RING-H2 finger protein ATL47-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g07270 FvH4_5g07270 FvH4_5g07270 |
| malus_domestica | MD06G1157700.v1.1 MD14G1164300.v1.1 |
| prunus_persica | Prupe.5G157700_v2.0.a1 Prupe.5G157700_v2.0.a1 Prupe.5G157700_v2.0.a1 |
| pyrus_communis | pycom06g14080 pycom14g13700 |
| rosa_chinensis | RchiOBHm_Chr3g0493731 RchiOBHm_Chr7g0191361 |
| rosa_laevigata | RLG00000004462 |
| rosa_multiflora | Rmu_sc0004860.1_g000001 |
| rosa_roxburghii | Rroxscaffold_157G00438310 Rroxscaffold_3G00263890 |
| rosa_rugosa | Rorug06G0510200 |
| rosa_samantha | Rh5AG177300 Rh7AG117700 Rh7BG119600 Rh7CG122600 Rh7CG210800 Rh7DG120700 |
| rosa_wichuraiana | Rw5G016070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 25 |
| AcuI | CTGAAG | 1 cut(s) | 152 |
| AfaI | GTAC | 1 cut(s) | 84 |
| AgsI | TTSAA | 1 cut(s) | 50 |
| AluBI | AGCT | 2 cut(s) | 128, 262 |
| AluI | AGCT | 2 cut(s) | 128, 262 |
| Alw26I | GTCTC | 1 cut(s) | 179 |
| ApeKI | GCWGC | 1 cut(s) | 342 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 95, 127 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 196 |
| BanI | GGYRCC | 1 cut(s) | 25 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 112, 144 |
| BbsI | GAAGAC | 1 cut(s) | 60 |
| BbvI | GCAGC | 1 cut(s) | 329 |
| BccI | CCATC | 2 cut(s) | 86, 220 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 90, 124 |
| BcoDI | GTCTC | 1 cut(s) | 179 |
| BfaI | CTAG | 1 cut(s) | 221 |
| BglII | AGATCT | 1 cut(s) | 217 |
| BisI | GCNGC | 1 cut(s) | 343 |
| BlsI | GCNGC | 1 cut(s) | 344 |
| BmiI | GGNNCC | 1 cut(s) | 27 |
| BpiI | GAAGAC | 1 cut(s) | 60 |
| BsaJI | CCNNGG | 2 cut(s) | 178, 189 |
| Bse1I | ACTGG | 1 cut(s) | 135 |
| BseDI | CCNNGG | 2 cut(s) | 178, 189 |
| BseGI | GGATG | 2 cut(s) | 199, 392 |
| BseMII | CTCAG | 2 cut(s) | 102, 159 |
| BseNI | ACTGG | 1 cut(s) | 135 |
| BseXI | GCAGC | 1 cut(s) | 329 |
| BshNI | GGYRCC | 1 cut(s) | 25 |
| BslFI | GGGAC | 1 cut(s) | 148 |
| BsmAI | GTCTC | 1 cut(s) | 179 |
| BsmBI | CGTCTC | 1 cut(s) | 179 |
| BsmFI | GGGAC | 1 cut(s) | 148 |
| Bsp143I | GATC | 1 cut(s) | 217 |
| Bsp19I | CCATGG | 1 cut(s) | 178 |
| BspCNI | CTCAG | 2 cut(s) | 101, 158 |
| BspLI | GGNNCC | 1 cut(s) | 27 |
| BspT107I | GGYRCC | 1 cut(s) | 25 |
| BsrI | ACTGG | 1 cut(s) | 135 |
| BssECI | CCNNGG | 2 cut(s) | 178, 189 |
| BssMI | GATC | 1 cut(s) | 217 |
| BssT1I | CCWWGG | 2 cut(s) | 178, 189 |
| Bst4CI | ACNGT | 2 cut(s) | 162, 380 |
| BstDEI | CTNAG | 3 cut(s) | 88, 145, 307 |
| BstDSI | CCRYGG | 1 cut(s) | 178 |
| BstF5I | GGATG | 2 cut(s) | 199, 392 |
| BstKTI | GATC | 1 cut(s) | 220 |
| BstMAI | GTCTC | 1 cut(s) | 179 |
| BstMBI | GATC | 1 cut(s) | 217 |
| BstV1I | GCAGC | 1 cut(s) | 329 |
| BstV2I | GAAGAC | 1 cut(s) | 60 |
| BstX2I | RGATCY | 1 cut(s) | 217 |
| BstYI | RGATCY | 1 cut(s) | 217 |
| BtgI | CCRYGG | 1 cut(s) | 178 |
| BtsCI | GGATG | 2 cut(s) | 199, 392 |
| CseI | GACGC | 1 cut(s) | 161 |
| Csp6I | GTAC | 1 cut(s) | 83 |
| CviAII | CATG | 4 cut(s) | 72, 179, 347, 352 |
| CviJI | RGCY | 3 cut(s) | 128, 262, 313 |
| CviKI_1 | RGCY | 3 cut(s) | 128, 262, 313 |
| CviQI | GTAC | 1 cut(s) | 83 |
| DdeI | CTNAG | 3 cut(s) | 88, 145, 307 |
| DpnI | GATC | 1 cut(s) | 219 |
| DpnII | GATC | 1 cut(s) | 217 |
| Eco130I | CCWWGG | 2 cut(s) | 178, 189 |
| Eco32I | GATATC | 1 cut(s) | 202 |
| Eco57I | CTGAAG | 1 cut(s) | 152 |
| EcoRV | GATATC | 1 cut(s) | 202 |
| EcoT14I | CCWWGG | 2 cut(s) | 178, 189 |
| ErhI | CCWWGG | 2 cut(s) | 178, 189 |
| Esp3I | CGTCTC | 1 cut(s) | 179 |
| FaeI | CATG | 4 cut(s) | 75, 182, 350, 355 |
| FaiI | YATR | 7 cut(s) | 73, 117, 155, 180, 246, 348, 353 |
| FaqI | GGGAC | 1 cut(s) | 148 |
| FatI | CATG | 4 cut(s) | 71, 178, 346, 351 |
| Fnu4HI | GCNGC | 1 cut(s) | 343 |
| FokI | GGATG | 1 cut(s) | 206 |
| Fsp4HI | GCNGC | 1 cut(s) | 343 |
| FspBI | CTAG | 1 cut(s) | 221 |
| GluI | GCNGC | 1 cut(s) | 343 |
| HgaI | GACGC | 1 cut(s) | 161 |
| Hin1II | CATG | 4 cut(s) | 75, 182, 350, 355 |
| HincII | GTYRAC | 1 cut(s) | 274 |
| HindII | GTYRAC | 1 cut(s) | 274 |
| HindIII | AAGCTT | 1 cut(s) | 260 |
| HinfI | GANTC | 1 cut(s) | 185 |
| HphI | GGTGA | 2 cut(s) | 194, 196 |
| Hpy166II | GTNNAC | 4 cut(s) | 13, 77, 274, 376 |
| Hpy188I | TCNGA | 2 cut(s) | 91, 268 |
| Hpy188III | TCNNGA | 1 cut(s) | 221 |
| Hpy8I | GTNNAC | 4 cut(s) | 13, 77, 274, 376 |
| HpyAV | CCTTC | 1 cut(s) | 176 |
| HpyCH4III | ACNGT | 2 cut(s) | 162, 380 |
| HpyCH4V | TGCA | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 3 cut(s) | 88, 145, 307 |
| Hsp92II | CATG | 4 cut(s) | 75, 182, 350, 355 |
| Kzo9I | GATC | 1 cut(s) | 217 |
| LpnPI | CCDG | 2 cut(s) | 50, 148 |
| Lsp1109I | GCAGC | 1 cut(s) | 329 |
| MaeI | CTAG | 1 cut(s) | 221 |
| MalI | GATC | 1 cut(s) | 219 |
| MboI | GATC | 1 cut(s) | 217 |
| MboII | GAAGA | 3 cut(s) | 60, 132, 227 |
| MfeI | CAATTG | 1 cut(s) | 20 |
| MflI | RGATCY | 1 cut(s) | 217 |
| MluCI | AATT | 5 cut(s) | 5, 20, 30, 140, 337 |
| MnlI | CCTC | 3 cut(s) | 90, 205, 241 |
| MslI | CAYNNNNRTG | 1 cut(s) | 323 |
| MunI | CAATTG | 1 cut(s) | 20 |
| NcoI | CCATGG | 1 cut(s) | 178 |
| NdeII | GATC | 1 cut(s) | 217 |
| NlaIII | CATG | 4 cut(s) | 75, 182, 350, 355 |
| NlaIV | GGNNCC | 1 cut(s) | 27 |
| PfeI | GAWTC | 1 cut(s) | 185 |
| PkrI | GCNGC | 1 cut(s) | 344 |
| PspN4I | GGNNCC | 1 cut(s) | 27 |
| PsuI | RGATCY | 1 cut(s) | 217 |
| RsaI | GTAC | 1 cut(s) | 84 |
| RsaNI | GTAC | 1 cut(s) | 83 |
| RseI | CAYNNNNRTG | 1 cut(s) | 323 |
| SatI | GCNGC | 1 cut(s) | 343 |
| Sau3AI | GATC | 1 cut(s) | 217 |
| SetI | ASST | 2 cut(s) | 130, 264 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 323 |
| Sse9I | AATT | 5 cut(s) | 5, 20, 30, 140, 337 |
| SspMI | CTAG | 1 cut(s) | 221 |
| StyI | CCWWGG | 2 cut(s) | 178, 189 |
| TaaI | ACNGT | 2 cut(s) | 162, 380 |
| TasI | AATT | 5 cut(s) | 5, 20, 30, 140, 337 |
| TfiI | GAWTC | 1 cut(s) | 185 |
| TseI | GCWGC | 1 cut(s) | 342 |
| TspDTI | ATGAA | 2 cut(s) | 17, 60 |
| XbaI | TCTAGA | 1 cut(s) | 220 |
| XspI | CTAG | 1 cut(s) | 221 |