Belongs to the NPH3 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G48800 |
| fragaria_vesca | FvH4_2g19060 FvH4_2g19060 FvH4_2g19060 FvH4_2g19060 |
| malus_domestica | MD05G1175400.v1.1 MD10G1164500.v1.1 |
| prunus_persica | Prupe.8G203100_v2.0.a1 |
| pyrus_communis | pycom05g16220 pycom10g14180 |
| rosa_chinensis | RchiOBHm_Chr6g0284881 |
| rosa_laevigata | RLG00000012705 |
| rosa_multiflora | Rmu_co8481861.1_g000001 Rmu_sc0000686.1_g000019 |
| rosa_roxburghii | Rroxscaffold_7G00184270 |
| rosa_rugosa | Rorug06G0167700 Rorug06G0167800 Rorug06G0167900 Rorug06G0167900 Rorug06G0168000 |
| rosa_samantha | Rh6AG280300 Rh6BG280600 Rh6CG282600 Rh6DG275700 |
| rosa_wichuraiana | Rw6G024090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 328 |
| Acc16I | TGCGCA | 1 cut(s) | 390 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 339 |
| AciI | CCGC | 4 cut(s) | 70, 130, 271, 1111 |
| AclWI | GGATC | 1 cut(s) | 1121 |
| AcoI | YGGCCR | 1 cut(s) | 352 |
| AcsI | RAATTY | 3 cut(s) | 809, 1054, 1286 |
| AdeI | CACNNNGTG | 1 cut(s) | 1133 |
| AfaI | GTAC | 2 cut(s) | 233, 1020 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 339 |
| AflIII | ACRYGT | 2 cut(s) | 1243, 1409 |
| AgsI | TTSAA | 8 cut(s) | 11, 120, 384, 410, 589, 701, 750, 1347 |
| AjnI | CCWGG | 1 cut(s) | 349 |
| AleI | CACNNNNGTG | 1 cut(s) | 597 |
| Alw21I | GWGCWC | 3 cut(s) | 57, 979, 1129 |
| Alw26I | GTCTC | 5 cut(s) | 23, 546, 1146, 1149, 1213 |
| Alw44I | GTGCAC | 2 cut(s) | 975, 1125 |
| AlwI | GGATC | 1 cut(s) | 1121 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 917 |
| Ama87I | CYCGRG | 2 cut(s) | 275, 1149 |
| AoxI | GGCC | 3 cut(s) | 96, 214, 352 |
| ApaLI | GTGCAC | 2 cut(s) | 975, 1125 |
| ApeKI | GCWGC | 5 cut(s) | 72, 144, 983, 1065, 1136 |
| ApoI | RAATTY | 3 cut(s) | 809, 1054, 1286 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1387 |
| AspLEI | GCGC | 3 cut(s) | 391, 736, 999 |
| AsuC2I | CCSGG | 1 cut(s) | 221 |
| AsuHPI | GGTGA | 3 cut(s) | 611, 1088, 1408 |
| AsuNHI | GCTAGC | 1 cut(s) | 1201 |
| AvaI | CYCGRG | 2 cut(s) | 275, 1149 |
| BaeGI | GKGCMC | 2 cut(s) | 979, 1129 |
| BalI | TGGCCA | 1 cut(s) | 354 |
| BanII | GRGCYC | 1 cut(s) | 57 |
| BauI | CACGAG | 1 cut(s) | 401 |
| BbsI | GAAGAC | 1 cut(s) | 1086 |
| Bbv12I | GWGCWC | 3 cut(s) | 57, 979, 1129 |
| BbvI | GCAGC | 5 cut(s) | 59, 156, 970, 1052, 1148 |
| BccI | CCATC | 6 cut(s) | 179, 589, 680, 854, 906, 1372 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 925, 959 |
| BciT130I | CCWGG | 1 cut(s) | 351 |
| BciVI | GTATCC | 1 cut(s) | 613 |
| BcnI | CCSGG | 1 cut(s) | 221 |
| BcoDI | GTCTC | 5 cut(s) | 23, 546, 1146, 1149, 1213 |
| BfaI | CTAG | 3 cut(s) | 44, 815, 1202 |
| BfoI | RGCGCY | 1 cut(s) | 1000 |
| BfuI | GTATCC | 1 cut(s) | 613 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 95 |
| BglII | AGATCT | 1 cut(s) | 205 |
| BisI | GCNGC | 6 cut(s) | 70, 73, 145, 984, 1066, 1137 |
| BlpI | GCTNAGC | 1 cut(s) | 1322 |
| BlsI | GCNGC | 6 cut(s) | 71, 74, 146, 985, 1067, 1138 |
| Bme1390I | CCNGG | 2 cut(s) | 221, 351 |
| BmeT110I | CYCGRG | 2 cut(s) | 275, 1149 |
| BmiI | GGNNCC | 1 cut(s) | 344 |
| BmrFI | CCNGG | 2 cut(s) | 221, 351 |
| BmsI | GCATC | 6 cut(s) | 70, 299, 778, 817, 1172, 1361 |
| BmtI | GCTAGC | 1 cut(s) | 1205 |
| BoxI | GACNNNNGTC | 1 cut(s) | 362 |
| BpiI | GAAGAC | 1 cut(s) | 1086 |
| BpmI | CTGGAG | 2 cut(s) | 545, 992 |
| Bpu10I | CCTNAGC | 1 cut(s) | 148 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1322 |
| BpuEI | CTTGAG | 4 cut(s) | 782, 948, 1217, 1253 |
| BpuMI | CCSGG | 1 cut(s) | 221 |
| Bsa29I | ATCGAT | 1 cut(s) | 945 |
| BsaBI | GATNNNNATC | 1 cut(s) | 638 |
| BsaI | GGTCTC | 1 cut(s) | 546 |
| BsaJI | CCNNGG | 1 cut(s) | 1059 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 339 |
| Bse118I | RCCGGY | 1 cut(s) | 971 |
| Bse1I | ACTGG | 3 cut(s) | 197, 1009, 1102 |
| Bse3DI | GCAATG | 2 cut(s) | 819, 1146 |
| Bse8I | GATNNNNATC | 1 cut(s) | 638 |
| BseBI | CCWGG | 1 cut(s) | 351 |
| BseCI | ATCGAT | 1 cut(s) | 945 |
| BseDI | CCNNGG | 1 cut(s) | 1059 |
| BseGI | GGATG | 1 cut(s) | 1352 |
| BseJI | GATNNNNATC | 1 cut(s) | 638 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 339 |
| BseMI | GCAATG | 2 cut(s) | 819, 1146 |
| BseMII | CTCAG | 7 cut(s) | 70, 162, 323, 557, 665, 1063, 1144 |
| BseNI | ACTGG | 3 cut(s) | 197, 1009, 1102 |
| BseRI | GAGGAG | 2 cut(s) | 544, 1137 |
| BseSI | GKGCMC | 2 cut(s) | 979, 1129 |
| BseXI | GCAGC | 5 cut(s) | 59, 156, 970, 1052, 1148 |
| BsgI | GTGCAG | 3 cut(s) | 504, 969, 1155 |
| BshFI | GGCC | 3 cut(s) | 98, 216, 354 |
| BshVI | ATCGAT | 1 cut(s) | 945 |
| BsiHKAI | GWGCWC | 3 cut(s) | 57, 979, 1129 |
| BsiHKCI | CYCGRG | 2 cut(s) | 275, 1149 |
| BsiSI | CCGG | 2 cut(s) | 220, 972 |
| BslFI | GGGAC | 1 cut(s) | 203 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 339 |
| BsmAI | GTCTC | 5 cut(s) | 23, 546, 1146, 1149, 1213 |
| BsmFI | GGGAC | 1 cut(s) | 203 |
| BsnI | GGCC | 3 cut(s) | 98, 216, 354 |
| Bso31I | GGTCTC | 1 cut(s) | 546 |
| BsoBI | CYCGRG | 2 cut(s) | 275, 1149 |
| Bsp1286I | GDGCHC | 3 cut(s) | 57, 979, 1129 |
| Bsp143I | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1322 |
| BspACI | CCGC | 4 cut(s) | 70, 130, 271, 1111 |
| BspANI | GGCC | 3 cut(s) | 98, 216, 354 |
| BspCNI | CTCAG | 7 cut(s) | 69, 161, 322, 556, 664, 1062, 1143 |
| BspDI | ATCGAT | 1 cut(s) | 945 |
| BspHI | TCATGA | 1 cut(s) | 856 |
| BspLI | GGNNCC | 1 cut(s) | 344 |
| BspOI | GCTAGC | 1 cut(s) | 1205 |
| BspPI | GGATC | 1 cut(s) | 1121 |
| BspTNI | GGTCTC | 1 cut(s) | 546 |
| BsrDI | GCAATG | 2 cut(s) | 819, 1146 |
| BsrFI | RCCGGY | 1 cut(s) | 971 |
| BsrI | ACTGG | 3 cut(s) | 197, 1009, 1102 |
| BssAI | RCCGGY | 1 cut(s) | 971 |
| BssECI | CCNNGG | 1 cut(s) | 1059 |
| BssMI | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| BssSI | CACGAG | 1 cut(s) | 401 |
| BssT1I | CCWWGG | 1 cut(s) | 1059 |
| Bst2BI | CACGAG | 1 cut(s) | 401 |
| Bst2UI | CCWGG | 1 cut(s) | 351 |
| Bst4CI | ACNGT | 4 cut(s) | 505, 625, 853, 1184 |
| Bst6I | CTCTTC | 1 cut(s) | 1250 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 983, 1133 |
| BstC8I | GCNNGC | 6 cut(s) | 100, 174, 511, 1203, 1319, 1417 |
| BstDEI | CTNAG | 9 cut(s) | 56, 148, 309, 543, 651, 1049, 1130, 1322, 1392 |
| BstF5I | GGATG | 1 cut(s) | 1352 |
| BstH2I | RGCGCY | 1 cut(s) | 1000 |
| BstHHI | GCGC | 3 cut(s) | 391, 736, 999 |
| BstKTI | GATC | 6 cut(s) | 208, 523, 571, 1116, 1231, 1401 |
| BstMAI | GTCTC | 5 cut(s) | 23, 546, 1146, 1149, 1213 |
| BstMBI | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 95, 129, 779, 788, 983, 1045, 1133, 1207, 1323 |
| BstNI | CCWGG | 1 cut(s) | 351 |
| BstNSI | RCATGY | 3 cut(s) | 845, 1247, 1413 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 362 |
| BstSCI | CCNGG | 2 cut(s) | 219, 349 |
| BstSLI | GKGCMC | 2 cut(s) | 979, 1129 |
| BstV1I | GCAGC | 5 cut(s) | 59, 156, 970, 1052, 1148 |
| BstV2I | GAAGAC | 1 cut(s) | 1086 |
| BstX2I | RGATCY | 1 cut(s) | 205 |
| BstYI | RGATCY | 1 cut(s) | 205 |
| Bsu15I | ATCGAT | 1 cut(s) | 945 |
| BsuI | GTATCC | 1 cut(s) | 613 |
| BsuRI | GGCC | 3 cut(s) | 98, 216, 354 |
| BsuTUI | ATCGAT | 1 cut(s) | 945 |
| BtsCI | GGATG | 1 cut(s) | 1352 |
| BtsI | GCAGTG | 2 cut(s) | 492, 1126 |
| BtsIMutI | CAGTG | 3 cut(s) | 492, 1126, 1138 |
| Cac8I | GCNNGC | 6 cut(s) | 100, 174, 511, 1203, 1319, 1417 |
| CaiI | CAGNNNCTG | 1 cut(s) | 917 |
| CciI | TCATGA | 1 cut(s) | 856 |
| CfoI | GCGC | 3 cut(s) | 391, 736, 999 |
| Cfr10I | RCCGGY | 1 cut(s) | 971 |
| ClaI | ATCGAT | 1 cut(s) | 945 |
| Csp6I | GTAC | 2 cut(s) | 232, 1019 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 738, 773 |
| CviAII | CATG | 7 cut(s) | 163, 253, 842, 857, 1107, 1244, 1410 |
| CviQI | GTAC | 2 cut(s) | 232, 1019 |
| DdeI | CTNAG | 9 cut(s) | 56, 148, 309, 543, 651, 1049, 1130, 1322, 1392 |
| DpnI | GATC | 6 cut(s) | 207, 522, 570, 1115, 1230, 1400 |
| DpnII | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| DraI | TTTAAA | 1 cut(s) | 891 |
| DraIII | CACNNNGTG | 1 cut(s) | 1133 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 328 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 328 |
| EaeI | YGGCCR | 1 cut(s) | 352 |
| Eam1104I | CTCTTC | 1 cut(s) | 1250 |
| EarI | CTCTTC | 1 cut(s) | 1250 |
| EciI | GGCGGA | 2 cut(s) | 260, 1126 |
| Ecl136II | GAGCTC | 1 cut(s) | 55 |
| Eco130I | CCWWGG | 1 cut(s) | 1059 |
| Eco147I | AGGCCT | 1 cut(s) | 98 |
| Eco24I | GRGCYC | 1 cut(s) | 57 |
| Eco31I | GGTCTC | 1 cut(s) | 546 |
| Eco53kI | GAGCTC | 1 cut(s) | 55 |
| Eco88I | CYCGRG | 2 cut(s) | 275, 1149 |
| EcoICRI | GAGCTC | 1 cut(s) | 55 |
| EcoRII | CCWGG | 1 cut(s) | 349 |
| EcoT14I | CCWWGG | 1 cut(s) | 1059 |
| EcoT22I | ATGCAT | 1 cut(s) | 1165 |
| EcoT38I | GRGCYC | 1 cut(s) | 57 |
| ErhI | CCWWGG | 1 cut(s) | 1059 |
| FaeI | CATG | 7 cut(s) | 166, 256, 845, 860, 1110, 1247, 1413 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 320, 352, 1310, 1342 |
| FaqI | GGGAC | 1 cut(s) | 203 |
| FatI | CATG | 7 cut(s) | 162, 252, 841, 856, 1106, 1243, 1409 |
| FauI | CCCGC | 1 cut(s) | 137 |
| Fnu4HI | GCNGC | 6 cut(s) | 70, 73, 145, 984, 1066, 1137 |
| FokI | GGATG | 1 cut(s) | 1339 |
| FriOI | GRGCYC | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 6 cut(s) | 70, 73, 145, 984, 1066, 1137 |
| FspBI | CTAG | 3 cut(s) | 44, 815, 1202 |
| FspI | TGCGCA | 1 cut(s) | 390 |
| GlaI | GCGC | 3 cut(s) | 390, 735, 998 |
| GluI | GCNGC | 6 cut(s) | 70, 73, 145, 984, 1066, 1137 |
| GsuI | CTGGAG | 2 cut(s) | 545, 992 |
| HaeII | RGCGCY | 1 cut(s) | 1000 |
| HaeIII | GGCC | 3 cut(s) | 98, 216, 354 |
| HapII | CCGG | 2 cut(s) | 220, 972 |
| HhaI | GCGC | 3 cut(s) | 391, 736, 999 |
| Hin1II | CATG | 7 cut(s) | 166, 256, 845, 860, 1110, 1247, 1413 |
| Hin6I | GCGC | 3 cut(s) | 389, 734, 997 |
| HinP1I | GCGC | 3 cut(s) | 389, 734, 997 |
| HincII | GTYRAC | 2 cut(s) | 226, 321 |
| HindII | GTYRAC | 2 cut(s) | 226, 321 |
| HindIII | AAGCTT | 3 cut(s) | 121, 956, 1324 |
| HinfI | GANTC | 5 cut(s) | 240, 267, 490, 701, 1388 |
| HpaII | CCGG | 2 cut(s) | 220, 972 |
| HphI | GGTGA | 3 cut(s) | 611, 1088, 1408 |
| Hpy166II | GTNNAC | 5 cut(s) | 226, 321, 760, 977, 1127 |
| Hpy188I | TCNGA | 7 cut(s) | 59, 297, 312, 576, 706, 913, 1052 |
| Hpy8I | GTNNAC | 5 cut(s) | 226, 321, 760, 977, 1127 |
| HpyAV | CCTTC | 4 cut(s) | 147, 307, 434, 732 |
| HpyCH4III | ACNGT | 4 cut(s) | 505, 625, 853, 1184 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 95, 129, 779, 788, 983, 1045, 1133, 1207, 1323 |
| HpyF3I | CTNAG | 9 cut(s) | 56, 148, 309, 543, 651, 1049, 1130, 1322, 1392 |
| Hsp92II | CATG | 7 cut(s) | 166, 256, 845, 860, 1110, 1247, 1413 |
| HspAI | GCGC | 3 cut(s) | 389, 734, 997 |
| Kzo9I | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| LmnI | GCTCC | 2 cut(s) | 106, 787 |
| Lsp1109I | GCAGC | 5 cut(s) | 59, 156, 970, 1052, 1148 |
| LweI | GCATC | 6 cut(s) | 70, 299, 778, 817, 1172, 1361 |
| MaeI | CTAG | 3 cut(s) | 44, 815, 1202 |
| MalI | GATC | 6 cut(s) | 207, 522, 570, 1115, 1230, 1400 |
| MboI | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| MflI | RGATCY | 1 cut(s) | 205 |
| MhlI | GDGCHC | 3 cut(s) | 57, 979, 1129 |
| MlsI | TGGCCA | 1 cut(s) | 354 |
| MluCI | AATT | 9 cut(s) | 63, 111, 372, 777, 809, 1040, 1054, 1286, 1311 |
| MluNI | TGGCCA | 1 cut(s) | 354 |
| MlyI | GAGTC | 2 cut(s) | 249, 276 |
| MmeI | TCCRAC | 1 cut(s) | 1299 |
| Mox20I | TGGCCA | 1 cut(s) | 354 |
| Mph1103I | ATGCAT | 1 cut(s) | 1165 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1387 |
| MscI | TGGCCA | 1 cut(s) | 354 |
| MseI | TTAA | 4 cut(s) | 638, 741, 890, 1043 |
| MslI | CAYNNNNRTG | 1 cut(s) | 597 |
| Msp20I | TGGCCA | 1 cut(s) | 354 |
| MspA1I | CMGCKG | 2 cut(s) | 72, 547 |
| MspI | CCGG | 2 cut(s) | 220, 972 |
| MspR9I | CCNGG | 2 cut(s) | 221, 351 |
| MvaI | CCWGG | 1 cut(s) | 351 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 95, 129, 779, 788, 983, 1045, 1133, 1207, 1323 |
| NciI | CCSGG | 1 cut(s) | 221 |
| NdeII | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| NheI | GCTAGC | 1 cut(s) | 1201 |
| NlaIII | CATG | 7 cut(s) | 166, 256, 845, 860, 1110, 1247, 1413 |
| NlaIV | GGNNCC | 1 cut(s) | 344 |
| NmeAIII | GCCGAG | 1 cut(s) | 1186 |
| NsbI | TGCGCA | 1 cut(s) | 390 |
| NsiI | ATGCAT | 1 cut(s) | 1165 |
| NspI | RCATGY | 3 cut(s) | 845, 1247, 1413 |
| OliI | CACNNNNGTG | 1 cut(s) | 597 |
| PaeR7I | CTCGAG | 1 cut(s) | 1149 |
| PagI | TCATGA | 1 cut(s) | 856 |
| PceI | AGGCCT | 1 cut(s) | 98 |
| PciI | ACATGT | 2 cut(s) | 1243, 1409 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 399 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1387 |
| PfeI | GAWTC | 3 cut(s) | 490, 701, 1388 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 339 |
| PkrI | GCNGC | 6 cut(s) | 71, 74, 146, 985, 1067, 1138 |
| PleI | GAGTC | 2 cut(s) | 248, 275 |
| PpsI | GAGTC | 2 cut(s) | 248, 275 |
| PscI | ACATGT | 2 cut(s) | 1243, 1409 |
| PshAI | GACNNNNGTC | 1 cut(s) | 362 |
| Psp124BI | GAGCTC | 1 cut(s) | 57 |
| Psp6I | CCWGG | 1 cut(s) | 349 |
| PspGI | CCWGG | 1 cut(s) | 349 |
| PspN4I | GGNNCC | 1 cut(s) | 344 |
| PstNI | CAGNNNCTG | 1 cut(s) | 917 |
| PsuI | RGATCY | 1 cut(s) | 205 |
| PvuII | CAGCTG | 1 cut(s) | 547 |
| RsaI | GTAC | 2 cut(s) | 233, 1020 |
| RsaNI | GTAC | 2 cut(s) | 232, 1019 |
| RseI | CAYNNNNRTG | 1 cut(s) | 597 |
| SacI | GAGCTC | 1 cut(s) | 57 |
| SaqAI | TTAA | 4 cut(s) | 638, 741, 890, 1043 |
| SatI | GCNGC | 6 cut(s) | 70, 73, 145, 984, 1066, 1137 |
| Sau3AI | GATC | 6 cut(s) | 205, 520, 568, 1113, 1228, 1398 |
| SchI | GAGTC | 2 cut(s) | 249, 276 |
| ScrFI | CCNGG | 2 cut(s) | 221, 351 |
| SduI | GDGCHC | 3 cut(s) | 57, 979, 1129 |
| SfaNI | GCATC | 6 cut(s) | 70, 299, 778, 817, 1172, 1361 |
| Sfr274I | CTCGAG | 1 cut(s) | 1149 |
| SlaI | CTCGAG | 1 cut(s) | 1149 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 597 |
| SmlI | CTYRAG | 5 cut(s) | 797, 963, 1149, 1196, 1232 |
| SmoI | CTYRAG | 5 cut(s) | 797, 963, 1149, 1196, 1232 |
| Sse9I | AATT | 9 cut(s) | 63, 111, 372, 777, 809, 1040, 1054, 1286, 1311 |
| SseBI | AGGCCT | 1 cut(s) | 98 |
| SsiI | CCGC | 4 cut(s) | 70, 130, 271, 1111 |
| SspMI | CTAG | 3 cut(s) | 44, 815, 1202 |
| SstI | GAGCTC | 1 cut(s) | 57 |
| StuI | AGGCCT | 1 cut(s) | 98 |
| StyD4I | CCNGG | 2 cut(s) | 219, 349 |
| StyI | CCWWGG | 1 cut(s) | 1059 |
| TaaI | ACNGT | 4 cut(s) | 505, 625, 853, 1184 |
| TaqI | TCGA | 6 cut(s) | 366, 871, 945, 1013, 1150, 1401 |
| TasI | AATT | 9 cut(s) | 63, 111, 372, 777, 809, 1040, 1054, 1286, 1311 |
| TatI | WGTACW | 1 cut(s) | 1018 |
| TauI | GCSGC | 1 cut(s) | 72 |
| TfiI | GAWTC | 3 cut(s) | 490, 701, 1388 |
| Tru1I | TTAA | 4 cut(s) | 638, 741, 890, 1043 |
| Tru9I | TTAA | 4 cut(s) | 638, 741, 890, 1043 |
| TscAI | CASTG | 3 cut(s) | 492, 1126, 1138 |
| TseI | GCWGC | 5 cut(s) | 72, 144, 983, 1065, 1136 |
| TspDTI | ATGAA | 5 cut(s) | 179, 269, 314, 845, 1268 |
| TspGWI | ACGGA | 1 cut(s) | 1400 |
| TspRI | CASTG | 3 cut(s) | 492, 1126, 1138 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 339 |
| VneI | GTGCAC | 2 cut(s) | 975, 1125 |
| XapI | RAATTY | 3 cut(s) | 809, 1054, 1286 |
| XceI | RCATGY | 3 cut(s) | 845, 1247, 1413 |
| XhoI | CTCGAG | 1 cut(s) | 1149 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1387 |
| XspI | CTAG | 3 cut(s) | 44, 815, 1202 |
| Zsp2I | ATGCAT | 1 cut(s) | 1165 |