OTU-like cysteine protease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0413381 RchiOBHm_Chr5g0056851 RchiOBHm_Chr7g0226991 |
| rosa_multiflora | Rmu_sc0008546.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00056330 Rroxscaffold_2G00096570 Rroxscaffold_5G00348720 Rroxscaffold_7G00197630 |
| rosa_samantha | Rh1BG300600 Rh3AG259300 Rh5AG233000 Rh5BG453800 Rh5CG407100 Rh5CG476100 |
| rosa_wichuraiana | Rw5G026060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 77 |
| Acc36I | ACCTGC | 1 cut(s) | 61 |
| AjnI | CCWGG | 1 cut(s) | 81 |
| AluBI | AGCT | 2 cut(s) | 23, 88 |
| AluI | AGCT | 2 cut(s) | 23, 88 |
| AoxI | GGCC | 1 cut(s) | 118 |
| ApeKI | GCWGC | 1 cut(s) | 4 |
| AxyI | CCTNAGG | 1 cut(s) | 122 |
| BciT130I | CCWGG | 1 cut(s) | 83 |
| BclI | TGATCA | 1 cut(s) | 25 |
| BfaI | CTAG | 1 cut(s) | 44 |
| BfmI | CTRYAG | 1 cut(s) | 5 |
| BfuAI | ACCTGC | 1 cut(s) | 61 |
| BisI | GCNGC | 1 cut(s) | 5 |
| BlsI | GCNGC | 1 cut(s) | 6 |
| Bme1390I | CCNGG | 1 cut(s) | 83 |
| BmrFI | CCNGG | 1 cut(s) | 83 |
| Bse21I | CCTNAGG | 1 cut(s) | 122 |
| BseBI | CCWGG | 1 cut(s) | 83 |
| BshFI | GGCC | 1 cut(s) | 120 |
| BsnI | GGCC | 1 cut(s) | 120 |
| Bsp143I | GATC | 1 cut(s) | 25 |
| BspANI | GGCC | 1 cut(s) | 120 |
| BspMAI | CTGCAG | 1 cut(s) | 9 |
| BspMI | ACCTGC | 1 cut(s) | 61 |
| BssMI | GATC | 1 cut(s) | 25 |
| Bst2UI | CCWGG | 1 cut(s) | 83 |
| BstC8I | GCNNGC | 1 cut(s) | 118 |
| BstDEI | CTNAG | 2 cut(s) | 122, 132 |
| BstKTI | GATC | 1 cut(s) | 28 |
| BstMBI | GATC | 1 cut(s) | 25 |
| BstNI | CCWGG | 1 cut(s) | 83 |
| BstNSI | RCATGY | 1 cut(s) | 62 |
| BstSCI | CCNGG | 1 cut(s) | 81 |
| BstSFI | CTRYAG | 1 cut(s) | 5 |
| Bsu36I | CCTNAGG | 1 cut(s) | 122 |
| BsuRI | GGCC | 1 cut(s) | 120 |
| BveI | ACCTGC | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 1 cut(s) | 118 |
| CviAII | CATG | 2 cut(s) | 53, 59 |
| CviJI | RGCY | 4 cut(s) | 23, 88, 94, 120 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 88, 94, 120 |
| DdeI | CTNAG | 2 cut(s) | 122, 132 |
| DpnI | GATC | 1 cut(s) | 27 |
| DpnII | GATC | 1 cut(s) | 25 |
| Eco147I | AGGCCT | 1 cut(s) | 120 |
| Eco81I | CCTNAGG | 1 cut(s) | 122 |
| EcoRII | CCWGG | 1 cut(s) | 81 |
| FaeI | CATG | 2 cut(s) | 56, 62 |
| FaiI | YATR | 5 cut(s) | 54, 60, 77, 91, 108 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 115 |
| FatI | CATG | 2 cut(s) | 52, 58 |
| FbaI | TGATCA | 1 cut(s) | 25 |
| Fnu4HI | GCNGC | 1 cut(s) | 5 |
| Fsp4HI | GCNGC | 1 cut(s) | 5 |
| FspBI | CTAG | 1 cut(s) | 44 |
| FspEI | CC | 8 cut(s) | 56, 65, 68, 76, 80, 95, 102, 109 |
| GluI | GCNGC | 1 cut(s) | 5 |
| HaeIII | GGCC | 1 cut(s) | 120 |
| Hin1II | CATG | 2 cut(s) | 56, 62 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| HpyCH4V | TGCA | 1 cut(s) | 7 |
| HpyF3I | CTNAG | 2 cut(s) | 122, 132 |
| Hsp92II | CATG | 2 cut(s) | 56, 62 |
| Ksp22I | TGATCA | 1 cut(s) | 25 |
| Kzo9I | GATC | 1 cut(s) | 25 |
| LmnI | GCTCC | 1 cut(s) | 85 |
| LpnPI | CCDG | 5 cut(s) | 56, 68, 80, 95, 102 |
| MaeI | CTAG | 1 cut(s) | 44 |
| MalI | GATC | 1 cut(s) | 27 |
| MboI | GATC | 1 cut(s) | 25 |
| MluCI | AATT | 1 cut(s) | 110 |
| MslI | CAYNNNNRTG | 1 cut(s) | 57 |
| MspR9I | CCNGG | 1 cut(s) | 83 |
| MvaI | CCWGG | 1 cut(s) | 83 |
| NdeII | GATC | 1 cut(s) | 25 |
| NlaIII | CATG | 2 cut(s) | 56, 62 |
| NspI | RCATGY | 1 cut(s) | 62 |
| PceI | AGGCCT | 1 cut(s) | 120 |
| PkrI | GCNGC | 1 cut(s) | 6 |
| PsiI | TTATAA | 1 cut(s) | 77 |
| Psp6I | CCWGG | 1 cut(s) | 81 |
| PspGI | CCWGG | 1 cut(s) | 81 |
| PstI | CTGCAG | 1 cut(s) | 9 |
| RseI | CAYNNNNRTG | 1 cut(s) | 57 |
| SatI | GCNGC | 1 cut(s) | 5 |
| Sau3AI | GATC | 1 cut(s) | 25 |
| ScrFI | CCNGG | 1 cut(s) | 83 |
| SetI | ASST | 3 cut(s) | 25, 75, 90 |
| SfcI | CTRYAG | 1 cut(s) | 5 |
| SgeI | CNNG | 9 cut(s) | 26, 56, 65, 71, 83, 94, 95, 107, 129 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 57 |
| Sse9I | AATT | 1 cut(s) | 110 |
| SseBI | AGGCCT | 1 cut(s) | 120 |
| SspMI | CTAG | 1 cut(s) | 44 |
| StuI | AGGCCT | 1 cut(s) | 120 |
| StyD4I | CCNGG | 1 cut(s) | 81 |
| TaqI | TCGA | 1 cut(s) | 13 |
| TasI | AATT | 1 cut(s) | 110 |
| TseI | GCWGC | 1 cut(s) | 4 |
| TspDTI | ATGAA | 1 cut(s) | 123 |
| XbaI | TCTAGA | 1 cut(s) | 43 |
| XceI | RCATGY | 1 cut(s) | 62 |
| XspI | CTAG | 1 cut(s) | 44 |