Rw6G024090

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0007274
Physical Location & Seq
Reverse (-)
46876066 .. 46879058
2993 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G024090.1

Sequence Viewer

Length: 1881 bp
ATGGACCGCGGCGGGGACAAGCAGCACCACCAGCACCAGCAACAGCAGCAGCAGCAGCTCTCTTTGCCTAAGAGTGCAAGGCAGCAGCACAGATATAACGAATGGATTTTCCGGGATGTTCCAAGTGATATTACAATTGAAGTGAATGGAGGTGCTTTCTCACTGCATAAGTTCCCTCTTGTCTCTCGAAGTGGGCGCATCCGGAAGCTAGTAGCTGAACATAGAGATTCTGATATCTCAAGGGTGGAGCTTCTTAATCTACCAGGAGGCGCTGAAACATTTGAGTTGGCAGCGAAATTCTGTTATGGTATTAACTTTGAAATCACATCAGCAAATGTTGCGCAGCTGTGTTGTATATCCGATTTCCTTGAAATGACTGAAGAGTTCTCAAAAGATAATCTTGGCTCGCGTGCTGAAGAGTATCTCGAAAGCATTGTTTGCAAGAGTCTTGAAATGTGCGTTGAAGTTTTGCAACAATGTGAGACTTTACTTCCTCTAGCTGATGAGCTCAGAGTAATTAGCCGCTGCATAGATGCAATCGCCTCAAAGGCCTGCGTGGAGCAAATTGCTTCAAGCTTCTCCCGCTTGGAGTATAGTAGCTCAGGAAGGCTACACATGAACAGGCAAGCCAAATGTGATGGGGACTGGTGGATAGAAGATCTTTCTGGCCTCCGGGTTGACTTGTACCAAAGAGTCATAACAGCCATGAAGTGTCGTGGAGTCCGCCCAGAGAGTATCGGTGCATCTCTGATGAACTATGCTCAGAAGGAGTTGACAAAGAAGTCCAGCTTATGGAACCCACCTGGCCAGACAAAAGTCGATGTAATTTCAGTTTCAACTGCGCACGAAAAACTCGTGGTTGAAACGATTGTCAGCCTTCTTCCTGTTGAGAAACTTGCTGTTCCAATCAACTTCCTTTTCGGGCTTTTGCGAAGTGCAGTGATTCTTGATTGCACCGTTGCTTGCAGACTTGATCTGGAGAGGAGGATTGGGTCTCAGCTGGATATTGCTTCTCTTGATGATCTTCTGATGCCATCTTTCAAGCACTCTGGTGATACTTTGTTTGATGTGGATACGGTGCATAGGATTTTAATCAACTTTTCTCAGCAAGAGGATAGTGAAGAAGAAGAAATGGAAGATGGTTCTGTTTTTGAATCTGATAGTCCTCATTCGCCTTCCCAAACTGCGCTTTTTAAGGTTTCAAAGTTAGTGGACAACTACCTTGCTGAGATTGCTCCTGATGCAAACCTCAAGCTCACTAAATTTCTAGTCATTGCTGATGCTTTGCCTGAACATGCACGAACTGTTCATGATGGGTTATATCGAGCCATAGACATCTATTTAAAAGCCCATCAAGGTTTATCAGATACTGACAAGAAGAAGCTCTGCAAACTAATCGATTTCCAAAAGCTTTCTCAAGAAGCCGGTGCACACGCTGCACAGAATGAGCGCCTCCCTCTCCAGTCGATAGTACAAGTTCTTTACTTTGAGCAATTAAGGCTCAGAAATTCCTTGGGCTGCTCTAATGGTGAAGACGAACACAAGCCAATGCACCAGTCATGGCGGATCAGCAGTGGTGCACTCAGTGCAGCAATGTCTCCTCGAGACAACTATGCATCATTGAGGCGAGAAAACCGTGAGCTAAAACTTGAGCTAGCTCGGCTACGAATGAGACTAAATGATCTTGAGAGAGAACATGTCTGTATGAAGAGAGATATGGAAAAGTCCAACTCTCGTAAATTTATGAGTTCTTTCTCCAAGAAAATTGGCAAGCTAAGCTTCTTTGGACATAGTTCTTCAAGGGCATCCACTTCTCCATCAAGACAATCATATAGAACGGATTCTAAGGTGATCGAAAGAACATGTGCAAGCATAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

626

Amino Acids

70.75

Weight (kDa)

6.29

Isoelectric Point (pI)

46.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 215 - 475 2.9e-94 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 781
Acc16I TGCGCA 2 cut(s) 342, 843
AccB7I CCANNNNNTGG 1 cut(s) 792
AccII CGCG 2 cut(s) 9, 409
AccIII TCCGGA 1 cut(s) 201
AciI CCGC 7 cut(s) 7, 9, 12, 523, 583, 724, 1564
AclWI GGATC 1 cut(s) 1574
AcoI YGGCCR 1 cut(s) 805
AcsI RAATTY 4 cut(s) 296, 1262, 1507, 1739
AcuI CTGAAG 2 cut(s) 399, 435
AdeI CACNNNGTG 1 cut(s) 1586
AfaI GTAC 2 cut(s) 686, 1473
AfiI CCNNNNNNNGG 2 cut(s) 13, 792
AflIII ACRYGT 2 cut(s) 1696, 1862
AjnI CCWGG 2 cut(s) 262, 802
AleI CACNNNNGTG 1 cut(s) 1050
Alw21I GWGCWC 3 cut(s) 510, 1432, 1582
Alw26I GTCTC 6 cut(s) 187, 476, 999, 1599, 1602, 1666
Alw44I GTGCAC 2 cut(s) 1428, 1578
AlwI GGATC 1 cut(s) 1574
AlwNI CAGNNNCTG 1 cut(s) 1370
Ama87I CYCGRG 1 cut(s) 1602
Aor13HI TCCGGA 1 cut(s) 201
AoxI GGCC 3 cut(s) 549, 667, 805
ApaLI GTGCAC 2 cut(s) 1428, 1578
ApoI RAATTY 4 cut(s) 296, 1262, 1507, 1739
Asp700I GAANNNNTTC 1 cut(s) 1840
AspLEI GCGC 6 cut(s) 198, 272, 343, 844, 1189, 1452
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 2 cut(s) 113, 674
AsuHPI GGTGA 3 cut(s) 1064, 1541, 1861
AsuNHI GCTAGC 1 cut(s) 1654
AvaI CYCGRG 1 cut(s) 1602
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 2 cut(s) 1432, 1582
BalI TGGCCA 1 cut(s) 807
BanII GRGCYC 1 cut(s) 510
BauI CACGAG 1 cut(s) 854
BbsI GAAGAC 1 cut(s) 1539
Bbv12I GWGCWC 3 cut(s) 510, 1432, 1582
BccI CCATC 6 cut(s) 632, 1042, 1133, 1307, 1359, 1825
BcgI CGANNNNNNTGC 2 cut(s) 1378, 1412
BciT130I CCWGG 2 cut(s) 264, 804
BciVI GTATCC 1 cut(s) 1066
BcnI CCSGG 2 cut(s) 113, 674
BcoDI GTCTC 6 cut(s) 187, 476, 999, 1599, 1602, 1666
BfaI CTAG 4 cut(s) 209, 497, 1268, 1655
BfoI RGCGCY 2 cut(s) 273, 1453
BfuI GTATCC 1 cut(s) 1066
BglI GCCNNNNNGGC 1 cut(s) 548
BglII AGATCT 1 cut(s) 658
BlpI GCTNAGC 1 cut(s) 1775
Bme1390I CCNGG 4 cut(s) 113, 264, 674, 804
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 1602
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 797
BmrFI CCNGG 4 cut(s) 113, 264, 674, 804
BmsI GCATC 8 cut(s) 207, 523, 752, 1020, 1231, 1270, 1625, 1814
BmtI GCTAGC 1 cut(s) 1658
BoxI GACNNNNGTC 1 cut(s) 815
BpiI GAAGAC 1 cut(s) 1539
BpmI CTGGAG 2 cut(s) 998, 1445
Bpu10I CCTNAGC 1 cut(s) 601
Bpu1102I GCTNAGC 1 cut(s) 1775
BpuEI CTTGAG 5 cut(s) 223, 1235, 1401, 1670, 1706
BpuMI CCSGG 2 cut(s) 113, 674
Bsa29I ATCGAT 1 cut(s) 1398
BsaBI GATNNNNATC 1 cut(s) 1091
BsaI GGTCTC 1 cut(s) 999
BsaJI CCNNGG 2 cut(s) 7, 1512
BsaWI WCCGGW 1 cut(s) 201
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 792
Bse118I RCCGGY 1 cut(s) 1424
Bse1I ACTGG 3 cut(s) 650, 1462, 1555
Bse3DI GCAATG 2 cut(s) 1272, 1599
Bse8I GATNNNNATC 1 cut(s) 1091
BseAI TCCGGA 1 cut(s) 201
BseBI CCWGG 2 cut(s) 264, 804
BseCI ATCGAT 1 cut(s) 1398
BseDI CCNNGG 2 cut(s) 7, 1512
BseGI GGATG 3 cut(s) 121, 198, 1805
BseJI GATNNNNATC 1 cut(s) 1091
BseLI CCNNNNNNNGG 2 cut(s) 13, 792
BseMI GCAATG 2 cut(s) 1272, 1599
BseMII CTCAG 8 cut(s) 523, 615, 776, 1010, 1118, 1218, 1516, 1597
BseNI ACTGG 3 cut(s) 650, 1462, 1555
BseRI GAGGAG 2 cut(s) 997, 1590
BseSI GKGCMC 2 cut(s) 1432, 1582
BsgI GTGCAG 3 cut(s) 957, 1422, 1608
Bsh1236I CGCG 2 cut(s) 9, 409
BshFI GGCC 3 cut(s) 551, 669, 807
BshVI ATCGAT 1 cut(s) 1398
BsiHKAI GWGCWC 3 cut(s) 510, 1432, 1582
BsiHKCI CYCGRG 1 cut(s) 1602
BsiSI CCGG 4 cut(s) 112, 202, 673, 1425
BslFI GGGAC 2 cut(s) 29, 656
BslI CCNNNNNNNGG 2 cut(s) 13, 792
BsmAI GTCTC 6 cut(s) 187, 476, 999, 1599, 1602, 1666
BsmFI GGGAC 2 cut(s) 29, 656
BsnI GGCC 3 cut(s) 551, 669, 807
Bso31I GGTCTC 1 cut(s) 999
BsoBI CYCGRG 1 cut(s) 1602
Bsp1286I GDGCHC 3 cut(s) 510, 1432, 1582
Bsp13I TCCGGA 1 cut(s) 201
Bsp143I GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
Bsp1720I GCTNAGC 1 cut(s) 1775
BspACI CCGC 7 cut(s) 7, 9, 12, 523, 583, 724, 1564
BspANI GGCC 3 cut(s) 551, 669, 807
BspCNI CTCAG 8 cut(s) 522, 614, 775, 1009, 1117, 1219, 1515, 1596
BspDI ATCGAT 1 cut(s) 1398
BspEI TCCGGA 1 cut(s) 201
BspFNI CGCG 2 cut(s) 9, 409
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 1 cut(s) 797
BspOI GCTAGC 1 cut(s) 1658
BspPI GGATC 1 cut(s) 1574
BspTNI GGTCTC 1 cut(s) 999
BsrDI GCAATG 2 cut(s) 1272, 1599
BsrFI RCCGGY 1 cut(s) 1424
BsrI ACTGG 3 cut(s) 650, 1462, 1555
BssAI RCCGGY 1 cut(s) 1424
BssECI CCNNGG 2 cut(s) 7, 1512
BssMI GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
BssSI CACGAG 1 cut(s) 854
BssT1I CCWWGG 1 cut(s) 1512
Bst2BI CACGAG 1 cut(s) 854
Bst2UI CCWGG 2 cut(s) 264, 804
Bst4CI ACNGT 4 cut(s) 958, 1078, 1306, 1637
Bst6I CTCTTC 3 cut(s) 375, 411, 1703
BstAPI GCANNNNNTGC 4 cut(s) 338, 438, 1436, 1586
BstC8I GCNNGC 8 cut(s) 407, 411, 553, 627, 964, 1656, 1772, 1870
BstDSI CCRYGG 1 cut(s) 7
BstF5I GGATG 3 cut(s) 121, 198, 1805
BstFNI CGCG 2 cut(s) 9, 409
BstH2I RGCGCY 2 cut(s) 273, 1453
BstHHI GCGC 6 cut(s) 198, 272, 343, 844, 1189, 1452
BstKTI GATC 6 cut(s) 661, 976, 1024, 1569, 1684, 1854
BstMAI GTCTC 6 cut(s) 187, 476, 999, 1599, 1602, 1666
BstMBI GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
BstNI CCWGG 2 cut(s) 264, 804
BstNSI RCATGY 3 cut(s) 1298, 1700, 1866
BstPAI GACNNNNGTC 1 cut(s) 815
BstSCI CCNGG 4 cut(s) 111, 262, 672, 802
BstSLI GKGCMC 2 cut(s) 1432, 1582
BstUI CGCG 2 cut(s) 9, 409
BstV2I GAAGAC 1 cut(s) 1539
BstX2I RGATCY 1 cut(s) 658
BstYI RGATCY 1 cut(s) 658
Bsu15I ATCGAT 1 cut(s) 1398
BsuI GTATCC 1 cut(s) 1066
BsuRI GGCC 3 cut(s) 551, 669, 807
BsuTUI ATCGAT 1 cut(s) 1398
BtgI CCRYGG 1 cut(s) 7
BtsCI GGATG 3 cut(s) 121, 198, 1805
BtsI GCAGTG 3 cut(s) 161, 945, 1579
BtsIMutI CAGTG 4 cut(s) 161, 945, 1579, 1591
Cac8I GCNNGC 8 cut(s) 407, 411, 553, 627, 964, 1656, 1772, 1870
CaiI CAGNNNCTG 1 cut(s) 1370
CciI TCATGA 1 cut(s) 1309
CfoI GCGC 6 cut(s) 198, 272, 343, 844, 1189, 1452
Cfr10I RCCGGY 1 cut(s) 1424
Cfr13I GGNCC 1 cut(s) 4
Cfr42I CCGCGG 1 cut(s) 10
ClaI ATCGAT 1 cut(s) 1398
Csp6I GTAC 2 cut(s) 685, 1472
CspCI CAANNNNNGTGG 2 cut(s) 1191, 1226
CviAII CATG 7 cut(s) 616, 706, 1295, 1310, 1560, 1697, 1863
CviQI GTAC 2 cut(s) 685, 1472
DpnI GATC 6 cut(s) 660, 975, 1023, 1568, 1683, 1853
DpnII GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
DraI TTTAAA 1 cut(s) 1344
DraIII CACNNNGTG 1 cut(s) 1586
DrdI GACNNNNNNGTC 1 cut(s) 781
DseDI GACNNNNNNGTC 1 cut(s) 781
EaeI YGGCCR 1 cut(s) 805
Eam1104I CTCTTC 3 cut(s) 375, 411, 1703
EarI CTCTTC 3 cut(s) 375, 411, 1703
EciI GGCGGA 2 cut(s) 713, 1579
Ecl136II GAGCTC 1 cut(s) 508
Eco130I CCWWGG 1 cut(s) 1512
Eco147I AGGCCT 1 cut(s) 551
Eco24I GRGCYC 1 cut(s) 510
Eco31I GGTCTC 1 cut(s) 999
Eco32I GATATC 1 cut(s) 235
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 508
Eco57I CTGAAG 2 cut(s) 399, 435
Eco88I CYCGRG 1 cut(s) 1602
EcoICRI GAGCTC 1 cut(s) 508
EcoRII CCWGG 2 cut(s) 262, 802
EcoRV GATATC 1 cut(s) 235
EcoT14I CCWWGG 1 cut(s) 1512
EcoT22I ATGCAT 1 cut(s) 1618
EcoT38I GRGCYC 1 cut(s) 510
ErhI CCWWGG 1 cut(s) 1512
FaeI CATG 7 cut(s) 619, 709, 1298, 1313, 1563, 1700, 1866
FalI AAGNNNNNCTT 6 cut(s) 384, 416, 773, 805, 1763, 1795
FaqI GGGAC 2 cut(s) 29, 656
FatI CATG 7 cut(s) 615, 705, 1294, 1309, 1559, 1696, 1862
FauI CCCGC 2 cut(s) 5, 590
FokI GGATG 3 cut(s) 128, 185, 1792
FriOI GRGCYC 1 cut(s) 510
FspBI CTAG 4 cut(s) 209, 497, 1268, 1655
FspI TGCGCA 2 cut(s) 342, 843
GlaI GCGC 6 cut(s) 197, 271, 342, 843, 1188, 1451
GsuI CTGGAG 2 cut(s) 998, 1445
HaeII RGCGCY 2 cut(s) 273, 1453
HaeIII GGCC 3 cut(s) 551, 669, 807
HapII CCGG 4 cut(s) 112, 202, 673, 1425
HhaI GCGC 6 cut(s) 198, 272, 343, 844, 1189, 1452
Hin1II CATG 7 cut(s) 619, 709, 1298, 1313, 1563, 1700, 1866
Hin6I GCGC 6 cut(s) 196, 270, 341, 842, 1187, 1450
HinP1I GCGC 6 cut(s) 196, 270, 341, 842, 1187, 1450
HincII GTYRAC 2 cut(s) 679, 774
HindII GTYRAC 2 cut(s) 679, 774
HindIII AAGCTT 3 cut(s) 574, 1409, 1777
HinfI GANTC 7 cut(s) 227, 445, 693, 720, 943, 1154, 1841
HpaII CCGG 4 cut(s) 112, 202, 673, 1425
HphI GGTGA 3 cut(s) 1064, 1541, 1861
Hpy166II GTNNAC 5 cut(s) 679, 774, 1213, 1430, 1580
Hpy188I TCNGA 9 cut(s) 232, 361, 512, 750, 765, 1029, 1159, 1366, 1505
Hpy8I GTNNAC 5 cut(s) 679, 774, 1213, 1430, 1580
HpyAV CCTTC 4 cut(s) 600, 760, 887, 1185
HpyCH4III ACNGT 4 cut(s) 958, 1078, 1306, 1637
Hsp92II CATG 7 cut(s) 619, 709, 1298, 1313, 1563, 1700, 1866
HspAI GCGC 6 cut(s) 196, 270, 341, 842, 1187, 1450
Kpn2I TCCGGA 1 cut(s) 201
KspI CCGCGG 1 cut(s) 10
Kzo9I GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
LmnI GCTCC 3 cut(s) 247, 559, 1240
LweI GCATC 8 cut(s) 207, 523, 752, 1020, 1231, 1270, 1625, 1814
MaeI CTAG 4 cut(s) 209, 497, 1268, 1655
MalI GATC 6 cut(s) 660, 975, 1023, 1568, 1683, 1853
MboI GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
MfeI CAATTG 1 cut(s) 135
MflI RGATCY 1 cut(s) 658
MhlI GDGCHC 3 cut(s) 510, 1432, 1582
MlsI TGGCCA 1 cut(s) 807
MluNI TGGCCA 1 cut(s) 807
MlyI GAGTC 3 cut(s) 454, 702, 729
MmeI TCCRAC 1 cut(s) 1752
Mox20I TGGCCA 1 cut(s) 807
Mph1103I ATGCAT 1 cut(s) 1618
MroI TCCGGA 1 cut(s) 201
MroXI GAANNNNTTC 1 cut(s) 1840
MscI TGGCCA 1 cut(s) 807
MseI TTAA 6 cut(s) 255, 312, 1091, 1194, 1343, 1496
MslI CAYNNNNRTG 1 cut(s) 1050
Msp20I TGGCCA 1 cut(s) 807
MspA1I CMGCKG 4 cut(s) 9, 346, 525, 1000
MspI CCGG 4 cut(s) 112, 202, 673, 1425
MspR9I CCNGG 4 cut(s) 113, 264, 674, 804
MunI CAATTG 1 cut(s) 135
MvaI CCWGG 2 cut(s) 264, 804
MvnI CGCG 2 cut(s) 9, 409
NciI CCSGG 2 cut(s) 113, 674
NdeII GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
NheI GCTAGC 1 cut(s) 1654
NlaIII CATG 7 cut(s) 619, 709, 1298, 1313, 1563, 1700, 1866
NlaIV GGNNCC 1 cut(s) 797
NmeAIII GCCGAG 1 cut(s) 1639
NsbI TGCGCA 2 cut(s) 342, 843
NsiI ATGCAT 1 cut(s) 1618
NspI RCATGY 3 cut(s) 1298, 1700, 1866
OliI CACNNNNGTG 1 cut(s) 1050
PaeR7I CTCGAG 1 cut(s) 1602
PagI TCATGA 1 cut(s) 1309
PceI AGGCCT 1 cut(s) 551
PciI ACATGT 2 cut(s) 1696, 1862
PcsI WCGNNNNNNNCGW 1 cut(s) 852
PdmI GAANNNNTTC 1 cut(s) 1840
PfeI GAWTC 4 cut(s) 227, 943, 1154, 1841
PflMI CCANNNNNTGG 1 cut(s) 792
PfoI TCCNGGA 1 cut(s) 111
PleI GAGTC 3 cut(s) 453, 701, 728
PpsI GAGTC 3 cut(s) 453, 701, 728
PscI ACATGT 2 cut(s) 1696, 1862
PshAI GACNNNNGTC 1 cut(s) 815
Psp124BI GAGCTC 1 cut(s) 510
Psp6I CCWGG 2 cut(s) 262, 802
PspGI CCWGG 2 cut(s) 262, 802
PspN4I GGNNCC 1 cut(s) 797
PspPI GGNCC 1 cut(s) 4
PstNI CAGNNNCTG 1 cut(s) 1370
PsuI RGATCY 1 cut(s) 658
PvuII CAGCTG 2 cut(s) 346, 1000
RsaI GTAC 2 cut(s) 686, 1473
RsaNI GTAC 2 cut(s) 685, 1472
RseI CAYNNNNRTG 1 cut(s) 1050
SacI GAGCTC 1 cut(s) 510
SacII CCGCGG 1 cut(s) 10
SaqAI TTAA 6 cut(s) 255, 312, 1091, 1194, 1343, 1496
Sau3AI GATC 6 cut(s) 658, 973, 1021, 1566, 1681, 1851
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 3 cut(s) 454, 702, 729
ScrFI CCNGG 4 cut(s) 113, 264, 674, 804
SduI GDGCHC 3 cut(s) 510, 1432, 1582
SfaNI GCATC 8 cut(s) 207, 523, 752, 1020, 1231, 1270, 1625, 1814
Sfr274I CTCGAG 1 cut(s) 1602
Sfr303I CCGCGG 1 cut(s) 10
SgrBI CCGCGG 1 cut(s) 10
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 1602
SmiMI CAYNNNNRTG 1 cut(s) 1050
SmlI CTYRAG 6 cut(s) 238, 1250, 1416, 1602, 1649, 1685
SmoI CTYRAG 6 cut(s) 238, 1250, 1416, 1602, 1649, 1685
SseBI AGGCCT 1 cut(s) 551
SsiI CCGC 7 cut(s) 7, 9, 12, 523, 583, 724, 1564
SspMI CTAG 4 cut(s) 209, 497, 1268, 1655
SstI GAGCTC 1 cut(s) 510
StuI AGGCCT 1 cut(s) 551
StyD4I CCNGG 4 cut(s) 111, 262, 672, 802
StyI CCWWGG 1 cut(s) 1512
TaaI ACNGT 4 cut(s) 958, 1078, 1306, 1637
TaqI TCGA 8 cut(s) 187, 426, 819, 1324, 1398, 1466, 1603, 1854
TatI WGTACW 1 cut(s) 1471
TauI GCSGC 2 cut(s) 12, 525
TfiI GAWTC 4 cut(s) 227, 943, 1154, 1841
Tru1I TTAA 6 cut(s) 255, 312, 1091, 1194, 1343, 1496
Tru9I TTAA 6 cut(s) 255, 312, 1091, 1194, 1343, 1496
TscAI CASTG 4 cut(s) 168, 945, 1579, 1591
TspDTI ATGAA 5 cut(s) 632, 722, 767, 1298, 1721
TspGWI ACGGA 1 cut(s) 1853
TspRI CASTG 4 cut(s) 168, 945, 1579, 1591
Van91I CCANNNNNTGG 1 cut(s) 792
VneI GTGCAC 2 cut(s) 1428, 1578
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 4 cut(s) 296, 1262, 1507, 1739
XceI RCATGY 3 cut(s) 1298, 1700, 1866
XhoI CTCGAG 1 cut(s) 1602
XmnI GAANNNNTTC 1 cut(s) 1840
XspI CTAG 4 cut(s) 209, 497, 1268, 1655
Zsp2I ATGCAT 1 cut(s) 1618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.