Topless-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02730 FvH4_1g02730 |
| rosa_chinensis | RchiOBHm_Chr4g0388361 RchiOBHm_Chr5g0002681 RchiOBHm_Chr5g0040691 RchiOBHm_Chr6g0261161 |
| rosa_multiflora | Rmu_sc0001572.1_g000035 |
| rosa_roxburghii | Rroxscaffold_4G00318010 |
| rosa_rugosa | Rorug01G0019300 Rorug01G0019300 Rorug04G0047500 Rorug05G0230300 Rorug05G0254100 Rorug06G0356100 Rorug06G0356200 |
| rosa_samantha | Rh4AG102300 Rh4CG110600 Rh4DG000100 Rh5AG185000 Rh5AG378600 Rh5AG514600 Rh5DG128300 Rh5DG519800 Rh6AG242600 Rh6CG051300 Rh6CG052900 Rh6CG105300 |
| rosa_wichuraiana | Rw1G019810 Rw1G024070 Rw3G020490 Rw4G001530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 123, 133 |
| AfaI | GTAC | 1 cut(s) | 28 |
| AluBI | AGCT | 2 cut(s) | 95, 179 |
| AluI | AGCT | 2 cut(s) | 95, 179 |
| Alw26I | GTCTC | 1 cut(s) | 103 |
| ApeKI | GCWGC | 1 cut(s) | 179 |
| ApoI | RAATTY | 2 cut(s) | 123, 133 |
| BbvI | GCAGC | 1 cut(s) | 166 |
| BccI | CCATC | 1 cut(s) | 32 |
| BcoDI | GTCTC | 1 cut(s) | 103 |
| BisI | GCNGC | 1 cut(s) | 180 |
| BlsI | GCNGC | 1 cut(s) | 181 |
| BmsI | GCATC | 2 cut(s) | 22, 157 |
| Bse118I | RCCGGY | 1 cut(s) | 49 |
| BseGI | GGATG | 1 cut(s) | 172 |
| BseMII | CTCAG | 1 cut(s) | 146 |
| BseRI | GAGGAG | 1 cut(s) | 48 |
| BseXI | GCAGC | 1 cut(s) | 166 |
| BsiSI | CCGG | 1 cut(s) | 50 |
| BsmAI | GTCTC | 1 cut(s) | 103 |
| BspCNI | CTCAG | 1 cut(s) | 147 |
| BsrFI | RCCGGY | 1 cut(s) | 49 |
| BssAI | RCCGGY | 1 cut(s) | 49 |
| Bst4CI | ACNGT | 2 cut(s) | 90, 163 |
| BstC8I | GCNNGC | 1 cut(s) | 51 |
| BstDEI | CTNAG | 2 cut(s) | 155, 199 |
| BstF5I | GGATG | 1 cut(s) | 172 |
| BstMAI | GTCTC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 176, 188 |
| BstV1I | GCAGC | 1 cut(s) | 166 |
| BtsCI | GGATG | 1 cut(s) | 172 |
| BtsIMutI | CAGTG | 1 cut(s) | 168 |
| Cac8I | GCNNGC | 1 cut(s) | 51 |
| Cfr10I | RCCGGY | 1 cut(s) | 49 |
| Csp6I | GTAC | 1 cut(s) | 27 |
| CviJI | RGCY | 4 cut(s) | 53, 95, 179, 191 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 95, 179, 191 |
| CviQI | GTAC | 1 cut(s) | 27 |
| DdeI | CTNAG | 2 cut(s) | 155, 199 |
| FaiI | YATR | 2 cut(s) | 139, 141 |
| FauNDI | CATATG | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 1 cut(s) | 180 |
| FokI | GGATG | 1 cut(s) | 179 |
| Fsp4HI | GCNGC | 1 cut(s) | 180 |
| GluI | GCNGC | 1 cut(s) | 180 |
| HapII | CCGG | 1 cut(s) | 50 |
| HincII | GTYRAC | 1 cut(s) | 13 |
| HindII | GTYRAC | 1 cut(s) | 13 |
| HpaI | GTTAAC | 1 cut(s) | 13 |
| HpaII | CCGG | 1 cut(s) | 50 |
| Hpy166II | GTNNAC | 2 cut(s) | 13, 44 |
| Hpy188I | TCNGA | 1 cut(s) | 202 |
| Hpy188III | TCNNGA | 1 cut(s) | 174 |
| Hpy8I | GTNNAC | 2 cut(s) | 13, 44 |
| HpyAV | CCTTC | 1 cut(s) | 74 |
| HpyCH4III | ACNGT | 2 cut(s) | 90, 163 |
| HpyCH4V | TGCA | 1 cut(s) | 35 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 176, 188 |
| HpyF3I | CTNAG | 2 cut(s) | 155, 199 |
| KroI | GCCGGC | 1 cut(s) | 49 |
| KroNI | GCCGGC | 1 cut(s) | 51 |
| KspAI | GTTAAC | 1 cut(s) | 13 |
| LpnPI | CCDG | 3 cut(s) | 63, 113, 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 166 |
| LweI | GCATC | 2 cut(s) | 22, 157 |
| MluCI | AATT | 3 cut(s) | 123, 133, 144 |
| MnlI | CCTC | 1 cut(s) | 69 |
| MroNI | GCCGGC | 1 cut(s) | 49 |
| MseI | TTAA | 3 cut(s) | 12, 72, 120 |
| MspI | CCGG | 1 cut(s) | 50 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 176, 188 |
| NaeI | GCCGGC | 1 cut(s) | 51 |
| NdeI | CATATG | 1 cut(s) | 139 |
| NgoMIV | GCCGGC | 1 cut(s) | 49 |
| PdiI | GCCGGC | 1 cut(s) | 51 |
| PkrI | GCNGC | 1 cut(s) | 181 |
| RsaI | GTAC | 1 cut(s) | 28 |
| RsaNI | GTAC | 1 cut(s) | 27 |
| SaqAI | TTAA | 3 cut(s) | 12, 72, 120 |
| SatI | GCNGC | 1 cut(s) | 180 |
| SetI | ASST | 4 cut(s) | 18, 97, 152, 181 |
| SfaNI | GCATC | 2 cut(s) | 22, 157 |
| SgeI | CNNG | 4 cut(s) | 36, 62, 140, 186 |
| Sse9I | AATT | 3 cut(s) | 123, 133, 144 |
| TaaI | ACNGT | 2 cut(s) | 90, 163 |
| TasI | AATT | 3 cut(s) | 123, 133, 144 |
| TatI | WGTACW | 1 cut(s) | 26 |
| Tru1I | TTAA | 3 cut(s) | 12, 72, 120 |
| Tru9I | TTAA | 3 cut(s) | 12, 72, 120 |
| TscAI | CASTG | 1 cut(s) | 168 |
| TseI | GCWGC | 1 cut(s) | 179 |
| TspDTI | ATGAA | 1 cut(s) | 126 |
| TspRI | CASTG | 1 cut(s) | 168 |
| XapI | RAATTY | 2 cut(s) | 123, 133 |