RchiOBHm_Chr6g0284881

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0007274
Physical Location & Seq
Reverse (-)
48178241 .. 48181407
3167 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25550

Sequence Viewer

Length: 1866 bp
ATGGACCGCGGCGGGGACAAGCAGCACCACCAGCAGCAGCAGCTCTCTTTGCCTAAGAGTGCAAGGCAGCAGCACAGATATAACGAATGGATTTTCCGGGATGTTCCAAGTGATATTACAATAGAAGTGAATGGAGGTGCTTTCTCACTGCATAAGTTCCCTCTTGTCTCTCGAAGTGGGCGCATCCGGAAGCTAGTAGCTGAACATAGAGATTCTGATATCTCAAGGGTGGAGCTTCTTAATCTACCAGGAGGCGCTGAAACATTTGAGTTGGCAGCGAAATTCTGTTATGGTATTAACTTTGAAATCACATCAGCAAATGTTGCGCAGCTGTGTTGTATATCCGATTTCCTTGAAATGACTGAAGAGTTCTCAAAAGATAATCTTGGCTCGCGTGCTGAAGAGTATCTCGAAAGCATTGTTTGCAAGAGTCTTGAAATGTGCGTTGAAGTTTTGCAACAATGTGAGACTTTACTTCCTCTAGCTGATGAGCTCAGAGTAATTAGCCGCTGCATAGATGCAATCGCCTCAAAGGCCTGCGTGGAGCAAATTGCTTCAAGCTTCTCCCGCTTGGAGTATAGCAGCTCAGGAAGGCTACACATGAACAGGCAAGCCAAATGTGATGGGGACTGGTGGATAGAAGATCTTTCTGGCCTCCGGGTTGACTTGTACCAAAGAGTCATAACAGCCATGAAGTGTCGTGGAGTCCGCCCCGAGAGTATCGGTGCATCTCTGATGAACTATGCTCAGAAGGAGTTGACAAAGAAGTCCAGCTTATGGAACCCACCTGGCCAGACAAAAGTTGATGTAATTTCAGTTTCAACTGCGCACGAAAAACTCGTAGTTGAAACGATTGTCAGCCTTCTTCCTGTTGAGAAACTTGCTGTTCCAATCAACTTCCTTTTCGGGCTTTTGCGAAGTGCAGTGATTCTTGATTGCACCGTTGCTTGCAGACTTGATCTGGAGAGGAGGATTGGGTCTCAGCTGGATATTGCTTCTCTTGATGATCTTCTGATACCATCTTTCAAGCACTCTGGTGATACTTTGTTTGATGTGGATACGGTGCATAGGATTTTAATTAACTTTTCTCAGCAAGAGGATAGTGAAGAAGAAGAAATGGAAGATGGTTCTGTTTTTGAATCTGATAGTCCCCATTCGCCTTCCCAAACCGCGCTTTTTAAGGTTTCAAAGTTAGTGGACAACTACCTTGCTGAGATTGCTCCTGATGCAAACCTCAAGCTCACTAAATTTCTAGTCATTGCTGATGCTTTGCCTGAACATGCACGAACTGTTCATGATGGGTTATATCGAGCCATAGACATCTATTTAAAAGCCCATCAAGGTTTATCAGATACTGACAAGAAGAAGCTCTGCAAACTAATCGATTTCCAAAAGCTCTCTCAAGAAGCCGGTGCACACGCTGCACAGAATGAGCGCCTCCCTCTCCAGTCGATAGTACAAGTTCTTTACTTTGAGCAATTAAGGCTCAGAAATTCCTTGGGCTGCTCTAATGGTGAAGACGAACACAAGCCAATGCACCAGTCATGGCGGATCAGCAGTGGTGCACTCAGTGCAGCAATGTCTCCTCGAGACAACTATGCATCATTGAGGCGAGAAAACCGTGAGCTAAAACTTGAGCTAGCTCGGCTACGAATGAGACTAAATGATCTTGAGAGAGAACATGTCTGTATGAAGAGAGATATGGAAAAGTCCAACTCCCGTAAATTTATGAGTTCTTTCTCCAAGAAAATTGGCAAGCTAAGCTTCTTTGGACATAGTTCTTCAAGGGCATCCACTTCTCCATCAAGACAATCATATAGAACGGATTCTAAGGTGATCGAAAGAACATGTGCAAGCATAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

621

Amino Acids

70.08

Weight (kDa)

6.26

Isoelectric Point (pI)

45.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 210 - 470 7.9e-95 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 766
Acc16I TGCGCA 2 cut(s) 327, 828
AccB7I CCANNNNNTGG 1 cut(s) 777
AccII CGCG 3 cut(s) 9, 394, 1172
AccIII TCCGGA 1 cut(s) 186
AciI CCGC 8 cut(s) 7, 9, 12, 508, 568, 709, 1170, 1549
AclWI GGATC 1 cut(s) 1559
AcoI YGGCCR 1 cut(s) 790
AcsI RAATTY 4 cut(s) 281, 1247, 1492, 1724
AcuI CTGAAG 2 cut(s) 384, 420
AdeI CACNNNGTG 1 cut(s) 1571
AfaI GTAC 2 cut(s) 671, 1458
AfiI CCNNNNNNNGG 2 cut(s) 13, 777
AflIII ACRYGT 2 cut(s) 1681, 1847
AjnI CCWGG 2 cut(s) 247, 787
AleI CACNNNNGTG 1 cut(s) 1035
Alw21I GWGCWC 3 cut(s) 495, 1417, 1567
Alw26I GTCTC 6 cut(s) 172, 461, 984, 1584, 1587, 1651
Alw44I GTGCAC 2 cut(s) 1413, 1563
AlwI GGATC 1 cut(s) 1559
AlwNI CAGNNNCTG 1 cut(s) 1355
Ama87I CYCGRG 2 cut(s) 713, 1587
Aor13HI TCCGGA 1 cut(s) 186
AoxI GGCC 3 cut(s) 534, 652, 790
ApaLI GTGCAC 2 cut(s) 1413, 1563
ApoI RAATTY 4 cut(s) 281, 1247, 1492, 1724
Asp700I GAANNNNTTC 1 cut(s) 1825
AspLEI GCGC 6 cut(s) 183, 257, 328, 829, 1174, 1437
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 2 cut(s) 98, 659
AsuHPI GGTGA 3 cut(s) 1049, 1526, 1846
AsuNHI GCTAGC 1 cut(s) 1639
AvaI CYCGRG 2 cut(s) 713, 1587
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 2 cut(s) 1417, 1567
BalI TGGCCA 1 cut(s) 792
BanII GRGCYC 1 cut(s) 495
BbsI GAAGAC 1 cut(s) 1524
Bbv12I GWGCWC 3 cut(s) 495, 1417, 1567
BccI CCATC 6 cut(s) 617, 1027, 1118, 1292, 1344, 1810
BcgI CGANNNNNNTGC 2 cut(s) 1363, 1397
BciT130I CCWGG 2 cut(s) 249, 789
BciVI GTATCC 1 cut(s) 1051
BcnI CCSGG 2 cut(s) 98, 659
BcoDI GTCTC 6 cut(s) 172, 461, 984, 1584, 1587, 1651
BfaI CTAG 4 cut(s) 194, 482, 1253, 1640
BfoI RGCGCY 2 cut(s) 258, 1438
BfuI GTATCC 1 cut(s) 1051
BglI GCCNNNNNGGC 1 cut(s) 533
BglII AGATCT 1 cut(s) 643
BlpI GCTNAGC 1 cut(s) 1760
Bme1390I CCNGG 4 cut(s) 98, 249, 659, 789
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 2 cut(s) 713, 1587
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 782
BmrFI CCNGG 4 cut(s) 98, 249, 659, 789
BmsI GCATC 7 cut(s) 192, 508, 737, 1216, 1255, 1610, 1799
BmtI GCTAGC 1 cut(s) 1643
BpiI GAAGAC 1 cut(s) 1524
BpmI CTGGAG 2 cut(s) 983, 1430
Bpu10I CCTNAGC 1 cut(s) 586
Bpu1102I GCTNAGC 1 cut(s) 1760
BpuEI CTTGAG 5 cut(s) 208, 1220, 1386, 1655, 1691
BpuMI CCSGG 2 cut(s) 98, 659
Bsa29I ATCGAT 1 cut(s) 1383
BsaI GGTCTC 1 cut(s) 984
BsaJI CCNNGG 2 cut(s) 7, 1497
BsaWI WCCGGW 1 cut(s) 186
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 777
Bse118I RCCGGY 1 cut(s) 1409
Bse1I ACTGG 3 cut(s) 635, 1447, 1540
Bse3DI GCAATG 2 cut(s) 1257, 1584
BseAI TCCGGA 1 cut(s) 186
BseBI CCWGG 2 cut(s) 249, 789
BseCI ATCGAT 1 cut(s) 1383
BseDI CCNNGG 2 cut(s) 7, 1497
BseGI GGATG 3 cut(s) 106, 183, 1790
BseLI CCNNNNNNNGG 2 cut(s) 13, 777
BseMI GCAATG 2 cut(s) 1257, 1584
BseMII CTCAG 8 cut(s) 508, 600, 761, 995, 1103, 1203, 1501, 1582
BseNI ACTGG 3 cut(s) 635, 1447, 1540
BseRI GAGGAG 2 cut(s) 982, 1575
BseSI GKGCMC 2 cut(s) 1417, 1567
BsgI GTGCAG 3 cut(s) 942, 1407, 1593
Bsh1236I CGCG 3 cut(s) 9, 394, 1172
BshFI GGCC 3 cut(s) 536, 654, 792
BshVI ATCGAT 1 cut(s) 1383
BsiHKAI GWGCWC 3 cut(s) 495, 1417, 1567
BsiHKCI CYCGRG 2 cut(s) 713, 1587
BsiSI CCGG 4 cut(s) 97, 187, 658, 1410
BslFI GGGAC 3 cut(s) 29, 641, 1134
BslI CCNNNNNNNGG 2 cut(s) 13, 777
BsmAI GTCTC 6 cut(s) 172, 461, 984, 1584, 1587, 1651
BsmFI GGGAC 3 cut(s) 29, 641, 1134
BsnI GGCC 3 cut(s) 536, 654, 792
Bso31I GGTCTC 1 cut(s) 984
BsoBI CYCGRG 2 cut(s) 713, 1587
Bsp1286I GDGCHC 3 cut(s) 495, 1417, 1567
Bsp13I TCCGGA 1 cut(s) 186
Bsp143I GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
Bsp1720I GCTNAGC 1 cut(s) 1760
BspACI CCGC 8 cut(s) 7, 9, 12, 508, 568, 709, 1170, 1549
BspANI GGCC 3 cut(s) 536, 654, 792
BspCNI CTCAG 8 cut(s) 507, 599, 760, 994, 1102, 1204, 1500, 1581
BspDI ATCGAT 1 cut(s) 1383
BspEI TCCGGA 1 cut(s) 186
BspFNI CGCG 3 cut(s) 9, 394, 1172
BspHI TCATGA 1 cut(s) 1294
BspLI GGNNCC 1 cut(s) 782
BspOI GCTAGC 1 cut(s) 1643
BspPI GGATC 1 cut(s) 1559
BspTNI GGTCTC 1 cut(s) 984
BsrDI GCAATG 2 cut(s) 1257, 1584
BsrFI RCCGGY 1 cut(s) 1409
BsrI ACTGG 3 cut(s) 635, 1447, 1540
BssAI RCCGGY 1 cut(s) 1409
BssECI CCNNGG 2 cut(s) 7, 1497
BssMI GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
BssT1I CCWWGG 1 cut(s) 1497
Bst2UI CCWGG 2 cut(s) 249, 789
Bst4CI ACNGT 4 cut(s) 943, 1063, 1291, 1622
Bst6I CTCTTC 3 cut(s) 360, 396, 1688
BstAPI GCANNNNNTGC 4 cut(s) 323, 423, 1421, 1571
BstC8I GCNNGC 8 cut(s) 392, 396, 538, 612, 949, 1641, 1757, 1855
BstDSI CCRYGG 1 cut(s) 7
BstF5I GGATG 3 cut(s) 106, 183, 1790
BstFNI CGCG 3 cut(s) 9, 394, 1172
BstH2I RGCGCY 2 cut(s) 258, 1438
BstHHI GCGC 6 cut(s) 183, 257, 328, 829, 1174, 1437
BstKTI GATC 6 cut(s) 646, 961, 1009, 1554, 1669, 1839
BstMAI GTCTC 6 cut(s) 172, 461, 984, 1584, 1587, 1651
BstMBI GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
BstNI CCWGG 2 cut(s) 249, 789
BstNSI RCATGY 3 cut(s) 1283, 1685, 1851
BstSCI CCNGG 4 cut(s) 96, 247, 657, 787
BstSLI GKGCMC 2 cut(s) 1417, 1567
BstUI CGCG 3 cut(s) 9, 394, 1172
BstV2I GAAGAC 1 cut(s) 1524
BstX2I RGATCY 1 cut(s) 643
BstYI RGATCY 1 cut(s) 643
Bsu15I ATCGAT 1 cut(s) 1383
BsuI GTATCC 1 cut(s) 1051
BsuRI GGCC 3 cut(s) 536, 654, 792
BsuTUI ATCGAT 1 cut(s) 1383
BtgI CCRYGG 1 cut(s) 7
BtsCI GGATG 3 cut(s) 106, 183, 1790
BtsI GCAGTG 3 cut(s) 146, 930, 1564
BtsIMutI CAGTG 4 cut(s) 146, 930, 1564, 1576
Cac8I GCNNGC 8 cut(s) 392, 396, 538, 612, 949, 1641, 1757, 1855
CaiI CAGNNNCTG 1 cut(s) 1355
CciI TCATGA 1 cut(s) 1294
CfoI GCGC 6 cut(s) 183, 257, 328, 829, 1174, 1437
Cfr10I RCCGGY 1 cut(s) 1409
Cfr13I GGNCC 1 cut(s) 4
Cfr42I CCGCGG 1 cut(s) 10
ClaI ATCGAT 1 cut(s) 1383
Csp6I GTAC 2 cut(s) 670, 1457
CspCI CAANNNNNGTGG 2 cut(s) 1176, 1211
CviAII CATG 7 cut(s) 601, 691, 1280, 1295, 1545, 1682, 1848
CviQI GTAC 2 cut(s) 670, 1457
DpnI GATC 6 cut(s) 645, 960, 1008, 1553, 1668, 1838
DpnII GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
DraI TTTAAA 1 cut(s) 1329
DraIII CACNNNGTG 1 cut(s) 1571
DrdI GACNNNNNNGTC 1 cut(s) 766
DseDI GACNNNNNNGTC 1 cut(s) 766
EaeI YGGCCR 1 cut(s) 790
Eam1104I CTCTTC 3 cut(s) 360, 396, 1688
EarI CTCTTC 3 cut(s) 360, 396, 1688
EciI GGCGGA 2 cut(s) 698, 1564
Ecl136II GAGCTC 1 cut(s) 493
Eco130I CCWWGG 1 cut(s) 1497
Eco147I AGGCCT 1 cut(s) 536
Eco24I GRGCYC 1 cut(s) 495
Eco31I GGTCTC 1 cut(s) 984
Eco32I GATATC 1 cut(s) 220
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 493
Eco57I CTGAAG 2 cut(s) 384, 420
Eco88I CYCGRG 2 cut(s) 713, 1587
EcoICRI GAGCTC 1 cut(s) 493
EcoRII CCWGG 2 cut(s) 247, 787
EcoRV GATATC 1 cut(s) 220
EcoT14I CCWWGG 1 cut(s) 1497
EcoT22I ATGCAT 1 cut(s) 1603
EcoT38I GRGCYC 1 cut(s) 495
ErhI CCWWGG 1 cut(s) 1497
FaeI CATG 7 cut(s) 604, 694, 1283, 1298, 1548, 1685, 1851
FalI AAGNNNNNCTT 6 cut(s) 369, 401, 758, 790, 1748, 1780
FaqI GGGAC 3 cut(s) 29, 641, 1134
FatI CATG 7 cut(s) 600, 690, 1279, 1294, 1544, 1681, 1847
FauI CCCGC 2 cut(s) 5, 575
FokI GGATG 3 cut(s) 113, 170, 1777
FriOI GRGCYC 1 cut(s) 495
FspBI CTAG 4 cut(s) 194, 482, 1253, 1640
FspI TGCGCA 2 cut(s) 327, 828
GlaI GCGC 6 cut(s) 182, 256, 327, 828, 1173, 1436
GsuI CTGGAG 2 cut(s) 983, 1430
HaeII RGCGCY 2 cut(s) 258, 1438
HaeIII GGCC 3 cut(s) 536, 654, 792
HapII CCGG 4 cut(s) 97, 187, 658, 1410
HhaI GCGC 6 cut(s) 183, 257, 328, 829, 1174, 1437
Hin1II CATG 7 cut(s) 604, 694, 1283, 1298, 1548, 1685, 1851
Hin6I GCGC 6 cut(s) 181, 255, 326, 827, 1172, 1435
HinP1I GCGC 6 cut(s) 181, 255, 326, 827, 1172, 1435
HincII GTYRAC 2 cut(s) 664, 759
HindII GTYRAC 2 cut(s) 664, 759
HindIII AAGCTT 2 cut(s) 559, 1762
HinfI GANTC 7 cut(s) 212, 430, 678, 705, 928, 1139, 1826
HpaII CCGG 4 cut(s) 97, 187, 658, 1410
HphI GGTGA 3 cut(s) 1049, 1526, 1846
Hpy166II GTNNAC 5 cut(s) 664, 759, 1198, 1415, 1565
Hpy188I TCNGA 9 cut(s) 217, 346, 497, 735, 750, 1014, 1144, 1351, 1490
Hpy8I GTNNAC 5 cut(s) 664, 759, 1198, 1415, 1565
HpyAV CCTTC 4 cut(s) 585, 745, 872, 1170
HpyCH4III ACNGT 4 cut(s) 943, 1063, 1291, 1622
Hsp92II CATG 7 cut(s) 604, 694, 1283, 1298, 1548, 1685, 1851
HspAI GCGC 6 cut(s) 181, 255, 326, 827, 1172, 1435
Kpn2I TCCGGA 1 cut(s) 186
KspI CCGCGG 1 cut(s) 10
Kzo9I GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
LmnI GCTCC 3 cut(s) 232, 544, 1225
LweI GCATC 7 cut(s) 192, 508, 737, 1216, 1255, 1610, 1799
MaeI CTAG 4 cut(s) 194, 482, 1253, 1640
MalI GATC 6 cut(s) 645, 960, 1008, 1553, 1668, 1838
MboI GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
MflI RGATCY 1 cut(s) 643
MhlI GDGCHC 3 cut(s) 495, 1417, 1567
MlsI TGGCCA 1 cut(s) 792
MluNI TGGCCA 1 cut(s) 792
MlyI GAGTC 3 cut(s) 439, 687, 714
MmeI TCCRAC 1 cut(s) 1737
Mox20I TGGCCA 1 cut(s) 792
Mph1103I ATGCAT 1 cut(s) 1603
MroI TCCGGA 1 cut(s) 186
MroXI GAANNNNTTC 1 cut(s) 1825
MscI TGGCCA 1 cut(s) 792
MseI TTAA 7 cut(s) 240, 297, 1076, 1080, 1179, 1328, 1481
MslI CAYNNNNRTG 1 cut(s) 1035
Msp20I TGGCCA 1 cut(s) 792
MspA1I CMGCKG 4 cut(s) 9, 331, 510, 985
MspI CCGG 4 cut(s) 97, 187, 658, 1410
MspR9I CCNGG 4 cut(s) 98, 249, 659, 789
MvaI CCWGG 2 cut(s) 249, 789
MvnI CGCG 3 cut(s) 9, 394, 1172
NciI CCSGG 2 cut(s) 98, 659
NdeII GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
NheI GCTAGC 1 cut(s) 1639
NlaIII CATG 7 cut(s) 604, 694, 1283, 1298, 1548, 1685, 1851
NlaIV GGNNCC 1 cut(s) 782
NmeAIII GCCGAG 1 cut(s) 1624
NsbI TGCGCA 2 cut(s) 327, 828
NsiI ATGCAT 1 cut(s) 1603
NspI RCATGY 3 cut(s) 1283, 1685, 1851
OliI CACNNNNGTG 1 cut(s) 1035
PacI TTAATTAA 1 cut(s) 1080
PaeR7I CTCGAG 1 cut(s) 1587
PagI TCATGA 1 cut(s) 1294
PceI AGGCCT 1 cut(s) 536
PciI ACATGT 2 cut(s) 1681, 1847
PcsI WCGNNNNNNNCGW 1 cut(s) 837
PdmI GAANNNNTTC 1 cut(s) 1825
PfeI GAWTC 4 cut(s) 212, 928, 1139, 1826
PflMI CCANNNNNTGG 1 cut(s) 777
PfoI TCCNGGA 1 cut(s) 96
PleI GAGTC 3 cut(s) 438, 686, 713
PpsI GAGTC 3 cut(s) 438, 686, 713
PscI ACATGT 2 cut(s) 1681, 1847
Psp124BI GAGCTC 1 cut(s) 495
Psp6I CCWGG 2 cut(s) 247, 787
PspGI CCWGG 2 cut(s) 247, 787
PspN4I GGNNCC 1 cut(s) 782
PspPI GGNCC 1 cut(s) 4
PstNI CAGNNNCTG 1 cut(s) 1355
PsuI RGATCY 1 cut(s) 643
PvuII CAGCTG 2 cut(s) 331, 985
RsaI GTAC 2 cut(s) 671, 1458
RsaNI GTAC 2 cut(s) 670, 1457
RseI CAYNNNNRTG 1 cut(s) 1035
SacI GAGCTC 1 cut(s) 495
SacII CCGCGG 1 cut(s) 10
SaqAI TTAA 7 cut(s) 240, 297, 1076, 1080, 1179, 1328, 1481
Sau3AI GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 3 cut(s) 439, 687, 714
ScrFI CCNGG 4 cut(s) 98, 249, 659, 789
SduI GDGCHC 3 cut(s) 495, 1417, 1567
SfaNI GCATC 7 cut(s) 192, 508, 737, 1216, 1255, 1610, 1799
Sfr274I CTCGAG 1 cut(s) 1587
Sfr303I CCGCGG 1 cut(s) 10
SgrBI CCGCGG 1 cut(s) 10
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 1587
SmiMI CAYNNNNRTG 1 cut(s) 1035
SmlI CTYRAG 6 cut(s) 223, 1235, 1401, 1587, 1634, 1670
SmoI CTYRAG 6 cut(s) 223, 1235, 1401, 1587, 1634, 1670
SseBI AGGCCT 1 cut(s) 536
SsiI CCGC 8 cut(s) 7, 9, 12, 508, 568, 709, 1170, 1549
SspMI CTAG 4 cut(s) 194, 482, 1253, 1640
SstI GAGCTC 1 cut(s) 495
StuI AGGCCT 1 cut(s) 536
StyD4I CCNGG 4 cut(s) 96, 247, 657, 787
StyI CCWWGG 1 cut(s) 1497
TaaI ACNGT 4 cut(s) 943, 1063, 1291, 1622
TaqI TCGA 7 cut(s) 172, 411, 1309, 1383, 1451, 1588, 1839
TatI WGTACW 1 cut(s) 1456
TauI GCSGC 2 cut(s) 12, 510
TfiI GAWTC 4 cut(s) 212, 928, 1139, 1826
Tru1I TTAA 7 cut(s) 240, 297, 1076, 1080, 1179, 1328, 1481
Tru9I TTAA 7 cut(s) 240, 297, 1076, 1080, 1179, 1328, 1481
TscAI CASTG 4 cut(s) 153, 930, 1564, 1576
TspDTI ATGAA 5 cut(s) 617, 707, 752, 1283, 1706
TspGWI ACGGA 1 cut(s) 1838
TspRI CASTG 4 cut(s) 153, 930, 1564, 1576
Van91I CCANNNNNTGG 1 cut(s) 777
VneI GTGCAC 2 cut(s) 1413, 1563
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 4 cut(s) 281, 1247, 1492, 1724
XceI RCATGY 3 cut(s) 1283, 1685, 1851
XhoI CTCGAG 1 cut(s) 1587
XmnI GAANNNNTTC 1 cut(s) 1825
XspI CTAG 4 cut(s) 194, 482, 1253, 1640
Zsp2I ATGCAT 1 cut(s) 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.