Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005954

Physical Location & Seq

Genomic Coordinates Forward (+)

12770718 .. 12772914

Gene Structure 2197 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ29845

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGCAAGAAATGGCAATTCTAAGGCTTTCGCAGCTCTTACTTCTTCCTATTCTTCTAGTTCTCTCCATTTCTTGTACAGCCTCAGCTTCATCCTCAGCTCCTGAGAACTTTGTTTCCTGTCTTTTAAGCCATTCGCTCCCTTCTCACCCAATCGGTCCAGCAATTTACACTCCCAACAATGCTTCTTACTCCTCCGTTTTGGAATCCTACATCCGAAACCTCCGTTTCTACGAATCATACACCCGAAAACCTTACCTTATTATCACCGCATTGCACGTCTCCCATGTGCAACAGGCCATCCTTTGTGCTCAAAAGCACAACTTACAGATGAAAATTAGAAGCGGAGGCCACGATTTCGAGGGCGCGTCGTATGTGGCTGAAGTCCCATTCTTCATCCTCGACCTGTTTAATCTTCGGACCATCAACGTAGACATCAAAACCGAGACTGCATGGGTCCAGGCCGGTGCTACTCTCGGCGAAGTTTACTACAGAATTTACGAGAAAAGCAAAGTCCATGGATTCCCCGCCGGTGTATGCCCCACAGTCGGTGTTGGAGGACACTTCAGTGGCGGTGGATATGGTAACATGATGAGAAAGTACGGCTTGTCAGTTGACAACATCGTCGATGCACAAATAGTTGATGTGCACGGAAGACTTCTTGATCGAAAATCGATGGGAGAAGACCTCTTTTGGGCCATCACCGGAGGTGGAGGAGCCAGCTTTGGAGTGGTGATCGCCTACAAGATCAACCTTGTACGCGTCCCAGAAACCGTTACTGTTTTCAGGGTTATAAGAACCTTGGAACAGAACGCAACTGACATTGTGTACCGTTGGCAATATGTCGCAAATAAGCTGGACAATGACTTGTTCATCAGGCTTATCATGGATGTTGTTAATGTAACTGGCTCTCAAACTGGAGAAAAGACTCTAAGAGCTACATTCAACGCCTTGTTTCTTGGAGACTCCGCAAGACTACTCTCCGTGATGAACAAGAGTTTCCCTGAACTGGGTTTGGAGCAATCCGATTGCCAAAAAATGAGTTGGGTTGAATCGACGCTTTTCTGGACAGACTTTCCAAACGGGACAGCTCCGGAGGCTTTGCTTTCTAGAGTTCCTCAAGTACGTGCCCACTTCAAGCGGAAGTCGGACTACGTCAAGCAGCCAATTCCGAAAGCTGGTTTGAAGTGGATTATTCAGAAAATGATCGAGTTGCAGACGCCCCTGTTGACTTTCAACCCTTACGGCGGAAGAATGGCTGAGATTGCGGCATCTGCAAAACCTTTTCCACATAGAGCTGGGAATCTCTGGATGGTTCAGTATGCAACAAACTGGGACGCTACTGGGTCCGAGGCTGCGGAGAAATACATCGATTTGACGAGGAAGTTGTTCGAGTACATGACTCCCTTCGTTTCCAAGAGCCCGAGGGAAGCCTTCTTCAACTACAAAGATCTCGACATTGGGATCAACCATAATGACAAGGGAAGCAATTTTGAGGGAAGAGTTTTTGGGGTCAAGTATTTCAAGGAAAATTTCGATAAATTGGTGCTTATTAAGACCAAGGTTGATCCTGGTAATTTCTTTAGGAACGAACAGAGTATCCCTACTCTTCCATATATTAATATACATACATGTTCACCCTTCGACTCTCTCATTTTGCAATACCAAAATATCTCTTTTCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BBE FAD_binding_4

Protein Analysis

560

Amino Acids

62.92

Weight (kDa)

8.75

Isoelectric Point (pI)

36.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	86 - 220	1.9e-22	FAD binding domain
BBE	PF08031	477 - 534	1.1e-17	Berberine and berberine like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005954)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30700
fragaria_vesca	FvH4_3g11300 FvH4_3g11330
malus_domestica	MD05G1266000.v1.1 MD05G1266200.v1.1 MD05G1266400.v1.1 MD05G1266900.v1.1
prunus_persica	Prupe.1G171200_v2.0.a1 Prupe.4G099500_v2.0.a1 Prupe.7G051400_v2.0.a1
pyrus_communis	pycom05g25010 pycom05g25020
rosa_chinensis	RchiOBHm_Chr5g0018191 RchiOBHm_Chr5g0018231 RchiOBHm_Chr5g0018281
rosa_laevigata	RLG00000012618 RLG00000032345 RLG00000032346 RLG00000032347
rosa_multiflora	Rmu_sc0008158.1_g000003 Rmu_sc0012569.1_g000002 Rmu_sc0013020.1_g000006 Rmu_sc0018521.1_g000002
rosa_roxburghii	Rroxscaffold_1G00059470
rosa_rugosa	Rorug05G0041100
rosa_wichuraiana	Rw5G011710 Rw5G011720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	791
AasI	GACNNNNNNGTC	1 cut(s)	620
AccI	GTMKAC	1 cut(s)	429
AccII	CGCG	2 cut(s)	365, 759
AccIII	TCCGGA	1 cut(s)	1090
AciI	CCGC	9 cut(s)	267, 342, 525, 570, 966, 1138, 1245, 1265, 1355
AclWI	GGATC	2 cut(s)	1469, 1559
AcsI	RAATTY	2 cut(s)	492, 1528
AcuI	CTGAAG	2 cut(s)	399, 547
AcyI	GRCGYC	1 cut(s)	1217
AfaI	GTAC	6 cut(s)	76, 599, 756, 827, 1122, 1394
AfiI	CCNNNNNNNGG	6 cut(s)	545, 691, 1006, 1007, 1175, 1244
AflIII	ACRYGT	2 cut(s)	757, 1628
AgsI	TTSAA	7 cut(s)	943, 1049, 1135, 1183, 1234, 1438, 1522
AjiI	CACGTC	1 cut(s)	277
AjnI	CCWGG	2 cut(s)	456, 1567
AleI	CACNNNNGTG	1 cut(s)	564
AloI	GAACNNNNNNTCC	4 cut(s)	98, 130, 1581, 1613
AluBI	AGCT	9 cut(s)	34, 86, 98, 720, 853, 935, 1088, 1175, 1295
AluI	AGCT	9 cut(s)	34, 86, 98, 720, 853, 935, 1088, 1175, 1295
Alw21I	GWGCWC	2 cut(s)	310, 648
Alw26I	GTCTC	3 cut(s)	283, 437, 954
Alw44I	GTGCAC	1 cut(s)	644
AlwI	GGATC	2 cut(s)	1469, 1559
AlwNI	CAGNNNCTG	1 cut(s)	101
Ama87I	CYCGRG	1 cut(s)	1420
Aor13HI	TCCGGA	1 cut(s)	1090
AoxI	GGCC	4 cut(s)	294, 346, 459, 693
ApaLI	GTGCAC	1 cut(s)	644
ApeKI	GCWGC	3 cut(s)	31, 1159, 1352
ApoI	RAATTY	2 cut(s)	492, 1528
AseI	ATTAAT	1 cut(s)	1617
Asp700I	GAANNNNTTC	1 cut(s)	1385
AspLEI	GCGC	1 cut(s)	365
AspS9I	GGNCC	5 cut(s)	155, 417, 454, 693, 1344
AsuHPI	GGTGA	5 cut(s)	137, 256, 691, 742, 1626
AvaI	CYCGRG	1 cut(s)	1420
AvaII	GGWCC	4 cut(s)	155, 417, 454, 1344
BaeGI	GKGCMC	2 cut(s)	648, 1129
BanII	GRGCYC	1 cut(s)	1421
BarI	GAAGNNNNNNTAC	2 cut(s)	1133, 1165
BbsI	GAAGAC	2 cut(s)	658, 687
Bbv12I	GWGCWC	2 cut(s)	310, 648
BbvCI	CCTCAGC	2 cut(s)	82, 94
BbvI	GCAGC	3 cut(s)	43, 1171, 1339
BccI	CCATC	5 cut(s)	305, 428, 667, 704, 1303
BceAI	ACGGC	2 cut(s)	616, 1258
BciT130I	CCWGG	2 cut(s)	458, 1569
BciVI	GTATCC	1 cut(s)	1607
BcoDI	GTCTC	3 cut(s)	283, 437, 954
BfaI	CTAG	3 cut(s)	56, 1107, 1681
BfmI	CTRYAG	1 cut(s)	487
BfuI	GTATCC	1 cut(s)	1607
BglII	AGATCT	1 cut(s)	1447
BisI	GCNGC	4 cut(s)	32, 1160, 1266, 1353
BlsI	GCNGC	4 cut(s)	33, 1161, 1267, 1354
Bme1390I	CCNGG	2 cut(s)	458, 1569
Bme18I	GGWCC	4 cut(s)	155, 417, 454, 1344
BmeT110I	CYCGRG	1 cut(s)	1420
BmgBI	CACGTC	1 cut(s)	277
BmgT120I	GGNCC	5 cut(s)	155, 417, 454, 693, 1344
BmiI	GGNNCC	3 cut(s)	455, 715, 1345
BmrFI	CCNGG	2 cut(s)	458, 1569
BmrI	ACTGGG	3 cut(s)	1016, 1339, 1350
BmsI	GCATC	2 cut(s)	616, 1277
BmuI	ACTGGG	3 cut(s)	1016, 1339, 1350
BpiI	GAAGAC	2 cut(s)	658, 687
BplI	GAGNNNNNCTC	2 cut(s)	669, 701
BpmI	CTGGAG	1 cut(s)	936
Bpu10I	CCTNAGC	2 cut(s)	82, 94
BpuEI	CTTGAG	1 cut(s)	1101
Bsa29I	ATCGAT	2 cut(s)	671, 1368
BsaAI	YACGTR	1 cut(s)	1124
BsaHI	GRCGYC	1 cut(s)	1217
BsaJI	CCNNGG	5 cut(s)	514, 798, 1347, 1421, 1557
BsaWI	WCCGGW	2 cut(s)	701, 1090
Bsc4I	CCNNNNNNNGG	6 cut(s)	545, 691, 1006, 1007, 1175, 1244
Bse118I	RCCGGY	2 cut(s)	461, 527
Bse1I	ACTGG	5 cut(s)	907, 919, 1011, 1334, 1345
Bse3DI	GCAATG	1 cut(s)	269
BseAI	TCCGGA	1 cut(s)	1090
BseBI	CCWGG	2 cut(s)	458, 1569
BseCI	ATCGAT	2 cut(s)	671, 1368
BseDI	CCNNGG	5 cut(s)	514, 798, 1347, 1421, 1557
BseGI	GGATG	6 cut(s)	89, 210, 297, 393, 892, 1314
BseLI	CCNNNNNNNGG	6 cut(s)	545, 691, 1006, 1007, 1175, 1244
BseMI	GCAATG	1 cut(s)	269
BseMII	CTCAG	4 cut(s)	93, 96, 108, 1248
BseNI	ACTGG	5 cut(s)	907, 919, 1011, 1334, 1345
BseRI	GAGGAG	2 cut(s)	181, 726
BseSI	GKGCMC	2 cut(s)	648, 1129
BseXI	GCAGC	3 cut(s)	43, 1171, 1339
BseYI	CCCAGC	1 cut(s)	1295
Bsh1236I	CGCG	2 cut(s)	365, 759
BshFI	GGCC	4 cut(s)	296, 348, 461, 695
BshVI	ATCGAT	2 cut(s)	671, 1368
BsiHKAI	GWGCWC	2 cut(s)	310, 648
BsiHKCI	CYCGRG	1 cut(s)	1420
BsiSI	CCGG	4 cut(s)	462, 528, 702, 1091
BslFI	GGGAC	4 cut(s)	368, 746, 1096, 1346
BslI	CCNNNNNNNGG	6 cut(s)	545, 691, 1006, 1007, 1175, 1244
BsmAI	GTCTC	3 cut(s)	283, 437, 954
BsmBI	CGTCTC	1 cut(s)	283
BsmFI	GGGAC	4 cut(s)	368, 746, 1096, 1346
BsnI	GGCC	4 cut(s)	296, 348, 461, 695
BsoBI	CYCGRG	1 cut(s)	1420
Bsp1286I	GDGCHC	4 cut(s)	310, 648, 1129, 1421
Bsp13I	TCCGGA	1 cut(s)	1090
Bsp1407I	TGTACA	1 cut(s)	74
Bsp143I	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
Bsp19I	CCATGG	1 cut(s)	514
BspACI	CCGC	9 cut(s)	267, 342, 525, 570, 966, 1138, 1245, 1265, 1355
BspANI	GGCC	4 cut(s)	296, 348, 461, 695
BspCNI	CTCAG	4 cut(s)	94, 95, 107, 1249
BspDI	ATCGAT	2 cut(s)	671, 1368
BspEI	TCCGGA	1 cut(s)	1090
BspFNI	CGCG	2 cut(s)	365, 759
BspLI	GGNNCC	3 cut(s)	455, 715, 1345
BspPI	GGATC	2 cut(s)	1469, 1559
BsrDI	GCAATG	1 cut(s)	269
BsrFI	RCCGGY	2 cut(s)	461, 527
BsrGI	TGTACA	1 cut(s)	74
BsrI	ACTGG	5 cut(s)	907, 919, 1011, 1334, 1345
BssAI	RCCGGY	2 cut(s)	461, 527
BssECI	CCNNGG	5 cut(s)	514, 798, 1347, 1421, 1557
BssMI	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
BssNI	GRCGYC	1 cut(s)	1217
BssT1I	CCWWGG	3 cut(s)	514, 798, 1557
Bst2UI	CCWGG	2 cut(s)	458, 1569
Bst4CI	ACNGT	4 cut(s)	544, 772, 778, 830
Bst6I	CTCTTC	2 cut(s)	1492, 1611
BstACI	GRCGYC	1 cut(s)	1217
BstAUI	TGTACA	1 cut(s)	74
BstBAI	YACGTR	1 cut(s)	1124
BstC8I	GCNNGC	1 cut(s)	718
BstDEI	CTNAG	6 cut(s)	20, 82, 94, 102, 929, 1257
BstDSI	CCRYGG	1 cut(s)	514
BstF5I	GGATG	6 cut(s)	89, 210, 297, 393, 892, 1314
BstFNI	CGCG	2 cut(s)	365, 759
BstHHI	GCGC	1 cut(s)	365
BstKTI	GATC	7 cut(s)	664, 735, 747, 1206, 1450, 1464, 1567
BstMAI	GTCTC	3 cut(s)	283, 437, 954
BstMBI	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
BstMWI	GCNNNNNNNGC	4 cut(s)	31, 1094, 1262, 1271
BstNI	CCWGG	2 cut(s)	458, 1569
BstNSI	RCATGY	1 cut(s)	1632
BstSCI	CCNGG	2 cut(s)	456, 1567
BstSFI	CTRYAG	1 cut(s)	487
BstSLI	GKGCMC	2 cut(s)	648, 1129
BstUI	CGCG	2 cut(s)	365, 759
BstV1I	GCAGC	3 cut(s)	43, 1171, 1339
BstV2I	GAAGAC	2 cut(s)	658, 687
BstX2I	RGATCY	1 cut(s)	1447
BstYI	RGATCY	1 cut(s)	1447
Bsu15I	ATCGAT	2 cut(s)	671, 1368
BsuI	GTATCC	1 cut(s)	1607
BsuRI	GGCC	4 cut(s)	296, 348, 461, 695
BsuTUI	ATCGAT	2 cut(s)	671, 1368
BtgI	CCRYGG	1 cut(s)	514
BtrI	CACGTC	1 cut(s)	277
BtsCI	GGATG	6 cut(s)	89, 210, 297, 393, 892, 1314
BtsIMutI	CAGTG	1 cut(s)	571
Cac8I	GCNNGC	1 cut(s)	718
CaiI	CAGNNNCTG	1 cut(s)	101
CfoI	GCGC	1 cut(s)	365
Cfr10I	RCCGGY	2 cut(s)	461, 527
Cfr13I	GGNCC	5 cut(s)	155, 417, 454, 693, 1344
ClaI	ATCGAT	2 cut(s)	671, 1368
CseI	GACGC	5 cut(s)	354, 748, 1063, 1225, 1343
Csp6I	GTAC	6 cut(s)	75, 598, 755, 826, 1121, 1393
CviAII	CATG	7 cut(s)	284, 450, 515, 586, 883, 1396, 1629
CviQI	GTAC	6 cut(s)	75, 598, 755, 826, 1121, 1393
DdeI	CTNAG	6 cut(s)	20, 82, 94, 102, 929, 1257
DpnI	GATC	7 cut(s)	663, 734, 746, 1205, 1449, 1463, 1566
DpnII	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
DrdI	GACNNNNNNGTC	1 cut(s)	620
DseDI	GACNNNNNNGTC	1 cut(s)	620
Eam1104I	CTCTTC	2 cut(s)	1492, 1611
EarI	CTCTTC	2 cut(s)	1492, 1611
EciI	GGCGGA	1 cut(s)	1260
Eco130I	CCWWGG	3 cut(s)	514, 798, 1557
Eco24I	GRGCYC	1 cut(s)	1421
Eco47I	GGWCC	4 cut(s)	155, 417, 454, 1344
Eco57I	CTGAAG	2 cut(s)	399, 547
Eco88I	CYCGRG	1 cut(s)	1420
EcoRII	CCWGG	2 cut(s)	456, 1567
EcoT14I	CCWWGG	3 cut(s)	514, 798, 1557
EcoT38I	GRGCYC	1 cut(s)	1421
ErhI	CCWWGG	3 cut(s)	514, 798, 1557
Esp3I	CGTCTC	1 cut(s)	283
FaeI	CATG	7 cut(s)	287, 453, 518, 589, 886, 1399, 1632
FalI	AAGNNNNNCTT	4 cut(s)	305, 337, 587, 619
FaqI	GGGAC	4 cut(s)	368, 746, 1096, 1346
FatI	CATG	7 cut(s)	283, 449, 514, 585, 882, 1395, 1628
FauI	CCCGC	1 cut(s)	532
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	4 cut(s)	32, 1160, 1266, 1353
FokI	GGATG	6 cut(s)	76, 197, 284, 380, 899, 1321
FriOI	GRGCYC	1 cut(s)	1421
Fsp4HI	GCNGC	4 cut(s)	32, 1160, 1266, 1353
FspBI	CTAG	3 cut(s)	56, 1107, 1681
GlaI	GCGC	1 cut(s)	364
GluI	GCNGC	4 cut(s)	32, 1160, 1266, 1353
GsaI	CCCAGC	1 cut(s)	1299
GsuI	CTGGAG	1 cut(s)	936
HaeIII	GGCC	4 cut(s)	296, 348, 461, 695
HapII	CCGG	4 cut(s)	462, 528, 702, 1091
HgaI	GACGC	5 cut(s)	354, 748, 1063, 1225, 1343
HhaI	GCGC	1 cut(s)	365
Hin1I	GRCGYC	1 cut(s)	1217
Hin1II	CATG	7 cut(s)	287, 453, 518, 589, 886, 1399, 1632
Hin6I	GCGC	1 cut(s)	363
HinP1I	GCGC	1 cut(s)	363
HincII	GTYRAC	2 cut(s)	613, 1227
HindII	GTYRAC	2 cut(s)	613, 1227
HinfI	GANTC	9 cut(s)	203, 233, 519, 925, 962, 1049, 1300, 1399, 1643
HpaII	CCGG	4 cut(s)	462, 528, 702, 1091
HphI	GGTGA	5 cut(s)	137, 256, 691, 742, 1626
Hpy166II	GTNNAC	7 cut(s)	430, 484, 613, 646, 826, 1227, 1634
Hpy188I	TCNGA	7 cut(s)	215, 417, 1024, 1147, 1170, 1197, 1348
Hpy188III	TCNNGA	7 cut(s)	101, 659, 1063, 1091, 1107, 1306, 1451
Hpy8I	GTNNAC	7 cut(s)	430, 484, 613, 646, 826, 1227, 1634
Hpy99I	CGWCG	3 cut(s)	370, 626, 1057
HpyAV	CCTTC	4 cut(s)	150, 1414, 1441, 1648
HpyCH4III	ACNGT	4 cut(s)	544, 772, 778, 830
HpyCH4IV	ACGT	4 cut(s)	276, 426, 1123, 1152
HpyF10VI	GCNNNNNNNGC	4 cut(s)	31, 1094, 1262, 1271
HpyF3I	CTNAG	6 cut(s)	20, 82, 94, 102, 929, 1257
HpySE526I	ACGT	4 cut(s)	276, 426, 1123, 1152
Hsp92I	GRCGYC	1 cut(s)	1217
Hsp92II	CATG	7 cut(s)	287, 453, 518, 589, 886, 1399, 1632
HspAI	GCGC	1 cut(s)	363
Kpn2I	TCCGGA	1 cut(s)	1090
Kzo9I	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
LmnI	GCTCC	5 cut(s)	103, 141, 713, 1015, 1093
Lsp1109I	GCAGC	3 cut(s)	43, 1171, 1339
LweI	GCATC	2 cut(s)	616, 1277
MaeI	CTAG	3 cut(s)	56, 1107, 1681
MaeII	ACGT	4 cut(s)	276, 426, 1123, 1152
MaeIII	GTNAC	3 cut(s)	581, 772, 898
MalI	GATC	7 cut(s)	663, 734, 746, 1205, 1449, 1463, 1566
MboI	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
MflI	RGATCY	1 cut(s)	1447
MhlI	GDGCHC	4 cut(s)	310, 648, 1129, 1421
MluCI	AATT	9 cut(s)	15, 162, 333, 492, 1164, 1486, 1528, 1538, 1573
MluI	ACGCGT	1 cut(s)	757
MlyI	GAGTC	4 cut(s)	919, 956, 1393, 1637
MmeI	TCCRAC	2 cut(s)	532, 1125
MroI	TCCGGA	1 cut(s)	1090
MroXI	GAANNNNTTC	1 cut(s)	1385
MseI	TTAA	5 cut(s)	125, 408, 894, 1551, 1617
MslI	CAYNNNNRTG	1 cut(s)	564
MspI	CCGG	4 cut(s)	462, 528, 702, 1091
MspR9I	CCNGG	2 cut(s)	458, 1569
MvaI	CCWGG	2 cut(s)	458, 1569
MvnI	CGCG	2 cut(s)	365, 759
MwoI	GCNNNNNNNGC	4 cut(s)	31, 1094, 1262, 1271
NcoI	CCATGG	1 cut(s)	514
NdeII	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
NlaIII	CATG	7 cut(s)	287, 453, 518, 589, 886, 1399, 1632
NlaIV	GGNNCC	3 cut(s)	455, 715, 1345
NmeAIII	GCCGAG	1 cut(s)	453
NspI	RCATGY	1 cut(s)	1632
OliI	CACNNNNGTG	1 cut(s)	564
PciI	ACATGT	1 cut(s)	1628
PdmI	GAANNNNTTC	1 cut(s)	1385
PfeI	GAWTC	5 cut(s)	203, 233, 519, 1049, 1300
PflFI	GACNNNGTC	1 cut(s)	1151
PkrI	GCNGC	4 cut(s)	33, 1161, 1267, 1354
PleI	GAGTC	4 cut(s)	919, 956, 1393, 1637
PpsI	GAGTC	4 cut(s)	919, 956, 1393, 1637
Ppu21I	YACGTR	1 cut(s)	1124
PscI	ACATGT	1 cut(s)	1628
PshBI	ATTAAT	1 cut(s)	1617
PsiI	TTATAA	1 cut(s)	791
Psp6I	CCWGG	2 cut(s)	456, 1567
PspFI	CCCAGC	1 cut(s)	1295
PspGI	CCWGG	2 cut(s)	456, 1567
PspN4I	GGNNCC	3 cut(s)	455, 715, 1345
PspPI	GGNCC	5 cut(s)	155, 417, 454, 693, 1344
PstNI	CAGNNNCTG	1 cut(s)	101
PsuI	RGATCY	1 cut(s)	1447
PsyI	GACNNNGTC	1 cut(s)	1151
RsaI	GTAC	6 cut(s)	76, 599, 756, 827, 1122, 1394
RsaNI	GTAC	6 cut(s)	75, 598, 755, 826, 1121, 1393
RseI	CAYNNNNRTG	1 cut(s)	564
SaqAI	TTAA	5 cut(s)	125, 408, 894, 1551, 1617
SatI	GCNGC	4 cut(s)	32, 1160, 1266, 1353
Sau3AI	GATC	7 cut(s)	661, 732, 744, 1203, 1447, 1461, 1564
Sau96I	GGNCC	5 cut(s)	155, 417, 454, 693, 1344
SchI	GAGTC	4 cut(s)	919, 956, 1393, 1637
ScrFI	CCNGG	2 cut(s)	458, 1569
SduI	GDGCHC	4 cut(s)	310, 648, 1129, 1421
SfaNI	GCATC	2 cut(s)	616, 1277
SfcI	CTRYAG	1 cut(s)	487
SgrAI	CRCCGGYG	1 cut(s)	527
SinI	GGWCC	4 cut(s)	155, 417, 454, 1344
SmiMI	CAYNNNNRTG	1 cut(s)	564
SmlI	CTYRAG	1 cut(s)	1116
SmoI	CTYRAG	1 cut(s)	1116
Sse9I	AATT	9 cut(s)	15, 162, 333, 492, 1164, 1486, 1528, 1538, 1573
SsiI	CCGC	9 cut(s)	267, 342, 525, 570, 966, 1138, 1245, 1265, 1355
SspMI	CTAG	3 cut(s)	56, 1107, 1681
StyD4I	CCNGG	2 cut(s)	456, 1567
StyI	CCWWGG	3 cut(s)	514, 798, 1557
TaaI	ACNGT	4 cut(s)	544, 772, 778, 830
TaiI	ACGT	4 cut(s)	279, 429, 1126, 1155
TaqII	GACCGA	1 cut(s)	143
TasI	AATT	9 cut(s)	15, 162, 333, 492, 1164, 1486, 1528, 1538, 1573
TatI	WGTACW	2 cut(s)	74, 1392
TauI	GCSGC	1 cut(s)	1268
TfiI	GAWTC	5 cut(s)	203, 233, 519, 1049, 1300
Tru1I	TTAA	5 cut(s)	125, 408, 894, 1551, 1617
Tru9I	TTAA	5 cut(s)	125, 408, 894, 1551, 1617
TscAI	CASTG	1 cut(s)	571
TseI	GCWGC	3 cut(s)	31, 1159, 1352
TspDTI	ATGAA	5 cut(s)	78, 344, 382, 859, 1001
TspGWI	ACGGA	4 cut(s)	184, 212, 663, 970
TspRI	CASTG	1 cut(s)	571
Tth111I	GACNNNGTC	1 cut(s)	1151
VneI	GTGCAC	1 cut(s)	644
VpaK11BI	GGWCC	4 cut(s)	155, 417, 454, 1344
VspI	ATTAAT	1 cut(s)	1617
XapI	RAATTY	2 cut(s)	492, 1528
XbaI	TCTAGA	1 cut(s)	1106
XceI	RCATGY	1 cut(s)	1632
XcmI	CCANNNNNNNNNTGG	1 cut(s)	724
XmiI	GTMKAC	1 cut(s)	429
XmnI	GAANNNNTTC	1 cut(s)	1385
XspI	CTAG	3 cut(s)	56, 1107, 1681

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.