Rorug06G0510200

RING-H2 finger protein ATL47-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0008136
Physical Location & Seq
Forward (+)
62485167 .. 62491597
6431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0510200.1

Sequence Viewer

Length: 1884 bp
ATGTCGTCGTCATTCATAACGGCGTCGCCCCTGCCTTTTCTGCTCCGAAGGCGCTCGAGTGGCGAAATCAGGAATTTGGCCTCGGTTTCGAGCAGCATATTGCCCGCTTTTGGAACCGTCATCGATGACGGCCACTTGCAGACCAAGAAATTTGTTGTTGCTCCCTACGATAGGAGATATCGGTGGTGGCAGACGTTCTTGGTGGTGCTGGTGGTGTACTCAGCATGGGCGTCGCCGTTCGAGTTGGCCTTCAAAAAGGTGGCAACAGGGTCTCTCATGCCGGTTGATTTGGTGGTCGATGCCTTCTTCGCCGTTGATATAGTTCTCACTTTCTTTGTGGCTTACTTGGATAAGTCAACCTACCTCCTAGTACTTGATCACAAAAAAATTGCATCCAGGTATGTTACGAGATATTACTTCGCAATGGACGTAGCCTCAACTGTACCGTTTCAATCCCTTCACAGGCTCTTCACTGGGCATACGCACAATGGCCTGGTCTTTGGCATCCTCAATCTGCTTCGTCTCTGGCGTCTCCGGCGCGTCAGTGAACTCTTTAAAAGGCTAGAGAAAGACACTCGCTTTAGTTACTTTTGGATCAGATACGTCAAACTCATATGTGTTACACTATTTGCTGTGCACTCGGCGGGTTGCTTCTACTACTGGATGGCCACCCATCACAAAACCTCAGATGATACATGGATTGGAACTGAGGTCCATGATTTTGAGCACAGAAGCATCTGGTTAGGTTACACATATGCCATATACTGGGCAACTGTCACCCTCACAACTGTTGGCTATGGTGACTTGCACGCAGTTAACTTTGGGGAGAAGGTTTTCAGCATATTCTATATGCTTTTCAACATTGGACTCTTTGCTTATTTGGTTGGAAACATGACCAATCTCGTTGTCCACAGTGCTGTCCGGACATTGTTCATGAGGGACTCCATCAATGAGATATTCAGATATGCAAGCAAGAACAGACTTCCAGAAGGCTTGAAAGAGCAAATGCTTGCCCACATGCAGCTCAAGTTCAAGACAGCAGAGTTACAGCAGGAAGAAGTTCTACAGGACCTTCCGAAAGCAATAAGATCCAGCATTGCCCACCATCTTTTCCGTAAAACCATTGATAAAACATACCTATTTAAAGGAATCTCTGAAGAGCTTACTGTCCAATTGGTCTCAGAGATGAAAGCAGAATATTTTCCACCCAAAGTCGATATTATCTTGCAAAACGAAATTCCAACAGACTTTTACATTCTAGTAGCTGGAGCTTTGGACGTGCTAATATACAAGAACGGCACAGAACAGTTCTTGTCAAATCTAGGATCTGCAGACATGGTAGGAGAGTTTGGCGTATTTTTCAATATCCCACAACCTTTTACAGTGAGAACAAAAAGGCTTTCTCAAGTTATCCGCATCAGTCATCAGTATTTCAAGCAAATGATCCAGCCACAGAATGAAGACGCAAAGATAATCATCACAAACTTTACTCAGCACTTGAAGGACTTAAAACAGGAGGTGTTACAAGAAATTCCATTTCTACCAGAATTGCTGGAAGAACTGAATACAGAGCAGGGCACGGAATCAAATGTGAGTACACATAATCATGAATCAGTGAATTACCATGGAAATCCAACTGTGGAAGGAACAAACAAAACTTGTGCTCCAGGGCCTATCACCATGAGAGTCATAATTCATGGCCATCATCCAAATGAAGGCGGCTCGAAAGGAAAACTTATTCATCTGCCGGGTTCAATAGACGACCTTCTGAGATTAGCAGAGAAAAAGTTGGAAAAAAGAGGAAGCACAGTTGTCATGGCCGACGGCTCAGCGGTTGAAGAACTGAATGCTTTGAGAGACAATGATCACTTGTTTATCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3 zf-RING_2

Protein Analysis

627

Amino Acids

71.9

Weight (kDa)

8.16

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 60 - 304 2.5e-38 Ion transport protein
Ion_trans_2 PF07885 234 - 302 1e-13 Ion channel
cNMP_binding PF00027 400 - 483 2e-13 Cyclic nucleotide-binding domain
KHA PF11834 562 - 626 8e-21 KHA, dimerisation domain of potassium ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 765
AccII CGCG 1 cut(s) 540
AccIII TCCGGA 1 cut(s) 921
AciI CCGC 5 cut(s) 105, 644, 1414, 1719, 1832
AclWI GGATC 4 cut(s) 602, 1083, 1333, 1438
AcoI YGGCCR 4 cut(s) 130, 666, 1699, 1818
AcsI RAATTY 4 cut(s) 73, 149, 1236, 1530
AcuI CTGAAG 1 cut(s) 1176
AcyI GRCGYC 3 cut(s) 23, 230, 529
AfaI GTAC 4 cut(s) 218, 372, 444, 1597
AfiI CCNNNNNNNGG 5 cut(s) 110, 171, 462, 765, 1715
AjiI CACGTC 1 cut(s) 1279
AjnI CCWGG 3 cut(s) 395, 492, 1666
AluBI AGCT 4 cut(s) 1024, 1162, 1265, 1271
AluI AGCT 4 cut(s) 1024, 1162, 1265, 1271
Alw21I GWGCWC 3 cut(s) 639, 729, 1666
Alw26I GTCTC 5 cut(s) 276, 527, 536, 1183, 1851
Alw44I GTGCAC 1 cut(s) 635
AlwI GGATC 4 cut(s) 602, 1083, 1333, 1438
Ama87I CYCGRG 1 cut(s) 55
Aor13HI TCCGGA 1 cut(s) 921
AoxI GGCC 8 cut(s) 78, 130, 246, 490, 666, 1670, 1699, 1818
ApaLI GTGCAC 1 cut(s) 635
ApeKI GCWGC 2 cut(s) 93, 1021
ApoI RAATTY 4 cut(s) 73, 149, 1236, 1530
Asp700I GAANNNNTTC 3 cut(s) 833, 1059, 1200
AspLEI GCGC 2 cut(s) 54, 540
AspS9I GGNCC 3 cut(s) 712, 1069, 1670
AsuC2I CCSGG 1 cut(s) 1749
AsuHPI GGTGA 3 cut(s) 769, 812, 1669
AvaI CYCGRG 1 cut(s) 55
AvaII GGWCC 2 cut(s) 712, 1069
BaeGI GKGCMC 2 cut(s) 639, 1580
BalI TGGCCA 2 cut(s) 668, 1701
BarI GAAGNNNNNNTAC 2 cut(s) 1047, 1079
BbsI GAAGAC 1 cut(s) 1467
Bbv12I GWGCWC 3 cut(s) 639, 729, 1666
BbvI GCAGC 2 cut(s) 105, 1033
BccI CCATC 5 cut(s) 658, 681, 953, 1113, 1710
BceAI ACGGC 6 cut(s) 36, 145, 220, 296, 1312, 1840
BcgI CGANNNNNNTGC 2 cut(s) 213, 247
BciT130I CCWGG 3 cut(s) 397, 494, 1668
BclI TGATCA 2 cut(s) 376, 1864
BcnI CCSGG 1 cut(s) 1749
BcoDI GTCTC 5 cut(s) 276, 527, 536, 1183, 1851
BfaI CTAG 4 cut(s) 368, 563, 1259, 1322
BfmI CTRYAG 2 cut(s) 1064, 1329
BfoI RGCGCY 1 cut(s) 55
BisI GCNGC 3 cut(s) 94, 1022, 1720
BlpI GCTNAGC 1 cut(s) 1828
BlsI GCNGC 3 cut(s) 95, 1023, 1721
BmcAI AGTACT 1 cut(s) 372
Bme1390I CCNGG 4 cut(s) 397, 494, 1668, 1749
Bme18I GGWCC 2 cut(s) 712, 1069
BmeT110I CYCGRG 1 cut(s) 55
BmgBI CACGTC 1 cut(s) 1279
BmgT120I GGNCC 3 cut(s) 712, 1069, 1670
BmiI GGNNCC 1 cut(s) 115
BmrFI CCNGG 4 cut(s) 397, 494, 1668, 1749
BmrI ACTGGG 2 cut(s) 483, 775
BmsI GCATC 5 cut(s) 289, 401, 513, 744, 1425
BmuI ACTGGG 2 cut(s) 483, 775
BpiI GAAGAC 1 cut(s) 1467
BpmI CTGGAG 2 cut(s) 1287, 1650
Bpu1102I GCTNAGC 1 cut(s) 1828
BpuEI CTTGAG 2 cut(s) 1010, 1389
BpuMI CCSGG 1 cut(s) 1749
Bsa29I ATCGAT 1 cut(s) 123
BsaBI GATNNNNATC 1 cut(s) 1475
BsaHI GRCGYC 3 cut(s) 23, 230, 529
BsaI GGTCTC 2 cut(s) 276, 1183
BsaJI CCNNGG 3 cut(s) 81, 1624, 1667
BsaWI WCCGGW 1 cut(s) 921
BsaXI ACNNNNNCTCC 2 cut(s) 1648, 1678
Bsc4I CCNNNNNNNGG 5 cut(s) 110, 171, 462, 765, 1715
Bse118I RCCGGY 1 cut(s) 280
Bse1I ACTGG 3 cut(s) 478, 665, 770
Bse3DI GCAATG 2 cut(s) 429, 1095
Bse8I GATNNNNATC 1 cut(s) 1475
BseAI TCCGGA 1 cut(s) 921
BseBI CCWGG 3 cut(s) 397, 494, 1668
BseCI ATCGAT 1 cut(s) 123
BseDI CCNNGG 3 cut(s) 81, 1624, 1667
BseGI GGATG 4 cut(s) 392, 504, 669, 1705
BseJI GATNNNNATC 1 cut(s) 1475
BseLI CCNNNNNNNGG 5 cut(s) 110, 171, 462, 765, 1715
BseMI GCAATG 2 cut(s) 429, 1095
BseMII CTCAG 7 cut(s) 234, 699, 699, 1194, 1505, 1760, 1842
BseNI ACTGG 3 cut(s) 478, 665, 770
BseSI GKGCMC 2 cut(s) 639, 1580
BseXI GCAGC 2 cut(s) 105, 1033
Bsh1236I CGCG 1 cut(s) 540
BshFI GGCC 8 cut(s) 80, 132, 248, 492, 668, 1672, 1701, 1820
BshVI ATCGAT 1 cut(s) 123
BsiHKAI GWGCWC 3 cut(s) 639, 729, 1666
BsiHKCI CYCGRG 1 cut(s) 55
BsiSI CCGG 4 cut(s) 281, 535, 922, 1748
BslFI GGGAC 1 cut(s) 953
BslI CCNNNNNNNGG 5 cut(s) 110, 171, 462, 765, 1715
BsmAI GTCTC 5 cut(s) 276, 527, 536, 1183, 1851
BsmBI CGTCTC 2 cut(s) 527, 536
BsmFI GGGAC 1 cut(s) 953
BsmI GAATGC 1 cut(s) 1852
BsnI GGCC 8 cut(s) 80, 132, 248, 492, 668, 1672, 1701, 1820
Bso31I GGTCTC 2 cut(s) 276, 1183
BsoBI CYCGRG 1 cut(s) 55
Bsp1286I GDGCHC 4 cut(s) 639, 729, 1580, 1666
Bsp13I TCCGGA 1 cut(s) 921
Bsp143I GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
Bsp1720I GCTNAGC 1 cut(s) 1828
Bsp19I CCATGG 1 cut(s) 1624
BspACI CCGC 5 cut(s) 105, 644, 1414, 1719, 1832
BspANI GGCC 8 cut(s) 80, 132, 248, 492, 668, 1672, 1701, 1820
BspCNI CTCAG 7 cut(s) 233, 698, 700, 1193, 1504, 1761, 1841
BspDI ATCGAT 1 cut(s) 123
BspEI TCCGGA 1 cut(s) 921
BspFNI CGCG 1 cut(s) 540
BspHI TCATGA 2 cut(s) 933, 1606
BspLI GGNNCC 1 cut(s) 115
BspMAI CTGCAG 1 cut(s) 1333
BspPI GGATC 4 cut(s) 602, 1083, 1333, 1438
BspQI GCTCTTC 2 cut(s) 473, 1152
BspTNI GGTCTC 2 cut(s) 276, 1183
BsrDI GCAATG 2 cut(s) 429, 1095
BsrFI RCCGGY 1 cut(s) 280
BsrI ACTGG 3 cut(s) 478, 665, 770
BssAI RCCGGY 1 cut(s) 280
BssECI CCNNGG 3 cut(s) 81, 1624, 1667
BssMI GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
BssNI GRCGYC 3 cut(s) 23, 230, 529
BssT1I CCWWGG 1 cut(s) 1624
Bst2UI CCWGG 3 cut(s) 397, 494, 1668
Bst6I CTCTTC 2 cut(s) 473, 1152
BstACI GRCGYC 3 cut(s) 23, 230, 529
BstC8I GCNNGC 4 cut(s) 105, 810, 970, 1011
BstDEI CTNAG 7 cut(s) 220, 685, 708, 1180, 1491, 1769, 1828
BstDSI CCRYGG 1 cut(s) 1624
BstENI CCTNNNNNAGG 1 cut(s) 169
BstF5I GGATG 4 cut(s) 392, 504, 669, 1705
BstFNI CGCG 1 cut(s) 540
BstH2I RGCGCY 1 cut(s) 55
BstHHI GCGC 2 cut(s) 54, 540
BstKTI GATC 6 cut(s) 379, 597, 1091, 1328, 1446, 1867
BstMAI GTCTC 5 cut(s) 276, 527, 536, 1183, 1851
BstMBI GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
BstMWI GCNNNNNNNGC 5 cut(s) 40, 49, 60, 308, 535
BstNI CCWGG 3 cut(s) 397, 494, 1668
BstNSI RCATGY 1 cut(s) 1021
BstSCI CCNGG 4 cut(s) 395, 492, 1666, 1747
BstSFI CTRYAG 2 cut(s) 1064, 1329
BstSLI GKGCMC 2 cut(s) 639, 1580
BstUI CGCG 1 cut(s) 540
BstV1I GCAGC 2 cut(s) 105, 1033
BstV2I GAAGAC 1 cut(s) 1467
BstX2I RGATCY 2 cut(s) 1088, 1325
BstYI RGATCY 2 cut(s) 1088, 1325
Bsu15I ATCGAT 1 cut(s) 123
BsuRI GGCC 8 cut(s) 80, 132, 248, 492, 668, 1672, 1701, 1820
BsuTUI ATCGAT 1 cut(s) 123
BtgI CCRYGG 1 cut(s) 1624
BtrI CACGTC 1 cut(s) 1279
BtsCI GGATG 4 cut(s) 392, 504, 669, 1705
BtsIMutI CAGTG 5 cut(s) 471, 550, 919, 1389, 1620
Cac8I GCNNGC 4 cut(s) 105, 810, 970, 1011
CciI TCATGA 2 cut(s) 933, 1606
CfoI GCGC 2 cut(s) 54, 540
Cfr10I RCCGGY 1 cut(s) 280
Cfr13I GGNCC 3 cut(s) 712, 1069, 1670
ClaI ATCGAT 1 cut(s) 123
CseI GACGC 5 cut(s) 12, 219, 518, 529, 1472
Csp6I GTAC 4 cut(s) 217, 371, 443, 1596
CviQI GTAC 4 cut(s) 217, 371, 443, 1596
DdeI CTNAG 7 cut(s) 220, 685, 708, 1180, 1491, 1769, 1828
DpnI GATC 6 cut(s) 378, 596, 1090, 1327, 1445, 1866
DpnII GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
DraI TTTAAA 2 cut(s) 556, 1144
EaeI YGGCCR 4 cut(s) 130, 666, 1699, 1818
Eam1104I CTCTTC 2 cut(s) 473, 1152
EarI CTCTTC 2 cut(s) 473, 1152
Eco130I CCWWGG 1 cut(s) 1624
Eco31I GGTCTC 2 cut(s) 276, 1183
Eco32I GATATC 1 cut(s) 179
Eco47I GGWCC 2 cut(s) 712, 1069
Eco57I CTGAAG 1 cut(s) 1176
Eco88I CYCGRG 1 cut(s) 55
EcoNI CCTNNNNNAGG 1 cut(s) 169
EcoO109I RGGNCCY 2 cut(s) 1069, 1670
EcoRII CCWGG 3 cut(s) 395, 492, 1666
EcoRV GATATC 1 cut(s) 179
EcoT14I CCWWGG 1 cut(s) 1624
ErhI CCWWGG 1 cut(s) 1624
Esp3I CGTCTC 2 cut(s) 527, 536
FalI AAGNNNNNCTT 2 cut(s) 1719, 1751
FaqI GGGAC 1 cut(s) 953
FauI CCCGC 2 cut(s) 112, 637
FauNDI CATATG 2 cut(s) 614, 754
FbaI TGATCA 2 cut(s) 376, 1864
Fnu4HI GCNGC 3 cut(s) 94, 1022, 1720
FokI GGATG 4 cut(s) 379, 491, 676, 1692
Fsp4HI GCNGC 3 cut(s) 94, 1022, 1720
FspBI CTAG 4 cut(s) 368, 563, 1259, 1322
GlaI GCGC 2 cut(s) 53, 539
GluI GCNGC 3 cut(s) 94, 1022, 1720
GsuI CTGGAG 2 cut(s) 1287, 1650
HaeII RGCGCY 1 cut(s) 55
HaeIII GGCC 8 cut(s) 80, 132, 248, 492, 668, 1672, 1701, 1820
HapII CCGG 4 cut(s) 281, 535, 922, 1748
HgaI GACGC 5 cut(s) 12, 219, 518, 529, 1472
HhaI GCGC 2 cut(s) 54, 540
Hin1I GRCGYC 3 cut(s) 23, 230, 529
Hin6I GCGC 2 cut(s) 52, 538
HinP1I GCGC 2 cut(s) 52, 538
HincII GTYRAC 2 cut(s) 357, 817
HindII GTYRAC 2 cut(s) 357, 817
HinfI GANTC 6 cut(s) 867, 941, 1149, 1583, 1610, 1686
HpaI GTTAAC 1 cut(s) 817
HpaII CCGG 4 cut(s) 281, 535, 922, 1748
HphI GGTGA 3 cut(s) 769, 812, 1669
Hpy166II GTNNAC 7 cut(s) 217, 357, 548, 637, 817, 910, 1598
Hpy188I TCNGA 8 cut(s) 47, 599, 688, 962, 1077, 1156, 1183, 1770
Hpy188III TCNNGA 6 cut(s) 70, 922, 934, 986, 1033, 1607
Hpy8I GTNNAC 7 cut(s) 217, 357, 548, 637, 817, 910, 1598
Hpy99I CGWCG 4 cut(s) 10, 28, 235, 1826
HpyCH4IV ACGT 4 cut(s) 194, 429, 603, 1278
HpyCH4V TGCA 8 cut(s) 139, 392, 637, 808, 968, 1021, 1228, 1331
HpyF10VI GCNNNNNNNGC 5 cut(s) 40, 49, 60, 308, 535
HpyF3I CTNAG 7 cut(s) 220, 685, 708, 1180, 1491, 1769, 1828
HpySE526I ACGT 4 cut(s) 194, 429, 603, 1278
Hsp92I GRCGYC 3 cut(s) 23, 230, 529
HspAI GCGC 2 cut(s) 52, 538
Kpn2I TCCGGA 1 cut(s) 921
Ksp22I TGATCA 2 cut(s) 376, 1864
KspAI GTTAAC 1 cut(s) 817
Kzo9I GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
LguI GCTCTTC 2 cut(s) 473, 1152
LmnI GCTCC 4 cut(s) 48, 166, 1268, 1669
Lsp1109I GCAGC 2 cut(s) 105, 1033
LweI GCATC 5 cut(s) 289, 401, 513, 744, 1425
MaeI CTAG 4 cut(s) 368, 563, 1259, 1322
MaeII ACGT 4 cut(s) 194, 429, 603, 1278
MaeIII GTNAC 8 cut(s) 403, 584, 619, 746, 775, 800, 1044, 1521
MalI GATC 6 cut(s) 378, 596, 1090, 1327, 1445, 1866
MboI GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
MboII GAAGA 7 cut(s) 298, 460, 1067, 1169, 1472, 1568, 1850
MfeI CAATTG 1 cut(s) 1172
MflI RGATCY 2 cut(s) 1088, 1325
MhlI GDGCHC 4 cut(s) 639, 729, 1580, 1666
MlsI TGGCCA 2 cut(s) 668, 1701
MluCI AATT 9 cut(s) 73, 149, 387, 1172, 1236, 1530, 1547, 1618, 1692
MluNI TGGCCA 2 cut(s) 668, 1701
MlyI GAGTC 3 cut(s) 861, 935, 1695
MmeI TCCRAC 4 cut(s) 865, 1265, 1658, 1770
Mox20I TGGCCA 2 cut(s) 668, 1701
MroI TCCGGA 1 cut(s) 921
MroXI GAANNNNTTC 3 cut(s) 833, 1059, 1200
MscI TGGCCA 2 cut(s) 668, 1701
MseI TTAA 4 cut(s) 555, 816, 1143, 1508
MslI CAYNNNNRTG 2 cut(s) 1605, 1710
Msp20I TGGCCA 2 cut(s) 668, 1701
MspA1I CMGCKG 1 cut(s) 1832
MspI CCGG 4 cut(s) 281, 535, 922, 1748
MspR9I CCNGG 4 cut(s) 397, 494, 1668, 1749
MunI CAATTG 1 cut(s) 1172
Mva1269I GAATGC 1 cut(s) 1852
MvaI CCWGG 3 cut(s) 397, 494, 1668
MvnI CGCG 1 cut(s) 540
MwoI GCNNNNNNNGC 5 cut(s) 40, 49, 60, 308, 535
NciI CCSGG 1 cut(s) 1749
NcoI CCATGG 1 cut(s) 1624
NdeI CATATG 2 cut(s) 614, 754
NdeII GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
NlaIV GGNNCC 1 cut(s) 115
NmeAIII GCCGAG 1 cut(s) 620
NmuCI GTSAC 2 cut(s) 775, 800
NspI RCATGY 1 cut(s) 1021
PaeR7I CTCGAG 1 cut(s) 55
PagI TCATGA 2 cut(s) 933, 1606
PciSI GCTCTTC 2 cut(s) 473, 1152
PcsI WCGNNNNNNNCGW 2 cut(s) 426, 526
PctI GAATGC 1 cut(s) 1852
PdmI GAANNNNTTC 3 cut(s) 833, 1059, 1200
PfeI GAWTC 3 cut(s) 1149, 1583, 1610
PflMI CCANNNNNTGG 1 cut(s) 765
PkrI GCNGC 3 cut(s) 95, 1023, 1721
PleI GAGTC 3 cut(s) 861, 935, 1694
PpsI GAGTC 3 cut(s) 861, 935, 1694
PpuMI RGGWCCY 1 cut(s) 1069
Psp5II RGGWCCY 1 cut(s) 1069
Psp6I CCWGG 3 cut(s) 395, 492, 1666
PspGI CCWGG 3 cut(s) 395, 492, 1666
PspN4I GGNNCC 1 cut(s) 115
PspPI GGNCC 3 cut(s) 712, 1069, 1670
PspPPI RGGWCCY 1 cut(s) 1069
PspXI VCTCGAGB 1 cut(s) 55
PstI CTGCAG 1 cut(s) 1333
PsuI RGATCY 2 cut(s) 1088, 1325
RsaI GTAC 4 cut(s) 218, 372, 444, 1597
RsaNI GTAC 4 cut(s) 217, 371, 443, 1596
RseI CAYNNNNRTG 2 cut(s) 1605, 1710
SapI GCTCTTC 2 cut(s) 473, 1152
SaqAI TTAA 4 cut(s) 555, 816, 1143, 1508
SatI GCNGC 3 cut(s) 94, 1022, 1720
Sau3AI GATC 6 cut(s) 376, 594, 1088, 1325, 1443, 1864
Sau96I GGNCC 3 cut(s) 712, 1069, 1670
ScaI AGTACT 1 cut(s) 372
SchI GAGTC 3 cut(s) 861, 935, 1695
ScrFI CCNGG 4 cut(s) 397, 494, 1668, 1749
SduI GDGCHC 4 cut(s) 639, 729, 1580, 1666
SfaNI GCATC 5 cut(s) 289, 401, 513, 744, 1425
SfcI CTRYAG 2 cut(s) 1064, 1329
Sfr274I CTCGAG 1 cut(s) 55
SinI GGWCC 2 cut(s) 712, 1069
SlaI CTCGAG 1 cut(s) 55
SmiMI CAYNNNNRTG 2 cut(s) 1605, 1710
SmlI CTYRAG 3 cut(s) 55, 1025, 1404
SmoI CTYRAG 3 cut(s) 55, 1025, 1404
Sse9I AATT 9 cut(s) 73, 149, 387, 1172, 1236, 1530, 1547, 1618, 1692
SsiI CCGC 5 cut(s) 105, 644, 1414, 1719, 1832
SspI AATATT 1 cut(s) 1199
SspMI CTAG 4 cut(s) 368, 563, 1259, 1322
StyD4I CCNGG 4 cut(s) 395, 492, 1666, 1747
StyI CCWWGG 1 cut(s) 1624
TaiI ACGT 4 cut(s) 197, 432, 606, 1281
TaqI TCGA 7 cut(s) 56, 89, 123, 240, 297, 1215, 1724
TasI AATT 9 cut(s) 73, 149, 387, 1172, 1236, 1530, 1547, 1618, 1692
TatI WGTACW 3 cut(s) 216, 370, 1595
TauI GCSGC 1 cut(s) 1722
TfiI GAWTC 3 cut(s) 1149, 1583, 1610
Tru1I TTAA 4 cut(s) 555, 816, 1143, 1508
Tru9I TTAA 4 cut(s) 555, 816, 1143, 1508
TscAI CASTG 5 cut(s) 478, 550, 919, 1389, 1620
TseFI GTSAC 2 cut(s) 775, 800
TseI GCWGC 2 cut(s) 93, 1021
Tsp45I GTSAC 2 cut(s) 775, 800
TspDTI ATGAA 8 cut(s) 4, 922, 1202, 1473, 1623, 1685, 1728, 1730
TspGWI ACGGA 2 cut(s) 1103, 1595
TspRI CASTG 5 cut(s) 478, 550, 919, 1389, 1620
Van91I CCANNNNNTGG 1 cut(s) 765
VneI GTGCAC 1 cut(s) 635
VpaK11BI GGWCC 2 cut(s) 712, 1069
XagI CCTNNNNNAGG 1 cut(s) 169
XapI RAATTY 4 cut(s) 73, 149, 1236, 1530
XceI RCATGY 1 cut(s) 1021
XhoI CTCGAG 1 cut(s) 55
XmnI GAANNNNTTC 3 cut(s) 833, 1059, 1200
XspI CTAG 4 cut(s) 368, 563, 1259, 1322
ZrmI AGTACT 1 cut(s) 372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.