Topless-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02730 FvH4_1g02730 |
| rosa_chinensis | RchiOBHm_Chr4g0388361 RchiOBHm_Chr5g0002681 RchiOBHm_Chr5g0040691 RchiOBHm_Chr6g0261161 |
| rosa_multiflora | Rmu_sc0001572.1_g000035 |
| rosa_roxburghii | Rroxscaffold_4G00318010 |
| rosa_rugosa | Rorug01G0019300 Rorug01G0019300 Rorug04G0047500 Rorug05G0230300 Rorug05G0254100 Rorug06G0356100 Rorug06G0356200 |
| rosa_samantha | Rh4AG102300 Rh4CG110600 Rh4DG000100 Rh5AG185000 Rh5AG378600 Rh5AG514600 Rh5DG128300 Rh5DG519800 Rh6AG242600 Rh6CG051300 Rh6CG052900 Rh6CG105300 |
| rosa_wichuraiana | Rw1G019810 Rw1G024070 Rw3G020490 Rw4G001530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 232 |
| AcsI | RAATTY | 2 cut(s) | 123, 133 |
| AfaI | GTAC | 1 cut(s) | 28 |
| AluBI | AGCT | 2 cut(s) | 95, 179 |
| AluI | AGCT | 2 cut(s) | 95, 179 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| AlwI | GGATC | 1 cut(s) | 232 |
| AoxI | GGCC | 1 cut(s) | 201 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| ApoI | RAATTY | 2 cut(s) | 123, 133 |
| AsuHPI | GGTGA | 1 cut(s) | 307 |
| BbvCI | CCTCAGC | 1 cut(s) | 205 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 32 |
| BciVI | GTATCC | 1 cut(s) | 160 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BfuI | GTATCC | 1 cut(s) | 160 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| BmsI | GCATC | 1 cut(s) | 22 |
| Bpu10I | CCTNAGC | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 1 cut(s) | 282 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 249, 279 |
| Bse118I | RCCGGY | 1 cut(s) | 49 |
| Bse1I | ACTGG | 1 cut(s) | 297 |
| BseDI | CCNNGG | 1 cut(s) | 282 |
| BseMII | CTCAG | 2 cut(s) | 146, 219 |
| BseNI | ACTGG | 1 cut(s) | 297 |
| BseRI | GAGGAG | 1 cut(s) | 48 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| BshFI | GGCC | 1 cut(s) | 203 |
| BsiSI | CCGG | 1 cut(s) | 50 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| BsnI | GGCC | 1 cut(s) | 203 |
| Bsp143I | GATC | 2 cut(s) | 224, 259 |
| Bsp19I | CCATGG | 1 cut(s) | 282 |
| BspANI | GGCC | 1 cut(s) | 203 |
| BspCNI | CTCAG | 2 cut(s) | 147, 218 |
| BspPI | GGATC | 1 cut(s) | 232 |
| BsrFI | RCCGGY | 1 cut(s) | 49 |
| BsrI | ACTGG | 1 cut(s) | 297 |
| BssAI | RCCGGY | 1 cut(s) | 49 |
| BssECI | CCNNGG | 1 cut(s) | 282 |
| BssMI | GATC | 2 cut(s) | 224, 259 |
| BssT1I | CCWWGG | 1 cut(s) | 282 |
| Bst4CI | ACNGT | 3 cut(s) | 90, 163, 241 |
| BstC8I | GCNNGC | 2 cut(s) | 51, 279 |
| BstDEI | CTNAG | 2 cut(s) | 155, 205 |
| BstDSI | CCRYGG | 1 cut(s) | 282 |
| BstKTI | GATC | 2 cut(s) | 227, 262 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMBI | GATC | 2 cut(s) | 224, 259 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 188 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| BsuI | GTATCC | 1 cut(s) | 160 |
| BsuRI | GGCC | 1 cut(s) | 203 |
| BtgI | CCRYGG | 1 cut(s) | 282 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 2 cut(s) | 51, 279 |
| Cfr10I | RCCGGY | 1 cut(s) | 49 |
| Csp6I | GTAC | 1 cut(s) | 27 |
| CviAII | CATG | 2 cut(s) | 283, 317 |
| CviJI | RGCY | 6 cut(s) | 53, 95, 179, 191, 203, 281 |
| CviKI_1 | RGCY | 6 cut(s) | 53, 95, 179, 191, 203, 281 |
| CviQI | GTAC | 1 cut(s) | 27 |
| DdeI | CTNAG | 2 cut(s) | 155, 205 |
| DpnI | GATC | 2 cut(s) | 226, 261 |
| DpnII | GATC | 2 cut(s) | 224, 259 |
| Eco130I | CCWWGG | 1 cut(s) | 282 |
| Eco147I | AGGCCT | 1 cut(s) | 203 |
| EcoT14I | CCWWGG | 1 cut(s) | 282 |
| ErhI | CCWWGG | 1 cut(s) | 282 |
| FaeI | CATG | 2 cut(s) | 286, 320 |
| FaiI | YATR | 4 cut(s) | 139, 141, 284, 318 |
| FatI | CATG | 2 cut(s) | 282, 316 |
| FauNDI | CATATG | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 203 |
| HapII | CCGG | 1 cut(s) | 50 |
| Hin1II | CATG | 2 cut(s) | 286, 320 |
| HincII | GTYRAC | 1 cut(s) | 13 |
| HindII | GTYRAC | 1 cut(s) | 13 |
| HinfI | GANTC | 1 cut(s) | 268 |
| HpaI | GTTAAC | 1 cut(s) | 13 |
| HpaII | CCGG | 1 cut(s) | 50 |
| HphI | GGTGA | 1 cut(s) | 307 |
| Hpy166II | GTNNAC | 2 cut(s) | 13, 44 |
| Hpy188III | TCNNGA | 1 cut(s) | 174 |
| Hpy8I | GTNNAC | 2 cut(s) | 13, 44 |
| HpyAV | CCTTC | 2 cut(s) | 74, 193 |
| HpyCH4III | ACNGT | 3 cut(s) | 90, 163, 241 |
| HpyCH4V | TGCA | 1 cut(s) | 35 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 188 |
| HpyF3I | CTNAG | 2 cut(s) | 155, 205 |
| Hsp92II | CATG | 2 cut(s) | 286, 320 |
| KroI | GCCGGC | 1 cut(s) | 49 |
| KroNI | GCCGGC | 1 cut(s) | 51 |
| KspAI | GTTAAC | 1 cut(s) | 13 |
| Kzo9I | GATC | 2 cut(s) | 224, 259 |
| LpnPI | CCDG | 6 cut(s) | 63, 113, 187, 234, 278, 291 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| LweI | GCATC | 1 cut(s) | 22 |
| MaeIII | GTNAC | 1 cut(s) | 265 |
| MalI | GATC | 2 cut(s) | 226, 261 |
| MboI | GATC | 2 cut(s) | 224, 259 |
| MluCI | AATT | 3 cut(s) | 123, 133, 144 |
| MlyI | GAGTC | 1 cut(s) | 262 |
| MmeI | TCCRAC | 2 cut(s) | 223, 268 |
| MnlI | CCTC | 2 cut(s) | 69, 214 |
| MroNI | GCCGGC | 1 cut(s) | 49 |
| MseI | TTAA | 3 cut(s) | 12, 72, 120 |
| MspI | CCGG | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 188 |
| NaeI | GCCGGC | 1 cut(s) | 51 |
| NcoI | CCATGG | 1 cut(s) | 282 |
| NdeI | CATATG | 1 cut(s) | 139 |
| NdeII | GATC | 2 cut(s) | 224, 259 |
| NgoMIV | GCCGGC | 1 cut(s) | 49 |
| NlaIII | CATG | 2 cut(s) | 286, 320 |
| NmuCI | GTSAC | 1 cut(s) | 265 |
| PceI | AGGCCT | 1 cut(s) | 203 |
| PdiI | GCCGGC | 1 cut(s) | 51 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| PleI | GAGTC | 1 cut(s) | 262 |
| PpsI | GAGTC | 1 cut(s) | 262 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 151, 183 |
| RsaI | GTAC | 1 cut(s) | 28 |
| RsaNI | GTAC | 1 cut(s) | 27 |
| SaqAI | TTAA | 3 cut(s) | 12, 72, 120 |
| SatI | GCNGC | 1 cut(s) | 180 |
| Sau3AI | GATC | 2 cut(s) | 224, 259 |
| SchI | GAGTC | 1 cut(s) | 262 |
| SetI | ASST | 4 cut(s) | 18, 97, 152, 181 |
| SfaNI | GCATC | 1 cut(s) | 22 |
| SgeI | CNNG | 9 cut(s) | 36, 62, 140, 186, 261, 275, 290, 295, 305 |
| Sse9I | AATT | 3 cut(s) | 123, 133, 144 |
| SseBI | AGGCCT | 1 cut(s) | 203 |
| StuI | AGGCCT | 1 cut(s) | 203 |
| StyI | CCWWGG | 1 cut(s) | 282 |
| TaaI | ACNGT | 3 cut(s) | 90, 163, 241 |
| TaqI | TCGA | 1 cut(s) | 262 |
| TasI | AATT | 3 cut(s) | 123, 133, 144 |
| TatI | WGTACW | 1 cut(s) | 26 |
| Tru1I | TTAA | 3 cut(s) | 12, 72, 120 |
| Tru9I | TTAA | 3 cut(s) | 12, 72, 120 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseFI | GTSAC | 1 cut(s) | 265 |
| TseI | GCWGC | 1 cut(s) | 179 |
| Tsp45I | GTSAC | 1 cut(s) | 265 |
| TspDTI | ATGAA | 2 cut(s) | 126, 292 |
| TspRI | CASTG | 1 cut(s) | 168 |
| XapI | RAATTY | 2 cut(s) | 123, 133 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 289 |