Rroxscaffold_7G00184270

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0007274
Physical Location & Seq
Forward (+)
23493804 .. 23496846
3043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00184270.1

Sequence Viewer

Length: 1863 bp
ATGGACCGCGGCGGGGACAAGCAGCACCACCAGCAGCTCTCTTTGCCTAAGAGTGCAAGGCAGCAGCAGCACAGATATAACGAATGGATTTTCCGGGATGTTCCAAGTGATATTACAATAGAAGTGAATGGAGGTGCTTTCTCACTGCATAAGTTCCCTCTTGTCTCTCGAAGTGGGCGCATCCGGAAGCTAGTAGCTGAACATAGAGATTCTGATATCTCAAGGGTGGAGCTTCTTAATCTACCAGGAGGCGCTGAAACATTTGAGTTGGCAGCGAAATTCTGTTATGGTATTAACTTTGAAATCACATCAGCAAATGTTGCGCAGCTGTGTTGTATATCCGATTTCCTTGAAATGACTGAAGAGTTCTCAAAAGATAATCTTGGCTCGCGTGCTGAAGAGTATCTCGAAAGCATTGTTTGCAAGAGTCTTGAAATGTGCGTTGAAGTTTTGCAACAATGTGAGACTTTACTTCCTCTAGCTGATGAGCTCAGAGTAATTAGCCGCTGCATAGATGCAATCGCCTCAAAGGCCTGCGTGGAGCAAATTGCTTCAAGCTTCTCCCGCTTGGAGTATAGCAGCTCAGGAAGGCTACACATGAACAGGCAAGCCAAATGTGATGGGGACTGGTGGATAGAAGATCTTTCTGGCCTCCGGGTTGACTTGTACCAAAGAGTCATAACAGCCATGAAGTGTCGTGGAGTCCGCCCCGAGAGTATCGGTGCATCTCTGATGAACTATGCTCAGAAGGAGTTGACAAAGAAGTCCAGCTTATGGAACCCACCTGGCCAGACAAAAGTTGATGTAATTTCAGTTTCAACTGCGCACGAAAAACTCGTGGTTGAAACGATTGTCAGCCTTCTTCCTGTTGAGAAACTTGCTGTTCCAATCAACTTCCTTTTCGGGCTTTTGCGAAGTGCAGTGATTCTTGATTGCACAGTTGCTTGCAGACTTGATCTGGAGAGGAGGATTGGGTCTCAGCTGGATATTGCTTCTCTTGATGATCTTCTGATACCATCTTTCAAGCACTCTGGTGATACTTTGTTTGACGTGGATACGGTGCATAGGATTTTAATTAACTTTTCTCAGCAAGAGGATAGTGAAGAAGAAGAAATGGAAGATGGTTCTGTTTTTGAATCTGATAGTCCTCATTCGCCTTCCCAAACAGCGCTTTTTAAGGTTTCAAAGTTAGTGGACAACTACCTTGCTGAGATTGCTCCTGATGCAAACCTCAAGCTCACTAAATTTCTAGTCATTGCTGATGCTTTGCCTGAACATGCACGAACTGTTCATGATGGGTTATATCGAGCCATAGACATCTATTTAAAAGCCCATCAAGGTTTATCAGATACTGACAAGAAGAAGCTCTGCAAGCTAATCGATTTCCAAAAGCTCTCTCAAGAAGCCGGTGCACACGCTGCACAGAATGAGCGCCTCCCTCTCCAGTCGATAGTACAAGTTCTTTACTTTGAGCAATTAAGGCTCAGAAATTCCTTGGGCTGCTCTAATGGTGAAGACGAACACAAGCCAATGCACCAGTCATGGCGGATCAGCAGTGGTGCACTCAGTGCAGCAATGTCTCCTCGAGACAACTATGCATCATTGAGGCGAGAAAACCGTGAGCTAAAACTTGAGCTAGCTCGGCTACGAATGAGACTAAATGATCTTGAGAGAGAACATGTCTGTATGAAGAGGGATATGGAAAAGTCCAACTCTCGTAAATTTATGAGTTCTTTCTCCAGGAAAATTGGCAAGCTAAGCTTCTTTGGACACAGTTCTTCAAGGGCATCCACTTCTCCATCAAGACAATCATATAGAACGGATTCTAAGGTGATCGAAAGAACATGTGCAAGCATAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

620

Amino Acids

69.98

Weight (kDa)

6.26

Isoelectric Point (pI)

45.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 209 - 469 7.9e-95 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 763
Acc16I TGCGCA 2 cut(s) 324, 825
AccB7I CCANNNNNTGG 1 cut(s) 774
AccII CGCG 2 cut(s) 9, 391
AccIII TCCGGA 1 cut(s) 183
AciI CCGC 7 cut(s) 7, 9, 12, 505, 565, 706, 1546
AclWI GGATC 1 cut(s) 1556
AcoI YGGCCR 1 cut(s) 787
AcsI RAATTY 4 cut(s) 278, 1244, 1489, 1721
AcuI CTGAAG 2 cut(s) 381, 417
AdeI CACNNNGTG 1 cut(s) 1568
AfaI GTAC 2 cut(s) 668, 1455
AfeI AGCGCT 1 cut(s) 1170
AfiI CCNNNNNNNGG 2 cut(s) 13, 774
AflIII ACRYGT 2 cut(s) 1678, 1844
AjiI CACGTC 1 cut(s) 1051
AjnI CCWGG 3 cut(s) 244, 784, 1739
AleI CACNNNNGTG 1 cut(s) 1032
Alw21I GWGCWC 3 cut(s) 492, 1414, 1564
Alw26I GTCTC 6 cut(s) 169, 458, 981, 1581, 1584, 1648
Alw44I GTGCAC 2 cut(s) 1410, 1560
AlwI GGATC 1 cut(s) 1556
AlwNI CAGNNNCTG 1 cut(s) 1352
Ama87I CYCGRG 2 cut(s) 710, 1584
Aor13HI TCCGGA 1 cut(s) 183
Aor51HI AGCGCT 1 cut(s) 1170
AoxI GGCC 3 cut(s) 531, 649, 787
ApaLI GTGCAC 2 cut(s) 1410, 1560
ApoI RAATTY 4 cut(s) 278, 1244, 1489, 1721
Asp700I GAANNNNTTC 1 cut(s) 1822
AspLEI GCGC 6 cut(s) 180, 254, 325, 826, 1171, 1434
AspS9I GGNCC 1 cut(s) 4
AsuC2I CCSGG 2 cut(s) 95, 656
AsuHPI GGTGA 3 cut(s) 1046, 1523, 1843
AsuNHI GCTAGC 1 cut(s) 1636
AvaI CYCGRG 2 cut(s) 710, 1584
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 2 cut(s) 1414, 1564
BalI TGGCCA 1 cut(s) 789
BanII GRGCYC 1 cut(s) 492
BauI CACGAG 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 1521
Bbv12I GWGCWC 3 cut(s) 492, 1414, 1564
BccI CCATC 6 cut(s) 614, 1024, 1115, 1289, 1341, 1807
BcgI CGANNNNNNTGC 2 cut(s) 1360, 1394
BciT130I CCWGG 3 cut(s) 246, 786, 1741
BciVI GTATCC 1 cut(s) 1048
BcnI CCSGG 2 cut(s) 95, 656
BcoDI GTCTC 6 cut(s) 169, 458, 981, 1581, 1584, 1648
BfaI CTAG 4 cut(s) 191, 479, 1250, 1637
BfoI RGCGCY 3 cut(s) 255, 1172, 1435
BfuI GTATCC 1 cut(s) 1048
BglI GCCNNNNNGGC 1 cut(s) 530
BglII AGATCT 1 cut(s) 640
BlpI GCTNAGC 1 cut(s) 1757
Bme1390I CCNGG 5 cut(s) 95, 246, 656, 786, 1741
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 2 cut(s) 710, 1584
BmgBI CACGTC 1 cut(s) 1051
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 1 cut(s) 779
BmrFI CCNGG 5 cut(s) 95, 246, 656, 786, 1741
BmsI GCATC 7 cut(s) 189, 505, 734, 1213, 1252, 1607, 1796
BmtI GCTAGC 1 cut(s) 1640
BpiI GAAGAC 1 cut(s) 1521
BpmI CTGGAG 3 cut(s) 980, 1427, 1723
Bpu10I CCTNAGC 1 cut(s) 583
Bpu1102I GCTNAGC 1 cut(s) 1757
BpuEI CTTGAG 5 cut(s) 205, 1217, 1383, 1652, 1688
BpuMI CCSGG 2 cut(s) 95, 656
Bsa29I ATCGAT 1 cut(s) 1380
BsaI GGTCTC 1 cut(s) 981
BsaJI CCNNGG 2 cut(s) 7, 1494
BsaWI WCCGGW 1 cut(s) 183
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 774
Bse118I RCCGGY 1 cut(s) 1406
Bse1I ACTGG 3 cut(s) 632, 1444, 1537
Bse3DI GCAATG 2 cut(s) 1254, 1581
BseAI TCCGGA 1 cut(s) 183
BseBI CCWGG 3 cut(s) 246, 786, 1741
BseCI ATCGAT 1 cut(s) 1380
BseDI CCNNGG 2 cut(s) 7, 1494
BseGI GGATG 3 cut(s) 103, 180, 1787
BseLI CCNNNNNNNGG 2 cut(s) 13, 774
BseMI GCAATG 2 cut(s) 1254, 1581
BseMII CTCAG 8 cut(s) 505, 597, 758, 992, 1100, 1200, 1498, 1579
BseNI ACTGG 3 cut(s) 632, 1444, 1537
BseRI GAGGAG 2 cut(s) 979, 1572
BseSI GKGCMC 2 cut(s) 1414, 1564
BsgI GTGCAG 3 cut(s) 939, 1404, 1590
Bsh1236I CGCG 2 cut(s) 9, 391
BshFI GGCC 3 cut(s) 533, 651, 789
BshVI ATCGAT 1 cut(s) 1380
BsiHKAI GWGCWC 3 cut(s) 492, 1414, 1564
BsiHKCI CYCGRG 2 cut(s) 710, 1584
BsiSI CCGG 4 cut(s) 94, 184, 655, 1407
BslFI GGGAC 2 cut(s) 29, 638
BslI CCNNNNNNNGG 2 cut(s) 13, 774
BsmAI GTCTC 6 cut(s) 169, 458, 981, 1581, 1584, 1648
BsmFI GGGAC 2 cut(s) 29, 638
BsnI GGCC 3 cut(s) 533, 651, 789
Bso31I GGTCTC 1 cut(s) 981
BsoBI CYCGRG 2 cut(s) 710, 1584
Bsp1286I GDGCHC 3 cut(s) 492, 1414, 1564
Bsp13I TCCGGA 1 cut(s) 183
Bsp143I GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
Bsp1720I GCTNAGC 1 cut(s) 1757
BspACI CCGC 7 cut(s) 7, 9, 12, 505, 565, 706, 1546
BspANI GGCC 3 cut(s) 533, 651, 789
BspCNI CTCAG 8 cut(s) 504, 596, 757, 991, 1099, 1201, 1497, 1578
BspDI ATCGAT 1 cut(s) 1380
BspEI TCCGGA 1 cut(s) 183
BspFNI CGCG 2 cut(s) 9, 391
BspHI TCATGA 1 cut(s) 1291
BspLI GGNNCC 1 cut(s) 779
BspOI GCTAGC 1 cut(s) 1640
BspPI GGATC 1 cut(s) 1556
BspTNI GGTCTC 1 cut(s) 981
BsrDI GCAATG 2 cut(s) 1254, 1581
BsrFI RCCGGY 1 cut(s) 1406
BsrI ACTGG 3 cut(s) 632, 1444, 1537
BssAI RCCGGY 1 cut(s) 1406
BssECI CCNNGG 2 cut(s) 7, 1494
BssMI GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
BssSI CACGAG 1 cut(s) 836
BssT1I CCWWGG 1 cut(s) 1494
Bst2BI CACGAG 1 cut(s) 836
Bst2UI CCWGG 3 cut(s) 246, 786, 1741
Bst4CI ACNGT 5 cut(s) 940, 1060, 1288, 1619, 1775
Bst6I CTCTTC 3 cut(s) 357, 393, 1685
BstAPI GCANNNNNTGC 4 cut(s) 320, 420, 1418, 1568
BstC8I GCNNGC 9 cut(s) 389, 393, 535, 609, 946, 1373, 1638, 1754, 1852
BstDSI CCRYGG 1 cut(s) 7
BstF5I GGATG 3 cut(s) 103, 180, 1787
BstFNI CGCG 2 cut(s) 9, 391
BstH2I RGCGCY 3 cut(s) 255, 1172, 1435
BstHHI GCGC 6 cut(s) 180, 254, 325, 826, 1171, 1434
BstKTI GATC 6 cut(s) 643, 958, 1006, 1551, 1666, 1836
BstMAI GTCTC 6 cut(s) 169, 458, 981, 1581, 1584, 1648
BstMBI GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
BstNI CCWGG 3 cut(s) 246, 786, 1741
BstNSI RCATGY 3 cut(s) 1280, 1682, 1848
BstSCI CCNGG 5 cut(s) 93, 244, 654, 784, 1739
BstSLI GKGCMC 2 cut(s) 1414, 1564
BstUI CGCG 2 cut(s) 9, 391
BstV2I GAAGAC 1 cut(s) 1521
BstX2I RGATCY 1 cut(s) 640
BstYI RGATCY 1 cut(s) 640
Bsu15I ATCGAT 1 cut(s) 1380
BsuI GTATCC 1 cut(s) 1048
BsuRI GGCC 3 cut(s) 533, 651, 789
BsuTUI ATCGAT 1 cut(s) 1380
BtgI CCRYGG 1 cut(s) 7
BtrI CACGTC 1 cut(s) 1051
BtsCI GGATG 3 cut(s) 103, 180, 1787
BtsI GCAGTG 3 cut(s) 143, 927, 1561
BtsIMutI CAGTG 4 cut(s) 143, 927, 1561, 1573
Cac8I GCNNGC 9 cut(s) 389, 393, 535, 609, 946, 1373, 1638, 1754, 1852
CaiI CAGNNNCTG 1 cut(s) 1352
CciI TCATGA 1 cut(s) 1291
CfoI GCGC 6 cut(s) 180, 254, 325, 826, 1171, 1434
Cfr10I RCCGGY 1 cut(s) 1406
Cfr13I GGNCC 1 cut(s) 4
Cfr42I CCGCGG 1 cut(s) 10
ClaI ATCGAT 1 cut(s) 1380
Csp6I GTAC 2 cut(s) 667, 1454
CspCI CAANNNNNGTGG 2 cut(s) 1173, 1208
CviAII CATG 7 cut(s) 598, 688, 1277, 1292, 1542, 1679, 1845
CviQI GTAC 2 cut(s) 667, 1454
DpnI GATC 6 cut(s) 642, 957, 1005, 1550, 1665, 1835
DpnII GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
DraI TTTAAA 1 cut(s) 1326
DraIII CACNNNGTG 1 cut(s) 1568
DrdI GACNNNNNNGTC 1 cut(s) 763
DseDI GACNNNNNNGTC 1 cut(s) 763
EaeI YGGCCR 1 cut(s) 787
Eam1104I CTCTTC 3 cut(s) 357, 393, 1685
EarI CTCTTC 3 cut(s) 357, 393, 1685
EciI GGCGGA 2 cut(s) 695, 1561
Ecl136II GAGCTC 1 cut(s) 490
Eco130I CCWWGG 1 cut(s) 1494
Eco147I AGGCCT 1 cut(s) 533
Eco24I GRGCYC 1 cut(s) 492
Eco31I GGTCTC 1 cut(s) 981
Eco32I GATATC 1 cut(s) 217
Eco47I GGWCC 1 cut(s) 4
Eco47III AGCGCT 1 cut(s) 1170
Eco53kI GAGCTC 1 cut(s) 490
Eco57I CTGAAG 2 cut(s) 381, 417
Eco88I CYCGRG 2 cut(s) 710, 1584
EcoICRI GAGCTC 1 cut(s) 490
EcoRII CCWGG 3 cut(s) 244, 784, 1739
EcoRV GATATC 1 cut(s) 217
EcoT14I CCWWGG 1 cut(s) 1494
EcoT22I ATGCAT 1 cut(s) 1600
EcoT38I GRGCYC 1 cut(s) 492
ErhI CCWWGG 1 cut(s) 1494
FaeI CATG 7 cut(s) 601, 691, 1280, 1295, 1545, 1682, 1848
FalI AAGNNNNNCTT 6 cut(s) 366, 398, 755, 787, 1745, 1777
FaqI GGGAC 2 cut(s) 29, 638
FatI CATG 7 cut(s) 597, 687, 1276, 1291, 1541, 1678, 1844
FauI CCCGC 2 cut(s) 5, 572
FokI GGATG 3 cut(s) 110, 167, 1774
FriOI GRGCYC 1 cut(s) 492
FspBI CTAG 4 cut(s) 191, 479, 1250, 1637
FspI TGCGCA 2 cut(s) 324, 825
GlaI GCGC 6 cut(s) 179, 253, 324, 825, 1170, 1433
GsuI CTGGAG 3 cut(s) 980, 1427, 1723
HaeII RGCGCY 3 cut(s) 255, 1172, 1435
HaeIII GGCC 3 cut(s) 533, 651, 789
HapII CCGG 4 cut(s) 94, 184, 655, 1407
HhaI GCGC 6 cut(s) 180, 254, 325, 826, 1171, 1434
Hin1II CATG 7 cut(s) 601, 691, 1280, 1295, 1545, 1682, 1848
Hin6I GCGC 6 cut(s) 178, 252, 323, 824, 1169, 1432
HinP1I GCGC 6 cut(s) 178, 252, 323, 824, 1169, 1432
HincII GTYRAC 2 cut(s) 661, 756
HindII GTYRAC 2 cut(s) 661, 756
HindIII AAGCTT 2 cut(s) 556, 1759
HinfI GANTC 7 cut(s) 209, 427, 675, 702, 925, 1136, 1823
HpaII CCGG 4 cut(s) 94, 184, 655, 1407
HphI GGTGA 3 cut(s) 1046, 1523, 1843
Hpy166II GTNNAC 5 cut(s) 661, 756, 1195, 1412, 1562
Hpy188I TCNGA 9 cut(s) 214, 343, 494, 732, 747, 1011, 1141, 1348, 1487
Hpy8I GTNNAC 5 cut(s) 661, 756, 1195, 1412, 1562
HpyAV CCTTC 4 cut(s) 582, 742, 869, 1167
HpyCH4III ACNGT 5 cut(s) 940, 1060, 1288, 1619, 1775
HpyCH4IV ACGT 1 cut(s) 1050
HpySE526I ACGT 1 cut(s) 1050
Hsp92II CATG 7 cut(s) 601, 691, 1280, 1295, 1545, 1682, 1848
HspAI GCGC 6 cut(s) 178, 252, 323, 824, 1169, 1432
Kpn2I TCCGGA 1 cut(s) 183
KspI CCGCGG 1 cut(s) 10
Kzo9I GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
LmnI GCTCC 3 cut(s) 229, 541, 1222
LweI GCATC 7 cut(s) 189, 505, 734, 1213, 1252, 1607, 1796
MaeI CTAG 4 cut(s) 191, 479, 1250, 1637
MaeII ACGT 1 cut(s) 1050
MalI GATC 6 cut(s) 642, 957, 1005, 1550, 1665, 1835
MboI GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
MflI RGATCY 1 cut(s) 640
MhlI GDGCHC 3 cut(s) 492, 1414, 1564
MlsI TGGCCA 1 cut(s) 789
MluNI TGGCCA 1 cut(s) 789
MlyI GAGTC 3 cut(s) 436, 684, 711
MmeI TCCRAC 1 cut(s) 1734
Mox20I TGGCCA 1 cut(s) 789
Mph1103I ATGCAT 1 cut(s) 1600
MroI TCCGGA 1 cut(s) 183
MroXI GAANNNNTTC 1 cut(s) 1822
MscI TGGCCA 1 cut(s) 789
MseI TTAA 7 cut(s) 237, 294, 1073, 1077, 1176, 1325, 1478
MslI CAYNNNNRTG 1 cut(s) 1032
Msp20I TGGCCA 1 cut(s) 789
MspA1I CMGCKG 4 cut(s) 9, 328, 507, 982
MspI CCGG 4 cut(s) 94, 184, 655, 1407
MspR9I CCNGG 5 cut(s) 95, 246, 656, 786, 1741
MvaI CCWGG 3 cut(s) 246, 786, 1741
MvnI CGCG 2 cut(s) 9, 391
NciI CCSGG 2 cut(s) 95, 656
NdeII GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
NheI GCTAGC 1 cut(s) 1636
NlaIII CATG 7 cut(s) 601, 691, 1280, 1295, 1545, 1682, 1848
NlaIV GGNNCC 1 cut(s) 779
NmeAIII GCCGAG 1 cut(s) 1621
NsbI TGCGCA 2 cut(s) 324, 825
NsiI ATGCAT 1 cut(s) 1600
NspI RCATGY 3 cut(s) 1280, 1682, 1848
OliI CACNNNNGTG 1 cut(s) 1032
PacI TTAATTAA 1 cut(s) 1077
PaeR7I CTCGAG 1 cut(s) 1584
PagI TCATGA 1 cut(s) 1291
PceI AGGCCT 1 cut(s) 533
PciI ACATGT 2 cut(s) 1678, 1844
PcsI WCGNNNNNNNCGW 1 cut(s) 834
PdmI GAANNNNTTC 1 cut(s) 1822
PfeI GAWTC 4 cut(s) 209, 925, 1136, 1823
PflMI CCANNNNNTGG 1 cut(s) 774
PfoI TCCNGGA 2 cut(s) 93, 1739
PleI GAGTC 3 cut(s) 435, 683, 710
PpsI GAGTC 3 cut(s) 435, 683, 710
PscI ACATGT 2 cut(s) 1678, 1844
Psp124BI GAGCTC 1 cut(s) 492
Psp6I CCWGG 3 cut(s) 244, 784, 1739
PspGI CCWGG 3 cut(s) 244, 784, 1739
PspN4I GGNNCC 1 cut(s) 779
PspPI GGNCC 1 cut(s) 4
PstNI CAGNNNCTG 1 cut(s) 1352
PsuI RGATCY 1 cut(s) 640
PvuII CAGCTG 2 cut(s) 328, 982
RsaI GTAC 2 cut(s) 668, 1455
RsaNI GTAC 2 cut(s) 667, 1454
RseI CAYNNNNRTG 1 cut(s) 1032
SacI GAGCTC 1 cut(s) 492
SacII CCGCGG 1 cut(s) 10
SaqAI TTAA 7 cut(s) 237, 294, 1073, 1077, 1176, 1325, 1478
Sau3AI GATC 6 cut(s) 640, 955, 1003, 1548, 1663, 1833
Sau96I GGNCC 1 cut(s) 4
SchI GAGTC 3 cut(s) 436, 684, 711
ScrFI CCNGG 5 cut(s) 95, 246, 656, 786, 1741
SduI GDGCHC 3 cut(s) 492, 1414, 1564
SfaNI GCATC 7 cut(s) 189, 505, 734, 1213, 1252, 1607, 1796
Sfr274I CTCGAG 1 cut(s) 1584
Sfr303I CCGCGG 1 cut(s) 10
SgrBI CCGCGG 1 cut(s) 10
SinI GGWCC 1 cut(s) 4
SlaI CTCGAG 1 cut(s) 1584
SmiMI CAYNNNNRTG 1 cut(s) 1032
SmlI CTYRAG 6 cut(s) 220, 1232, 1398, 1584, 1631, 1667
SmoI CTYRAG 6 cut(s) 220, 1232, 1398, 1584, 1631, 1667
SseBI AGGCCT 1 cut(s) 533
SsiI CCGC 7 cut(s) 7, 9, 12, 505, 565, 706, 1546
SspMI CTAG 4 cut(s) 191, 479, 1250, 1637
SstI GAGCTC 1 cut(s) 492
StuI AGGCCT 1 cut(s) 533
StyD4I CCNGG 5 cut(s) 93, 244, 654, 784, 1739
StyI CCWWGG 1 cut(s) 1494
TaaI ACNGT 5 cut(s) 940, 1060, 1288, 1619, 1775
TaiI ACGT 1 cut(s) 1053
TaqI TCGA 7 cut(s) 169, 408, 1306, 1380, 1448, 1585, 1836
TatI WGTACW 1 cut(s) 1453
TauI GCSGC 2 cut(s) 12, 507
TfiI GAWTC 4 cut(s) 209, 925, 1136, 1823
Tru1I TTAA 7 cut(s) 237, 294, 1073, 1077, 1176, 1325, 1478
Tru9I TTAA 7 cut(s) 237, 294, 1073, 1077, 1176, 1325, 1478
TscAI CASTG 4 cut(s) 150, 927, 1561, 1573
TspDTI ATGAA 5 cut(s) 614, 704, 749, 1280, 1703
TspGWI ACGGA 1 cut(s) 1835
TspRI CASTG 4 cut(s) 150, 927, 1561, 1573
Van91I CCANNNNNTGG 1 cut(s) 774
VneI GTGCAC 2 cut(s) 1410, 1560
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 4 cut(s) 278, 1244, 1489, 1721
XceI RCATGY 3 cut(s) 1280, 1682, 1848
XhoI CTCGAG 1 cut(s) 1584
XmnI GAANNNNTTC 1 cut(s) 1822
XspI CTAG 4 cut(s) 191, 479, 1250, 1637
Zsp2I ATGCAT 1 cut(s) 1600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.