RLG00000012705

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0007274
Physical Location & Seq
Forward (+)
21493241 .. 21495869
2629 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012705

Sequence Viewer

Length: 1788 bp
ATGTTATGTAGGATTTTCCGGGATGTTCCAAGTGATATTACAATAGAAGTGAATGGAGGTGCTTTCTCACTGCATAAGTTCCCTCTTGTCTCTCGAAGTGGGCGCATCCGGAAGCTAGTAGCTGAACATAGAGATTCTGATATCTCAAGGGTGGAGCTTCTTAATCTACCAGGAGGAGCTGAAACATTTGAGTTGGCAGCGAAATTCTGTTATGGTATTAACTTTGAAATCACATCAGCAAATGTTGCGCAGCTGTGTTGTATATCCGATTTCCTTGAAATGACTGAAGAGTTCTCAAAAGATAATCTGGGCTCGCGTGCTGAAGAGTATCTTGAAAGCATTGTTTGCAAGAGTCTTGAAATGTGCGTTGAAGTTTTGCAACAATGTGAGGCTTTACTTCCTCTAGCTGATGAGCTCAGAGTAATTAGCCGCTGCATAGATGCAATCGCCTCAAAGGCCTGTGTGGAGCAAATTGCTTCAAGCTTCTCCCGCTTGGAGTATAGCAGCTCAGGAAGGCTACATATGAACAGGCAAGCCAAATGTGATGGGGACTGGTGGATAGAAGATCTTTCTGGCCTCCGGGTTGACTTGTACCAAAGAGTCATAACAGCCATGAAGTGTCGTGGAGTCCGCCCAGAGAGTATCGGTGCATCTCTGATGAACTATGCTCAGAAGGAGCTGACAAAGAAGTCCAGCTTATGGAACCCACCTGGCCAGGCAAAAGTTGATGTAATTTCAGTTTCAACCGCGCACGAAAAACTCGTGGTTGAAACAATTGTCAGCCTTCTTCCTGTTGAGAAACTTGCTGTTCCAATCAACTTCCTTTTCGGGCTTTTGCGAAGTGCAGTGATTCTTGATTGCACAGTTGCTTGCAGGCTTGATCTGGAGAGGAGGATTGGGTCTCAGCTAGATATTGCTTCTCTTGATGATCTTCTGATACCATCTTTCAAGCACTCTGGTGATACTTTGTTTGATGTGGATACGGTGCATAGGATTTTAATTAACTTTTCTCAGCAAGAGGATAGTGAAGAAGAAGAAATGGAAGATGGTTCTGTTTTTGAATCTGATAGTCCTCATTCGCCTTCCCAAACCGCACTTTTTAAGGTTTCAAAGTTAGTGGACAACTACCTTGCTGAGATTGCTCCTGATGCAAACCTCAAGCTCACTAAATTTCTAGTCATTGCTGATGCTTTGCCTGAACATGCACGAACTGTGCATGATGGGTTATATCGAGCCATAGACATCTATTTAAAAGCCCATCAAGGTTTATCAGATACTGACAAGAAGAAGCTCTGCAAGCTAATCGATTTCCAAAAGCTCTCTCAAGAAGCCGGTGCACACGCTGCACAGAATGAGCGCCTCCCTCTCCAGTCGATAGTACAAGTTCTTTACTTTGAGCAATTAAGGCTCAGAAATTCCTTGGGCTGCTCTAATGGTGAAGACGAACACAAGCCAATGCACCAGTCATGGCGGATCAGCAGTGGTGCACTCAGTGCAGCAATGTCTCCTCGAGACAACTATGCATCATTGAGGCGAGAAAACCGTGAGTTAAAACTTGAGCTAGCTCGGCTACGAATGAGACTAAATGATCTTGAGAGAGAACATGTCTGTATGAAGAGGGATATGGAAAAGTCCAACTCTCGTAAATTTATGAGTTCTTTCTCCAAGAAAATTGGCAAGCTAAGCTTCTTTGGACAAAGTTCTTCAAGGGCATCCACTTCTCCATCAAGACAATCATATAGAACGGATTCTAAGGTGATTGAAAGAACATGTGCAAGCATAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

596

Amino Acids

66.85

Weight (kDa)

6.04

Isoelectric Point (pI)

45.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 184 - 444 8.5e-95 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 688
Acc16I TGCGCA 1 cut(s) 249
AccB7I CCANNNNNTGG 1 cut(s) 699
AccII CGCG 2 cut(s) 316, 749
AccIII TCCGGA 1 cut(s) 108
AciI CCGC 6 cut(s) 430, 490, 631, 747, 1092, 1471
AclWI GGATC 1 cut(s) 1481
AcoI YGGCCR 1 cut(s) 712
AcsI RAATTY 4 cut(s) 203, 1169, 1414, 1646
AcuI CTGAAG 2 cut(s) 306, 342
AdeI CACNNNGTG 1 cut(s) 1493
AfaI GTAC 2 cut(s) 593, 1380
AfiI CCNNNNNNNGG 1 cut(s) 699
AflIII ACRYGT 2 cut(s) 1603, 1769
AjnI CCWGG 3 cut(s) 169, 709, 714
AleI CACNNNNGTG 1 cut(s) 957
Alw21I GWGCWC 3 cut(s) 417, 1339, 1489
Alw26I GTCTC 5 cut(s) 94, 906, 1506, 1509, 1573
Alw44I GTGCAC 2 cut(s) 1335, 1485
AlwI GGATC 1 cut(s) 1481
AlwNI CAGNNNCTG 1 cut(s) 1277
Ama87I CYCGRG 1 cut(s) 1509
Aor13HI TCCGGA 1 cut(s) 108
AoxI GGCC 3 cut(s) 456, 574, 712
ApaLI GTGCAC 2 cut(s) 1335, 1485
ApeKI GCWGC 7 cut(s) 197, 250, 432, 504, 1343, 1425, 1496
ApoI RAATTY 4 cut(s) 203, 1169, 1414, 1646
Asp700I GAANNNNTTC 1 cut(s) 1747
AspLEI GCGC 4 cut(s) 105, 250, 751, 1359
AsuC2I CCSGG 2 cut(s) 20, 581
AsuHPI GGTGA 3 cut(s) 971, 1448, 1768
AsuNHI GCTAGC 1 cut(s) 1561
AvaI CYCGRG 1 cut(s) 1509
BaeGI GKGCMC 2 cut(s) 1339, 1489
BalI TGGCCA 1 cut(s) 714
BanII GRGCYC 2 cut(s) 314, 417
BauI CACGAG 1 cut(s) 761
BbsI GAAGAC 1 cut(s) 1446
Bbv12I GWGCWC 3 cut(s) 417, 1339, 1489
BbvI GCAGC 7 cut(s) 209, 262, 419, 516, 1330, 1412, 1508
BccI CCATC 6 cut(s) 539, 949, 1040, 1214, 1266, 1732
BcgI CGANNNNNNTGC 2 cut(s) 1285, 1319
BciT130I CCWGG 3 cut(s) 171, 711, 716
BciVI GTATCC 1 cut(s) 973
BcnI CCSGG 2 cut(s) 20, 581
BcoDI GTCTC 5 cut(s) 94, 906, 1506, 1509, 1573
BfaI CTAG 5 cut(s) 116, 404, 908, 1175, 1562
BfoI RGCGCY 1 cut(s) 1360
BfuI GTATCC 1 cut(s) 973
BglI GCCNNNNNGGC 1 cut(s) 455
BglII AGATCT 1 cut(s) 565
BisI GCNGC 8 cut(s) 198, 251, 430, 433, 505, 1344, 1426, 1497
BlpI GCTNAGC 1 cut(s) 1682
BlsI GCNGC 8 cut(s) 199, 252, 431, 434, 506, 1345, 1427, 1498
Bme1390I CCNGG 5 cut(s) 20, 171, 581, 711, 716
BmeT110I CYCGRG 1 cut(s) 1509
BmiI GGNNCC 1 cut(s) 704
BmrFI CCNGG 5 cut(s) 20, 171, 581, 711, 716
BmsI GCATC 7 cut(s) 114, 430, 659, 1138, 1177, 1532, 1721
BmtI GCTAGC 1 cut(s) 1565
BpiI GAAGAC 1 cut(s) 1446
BpmI CTGGAG 2 cut(s) 905, 1352
Bpu10I CCTNAGC 1 cut(s) 508
Bpu1102I GCTNAGC 1 cut(s) 1682
BpuEI CTTGAG 5 cut(s) 130, 1142, 1308, 1577, 1613
BpuMI CCSGG 2 cut(s) 20, 581
Bsa29I ATCGAT 1 cut(s) 1305
BsaI GGTCTC 1 cut(s) 906
BsaJI CCNNGG 1 cut(s) 1419
BsaWI WCCGGW 1 cut(s) 108
Bsc4I CCNNNNNNNGG 1 cut(s) 699
Bse118I RCCGGY 1 cut(s) 1331
Bse1I ACTGG 3 cut(s) 557, 1369, 1462
Bse3DI GCAATG 2 cut(s) 1179, 1506
BseAI TCCGGA 1 cut(s) 108
BseBI CCWGG 3 cut(s) 171, 711, 716
BseCI ATCGAT 1 cut(s) 1305
BseDI CCNNGG 1 cut(s) 1419
BseGI GGATG 3 cut(s) 28, 105, 1712
BseLI CCNNNNNNNGG 1 cut(s) 699
BseMI GCAATG 2 cut(s) 1179, 1506
BseMII CTCAG 8 cut(s) 430, 522, 683, 917, 1025, 1125, 1423, 1504
BseNI ACTGG 3 cut(s) 557, 1369, 1462
BseRI GAGGAG 3 cut(s) 189, 904, 1497
BseSI GKGCMC 2 cut(s) 1339, 1489
BseXI GCAGC 7 cut(s) 209, 262, 419, 516, 1330, 1412, 1508
BsgI GTGCAG 3 cut(s) 864, 1329, 1515
Bsh1236I CGCG 2 cut(s) 316, 749
BshFI GGCC 3 cut(s) 458, 576, 714
BshVI ATCGAT 1 cut(s) 1305
BsiHKAI GWGCWC 3 cut(s) 417, 1339, 1489
BsiHKCI CYCGRG 1 cut(s) 1509
BsiSI CCGG 4 cut(s) 19, 109, 580, 1332
BslFI GGGAC 1 cut(s) 563
BslI CCNNNNNNNGG 1 cut(s) 699
BsmAI GTCTC 5 cut(s) 94, 906, 1506, 1509, 1573
BsmFI GGGAC 1 cut(s) 563
BsnI GGCC 3 cut(s) 458, 576, 714
Bso31I GGTCTC 1 cut(s) 906
BsoBI CYCGRG 1 cut(s) 1509
Bsp1286I GDGCHC 4 cut(s) 314, 417, 1339, 1489
Bsp13I TCCGGA 1 cut(s) 108
Bsp143I GATC 5 cut(s) 565, 880, 928, 1473, 1588
Bsp1720I GCTNAGC 1 cut(s) 1682
BspACI CCGC 6 cut(s) 430, 490, 631, 747, 1092, 1471
BspANI GGCC 3 cut(s) 458, 576, 714
BspCNI CTCAG 8 cut(s) 429, 521, 682, 916, 1024, 1126, 1422, 1503
BspDI ATCGAT 1 cut(s) 1305
BspEI TCCGGA 1 cut(s) 108
BspFNI CGCG 2 cut(s) 316, 749
BspLI GGNNCC 1 cut(s) 704
BspOI GCTAGC 1 cut(s) 1565
BspPI GGATC 1 cut(s) 1481
BspTNI GGTCTC 1 cut(s) 906
BsrDI GCAATG 2 cut(s) 1179, 1506
BsrFI RCCGGY 1 cut(s) 1331
BsrI ACTGG 3 cut(s) 557, 1369, 1462
BssAI RCCGGY 1 cut(s) 1331
BssECI CCNNGG 1 cut(s) 1419
BssMI GATC 5 cut(s) 565, 880, 928, 1473, 1588
BssSI CACGAG 1 cut(s) 761
BssT1I CCWWGG 1 cut(s) 1419
Bst2BI CACGAG 1 cut(s) 761
Bst2UI CCWGG 3 cut(s) 171, 711, 716
Bst4CI ACNGT 4 cut(s) 865, 985, 1213, 1544
Bst6I CTCTTC 3 cut(s) 282, 318, 1610
BstAPI GCANNNNNTGC 4 cut(s) 245, 345, 1343, 1493
BstC8I GCNNGC 9 cut(s) 314, 318, 534, 871, 875, 1298, 1563, 1679, 1777
BstF5I GGATG 3 cut(s) 28, 105, 1712
BstFNI CGCG 2 cut(s) 316, 749
BstH2I RGCGCY 1 cut(s) 1360
BstHHI GCGC 4 cut(s) 105, 250, 751, 1359
BstKTI GATC 5 cut(s) 568, 883, 931, 1476, 1591
BstMAI GTCTC 5 cut(s) 94, 906, 1506, 1509, 1573
BstMBI GATC 5 cut(s) 565, 880, 928, 1473, 1588
BstNI CCWGG 3 cut(s) 171, 711, 716
BstNSI RCATGY 3 cut(s) 1205, 1607, 1773
BstSCI CCNGG 5 cut(s) 18, 169, 579, 709, 714
BstSLI GKGCMC 2 cut(s) 1339, 1489
BstUI CGCG 2 cut(s) 316, 749
BstV1I GCAGC 7 cut(s) 209, 262, 419, 516, 1330, 1412, 1508
BstV2I GAAGAC 1 cut(s) 1446
BstX2I RGATCY 1 cut(s) 565
BstYI RGATCY 1 cut(s) 565
Bsu15I ATCGAT 1 cut(s) 1305
BsuI GTATCC 1 cut(s) 973
BsuRI GGCC 3 cut(s) 458, 576, 714
BsuTUI ATCGAT 1 cut(s) 1305
BtsCI GGATG 3 cut(s) 28, 105, 1712
BtsI GCAGTG 3 cut(s) 68, 852, 1486
BtsIMutI CAGTG 4 cut(s) 68, 852, 1486, 1498
Cac8I GCNNGC 9 cut(s) 314, 318, 534, 871, 875, 1298, 1563, 1679, 1777
CaiI CAGNNNCTG 1 cut(s) 1277
CfoI GCGC 4 cut(s) 105, 250, 751, 1359
Cfr10I RCCGGY 1 cut(s) 1331
ClaI ATCGAT 1 cut(s) 1305
Csp6I GTAC 2 cut(s) 592, 1379
CspCI CAANNNNNGTGG 2 cut(s) 1098, 1133
CviAII CATG 6 cut(s) 613, 1202, 1217, 1467, 1604, 1770
CviQI GTAC 2 cut(s) 592, 1379
DpnI GATC 5 cut(s) 567, 882, 930, 1475, 1590
DpnII GATC 5 cut(s) 565, 880, 928, 1473, 1588
DraI TTTAAA 1 cut(s) 1251
DraIII CACNNNGTG 1 cut(s) 1493
DrdI GACNNNNNNGTC 1 cut(s) 688
DseDI GACNNNNNNGTC 1 cut(s) 688
EaeI YGGCCR 1 cut(s) 712
Eam1104I CTCTTC 3 cut(s) 282, 318, 1610
EarI CTCTTC 3 cut(s) 282, 318, 1610
EciI GGCGGA 2 cut(s) 620, 1486
Ecl136II GAGCTC 1 cut(s) 415
Eco130I CCWWGG 1 cut(s) 1419
Eco147I AGGCCT 1 cut(s) 458
Eco24I GRGCYC 2 cut(s) 314, 417
Eco31I GGTCTC 1 cut(s) 906
Eco32I GATATC 1 cut(s) 142
Eco53kI GAGCTC 1 cut(s) 415
Eco57I CTGAAG 2 cut(s) 306, 342
Eco88I CYCGRG 1 cut(s) 1509
EcoICRI GAGCTC 1 cut(s) 415
EcoRII CCWGG 3 cut(s) 169, 709, 714
EcoRV GATATC 1 cut(s) 142
EcoT14I CCWWGG 1 cut(s) 1419
EcoT22I ATGCAT 1 cut(s) 1525
EcoT38I GRGCYC 2 cut(s) 314, 417
ErhI CCWWGG 1 cut(s) 1419
FaeI CATG 6 cut(s) 616, 1205, 1220, 1470, 1607, 1773
FalI AAGNNNNNCTT 6 cut(s) 315, 347, 680, 712, 1670, 1702
FaqI GGGAC 1 cut(s) 563
FatI CATG 6 cut(s) 612, 1201, 1216, 1466, 1603, 1769
FauI CCCGC 1 cut(s) 497
FauNDI CATATG 1 cut(s) 522
Fnu4HI GCNGC 8 cut(s) 198, 251, 430, 433, 505, 1344, 1426, 1497
FokI GGATG 3 cut(s) 35, 92, 1699
FriOI GRGCYC 2 cut(s) 314, 417
Fsp4HI GCNGC 8 cut(s) 198, 251, 430, 433, 505, 1344, 1426, 1497
FspBI CTAG 5 cut(s) 116, 404, 908, 1175, 1562
FspI TGCGCA 1 cut(s) 249
GlaI GCGC 4 cut(s) 104, 249, 750, 1358
GluI GCNGC 8 cut(s) 198, 251, 430, 433, 505, 1344, 1426, 1497
GsuI CTGGAG 2 cut(s) 905, 1352
HaeII RGCGCY 1 cut(s) 1360
HaeIII GGCC 3 cut(s) 458, 576, 714
HapII CCGG 4 cut(s) 19, 109, 580, 1332
HhaI GCGC 4 cut(s) 105, 250, 751, 1359
Hin1II CATG 6 cut(s) 616, 1205, 1220, 1470, 1607, 1773
Hin6I GCGC 4 cut(s) 103, 248, 749, 1357
HinP1I GCGC 4 cut(s) 103, 248, 749, 1357
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HindIII AAGCTT 2 cut(s) 481, 1684
HinfI GANTC 7 cut(s) 134, 352, 600, 627, 850, 1061, 1748
HpaII CCGG 4 cut(s) 19, 109, 580, 1332
HphI GGTGA 3 cut(s) 971, 1448, 1768
Hpy166II GTNNAC 4 cut(s) 586, 1120, 1337, 1487
Hpy188I TCNGA 9 cut(s) 139, 268, 419, 657, 672, 936, 1066, 1273, 1412
Hpy8I GTNNAC 4 cut(s) 586, 1120, 1337, 1487
HpyAV CCTTC 4 cut(s) 507, 667, 794, 1092
HpyCH4III ACNGT 4 cut(s) 865, 985, 1213, 1544
Hsp92II CATG 6 cut(s) 616, 1205, 1220, 1470, 1607, 1773
HspAI GCGC 4 cut(s) 103, 248, 749, 1357
Kpn2I TCCGGA 1 cut(s) 108
Kzo9I GATC 5 cut(s) 565, 880, 928, 1473, 1588
LmnI GCTCC 5 cut(s) 154, 176, 466, 676, 1147
Lsp1109I GCAGC 7 cut(s) 209, 262, 419, 516, 1330, 1412, 1508
LweI GCATC 7 cut(s) 114, 430, 659, 1138, 1177, 1532, 1721
MaeI CTAG 5 cut(s) 116, 404, 908, 1175, 1562
MalI GATC 5 cut(s) 567, 882, 930, 1475, 1590
MboI GATC 5 cut(s) 565, 880, 928, 1473, 1588
MfeI CAATTG 1 cut(s) 774
MflI RGATCY 1 cut(s) 565
MhlI GDGCHC 4 cut(s) 314, 417, 1339, 1489
MlsI TGGCCA 1 cut(s) 714
MluNI TGGCCA 1 cut(s) 714
MlyI GAGTC 3 cut(s) 361, 609, 636
MmeI TCCRAC 1 cut(s) 1659
Mox20I TGGCCA 1 cut(s) 714
Mph1103I ATGCAT 1 cut(s) 1525
MroI TCCGGA 1 cut(s) 108
MroXI GAANNNNTTC 1 cut(s) 1747
MscI TGGCCA 1 cut(s) 714
MseI TTAA 8 cut(s) 162, 219, 998, 1002, 1101, 1250, 1403, 1550
MslI CAYNNNNRTG 1 cut(s) 957
Msp20I TGGCCA 1 cut(s) 714
MspA1I CMGCKG 2 cut(s) 253, 432
MspI CCGG 4 cut(s) 19, 109, 580, 1332
MspR9I CCNGG 5 cut(s) 20, 171, 581, 711, 716
MunI CAATTG 1 cut(s) 774
MvaI CCWGG 3 cut(s) 171, 711, 716
MvnI CGCG 2 cut(s) 316, 749
NciI CCSGG 2 cut(s) 20, 581
NdeI CATATG 1 cut(s) 522
NdeII GATC 5 cut(s) 565, 880, 928, 1473, 1588
NheI GCTAGC 1 cut(s) 1561
NlaIII CATG 6 cut(s) 616, 1205, 1220, 1470, 1607, 1773
NlaIV GGNNCC 1 cut(s) 704
NmeAIII GCCGAG 1 cut(s) 1546
NsbI TGCGCA 1 cut(s) 249
NsiI ATGCAT 1 cut(s) 1525
NspI RCATGY 3 cut(s) 1205, 1607, 1773
OliI CACNNNNGTG 1 cut(s) 957
PacI TTAATTAA 1 cut(s) 1002
PaeR7I CTCGAG 1 cut(s) 1509
PceI AGGCCT 1 cut(s) 458
PciI ACATGT 2 cut(s) 1603, 1769
PcsI WCGNNNNNNNCGW 1 cut(s) 759
PdmI GAANNNNTTC 1 cut(s) 1747
PfeI GAWTC 4 cut(s) 134, 850, 1061, 1748
PflMI CCANNNNNTGG 1 cut(s) 699
PfoI TCCNGGA 1 cut(s) 18
PkrI GCNGC 8 cut(s) 199, 252, 431, 434, 506, 1345, 1427, 1498
PleI GAGTC 3 cut(s) 360, 608, 635
PpsI GAGTC 3 cut(s) 360, 608, 635
PscI ACATGT 2 cut(s) 1603, 1769
Psp124BI GAGCTC 1 cut(s) 417
Psp6I CCWGG 3 cut(s) 169, 709, 714
PspGI CCWGG 3 cut(s) 169, 709, 714
PspN4I GGNNCC 1 cut(s) 704
PstNI CAGNNNCTG 1 cut(s) 1277
PsuI RGATCY 1 cut(s) 565
PvuII CAGCTG 1 cut(s) 253
RsaI GTAC 2 cut(s) 593, 1380
RsaNI GTAC 2 cut(s) 592, 1379
RseI CAYNNNNRTG 1 cut(s) 957
SacI GAGCTC 1 cut(s) 417
SaqAI TTAA 8 cut(s) 162, 219, 998, 1002, 1101, 1250, 1403, 1550
SatI GCNGC 8 cut(s) 198, 251, 430, 433, 505, 1344, 1426, 1497
Sau3AI GATC 5 cut(s) 565, 880, 928, 1473, 1588
SchI GAGTC 3 cut(s) 361, 609, 636
ScrFI CCNGG 5 cut(s) 20, 171, 581, 711, 716
SduI GDGCHC 4 cut(s) 314, 417, 1339, 1489
SfaNI GCATC 7 cut(s) 114, 430, 659, 1138, 1177, 1532, 1721
Sfr274I CTCGAG 1 cut(s) 1509
SlaI CTCGAG 1 cut(s) 1509
SmiMI CAYNNNNRTG 1 cut(s) 957
SmlI CTYRAG 6 cut(s) 145, 1157, 1323, 1509, 1556, 1592
SmoI CTYRAG 6 cut(s) 145, 1157, 1323, 1509, 1556, 1592
SseBI AGGCCT 1 cut(s) 458
SsiI CCGC 6 cut(s) 430, 490, 631, 747, 1092, 1471
SspMI CTAG 5 cut(s) 116, 404, 908, 1175, 1562
SstI GAGCTC 1 cut(s) 417
StuI AGGCCT 1 cut(s) 458
StyD4I CCNGG 5 cut(s) 18, 169, 579, 709, 714
StyI CCWWGG 1 cut(s) 1419
TaaI ACNGT 4 cut(s) 865, 985, 1213, 1544
TaqI TCGA 5 cut(s) 94, 1231, 1305, 1373, 1510
TatI WGTACW 1 cut(s) 1378
TauI GCSGC 1 cut(s) 432
TfiI GAWTC 4 cut(s) 134, 850, 1061, 1748
Tru1I TTAA 8 cut(s) 162, 219, 998, 1002, 1101, 1250, 1403, 1550
Tru9I TTAA 8 cut(s) 162, 219, 998, 1002, 1101, 1250, 1403, 1550
TscAI CASTG 4 cut(s) 75, 852, 1486, 1498
TseI GCWGC 7 cut(s) 197, 250, 432, 504, 1343, 1425, 1496
TspDTI ATGAA 4 cut(s) 539, 629, 674, 1628
TspGWI ACGGA 1 cut(s) 1760
TspRI CASTG 4 cut(s) 75, 852, 1486, 1498
Van91I CCANNNNNTGG 1 cut(s) 699
VneI GTGCAC 2 cut(s) 1335, 1485
XapI RAATTY 4 cut(s) 203, 1169, 1414, 1646
XceI RCATGY 3 cut(s) 1205, 1607, 1773
XhoI CTCGAG 1 cut(s) 1509
XmnI GAANNNNTTC 1 cut(s) 1747
XspI CTAG 5 cut(s) 116, 404, 908, 1175, 1562
Zsp2I ATGCAT 1 cut(s) 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.