNNNNNNGG 3 cut(s) 223, 805, 1442
AgsI TTSAA 6 cut(s) 430, 934, 973, 1060, 1424, 1502
AhdI GACNNNNNGTC 1 cut(s) 1405
AhlI ACTAGT 1 cut(s) 704
AjiI CACGTC 1 cut(s) 700
AjnI CCWGG 1 cut(s) 303
AluBI AGCT 5 cut(s) 19, 211, 412, 769, 1474
AluI AGCT 5 cut(s) 19, 211, 412, 769, 1474
Alw21I GWGCWC 1 cut(s) 1023
Alw26I GTCTC 3 cut(s) 326, 1235, 1612
Alw44I GTGCAC 1 cut(s) 1019
AlwI GGATC 3 cut(s) 709, 1422, 1453
Ama87I CYCGRG 1 cut(s) 1602
Aor51HI AGCGCT 1 cut(s) 1543
AoxI GGCC 6 cut(s) 292, 306, 315, 453, 502, 1115
ApaLI GTGCAC 1 cut(s) 1019
ApeKI GCWGC 3 cut(s) 208, 1319, 1544
ArsI GACNNNNNNTTYG 2 cut(s) 694, 726
Asp700I GAANNNNTTC 1 cut(s) 1492
AspLEI GCGC 3 cut(s) 742, 1012, 1544
AspS9I GGNCC 7 cut(s) 184, 226, 315, 639, 1115, 1462, 1515
AsuC2I CCSGG 2 cut(s) 314, 737
AsuHPI GGTGA 5 cut(s) 133, 232, 289, 890, 898
AvaI CYCGRG 1 cut(s) 1602
AvaII GGWCC 5 cut(s) 184, 226, 639, 1462, 1515
AxyI CCTNAGG 2 cut(s) 621, 1437
BaeGI GKGCMC 1 cut(s) 1023
BanII GRGCYC 1 cut(s) 561
Bbv12I GWGCWC 1 cut(s) 1023
BbvI GCAGC 3 cut(s) 220, 1306, 1531
BccI CCATC 5 cut(s) 584, 877, 887, 1436, 1631
BceAI ACGGC 4 cut(s) 40, 293, 415, 489
BcgI CGANNNNNNTGC 2 cut(s) 1043, 1077
BciT130I CCWGG 1 cut(s) 305
BcnI CCSGG 2 cut(s) 314, 737
BcoDI GTCTC 3 cut(s) 326, 1235, 1612
BcuI ACTAGT 1 cut(s) 704
BfaI CTAG 1 cut(s) 705
BfmI CTRYAG 1 cut(s) 1249
BfoI RGCGCY 1 cut(s) 1545
BglI GCCNNNNNGGC 1 cut(s) 314
BglII AGATCT 1 cut(s) 1384
BisI GCNGC 7 cut(s) 209, 252, 277, 417, 912, 1320, 1545
BlsI GCNGC 7 cut(s) 210, 253, 278, 418, 913, 1321, 1546
Bme1390I CCNGG 3 cut(s) 305, 314, 737
Bme18I GGWCC 5 cut(s) 184, 226, 639, 1462, 1515
BmeRI GACNNNNNGTC 1 cut(s) 1405
BmeT110I CYCGRG 1 cut(s) 1602
BmgBI CACGTC 1 cut(s) 700
BmgT120I GGNCC 7 cut(s) 184, 226, 315, 639, 1115, 1462, 1515
BmiI GGNNCC 2 cut(s) 1116, 1464
BmrFI CCNGG 3 cut(s) 305, 314, 737
BmrI ACTGGG 1 cut(s) 745
BmsI GCATC 1 cut(s) 36
BmuI ACTGGG 1 cut(s) 745
BoxI GACNNNNGTC 1 cut(s) 338
BpuEI CTTGAG 4 cut(s) 56, 550, 755, 875
BpuMI CCSGG 2 cut(s) 314, 737
BsaAI YACGTR 2 cut(s) 406, 918
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 5 cut(s) 22, 180, 804, 1632, 1656
Bsc4I CCNNNNNNNGG 3 cut(s) 223, 805, 1442
Bse1I ACTGG 3 cut(s) 190, 751, 1186
Bse21I CCTNAGG 2 cut(s) 621, 1437
BseBI CCWGG 1 cut(s) 305
BseDI CCNNGG 5 cut(s) 22, 180, 804, 1632, 1656
BseLI CCNNNNNNNGG 3 cut(s) 223, 805, 1442
BseMII CTCAG 4 cut(s) 635, 1238, 1401, 1428
BseNI ACTGG 3 cut(s) 190, 751, 1186
BseRI GAGGAG 3 cut(s) 38, 53, 152
BseSI GKGCMC 1 cut(s) 1023
BseX3I CGGCCG 1 cut(s) 502
BseXI GCAGC 3 cut(s) 220, 1306, 1531
Bsh1236I CGCG 1 cut(s) 416
Bsh1285I CGRYCG 1 cut(s) 505
BshFI GGCC 6 cut(s) 294, 308, 317, 455, 504, 1117
BsiEI CGRYCG 1 cut(s) 505
BsiHKAI GWGCWC 1 cut(s) 1023
BsiHKCI CYCGRG 1 cut(s) 1602
BsiSI CCGG 5 cut(s) 291, 313, 695, 736, 1118
BslFI GGGAC 3 cut(s) 103, 888, 1518
BslI CCNNNNNNNGG 3 cut(s) 223, 805, 1442
BsmAI GTCTC 3 cut(s) 326, 1235, 1612
BsmFI GGGAC 3 cut(s) 103, 888, 1518
BsnI GGCC 6 cut(s) 294, 308, 317, 455, 504, 1117
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 1602
Bsp1286I GDGCHC 2 cut(s) 561, 1023
Bsp1407I TGTACA 1 cut(s) 468
Bsp143I GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
BspANI GGCC 6 cut(s) 294, 308, 317, 455, 504, 1117
BspCNI CTCAG 4 cut(s) 634, 1237, 1402, 1429
BspFNI CGCG 1 cut(s) 416
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 2 cut(s) 1116, 1464
BspPI GGATC 3 cut(s) 709, 1422, 1453
BspTNI GGTCTC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 1107
BsrGI TGTACA 1 cut(s) 468
BsrI ACTGG 3 cut(s) 190, 751, 1186
BssECI CCNNGG 5 cut(s) 22, 180, 804, 1632, 1656
BssMI GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
BssNAI GTATAC 1 cut(s) 1134
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 3 cut(s) 180, 1632, 1656
Bst1107I GTATAC 1 cut(s) 1134
Bst2UI CCWGG 1 cut(s) 305
Bst4CI ACNGT 2 cut(s) 475, 805
Bst6I CTCTTC 1 cut(s) 107
BstACI GRCGYC 1 cut(s) 198
BstAUI TGTACA 1 cut(s) 468
BstBAI YACGTR 2 cut(s) 406, 918
BstC8I GCNNGC 2 cut(s) 414, 1183
BstDEI CTNAG 4 cut(s) 621, 1224, 1410, 1437
BstDSI CCRYGG 2 cut(s) 22, 804
BstFNI CGCG 1 cut(s) 416
BstH2I RGCGCY 1 cut(s) 1545
BstHHI GCGC 3 cut(s) 742, 1012, 1544
BstKTI GATC 7 cut(s) 501, 543, 717, 1387, 1417, 1448, 1458
BstMAI GTCTC 3 cut(s) 326, 1235, 1612
BstMBI GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
BstMCI CGRYCG 1 cut(s) 505
BstMWI GCNNNNNNNGC 4 cut(s) 300, 314, 766, 1018
BstNI CCWGG 1 cut(s) 305
BstPAI GACNNNNGTC 1 cut(s) 338
BstSCI CCNGG 3 cut(s) 303, 312, 735
BstSFI CTRYAG 1 cut(s) 1249
BstSLI GKGCMC 1 cut(s) 1023
BstSNI TACGTA 2 cut(s) 406, 918
BstUI CGCG 1 cut(s) 416
BstV1I GCAGC 3 cut(s) 220, 1306, 1531
BstX2I RGATCY 1 cut(s) 1384
BstYI RGATCY 1 cut(s) 1384
BstZ17I GTATAC 1 cut(s) 1134
BstZI CGGCCG 1 cut(s) 502
Bsu36I CCTNAGG 2 cut(s) 621, 1437
BsuRI GGCC 6 cut(s) 294, 308, 317, 455, 504, 1117
BtgI CCRYGG 2 cut(s) 22, 804
BtgZI GCGATG 1 cut(s) 268
BtrI CACGTC 1 cut(s) 700
BtsIMutI CAGTG 2 cut(s) 471, 653
Cac8I GCNNGC 2 cut(s) 414, 1183
CciI TCATGA 1 cut(s) 1396
CfoI GCGC 3 cut(s) 742, 1012, 1544
Cfr13I GGNCC 7 cut(s) 184, 226, 315, 639, 1115, 1462, 1515
Csp6I GTAC 2 cut(s) 193, 469
CviAII CATG 5 cut(s) 443, 725, 1096, 1148, 1397
CviQI GTAC 2 cut(s) 193, 469
DdeI CTNAG 4 cut(s) 621, 1224, 1410, 1437
DpnI GATC 7 cut(s) 500, 542, 716, 1386, 1416, 1447, 1457
DpnII GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
DriI GACNNNNNGTC 1 cut(s) 1405
EaeI YGGCCR 2 cut(s) 453, 502
EagI CGGCCG 1 cut(s) 502
Eam1104I CTCTTC 1 cut(s) 107
Eam1105I GACNNNNNGTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 107
EciI GGCGGA 4 cut(s) 56, 176, 263, 533
EclXI CGGCCG 1 cut(s) 502
Eco105I TACGTA 2 cut(s) 406, 918
Eco130I CCWWGG 3 cut(s) 180, 1632, 1656
Eco24I GRGCYC 1 cut(s) 561
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 5 cut(s) 184, 226, 639, 1462, 1515
Eco47III AGCGCT 1 cut(s) 1543
Eco52I CGGCCG 1 cut(s) 502
Eco57I CTGAAG 5 cut(s) 441, 677, 804, 1353, 1574
Eco81I CCTNAGG 2 cut(s) 621, 1437
Eco88I CYCGRG 1 cut(s) 1602
EcoRII CCWGG 1 cut(s) 303
EcoT14I CCWWGG 3 cut(s) 180, 1632, 1656
EcoT38I GRGCYC 1 cut(s) 561
ErhI CCWWGG 3 cut(s) 180, 1632, 1656
FaeI CATG 5 cut(s) 446, 728, 1099, 1151, 1400
FaqI GGGAC 3 cut(s) 103, 888, 1518
FatI CATG 5 cut(s) 442, 724, 1095, 1147, 1396
FauI CCCGC 6 cut(s) 141, 308, 356, 839, 1100, 1105
FblI GTMKAC 1 cut(s) 1133
Fnu4HI GCNGC 7 cut(s) 209, 252, 277, 417, 912, 1320, 1545
FriOI GRGCYC 1 cut(s) 561
Fsp4HI GCNGC 7 cut(s) 209, 252, 277, 417, 912, 1320, 1545
FspBI CTAG 1 cut(s) 705
GlaI GCGC 3 cut(s) 741, 1011, 1543
GluI GCNGC 7 cut(s) 209, 252, 277, 417, 912, 1320, 1545
HaeII RGCGCY 1 cut(s) 1545
HaeIII GGCC 6 cut(s) 294, 308, 317, 455, 504, 1117
HapII CCGG 5 cut(s) 291, 313, 695, 736, 1118
HhaI GCGC 3 cut(s) 742, 1012, 1544
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 5 cut(s) 446, 728, 1099, 1151, 1400
Hin6I GCGC 3 cut(s) 740, 1010, 1542
HinP1I GCGC 3 cut(s) 740, 1010, 1542
HinfI GANTC 7 cut(s) 5, 956, 1060, 1127, 1144, 1298, 1605
HpaII CCGG 5 cut(s) 291, 313, 695, 736, 1118
HphI GGTGA 5 cut(s) 133, 232, 289, 890, 898
Hpy166II GTNNAC 5 cut(s) 471, 484, 1021, 1134, 1333
Hpy188I TCNGA 7 cut(s) 961, 1227, 1372, 1411, 1554, 1615, 1651
Hpy188III TCNNGA 9 cut(s) 331, 343, 529, 587, 623, 1388, 1397, 1602, 1624
Hpy8I GTNNAC 5 cut(s) 471, 484, 1021, 1134, 1333
Hpy99I CGWCG 4 cut(s) 179, 200, 203, 326
HpyCH4III ACNGT 2 cut(s) 475, 805
HpyCH4IV ACGT 4 cut(s) 198, 405, 699, 917
HpyCH4V TGCA 5 cut(s) 616, 653, 1021, 1054, 1469
HpyF10VI GCNNNNNNNGC 4 cut(s) 300, 314, 766, 1018
HpyF3I CTNAG 4 cut(s) 621, 1224, 1410, 1437
HpySE526I ACGT 4 cut(s) 198, 405, 699, 917
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 5 cut(s) 446, 728, 1099, 1151, 1400
HspAI GCGC 3 cut(s) 740, 1010, 1542
Kzo9I GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
LmnI GCTCC 1 cut(s) 24
Lsp1109I GCAGC 3 cut(s) 220, 1306, 1531
LweI GCATC 1 cut(s) 36
MaeI CTAG 1 cut(s) 705
MaeII ACGT 4 cut(s) 198, 405, 699, 917
MaeIII GTNAC 5 cut(s) 568, 700, 1231, 1311, 1431
MalI GATC 7 cut(s) 500, 542, 716, 1386, 1416, 1447, 1457
MbiI CCGCTC 1 cut(s) 1107
MboI GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
MboII GAAGA 6 cut(s) 94, 713, 922, 997, 1211, 1412
MflI RGATCY 1 cut(s) 1384
MhlI GDGCHC 2 cut(s) 561, 1023
MluCI AATT 3 cut(s) 79, 922, 1572
MlyI GAGTC 3 cut(s) 14, 950, 1614
MmeI TCCRAC 1 cut(s) 1542
MroXI GAANNNNTTC 1 cut(s) 1492
MseI TTAA 3 cut(s) 828, 1350, 1662
MslI CAYNNNNRTG 1 cut(s) 447
MspI CCGG 5 cut(s) 291, 313, 695, 736, 1118
MspR9I CCNGG 3 cut(s) 305, 314, 737
MvaI CCWGG 1 cut(s) 305
MvnI CGCG 1 cut(s) 416
MwoI GCNNNNNNNGC 4 cut(s) 300, 314, 766, 1018
NciI CCSGG 2 cut(s) 314, 737
NdeII GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
NlaIII CATG 5 cut(s) 446, 728, 1099, 1151, 1400
NlaIV GGNNCC 2 cut(s) 1116, 1464
NmeAIII GCCGAG 1 cut(s) 1038
NmuCI GTSAC 1 cut(s) 700
PagI TCATGA 1 cut(s) 1396
PcsI WCGNNNNNNNCGW 3 cut(s) 327, 336, 507
PdmI GAANNNNTTC 1 cut(s) 1492
PfeI GAWTC 4 cut(s) 1060, 1127, 1144, 1298
PflFI GACNNNGTC 1 cut(s) 173
PkrI GCNGC 7 cut(s) 210, 253, 278, 418, 913, 1321, 1546
PleI GAGTC 3 cut(s) 13, 950, 1613
PpsI GAGTC 3 cut(s) 13, 950, 1613
Ppu21I YACGTR 2 cut(s) 406, 918
PshAI GACNNNNGTC 1 cut(s) 338
PsiI TTATAA 1 cut(s) 1029
Psp6I CCWGG 1 cut(s) 303
PspGI CCWGG 1 cut(s) 303
PspN4I GGNNCC 2 cut(s) 1116, 1464
PspPI GGNCC 7 cut(s) 184, 226, 315, 639, 1115, 1462, 1515
PsuI RGATCY 1 cut(s) 1384
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 2 cut(s) 194, 470
RsaNI GTAC 2 cut(s) 193, 469
RseI CAYNNNNRTG 1 cut(s) 447
SaqAI TTAA 3 cut(s) 828, 1350, 1662
SatI GCNGC 7 cut(s) 209, 252, 277, 417, 912, 1320, 1545
Sau3AI GATC 7 cut(s) 498, 540, 714, 1384, 1414, 1445, 1455
Sau96I GGNCC 7 cut(s) 184, 226, 315, 639, 1115, 1462, 1515
SchI GAGTC 3 cut(s) 14, 950, 1614
ScrFI CCNGG 3 cut(s) 305, 314, 737
SduI GDGCHC 2 cut(s) 561, 1023
SfaNI GCATC 1 cut(s) 36
SfcI CTRYAG 1 cut(s) 1249
SfiI GGCCNNNNNGGCC 1 cut(s) 314
SinI GGWCC 5 cut(s) 184, 226, 639, 1462, 1515
SmiMI CAYNNNNRTG 1 cut(s) 447
SmlI CTYRAG 4 cut(s) 71, 529, 770, 854
SmoI CTYRAG 4 cut(s) 71, 529, 770, 854
SnaBI TACGTA 2 cut(s) 406, 918
SpeI ACTAGT 1 cut(s) 704
Sse9I AATT 3 cut(s) 79, 922, 1572
SspI AATATT 1 cut(s) 1033
SspMI CTAG 1 cut(s) 705
StyD4I CCNGG 3 cut(s) 303, 312, 735
StyI CCWWGG 3 cut(s) 180, 1632, 1656
TaaI ACNGT 2 cut(s) 475, 805
TaiI ACGT 4 cut(s) 201, 408, 702, 920
TasI AATT 3 cut(s) 79, 922, 1572
TatI WGTACW 1 cut(s) 468
TauI GCSGC 4 cut(s) 254, 279, 419, 914
TfiI GAWTC 4 cut(s) 1060, 1127, 1144, 1298
Tru1I TTAA 3 cut(s) 828, 1350, 1662
Tru9I TTAA 3 cut(s) 828, 1350, 1662
TscAI CASTG 2 cut(s) 478, 660
TseFI GTSAC 1 cut(s) 700
TseI GCWGC 3 cut(s) 208, 1319, 1544
Tsp45I GTSAC 1 cut(s) 700
TspDTI ATGAA 6 cut(s) 684, 713, 1004, 1112, 1136, 1485
TspRI CASTG 2 cut(s) 478, 660
Tth111I GACNNNGTC 1 cut(s) 173
VneI GTGCAC 1 cut(s) 1019
VpaK11BI GGWCC 5 cut(s) 184, 226, 639, 1462, 1515
XmiI GTMKAC 1 cut(s) 1133
XmnI GAANNNNTTC 1 cut(s) 1492
XspI CTAG 1 cut(s) 705
ZraI GACGTC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.